CsaV3_3G027630.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G027630.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Ribonucleoside-diphosphate reductase small chain
Location	chr3: 23907023 .. 23909082 (+)
Sequence length	990
RNA-Seq Expression	CsaV3_3G027630.1
Synteny	CsaV3_3G027630.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTAGAACGGAACCGGCAATTCCAAAGTTCCAAAATTGGGTGAAATTTAGATTTAAAGAAAAAAAAAAAAAGAAAAGAAAATTTAAATCACCCGCTATTTTTCAAAACCCTATCCCCAATTTCATTCTATAAAAACCCTACCTCTCCACTCCTTCCTCCACCATCGAAAAATCCCCCAATTTCACAGCCTCAACCTTTTTATTCATCCCCTCTTCCAATTCCCCGCCATGCCTTCCATTCCCGATGAGCCTCTCCTCGCCCCTAACCCTGATCGCTTCTGCATGTTCCCCATTCAATATCCCCAAATCTGGGAGATGTACAAGAAGGCCGAAGCCTCCTTCTGGACCGCCGAAGAGGTCGATCTCTCTCAAGACACTCGCCATTGGGATTCCTTAACTTCCGACGAGAAGCATTTCATCACTCACGTCCTTGCCTTCTTCGCTGCCTCTGATGGTATCGTCTTGGAGAACCTTGCCGGTCGGTTCATGAAGGAAGTTCAAGTCGCTGAAGTCAGAGCCTTCTACGGTTTCCAAATTGCTATCGAGAACATTCATTCCGAGATGTATAGTCTTCTCCTCGAAACTTACATCAAAGATTCGAATGAGAAGAATCGCTTGTTTCATGCTATTGATACTGTCCCCTGTGTCAAGAAGAAGGCCGATTGGGCGTTGAAGTGGATTGACAGCACGGAGTCATTTGCTGAGCGGATTTTGGCATTTGCTTGTGTTGAGGGAATTTTCTTCTCAGGTAGTTTCTGTTCTATTTTCTGGTTGAAAAAACGTGGGTTAATGCCTGGACTAACATTCTCAAACGAGTTGATTTCAAGAGATGAAGGTCTTCATTGTGATTTTGCATGTTTGTTGTATTCGTTGTTGAGGAAGAAATTGAATGTGGATCGAGTGAAGGAGATTGTTATGGAGGCTGTGAATATAGAGAGGGAATTCGTTTGTGATGCTTTGCCGGTGGCTCTAGTTGGAATGAATGGAGACCTTATGAGCCAATACATTGAATTTGTGGCAGATAGATTGGTTGGAGCATTGGGGTATGACAAAATCTACAATGTGCAAAATCCATTTGATTGGATGGAGTTGATTTCCTTGCAAGGGAAGACTAATTTCTTTGAGAAAAGAGTTGGGGAATATCAAAAGGCATCTGTGATGTCAAATCTAAATGGAAATGGAGGAATTCATGAGTTTAAGATGGATGAAGATTTCTGAAGATTGAAGATAAAGATGAGTTCACTGTGTAGAATAATATTTGTGGGTTCTTCTTTCTTTTAATTCTTATATGTAGTTTAGTATTTAGGGATTAGATTTGATTAAGTATGGTTAATTTAAGATTAAAAAAAAAAAATGTTTCATGGTTTGGGTTTAGGTTTATGTTGAATTTGGTGTGTTATGGCCACAAACTATGGCAGATTTAAGAAGCCTAAGATATGATGAGGGAAAAGAACCATTTTGTGATACTTGTTTTGCTGCTGTTATGCATCTTTGTTAAAGCATTATTATGTATTATAGTGTTTCATCATATAACACTGGCAACTCTACTTGCCAAATCTATTTTTATATCCTTTGATGACAAAATTTGAAGGTTTTTTTTTTTTTTTATTTGGATCCCAGATTCTAATGAAGTGTAGGGTATAATCATCTAAAAAAATTGCCGTTTGAAGCTTTCTTTTTTCCCTTCATTAATAATTTGTAACACTCATTTGGAGTTTGGTTTTATGCGAAAGATCTGGGAAATGGTCCAACATTTTTACTTGAAACTATTAAAATGTAAGTCTTTTTTATTTTTAGCATAAAAGGAAACTTTTTTAAAAATATTAAAAAATATCCCTTTTCACCTTTGTTTGTGCAAAAGACCCTCTCCAACTTCCTTTCCTCTTCACGTTAGTTCCTTCTTCATCTTCTTCGTCCCTTGTTTGTGATCGAATATTTAAATCAGGTGCATCGCCCCTCGTATCCATCCTCAACATTTGGTTTGCATTTGCTACAACGTTTACTAAGAACTCCTATTTCACTTTTAGGTGCCAAACCCTTACTAAGAACTCCTATTTCAC

