CsaV3_3G037560.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G037560.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Embryo defective
Location	chr3: 30986672 .. 30989842 (+)
Sequence length	480
RNA-Seq Expression	CsaV3_3G037560.1
Synteny	CsaV3_3G037560.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGATCGTTCCTCTCTGTTGTTCACTGCCGTCAAGCTTGCCTCTCCAGTTCGTACTTGCATGAAATGGTGTATTATAAGTGAGCAAATCTCTTGCAGGAATGAAGGCGAAGATTGTTTTGAGGAAGATTTATGATTACGTTCGGTATGATTTGAAGGAAATTGCATTTCCCTCGTCTTTGCCGGATCCTCCACATATAAAGAAGCGTGGAAAGCTTTCATGGAATGAACGATTCCTGGTATATTCTTATTCTCTGGATGTTCTCATTTTCTTTTGTAGGTTTTGCTATAACTTCTAATTTGTGATTGAGGGGACAAGTTTGTAGCGACAGGATTGACTTACATAGAACAATTCAAAATTTGATTCTGCTCTTATTATGTGTGTTTCTTCTGTTCTTCTACTGTTCATAAGTATGTTTTATCGGATGGTGAGTTTAGGTGTTGAAGGAGGCTTCCAGGTTATATGCTGCAAGCTGGGTGCGGGACATTGGTCCTGAACTGCGACCATATGACTATAAGGTGAAAGAAAGCGAAAACAAACCAAATTCACCAAAACGTGCGCCTAAAGAGAAAGAACCTTCAACACTTGAAGACCTAGGTAACCGACCTTTGTGTTATTGTTTGATTCAGATGCTTTATACGGAAATGAAATATTTTCTCGTACCTGTGATTGTGTATTCAAAATCCTTATACACTTCTAGATGGACTGCTAATTGATTTTTAGTTCGAACATGGTTTTCAATGCAATAGTAAATGGTGTATTTTGTTTACCGATTTCTGGTTCCTGGTCAACGAAACCCGTTGATGCATATGATAGAATTGCTTCAGGCTCAAGTAGTGCTCAATGTTGAAATATTCCTTAATATTTAATGCTTGTGAAAGAAATAGTGATAGGTAATGCTTGCCGGTTTTGTAAACTTGTCATGCATGTAGTGCTATCGATGGAATTAGCTGAAGATGTGAACAAAATGGTCAAATGTACTCAATATTCTAGGGGAAGGGTCTAGTCCTTGTTTAAAGTTTGAAATGGGATTGTGTTTGCATAGAGGATGATATCCAACAATGAATCCTTAGTATAGAATGAGCAACCTAGTAACATCAATCCTTCGTATAGAATTGGCAGCCTTGTGTAATAAATTTTCCTTCTTTTGATGGATTTCTCTCCATACATCCCCATTTCCATCACAATAACTCTTTTTTGGACTACGGCATGTCTTGTTGTTTCTCCTCCCACTTTCCTTCCTTTATCATCGACTACAAGACCTTCACTACTGTTCTTGATCATTTGTCTCCTGTTATCTCTTCAGTCCTCCCCATCCACTCTTTTTCACAAGTTTCCCTTTCCCAAATCCAAACAAGAAAGGGAGCGTGGATTTCAGCTCCATGATCCTCTATTCTTTCTATGGGAACACACTCAATGCTACCCAATTCACAGCACCTTTCTCAGCATCCAAAGAAGAATCAATCTTGGTTAATACTTGTATGGTATCCAGTTTAGTCAGGCTCCCTATTTTGGAAAGCCAAAGGCTGAAGAAGCAATTGTAGACAAATGGGATTAGGCTTAAGGTAAAAGGGATTTTTAGGGCCGGGTCTAATTTTGGTAGTCTGCTGCAAAACTCTTATTGGGTACACAGTAATTGCAGTTTGATTGTTGGTGGCCCTCCTAGTAGGGTTCTAATCAGAAGTAAATGTAGAAAAAAACATTGGGACCTCATTTAAAAGCACTATCATGCCTATGTATCTGATTATCTGGTGTAATTTGGTTGTTCGTTTCTTTTTCTATTTGAAGGATTTGCATAAGTTTTCTAGCTTCTTGTCAAATAAAATAACACTAAAATAGCTGATTTTTTTCTCTTATGTTGCAATTTGATTTTCTATCTGTGTTATTTTACTTTTAACCGTTTATTATATTCTTTTCTGGTATTGATTGAATTGTATTATTCCTGATTAGATTGCCATTTTTCTTCTGTTGCAAAATTAAAAATCCAGCTGTGGCTGCAAGAGGAGGAATGGAGACATTAAAACCAGCTTTGCAGCGGGTGTATATGACTAGAGCTTCTGCATATAGAGACGCTCTAAAAAATTTTATAGATGGGTATCAAGAAGGTATTCAGCAAGTCATGGAGAAAAAGAACGCTTCTGATTCCCAAAAGGGAAGTGATAAAATCTAATAAGAGCTGCAGAACTGTGACTAAAATAATTTAGAGGACTGGGTGGCTCAGTTTCCGTTTGTAAAAATTGGTTGAGTTGAGATTTTTAGTGTATTTTTCGCCAGTGCATTTTGAACTATATACAGTTTTGAGCATCTTCTAAATATACACAAACAGTCATGAGAAAGGATGCCAAATTAAACCCTTTTGCTTTCTGCAGAACCAGTTGCAGGGTTCCTATGTTTGTTTTCCTCTATTAGTCTCAGTTATCTTAGTGACTGTTAAGTATTTTCTTACAAGTAGGCATGGAAATAGTAGTATGAATGACGAAGCTGCTTTTGTCTGCTAAATGAATAATTCAGTAGTTCTTTTCTTTCGTCTTTGGCCTTTTCGAGATGTGGATTCAAGCTTATTCCCCACACATTTGAGAAATGTGTCAAATTAGCAAAGATCAGAGGGAAATAACTCCAGCTCCCGTAAGGTTTGGTTTACCGTTTGTTTCAAGTTGATAACTTTTCCTCGACACTTCAGATGTGAATTCTATTGCAGCTGGCCACTGCGTTCACATAAAGATCACTCCGGATTTTCAATCATGTCTTCAGGTATCTGCATGGTGGATTGAATTTACAGTACAACCATAACTCTATGATTTGACAACAAAGAGTTGGATGTTGAATTTGCAAATTGAGATAGAAAGTAGTGGCATTGTTAGGTCAAAAGATGTTGCGGAAAGGAAATGCTCAAGTACGCTTTATTATGGTGAGAGGGAAGGCTGAAAATGACTGGCATTATGGGGTTTGAAGGGCCCATTTAGAATTGGGTTCTTGCTATTAGCAGATTAGCTCCCAATGTTCGAGCTACCATTTGACTTTTTTGGAAGCCTGAATTGTTGAAAGCAAATGAGGTACCAATTGCTCCATATTTTATATGCTCTTTTTGGGACTACGACTACAATTATTAAAAAAGGATCAATACTCAATAGTGAAGTTGCTCGATCTCATGTATACTGTTTAGTTCCATGC

