CsaV3_3G016880.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G016880.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	AAI domain-containing protein
Location	chr3: 12655797 .. 12656172 (+)
Sequence length	282
RNA-Seq Expression	CsaV3_3G016880.1
Synteny	CsaV3_3G016880.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGGCATCAAGTCTCTTGGGCAGCAGCAAGTTGTGATTCTGTCGTTGCTGGCTTTGATACTGGCTCAAGCACAGGCACAGCCTCAAGGCTGCTCAACTCAGCTCAGCAACTTAAATAGTTGTGCACCATTTGTGCTTCCTGGTGCTACTAACCCAAGCCCAGAGTGCTGTGGTGCACTTGGAGCTGTGCAACAAGATTGCCTTTGCAGCACCCTTAGAATTGCCTCCACTCTCCCTTCTCTTTGCCAACTTCCAACTCTCTCTTGTGGTCAGTCTTTTCTTTCTTTTTCTAACCATTTTTCTTAAGAATTGGCTGTTTCTGTTGAACGAAAGGTTTCTTTTTTCTTTTTGCTTCATTTCAGGTTCAAACTAG

mRNA sequence

ATGGCAGGCATCAAGTCTCTTGGGCAGCAGCAAGTTGTGATTCTGTCGTTGCTGGCTTTGATACTGGCTCAAGCACAGGCACAGCCTCAAGGCTGCTCAACTCAGCTCAGCAACTTAAATAGTTGTGCACCATTTGTGCTTCCTGGTGCTACTAACCCAAGCCCAGAGTGCTGTGGTGCACTTGGAGCTGTGCAACAAGATTGCCTTTGCAGCACCCTTAGAATTGCCTCCACTCTCCCTTCTCTTTGCCAACTTCCAACTCTCTCTTGTGGTTCAAACTAG

Coding sequence (CDS)

ATGGCAGGCATCAAGTCTCTTGGGCAGCAGCAAGTTGTGATTCTGTCGTTGCTGGCTTTGATACTGGCTCAAGCACAGGCACAGCCTCAAGGCTGCTCAACTCAGCTCAGCAACTTAAATAGTTGTGCACCATTTGTGCTTCCTGGTGCTACTAACCCAAGCCCAGAGTGCTGTGGTGCACTTGGAGCTGTGCAACAAGATTGCCTTTGCAGCACCCTTAGAATTGCCTCCACTCTCCCTTCTCTTTGCCAACTTCCAACTCTCTCTTGTGGTTCAAACTAG

Protein sequence

MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGALGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN*

Homology

[Close]

BLAST of CsaV3_3G016880.1 vs. NCBI nr
Match: XP_004140787.1 (protein MEN-8 [Cucumis sativus] >KGN57351.1 hypothetical protein Csa_010992 [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 7.2e-43
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA
Sbjct: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN
Sbjct: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 93

[Close]

BLAST of CsaV3_3G016880.1 vs. NCBI nr
Match: XP_008439180.1 (PREDICTED: protein MEN-8 [Cucumis melo] >KAA0033620.1 protein MEN-8 [Cucumis melo var. makuwa] >TYK22288.1 protein MEN-8 [Cucumis melo var. makuwa])

HSP 1 Score: 174.9 bits (442), Expect = 3.3e-40
Identity = 87/93 (93.55%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MAG+KSLG+QQVVILSLLAL+L QAQAQPQGCSTQLSNLNSCAPFVLPGA NPSPECCGA
Sbjct: 1  MAGVKSLGKQQVVILSLLALMLVQAQAQPQGCSTQLSNLNSCAPFVLPGAPNPSPECCGA 60

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          LGAVQQDCLCSTLRIASTLPSLC LPTLSCGSN
Sbjct: 61 LGAVQQDCLCSTLRIASTLPSLCHLPTLSCGSN 93

[Close]

BLAST of CsaV3_3G016880.1 vs. NCBI nr
Match: XP_038892584.1 (protein MEN-8-like [Benincasa hispida])

HSP 1 Score: 164.9 bits (416), Expect = 3.5e-37
Identity = 81/93 (87.10%), Postives = 87/93 (93.55%), Query Frame = 0


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MAGIKSLGQQQ VIL ++AL+L+QAQAQPQ CSTQLSNLN CAPFVLPGA+NPSPECCGA
Sbjct: 1  MAGIKSLGQQQFVILLVVALVLSQAQAQPQSCSTQLSNLNGCAPFVLPGASNPSPECCGA 60

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          LGAVQQDCLCSTLRIASTLPSLC LP L+CGSN
Sbjct: 61 LGAVQQDCLCSTLRIASTLPSLCHLPPLTCGSN 93

[Close]

BLAST of CsaV3_3G016880.1 vs. NCBI nr
Match: XP_022945428.1 (stamen-specific protein FIL1 [Cucurbita moschata])

HSP 1 Score: 149.4 bits (376), Expect = 1.5e-32
Identity = 73/93 (78.49%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MAGIKS G QQV++L L+ ++L Q+QAQ Q CSTQLSNLN CAPFVLPGA+NPSPECC A
Sbjct: 1  MAGIKSHGVQQVILLLLVTVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSPECCAA 60

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          LGAVQQDCLCSTLRI+STLPSLC+LP LSCG+N
Sbjct: 61 LGAVQQDCLCSTLRISSTLPSLCRLPPLSCGTN 93

[Close]