mRNA sequence

ATGCCTTCCATTCCCGATGAGCCTCTCCTCGCCCCTAACCCTGATCGCTTCTGCATGTTCCCCATTCAATATCCCCAAATCTGGGAGATGTACAAGAAGGCCGAAGCCTCCTTCTGGACCGCCGAAGAGGTCGATCTCTCTCAAGACACTCGCCATTGGGATTCCTTAACTTCCGACGAGAAGCATTTCATCACTCACGTCCTTGCCTTCTTCGCTGCCTCTGATGGTATCGTCTTGGAGAACCTTGCCGGTCGGTTCATGAAGGAAGTTCAAGTCGCTGAAGTCAGAGCCTTCTACGGTTTCCAAATTGCTATCGAGAACATTCATTCCGAGATGTATAGTCTTCTCCTCGAAACTTACATCAAAGATTCGAATGAGAAGAATCGCTTGTTTCATGCTATTGATACTGTCCCCTGTGTCAAGAAGAAGGCCGATTGGGCGTTGAAGTGGATTGACAGCACGGAGTCATTTGCTGAGCGGATTTTGGCATTTGCTTGTGTTGAGGGAATTTTCTTCTCAGGTAGTTTCTGTTCTATTTTCTGGTTGAAAAAACGTGGGTTAATGCCTGGACTAACATTCTCAAACGAGTTGATTTCAAGAGATGAAGGTCTTCATTGTGATTTTGCATGTTTGTTGTATTCGTTGTTGAGGAAGAAATTGAATGTGGATCGAGTGAAGGAGATTGTTATGGAGGCTGTGAATATAGAGAGGGAATTCGTTTGTGATGCTTTGCCGGTGGCTCTAGTTGGAATGAATGGAGACCTTATGAGCCAATACATTGAATTTGTGGCAGATAGATTGGTTGGAGCATTGGGGTATGACAAAATCTACAATGTGCAAAATCCATTTGATTGGATGGAGTTGATTTCCTTGCAAGGGAAGACTAATTTCTTTGAGAAAAGAGTTGGGGAATATCAAAAGGCATCTGTGATGTCAAATCTAAATGGAAATGGAGGAATTCATGAGTTTAAGATGGATGAAGATTTCTGA

Coding sequence (CDS)

ATGCCTTCCATTCCCGATGAGCCTCTCCTCGCCCCTAACCCTGATCGCTTCTGCATGTTCCCCATTCAATATCCCCAAATCTGGGAGATGTACAAGAAGGCCGAAGCCTCCTTCTGGACCGCCGAAGAGGTCGATCTCTCTCAAGACACTCGCCATTGGGATTCCTTAACTTCCGACGAGAAGCATTTCATCACTCACGTCCTTGCCTTCTTCGCTGCCTCTGATGGTATCGTCTTGGAGAACCTTGCCGGTCGGTTCATGAAGGAAGTTCAAGTCGCTGAAGTCAGAGCCTTCTACGGTTTCCAAATTGCTATCGAGAACATTCATTCCGAGATGTATAGTCTTCTCCTCGAAACTTACATCAAAGATTCGAATGAGAAGAATCGCTTGTTTCATGCTATTGATACTGTCCCCTGTGTCAAGAAGAAGGCCGATTGGGCGTTGAAGTGGATTGACAGCACGGAGTCATTTGCTGAGCGGATTTTGGCATTTGCTTGTGTTGAGGGAATTTTCTTCTCAGGTAGTTTCTGTTCTATTTTCTGGTTGAAAAAACGTGGGTTAATGCCTGGACTAACATTCTCAAACGAGTTGATTTCAAGAGATGAAGGTCTTCATTGTGATTTTGCATGTTTGTTGTATTCGTTGTTGAGGAAGAAATTGAATGTGGATCGAGTGAAGGAGATTGTTATGGAGGCTGTGAATATAGAGAGGGAATTCGTTTGTGATGCTTTGCCGGTGGCTCTAGTTGGAATGAATGGAGACCTTATGAGCCAATACATTGAATTTGTGGCAGATAGATTGGTTGGAGCATTGGGGTATGACAAAATCTACAATGTGCAAAATCCATTTGATTGGATGGAGTTGATTTCCTTGCAAGGGAAGACTAATTTCTTTGAGAAAAGAGTTGGGGAATATCAAAAGGCATCTGTGATGTCAAATCTAAATGGAAATGGAGGAATTCATGAGTTTAAGATGGATGAAGATTTCTGA