mRNA sequence

ATGAAGGCGAAGATTGTTTTGAGGAAGATTTATGATTACGTTCGGTATGATTTGAAGGAAATTGCATTTCCCTCGTCTTTGCCGGATCCTCCACATATAAAGAAGCGTGGAAAGCTTTCATGGAATGAACGATTCCTGGTGTTGAAGGAGGCTTCCAGGTTATATGCTGCAAGCTGGGTGCGGGACATTGGTCCTGAACTGCGACCATATGACTATAAGGTGAAAGAAAGCGAAAACAAACCAAATTCACCAAAACGTGCGCCTAAAGAGAAAGAACCTTCAACACTTGAAGACCTAGCTGTGGCTGCAAGAGGAGGAATGGAGACATTAAAACCAGCTTTGCAGCGGGTGTATATGACTAGAGCTTCTGCATATAGAGACGCTCTAAAAAATTTTATAGATGGGTATCAAGAAGGTATTCAGCAAGTCATGGAGAAAAAGAACGCTTCTGATTCCCAAAAGGGAAGTGATAAAATCTAA

Coding sequence (CDS)

ATGAAGGCGAAGATTGTTTTGAGGAAGATTTATGATTACGTTCGGTATGATTTGAAGGAAATTGCATTTCCCTCGTCTTTGCCGGATCCTCCACATATAAAGAAGCGTGGAAAGCTTTCATGGAATGAACGATTCCTGGTGTTGAAGGAGGCTTCCAGGTTATATGCTGCAAGCTGGGTGCGGGACATTGGTCCTGAACTGCGACCATATGACTATAAGGTGAAAGAAAGCGAAAACAAACCAAATTCACCAAAACGTGCGCCTAAAGAGAAAGAACCTTCAACACTTGAAGACCTAGCTGTGGCTGCAAGAGGAGGAATGGAGACATTAAAACCAGCTTTGCAGCGGGTGTATATGACTAGAGCTTCTGCATATAGAGACGCTCTAAAAAATTTTATAGATGGGTATCAAGAAGGTATTCAGCAAGTCATGGAGAAAAAGAACGCTTCTGATTCCCAAAAGGGAAGTGATAAAATCTAA

Protein sequence

MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWVRDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKNASDSQKGSDKI*

Homology

[Close]

BLAST of CsaV3_3G037560.1 vs. NCBI nr
Match: XP_004136494.1 (uncharacterized protein LOC101202894 [Cucumis sativus] >KGN59162.1 hypothetical protein Csa_001981 [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 1.6e-82
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWV 60
           MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWV
Sbjct: 1   MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120
           RDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120

Query: 121 RASAYRDALKNFIDGYQEGIQQVMEKKNASDSQKGSDKI 160
           RASAYRDALKNFIDGYQEGIQQVMEKKNASDSQKGSDKI
Sbjct: 121 RASAYRDALKNFIDGYQEGIQQVMEKKNASDSQKGSDKI 159

[Close]

BLAST of CsaV3_3G037560.1 vs. NCBI nr
Match: XP_008442875.1 (PREDICTED: uncharacterized protein LOC103486641 [Cucumis melo])

HSP 1 Score: 291.2 bits (744), Expect = 5.5e-75
Identity = 145/159 (91.19%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWV 60
           MKAKIV RKIYDYVRYDLKEIAFPSSLPDPPH+KKR KL+W++RFLVLKEASRLYAASWV
Sbjct: 1   MKAKIVFRKIYDYVRYDLKEIAFPSSLPDPPHVKKRPKLTWHDRFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120
           RDIGPELRP++YKV+ESENK NSPK APKEKEPSTLEDLAVAARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPELRPHEYKVEESENKTNSPKSAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120

Query: 121 RASAYRDALKNFIDGYQEGIQQVMEKKNASDSQKGSDKI 160
           RA+AYRDALK FIDGYQEGIQQVMEKK+ASDSQKGSDKI
Sbjct: 121 RAAAYRDALKKFIDGYQEGIQQVMEKKDASDSQKGSDKI 159

[Close]

BLAST of CsaV3_3G037560.1 vs. NCBI nr
Match: XP_023522298.1 (uncharacterized protein LOC111786187 [Cucurbita pepo subsp. pepo] >XP_023528947.1 uncharacterized protein LOC111791710 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285.0 bits (728), Expect = 3.9e-73
Identity = 144/159 (90.57%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWV 60
           MKA+IVLRKIYDYVRYDLKEIAFPSSLPDPPH KKR KL+W+ERFLVLKEASRLYAASWV
Sbjct: 1   MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWHERFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120
           RDIGPELRP DYKV+ESENK NS K APKEKEPSTLEDLAVAARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120

Query: 121 RASAYRDALKNFIDGYQEGIQQVMEKKNASDSQKGSDKI 160
           +ASAYRDALKNFIDGYQEGIQQVMEKK  SDSQKGS+K+
Sbjct: 121 KASAYRDALKNFIDGYQEGIQQVMEKKEISDSQKGSEKM 159

[Close]

BLAST of CsaV3_3G037560.1 vs. NCBI nr
Match: KAA0043851.1 (uncharacterized protein E6C27_scaffold236G001860 [Cucumis melo var. makuwa] >TYK25283.1 uncharacterized protein E5676_scaffold352G004180 [Cucumis melo var. makuwa])

HSP 1 Score: 284.3 bits (726), Expect = 6.7e-73
Identity = 141/156 (90.38%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWV 60
           MKAKIV RKIYDYVRYDLKEIAFPSSLPDPPH+KKR KL+W++RFLVLKEASRLYAASWV
Sbjct: 1   MKAKIVFRKIYDYVRYDLKEIAFPSSLPDPPHVKKRPKLTWHDRFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120
           RDIGPELRP++YKV+ESENK NSPK APKEKEPSTLEDLAVAARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPELRPHEYKVEESENKTNSPKSAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120

Query: 121 RASAYRDALKNFIDGYQEGIQQVMEKKNASDSQKGS 157
           RA+AYRDALK FIDGYQEGIQQVMEKK+ASDSQKG+
Sbjct: 121 RAAAYRDALKKFIDGYQEGIQQVMEKKDASDSQKGN 156

[Close]

BLAST of CsaV3_3G037560.1 vs. NCBI nr
Match: XP_022144745.1 (uncharacterized protein LOC111014361 [Momordica charantia] >XP_022144746.1 uncharacterized protein LOC111014361 [Momordica charantia])

HSP 1 Score: 284.3 bits (726), Expect = 6.7e-73
Identity = 141/159 (88.68%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWV 60
           MK +IVLRK+YDY+RYDLKEIAFPSSLPDPPH+KKR KL+W+ERFLVLKEASRLYAASWV
Sbjct: 1   MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120
           RDIGP+LRP DYKV+ESENK N+ K A KEKEPSTLEDLAVAARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120

Query: 121 RASAYRDALKNFIDGYQEGIQQVMEKKNASDSQKGSDKI 160
           RASAYRDALKNFIDGYQEG+QQVMEKK ASDSQKGSDKI
Sbjct: 121 RASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI 159

[Close]

BLAST of CsaV3_3G037560.1 vs. ExPASy TrEMBL
Match: A0A0A0LEN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778190 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 7.7e-83
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWV 60
           MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWV
Sbjct: 1   MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120
           RDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120

Query: 121 RASAYRDALKNFIDGYQEGIQQVMEKKNASDSQKGSDKI 160
           RASAYRDALKNFIDGYQEGIQQVMEKKNASDSQKGSDKI
Sbjct: 121 RASAYRDALKNFIDGYQEGIQQVMEKKNASDSQKGSDKI 159

[Close]

BLAST of CsaV3_3G037560.1 vs. ExPASy TrEMBL
Match: A0A1S3B6Q8 (uncharacterized protein LOC103486641 OS=Cucumis melo OX=3656 GN=LOC103486641 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.6e-75
Identity = 145/159 (91.19%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWV 60
           MKAKIV RKIYDYVRYDLKEIAFPSSLPDPPH+KKR KL+W++RFLVLKEASRLYAASWV
Sbjct: 1   MKAKIVFRKIYDYVRYDLKEIAFPSSLPDPPHVKKRPKLTWHDRFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120
           RDIGPELRP++YKV+ESENK NSPK APKEKEPSTLEDLAVAARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPELRPHEYKVEESENKTNSPKSAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120