Protein sequence

MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDEKHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETYIKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFVCDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSNLNGNGGIHEFKMDEDF*

Homology

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BLAST of CsaV3_3G027630.1 vs. NCBI nr
Match: XP_004145693.1 (ribonucleoside-diphosphate reductase small chain [Cucumis sativus] >KGN58233.1 hypothetical protein Csa_017522 [Cucumis sativus])

HSP 1 Score: 675.6 bits (1742), Expect = 2.1e-190
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0


Query: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60
           MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE
Sbjct: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120
           KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 330
           RVGEYQKASVMSNLNGNGGIHEFKMDEDF
Sbjct: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 329

[Close]

BLAST of CsaV3_3G027630.1 vs. NCBI nr
Match: XP_008450003.1 (PREDICTED: ribonucleoside-diphosphate reductase small chain [Cucumis melo])

HSP 1 Score: 646.0 bits (1665), Expect = 1.8e-181
Identity = 313/329 (95.14%), Postives = 322/329 (97.87%), Query Frame = 0


Query: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60
           MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKA ASFWTAEEVDLSQD RHWDSLTSDE
Sbjct: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSQDLRHWDSLTSDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120
           KHFIT+VLAFFAASDGIVLENLAGRFMKEVQVAE RAFYGFQI IENIHSEMYSLLLETY
Sbjct: 61  KHFITYVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQICIENIHSEMYSLLLETY 120

Query: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDS+EKNRLFHAIDTVPCVKKKADWALKWIDST+SFAERILAFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSSEKNRLFHAIDTVPCVKKKADWALKWIDSTDSFAERILAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKL+ DRV++IV EAV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVRQIVTEAVDIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALPVALVGMNGDLMSQYIEFVADRLVG LGY+KIYNVQNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGTLGYEKIYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 330
           RVGEYQKASVMS+LNGNGGIHEFKMDEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGGIHEFKMDEDF 329

[Close]

BLAST of CsaV3_3G027630.1 vs. NCBI nr
Match: KAG6581100.1 (hypothetical protein SDJN03_21102, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017830.1 hypothetical protein SDJN02_19696, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 640.2 bits (1650), Expect = 9.9e-180
Identity = 310/329 (94.22%), Postives = 320/329 (97.26%), Query Frame = 0


Query: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60
           MP+IPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD RHW+SLTSDE
Sbjct: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120
           KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAE RAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDSN+K+RLF AI+TVPCVKKKADWALKWIDSTE+FAERILAFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSNDKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKL+ DRVKEIV EAV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300
           C+ALPVALVGMNGDLMSQYIEFVADRLVGALGY KIYN QNPFDWMELISLQGKTNFFEK
Sbjct: 241 CEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 330
           RVG+YQKASVMSNLNGNG  HEFKMDEDF
Sbjct: 301 RVGDYQKASVMSNLNGNGDTHEFKMDEDF 329

[Close]

BLAST of CsaV3_3G027630.1 vs. NCBI nr
Match: XP_023527500.1 (ribonucleoside-diphosphate reductase small chain [Cucurbita pepo subsp. pepo])

HSP 1 Score: 639.8 bits (1649), Expect = 1.3e-179
Identity = 311/329 (94.53%), Postives = 319/329 (96.96%), Query Frame = 0


Query: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60
           MP+IPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD RHW+SLTSDE
Sbjct: 76  MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 135

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120
           KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAE RAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 136 KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 195

Query: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDSNEK+RLF AI+TVPCVKKKADWALKWIDSTE+FAERILAFACVEGIFFSGSFCSIF
Sbjct: 196 IKDSNEKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF 255

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL KKL+ DRVKEIV EAV+IEREFV
Sbjct: 256 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLWKKLSEDRVKEIVTEAVDIEREFV 315

Query: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALPVALVGMNGDLMSQYIEFVADRLVGALGY KIYN QNPFDWMELISLQGKTNFFEK
Sbjct: 316 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 375

Query: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 330
           RVG+YQKASVMSNLNGNG  HEFKMDEDF
Sbjct: 376 RVGDYQKASVMSNLNGNGDTHEFKMDEDF 404

[Close]

BLAST of CsaV3_3G027630.1 vs. NCBI nr
Match: XP_022935447.1 (ribonucleoside-diphosphate reductase small chain [Cucurbita moschata])

HSP 1 Score: 639.4 bits (1648), Expect = 1.7e-179
Identity = 310/329 (94.22%), Postives = 320/329 (97.26%), Query Frame = 0


Query: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60
           MP+IPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD RHW+SLTSDE
Sbjct: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120
           KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAE RAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDSNEK+RLF AI+TVPCVKKKADWALKWIDSTE+FAERILAFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSNEKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKL+ DRVKEIV EAV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300
           C+ALPVALVGMNGDLMSQYIEFVADRLVGALGY KIYN QNPFDWMELISLQGKTNFFEK
Sbjct: 241 CEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 330
           RVG+YQKASVMSNLNG+G  HEFKMDEDF
Sbjct: 301 RVGDYQKASVMSNLNGHGDTHEFKMDEDF 329

[Close]

BLAST of CsaV3_3G027630.1 vs. ExPASy Swiss-Prot
Match: P49730 (Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 4.0e-168
Identity = 283/329 (86.02%), Postives = 307/329 (93.31%), Query Frame = 0


Query: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60
           MP IP+EPLLA +PDRFCMFPIQYPQIWEMYKKA ASFWTAEEVDLS DTRHW++LT  E
Sbjct: 1   MPLIPEEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWETLTPGE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120
           +HFITHVLAFFAASDGIVLENLAGRFMKEVQVAE RAFYGFQIAIENIHSEMYSLLLE+Y
Sbjct: 61  RHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESY 120

Query: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDS+EK+RLF A++T PCV+KKA WAL+WID +E+FAER++AFACVEGIFFSGSFC+IF
Sbjct: 121 IKDSDEKSRLFRAVETNPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCAIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KL  +RVK IV +AV IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLTEERVKGIVADAVEIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALP ALVGMNGDLMS+YIEFVADRL+ ALGYDK+YN QNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSKYIEFVADRLLDALGYDKLYNAQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 330
           RVGEYQKASVMS+LNGNG  HEFK+DEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGATHEFKLDEDF 329

[Close]

BLAST of CsaV3_3G027630.1 vs. ExPASy Swiss-Prot
Match: Q9LSD0 (Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis thaliana OX=3702 GN=TSO2 PE=1 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 1.0e-158
Identity = 269/332 (81.02%), Postives = 297/332 (89.46%), Query Frame = 0


Query: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWD-SLTSD 60
           MPS+P+EPLL P PDRFCMFPI YPQIWEMYKKAEASFWTAEEVDLSQD R W+ SL   
Sbjct: 1   MPSMPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDG 60

Query: 61  EKHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLET 120
           E+HFI HVLAFFAASDGIVLENLA RFM +VQV+E RAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61  ERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDT 120

Query: 121 YIKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSI 180
           YIKD+ E++ LF AI+T+PCV KKA WA+KWID +++FAERI+AFACVEGIFFSGSFCSI
Sbjct: 121 YIKDNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSI 180

Query: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREF 240
           FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+LL+ KL+ +RVK IV +AV IEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREF 240

Query: 241 VCDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFE 300
           VCDALP ALVGMN DLMSQYIEFVADRL+GALGY K+Y V NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFE 300

Query: 301 KRVGEYQKASVMSNLNGNGGI--HEFKMDEDF 330
           KRVG+YQKASVMS++NGNG    H F +DEDF
Sbjct: 301 KRVGDYQKASVMSSVNGNGAFDNHVFSLDEDF 332

[Close]