Query: 121 RASAYRDALKNFIDGYQEGIQQVMEKKNASDSQKGSDKI 160
           RA+AYRDALK FIDGYQEGIQQVMEKK+ASDSQKGSDKI
Sbjct: 121 RAAAYRDALKKFIDGYQEGIQQVMEKKDASDSQKGSDKI 159

[Close]

BLAST of CsaV3_3G037560.1 vs. ExPASy TrEMBL
Match: A0A6J1CSI2 (uncharacterized protein LOC111014361 OS=Momordica charantia OX=3673 GN=LOC111014361 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.2e-73
Identity = 141/159 (88.68%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWV 60
           MK +IVLRK+YDY+RYDLKEIAFPSSLPDPPH+KKR KL+W+ERFLVLKEASRLYAASWV
Sbjct: 1   MKTRIVLRKLYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120
           RDIGP+LRP DYKV+ESENK N+ K A KEKEPSTLEDLAVAARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPDLRPNDYKVEESENKTNAAKSASKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120

Query: 121 RASAYRDALKNFIDGYQEGIQQVMEKKNASDSQKGSDKI 160
           RASAYRDALKNFIDGYQEG+QQVMEKK ASDSQKGSDKI
Sbjct: 121 RASAYRDALKNFIDGYQEGVQQVMEKKEASDSQKGSDKI 159

[Close]

BLAST of CsaV3_3G037560.1 vs. ExPASy TrEMBL
Match: A0A5D3DNS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004180 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.2e-73
Identity = 141/156 (90.38%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWV 60
           MKAKIV RKIYDYVRYDLKEIAFPSSLPDPPH+KKR KL+W++RFLVLKEASRLYAASWV
Sbjct: 1   MKAKIVFRKIYDYVRYDLKEIAFPSSLPDPPHVKKRPKLTWHDRFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120
           RDIGPELRP++YKV+ESENK NSPK APKEKEPSTLEDLAVAARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPELRPHEYKVEESENKTNSPKSAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120

Query: 121 RASAYRDALKNFIDGYQEGIQQVMEKKNASDSQKGS 157
           RA+AYRDALK FIDGYQEGIQQVMEKK+ASDSQKG+
Sbjct: 121 RAAAYRDALKKFIDGYQEGIQQVMEKKDASDSQKGN 156

[Close]

BLAST of CsaV3_3G037560.1 vs. ExPASy TrEMBL
Match: A0A6J1F8D8 (uncharacterized protein LOC111441792 OS=Cucurbita moschata OX=3662 GN=LOC111441792 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.2e-72
Identity = 142/159 (89.31%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWV 60
           MKA+IVLRKIYDYVRYDLKEIAFPSSLPDPPH KKR KL+W ERFLVLKEASRLYAASWV
Sbjct: 1   MKARIVLRKIYDYVRYDLKEIAFPSSLPDPPHSKKRRKLTWRERFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120
           RDIGPELRP DYKV+ESENK NS K APKEKEPSTLEDLA+AARGGMETLKPALQRVYMT
Sbjct: 61  RDIGPELRPNDYKVEESENKKNSAKSAPKEKEPSTLEDLAMAARGGMETLKPALQRVYMT 120

Query: 121 RASAYRDALKNFIDGYQEGIQQVMEKKNASDSQKGSDKI 160
           +ASAYRDALKNFIDGYQEGIQQVMEKK  SDS+KGS+K+
Sbjct: 121 KASAYRDALKNFIDGYQEGIQQVMEKKKISDSEKGSEKM 159

[Close]

BLAST of CsaV3_3G037560.1 vs. TAIR 10
Match: AT5G06240.1 (embryo defective 2735 )