BLAST of CsaV3_3G027630.1 vs. ExPASy Swiss-Prot
Match: P0DKH3 (Ribonucleoside-diphosphate reductase small chain B OS=Arabidopsis thaliana OX=3702 GN=RNR2B PE=2 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 1.9e-157
Identity = 266/333 (79.88%), Postives = 300/333 (90.09%), Query Frame = 0


Query: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWD-SLTSD 60
           MPS+P+EP+L P PDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD R W+ SLT+D
Sbjct: 1   MPSMPEEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTND 60

Query: 61  EKHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLET 120
           E+HFI HVLAFFAASDGIVLENL+ RFM +VQ++E RAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61  ERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDT 120

Query: 121 YIKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSI 180
           YIKD+ E++ LF AI+T+PCV KKA+WA+KWI+ ++SFAERI+AFACVEGIFFSGSFCSI
Sbjct: 121 YIKDNKERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSI 180

Query: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREF 240
           FWLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSLLR KL+ DR+K IV +AV IEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKLDEDRLKAIVCDAVEIEREF 240

Query: 241 VCDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFE 300
           VCDALP ALVGMN +LMSQYIEFVADRL+ ALG  K+Y V NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRELMSQYIEFVADRLLAALGCAKVYGVSNPFDWMELISLQGKTNFFE 300

Query: 301 KRVGEYQKASVMSNLNGNGGI---HEFKMDEDF 330
           KRVGEYQKAS+MS+++GN      H FK+DEDF
Sbjct: 301 KRVGEYQKASIMSSVHGNAAFNDDHVFKLDEDF 333

[Close]

BLAST of CsaV3_3G027630.1 vs. ExPASy Swiss-Prot
Match: P50651 (Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis thaliana OX=3702 GN=RNR2A PE=1 SV=2)

HSP 1 Score: 501.9 bits (1291), Expect = 5.5e-141
Identity = 240/324 (74.07%), Postives = 274/324 (84.57%), Query Frame = 0


Query: 6   DEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDEKHFIT 65
           +EPLL     RF MFPI+Y  IWEMYKKAEASFWTAEEVDLS D + W++LT  EKHFI+
Sbjct: 18  EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFIS 77

Query: 66  HVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETYIKDSN 125
           H+LAFFAASDGIVLENLA RF+ +VQV E RAFYGFQIA+ENIHSEMYSLLLET+IKDS 
Sbjct: 78  HILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSK 137

Query: 126 EKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIFWLKKR 185
           EK+RLF+AI+T+PC+ KKA W L WI S  SFA R++AFACVEGIFFSGSFC+IFWLKKR
Sbjct: 138 EKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKR 197

Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFVCDALP 245
           GLMPGLTFSNELISRDEGLHCDFACLLYSLL+K+L +++V +IV EAV IE EFVC ALP
Sbjct: 198 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPLEKVYQIVHEAVEIETEFVCKALP 257

Query: 246 VALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEKRVGEY 305
             L+GMN +LMSQYI+FVADRL+  LG ++ Y  +NPFDWME ISLQGKTNFFEKRVGEY
Sbjct: 258 CDLIGMNSNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRVGEY 317

Query: 306 QKASVMSNLNGNGGIHEFKMDEDF 330
           QKASVMSNL      +EF  +EDF
Sbjct: 318 QKASVMSNLQNGNQNYEFTTEEDF 341

[Close]

BLAST of CsaV3_3G027630.1 vs. ExPASy Swiss-Prot
Match: P79733 (Ribonucleoside-diphosphate reductase subunit M2 OS=Danio rerio OX=7955 GN=rrm2 PE=1 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 6.1e-132
Identity = 230/328 (70.12%), Postives = 269/328 (82.01%), Query Frame = 0


Query: 3   SIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDEKH 62
           ++ +EPLL  NP RF +FPIQY  IW+MYKKAEASFWTAEEVDLS+D +HWDSL  +E++
Sbjct: 63  AVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERY 122

Query: 63  FITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETYIK 122
           FI+HVLAFFAASDGIV ENL  RF +EVQV E R FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 123 FISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 182

Query: 123 DSNEKNRLFHAIDTVPCVKKKADWALKWI-DSTESFAERILAFACVEGIFFSGSFCSIFW 182
           DS E+  LF+AI+T+PCVKKKADWAL WI D    + ER++AFA VEGIFFSGSF SIFW
Sbjct: 183 DSKEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFW 242

Query: 183 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFVC 242
           LKKRGLMPGLTFSNELISRDEGLHCDFACL++  L  K + + VK+I+M AV IE+EF+ 
Sbjct: 243 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLINKPSEETVKKIIMNAVEIEQEFLT 302

Query: 243 DALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEKR 302
           DALPV L+GMN DLM QYIEFVADRL+  LG+DK+Y V+NPFD+ME ISL+GKTNFFEKR
Sbjct: 303 DALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYRVENPFDFMENISLEGKTNFFEKR 362

Query: 303 VGEYQKASVMSNLNGNGGIHEFKMDEDF 330
           VGEYQ+  VMS    N     F +D DF
Sbjct: 363 VGEYQRMGVMSGTTDN----TFTLDADF 386

[Close]

BLAST of CsaV3_3G027630.1 vs. ExPASy TrEMBL
Match: A0A0A0L8R8 (Ribonucleoside-diphosphate reductase small chain OS=Cucumis sativus OX=3659 GN=Csa_3G597320 PE=3 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 1.0e-190
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0


Query: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60
           MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE
Sbjct: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120
           KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 330
           RVGEYQKASVMSNLNGNGGIHEFKMDEDF
Sbjct: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 329

[Close]

BLAST of CsaV3_3G027630.1 vs. ExPASy TrEMBL
Match: A0A1S3BNB8 (ribonucleoside-diphosphate reductase small chain OS=Cucumis melo OX=3656 GN=LOC103491720 PE=3 SV=1)

HSP 1 Score: 646.0 bits (1665), Expect = 8.7e-182
Identity = 313/329 (95.14%), Postives = 322/329 (97.87%), Query Frame = 0


Query: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60
           MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKA ASFWTAEEVDLSQD RHWDSLTSDE
Sbjct: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSQDLRHWDSLTSDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120
           KHFIT+VLAFFAASDGIVLENLAGRFMKEVQVAE RAFYGFQI IENIHSEMYSLLLETY
Sbjct: 61  KHFITYVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQICIENIHSEMYSLLLETY 120

Query: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDS+EKNRLFHAIDTVPCVKKKADWALKWIDST+SFAERILAFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSSEKNRLFHAIDTVPCVKKKADWALKWIDSTDSFAERILAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKL+ DRV++IV EAV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVRQIVTEAVDIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALPVALVGMNGDLMSQYIEFVADRLVG LGY+KIYNVQNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGTLGYEKIYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 330
           RVGEYQKASVMS+LNGNGGIHEFKMDEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGGIHEFKMDEDF 329

[Close]

BLAST of CsaV3_3G027630.1 vs. ExPASy TrEMBL
Match: A0A6J1F5K5 (ribonucleoside-diphosphate reductase small chain OS=Cucurbita moschata OX=3662 GN=LOC111442318 PE=3 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 8.2e-180
Identity = 310/329 (94.22%), Postives = 320/329 (97.26%), Query Frame = 0


Query: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60
           MP+IPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD RHW+SLTSDE
Sbjct: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120
           KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAE RAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDSNEK+RLF AI+TVPCVKKKADWALKWIDSTE+FAERILAFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSNEKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKL+ DRVKEIV EAV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300
           C+ALPVALVGMNGDLMSQYIEFVADRLVGALGY KIYN QNPFDWMELISLQGKTNFFEK
Sbjct: 241 CEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 330
           RVG+YQKASVMSNLNG+G  HEFKMDEDF
Sbjct: 301 RVGDYQKASVMSNLNGHGDTHEFKMDEDF 329

[Close]

BLAST of CsaV3_3G027630.1 vs. ExPASy TrEMBL
Match: A0A6J1J9K8 (ribonucleoside-diphosphate reductase small chain OS=Cucurbita maxima OX=3661 GN=LOC111482520 PE=3 SV=1)

HSP 1 Score: 634.8 bits (1636), Expect = 2.0e-178
Identity = 309/329 (93.92%), Postives = 316/329 (96.05%), Query Frame = 0


Query: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60
           MP+IPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD RHW+SLT DE
Sbjct: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTFDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120
           KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAE RAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDSNEKN LF AI+TVPCVKKKADWALKWIDS E+FAERILAFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSNEKNLLFRAIETVPCVKKKADWALKWIDSPETFAERILAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKL+ DRVKEIV EAV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALPVALVGMNGDLMSQYIEFVADRLVGALGY KIYN  NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNALNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 330
           RVG+YQKASVMSNLNGNG  HEFKMDEDF
Sbjct: 301 RVGDYQKASVMSNLNGNGDTHEFKMDEDF 329