HSP 1 Score: 206.5 bits (524), Expect = 1.6e-53
Identity = 105/152 (69.08%), Postives = 123/152 (80.92%), Query Frame = 0


Query: 1   MKAKIVLRKIYDYVRYDLKEIAFPSSLPDPPHIKKRGKLSWNERFLVLKEASRLYAASWV 60
           MK K+V RK+ DY+ YDLKEI  PSSLPDPPH+ KR KL+W+ERFLVLKEASRLYAASWV
Sbjct: 1   MKLKVVYRKVSDYICYDLKEIVLPSSLPDPPHVVKRRKLTWHERFLVLKEASRLYAASWV 60

Query: 61  RDIGPELRPYDYKVKESENKPNSPKRAPKEKEPSTLEDLAVAARGGMETLKPALQRVYMT 120
           RDIGPELRP DYK K+ + +P    +   E EPS LEDLAVAARGGMETL+PAL R+YMT
Sbjct: 61  RDIGPELRPNDYK-KQGDAEPKKQAK-EAENEPSVLEDLAVAARGGMETLRPALHRLYMT 120

Query: 121 RASAYRDALKNFIDGYQEGIQQVMEKKNASDS 153
           RAS Y+DAL +FI GY EG+QQVM+ K  S++
Sbjct: 121 RASNYKDALTSFIKGYHEGLQQVMQNKAESEA 150

The following BLAST results are available for this feature:

BLAST of CsaV3_3G037560.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136494.1	1.6e-82	100.00	uncharacterized protein LOC101202894 [Cucumis sativus] >KGN59162.1 hypothetical ...	[more]
XP_008442875.1	5.5e-75	91.19	PREDICTED: uncharacterized protein LOC103486641 [Cucumis melo]	[more]
XP_023522298.1	3.9e-73	90.57	uncharacterized protein LOC111786187 [Cucurbita pepo subsp. pepo] >XP_023528947....	[more]
KAA0043851.1	6.7e-73	90.38	uncharacterized protein E6C27_scaffold236G001860 [Cucumis melo var. makuwa] >TYK...	[more]
XP_022144745.1	6.7e-73	88.68	uncharacterized protein LOC111014361 [Momordica charantia] >XP_022144746.1 uncha...	[more]

BLAST of CsaV3_3G037560.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G037560.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEN2	7.7e-83	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778190 PE=4 SV=1	[more]
A0A1S3B6Q8	2.6e-75	91.19	uncharacterized protein LOC103486641 OS=Cucumis melo OX=3656 GN=LOC103486641 PE=...	[more]
A0A6J1CSI2	3.2e-73	88.68	uncharacterized protein LOC111014361 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A5D3DNS5	3.2e-73	90.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1F8D8	1.2e-72	89.31	uncharacterized protein LOC111441792 OS=Cucurbita moschata OX=3662 GN=LOC1114417...	[more]

BLAST of CsaV3_3G037560.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06240.1	1.6e-53	69.08	embryo defective 2735	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..95
None	No IPR available	PANTHER	PTHR36064:SF1	EMBRYO DEFECTIVE 2735	coord: 1..154
None	No IPR available	PANTHER	PTHR36064	EMBRYO DEFECTIVE 2735	coord: 1..154

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_3G037560	CsaV3_3G037560	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G037560.1.exon1	CsaV3_3G037560.1.exon1	exon
CsaV3_3G037560.1.exon2	CsaV3_3G037560.1.exon2	exon
CsaV3_3G037560.1.exon3	CsaV3_3G037560.1.exon3	exon
CsaV3_3G037560.1.exon4	CsaV3_3G037560.1.exon4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G037560.1.cds1	CsaV3_3G037560.1.cds1	CDS
CsaV3_3G037560.1.cds2	CsaV3_3G037560.1.cds2	CDS
CsaV3_3G037560.1.cds3	CsaV3_3G037560.1.cds3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G037560.1	CsaV3_3G037560.1-protein	polypeptide