[Close]

BLAST of CsaV3_3G027630.1 vs. ExPASy TrEMBL
Match: B9RBH6 (Ribonucleoside-diphosphate reductase small chain, putative OS=Ricinus communis OX=3988 GN=RCOM_1677000 PE=3 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 2.8e-172
Identity = 293/329 (89.06%), Postives = 314/329 (95.44%), Query Frame = 0


Query: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60
           MP+IP+EPLLAPNPDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLSQD RHW+SLT DE
Sbjct: 1   MPAIPEEPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDLRHWESLTPDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120
           KHFI+HVLAFFAASDGIVLENLAGRFMKEVQVAE RAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFISHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDSNEKNRLFHAI+TVPC+ KKA+WALKWID +ESFAERI+AFACVEGIFFSGSFC+IF
Sbjct: 121 IKDSNEKNRLFHAIETVPCIAKKAEWALKWIDGSESFAERIIAFACVEGIFFSGSFCAIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSLL+KKL+ +RVK IV +AVNIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLKKKLSEERVKGIVRDAVNIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALP ALVGMNG+LMSQYIEFVADRL+GALG  K YNV NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGCGKEYNVSNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 330
           RVGEYQKA+VMS++NGNGG H FKMDEDF
Sbjct: 301 RVGEYQKAAVMSSINGNGGTHVFKMDEDF 329

[Close]

BLAST of CsaV3_3G027630.1 vs. TAIR 10
Match: AT3G27060.1 (Ferritin/ribonucleotide reductase-like family protein )

HSP 1 Score: 560.8 bits (1444), Expect = 7.1e-160
Identity = 269/332 (81.02%), Postives = 297/332 (89.46%), Query Frame = 0


Query: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWD-SLTSD 60
           MPS+P+EPLL P PDRFCMFPI YPQIWEMYKKAEASFWTAEEVDLSQD R W+ SL   
Sbjct: 1   MPSMPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDG 60

Query: 61  EKHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLET 120
           E+HFI HVLAFFAASDGIVLENLA RFM +VQV+E RAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61  ERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDT 120

Query: 121 YIKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSI 180
           YIKD+ E++ LF AI+T+PCV KKA WA+KWID +++FAERI+AFACVEGIFFSGSFCSI
Sbjct: 121 YIKDNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSI 180

Query: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREF 240
           FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+LL+ KL+ +RVK IV +AV IEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREF 240

Query: 241 VCDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFE 300
           VCDALP ALVGMN DLMSQYIEFVADRL+GALGY K+Y V NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFE 300

Query: 301 KRVGEYQKASVMSNLNGNGGI--HEFKMDEDF 330
           KRVG+YQKASVMS++NGNG    H F +DEDF
Sbjct: 301 KRVGDYQKASVMSSVNGNGAFDNHVFSLDEDF 332

[Close]

BLAST of CsaV3_3G027630.1 vs. TAIR 10
Match: AT3G23580.1 (ribonucleotide reductase 2A )

HSP 1 Score: 501.9 bits (1291), Expect = 3.9e-142
Identity = 240/324 (74.07%), Postives = 274/324 (84.57%), Query Frame = 0


Query: 6   DEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDEKHFIT 65
           +EPLL     RF MFPI+Y  IWEMYKKAEASFWTAEEVDLS D + W++LT  EKHFI+
Sbjct: 18  EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFIS 77

Query: 66  HVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETYIKDSN 125
           H+LAFFAASDGIVLENLA RF+ +VQV E RAFYGFQIA+ENIHSEMYSLLLET+IKDS 
Sbjct: 78  HILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSK 137

Query: 126 EKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIFWLKKR 185
           EK+RLF+AI+T+PC+ KKA W L WI S  SFA R++AFACVEGIFFSGSFC+IFWLKKR
Sbjct: 138 EKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKR 197

Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFVCDALP 245
           GLMPGLTFSNELISRDEGLHCDFACLLYSLL+K+L +++V +IV EAV IE EFVC ALP
Sbjct: 198 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPLEKVYQIVHEAVEIETEFVCKALP 257

Query: 246 VALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEKRVGEY 305
             L+GMN +LMSQYI+FVADRL+  LG ++ Y  +NPFDWME ISLQGKTNFFEKRVGEY
Sbjct: 258 CDLIGMNSNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRVGEY 317

Query: 306 QKASVMSNLNGNGGIHEFKMDEDF 330
           QKASVMSNL      +EF  +EDF
Sbjct: 318 QKASVMSNLQNGNQNYEFTTEEDF 341

The following BLAST results are available for this feature:

BLAST of CsaV3_3G027630.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145693.1	2.1e-190	100.00	ribonucleoside-diphosphate reductase small chain [Cucumis sativus] >KGN58233.1 h...	[more]
XP_008450003.1	1.8e-181	95.14	PREDICTED: ribonucleoside-diphosphate reductase small chain [Cucumis melo]	[more]
KAG6581100.1	9.9e-180	94.22	hypothetical protein SDJN03_21102, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023527500.1	1.3e-179	94.53	ribonucleoside-diphosphate reductase small chain [Cucurbita pepo subsp. pepo]	[more]
XP_022935447.1	1.7e-179	94.22	ribonucleoside-diphosphate reductase small chain [Cucurbita moschata]	[more]

BLAST of CsaV3_3G027630.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49730	4.0e-168	86.02	Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum OX=4097 PE...	[more]
Q9LSD0	1.0e-158	81.02	Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis thaliana OX=37...	[more]
P0DKH3	1.9e-157	79.88	Ribonucleoside-diphosphate reductase small chain B OS=Arabidopsis thaliana OX=37...	[more]
P50651	5.5e-141	74.07	Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis thaliana OX=37...	[more]
P79733	6.1e-132	70.12	Ribonucleoside-diphosphate reductase subunit M2 OS=Danio rerio OX=7955 GN=rrm2 P...	[more]

BLAST of CsaV3_3G027630.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8R8	1.0e-190	100.00	Ribonucleoside-diphosphate reductase small chain OS=Cucumis sativus OX=3659 GN=C...	[more]
A0A1S3BNB8	8.7e-182	95.14	ribonucleoside-diphosphate reductase small chain OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1F5K5	8.2e-180	94.22	ribonucleoside-diphosphate reductase small chain OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1J9K8	2.0e-178	93.92	ribonucleoside-diphosphate reductase small chain OS=Cucurbita maxima OX=3661 GN=...	[more]
B9RBH6	2.8e-172	89.06	Ribonucleoside-diphosphate reductase small chain, putative OS=Ricinus communis O...	[more]

BLAST of CsaV3_3G027630.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27060.1	7.1e-160	81.02	Ferritin/ribonucleotide reductase-like family protein	[more]
AT3G23580.1	3.9e-142	74.07	ribonucleotide reductase 2A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000358	Ribonucleotide reductase small subunit family	PFAM	PF00268	Ribonuc_red_sm	coord: 16..282 e-value: 7.1E-116 score: 386.6
IPR000358	Ribonucleotide reductase small subunit family	PANTHER	PTHR23409	RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN	coord: 6..329
IPR012348	Ribonucleotide reductase-like	GENE3D	1.10.620.20	Ribonucleotide Reductase, subunit A	coord: 3..307 e-value: 3.9E-131 score: 438.6
None	No IPR available	PIRSR	PIRSR000355-2	PIRSR000355-2	coord: 20..312 e-value: 3.6E-66 score: 221.5
None	No IPR available	PANTHER	PTHR23409:SF38	RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN	coord: 6..329
IPR030475	Ribonucleotide reductase small subunit, acitve site	PROSITE	PS00368	RIBORED_SMALL	coord: 105..121
IPR033909	Ribonucleotide reductase small subunit	CDD	cd01049	RNRR2	coord: 17..291 e-value: 4.94949E-137 score: 388.522
IPR009078	Ferritin-like superfamily	SUPERFAMILY	47240	Ferritin-like	coord: 4..307

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_3G027630	CsaV3_3G027630	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G027630.1.exon1	CsaV3_3G027630.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G027630.1.cds1	CsaV3_3G027630.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G027630.1	CsaV3_3G027630.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009263	deoxyribonucleotide biosynthetic process
molecular_function	GO:0016491	oxidoreductase activity