BLAST of CsaV3_3G016880.1 vs. NCBI nr
Match: XP_022968421.1 (stamen-specific protein FIL1 [Cucurbita maxima] >XP_023542033.1 stamen-specific protein FIL1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147.9 bits (372), Expect = 4.4e-32
Identity = 72/93 (77.42%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MAG KS G QQV++L L++++L Q+QAQ Q CSTQLSNLN CAPFVLPGA+NPSPECC A
Sbjct: 1  MAGTKSHGVQQVILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSPECCAA 60

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          LGAVQQDCLCSTLRI+STLPSLC+LP LSCG+N
Sbjct: 61 LGAVQQDCLCSTLRISSTLPSLCRLPPLSCGTN 93

[Close]

BLAST of CsaV3_3G016880.1 vs. ExPASy Swiss-Prot
Match: O24356 (Protein MEN-8 OS=Silene latifolia OX=37657 GN=MEN-8 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.4e-18
Identity = 45/84 (53.57%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 12  VVILSLLALI-LAQAQAQPQGCSTQLSNLNSCAPFVLPGA--TNPSPECCGALGAVQQDC 71
           + +++L  L+ L  ++AQ  GC++QL NLN CAP+V+PGA  TNPS ECC AL  V  DC
Sbjct: 17  IFLVALAILVQLKGSEAQAGGCASQLGNLNVCAPYVVPGAVNTNPSQECCAALSGVNHDC 76

Query: 72  LCSTLRIASTLPSLCQLPTLSCGS 93
           +C+TLR+AS LPS C L  L+CG+
Sbjct: 77  MCNTLRVASQLPSSCNLAALNCGN 100

[Close]

BLAST of CsaV3_3G016880.1 vs. ExPASy Swiss-Prot
Match: Q38737 (Stamen-specific protein FIL1 OS=Antirrhinum majus OX=4151 GN=FIL1 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 9.2e-17
Identity = 49/96 (51.04%), Postives = 67/96 (69.79%), Query Frame = 0


Query: 1  MAGIKSLGQQQVVILSLLALILAQA----QAQPQGCSTQLSNLNSCAPFVLPG-ATNPSP 60
          MA +KS     +V L +L +++AQ+    Q++ Q CS  L+NLN+CAPFV+ G AT PS 
Sbjct: 1  MAAMKS-----IVPLVMLTVLVAQSQLITQSEAQTCSASLANLNACAPFVVLGAATTPSS 60

Query: 61 ECCGALGAVQQDCLCSTLRIASTLPSLCQLPTLSCG 92
          +CC AL +V  +CLC+TLRIAS +P+ C LP LSCG
Sbjct: 61 DCCTALQSVDHECLCNTLRIASRVPAQCNLPPLSCG 91

[Close]

BLAST of CsaV3_3G016880.1 vs. ExPASy Swiss-Prot
Match: Q43495 (Protein 108 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 8.6e-15
Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = 0


Query: 1   MAGIKSLGQQQ-----VVILSLLALILAQAQ---AQP-QGCSTQLSNLNSCAPFVLPGAT 60
           MA +KS           ++L +L +I+ Q+Q    QP Q C+  L+ LN CAPF++PG+ 
Sbjct: 1   MASVKSSSSSSSSSFISLLLLILLVIVLQSQVIECQPQQSCTASLTGLNVCAPFLVPGSP 60

Query: 61  NPSPECCGALGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
             S ECC A+ ++  DC+C+T+RIA+ +P+ C LP LSC +N
Sbjct: 61  TASTECCNAVQSINHDCMCNTMRIAAQIPAQCNLPPLSCSAN 102

[Close]

BLAST of CsaV3_3G016880.1 vs. ExPASy Swiss-Prot
Match: Q00762 (Tapetum-specific protein A9 OS=Arabidopsis thaliana OX=3702 GN=A9 PE=2 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 8.1e-13
Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = 0


Query: 12 VVILSLLALILAQAQAQ-----PQGCSTQLSNLNSCAPFVLPGATNP--SPECCGALGAV 71
          V + SL A+++A   A       Q C  +LSN+  CAP +LPGA NP  +  CC AL A 
Sbjct: 2  VSLKSLAAILVAMFLATGPTVLAQQCRDELSNVQVCAPLLLPGAVNPAANSNCCAALQAT 61

Query: 72 QQDCLCSTLRIASTLPSLCQLPTLSCG 92
           +DCLC+ LR A+TL SLC LP+  CG
Sbjct: 62 NKDCLCNALRAATTLTSLCNLPSFDCG 88

[Close]

BLAST of CsaV3_3G016880.1 vs. ExPASy Swiss-Prot
Match: Q05772 (Tapetum-specific protein A9 OS=Brassica napus OX=3708 GN=A9 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 6.8e-12
Identity = 38/93 (40.86%), Postives = 52/93 (55.91%), Query Frame = 0


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSP--ECC 60
          M  +KS      V+   ++ +      + Q C   LSN+  CAP VLPGA NP+P   CC
Sbjct: 1  MEFLKSFTTILFVMFLAMSALETVPMVRAQQCLDNLSNMQVCAPLVLPGAVNPAPNSNCC 60

Query: 61 GALGAVQQDCLCSTLRIASTLPSLCQLPTLSCG 92
           AL A  +DC+C+ LR A+T  + C LP+L CG
Sbjct: 61 IALQATNKDCICNALRAATTFTTTCNLPSLDCG 93

[Close]

BLAST of CsaV3_3G016880.1 vs. ExPASy TrEMBL
Match: A0A0A0LBB5 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180390 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.5e-43
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA
Sbjct: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN
Sbjct: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 93

[Close]

BLAST of CsaV3_3G016880.1 vs. ExPASy TrEMBL
Match: A0A5D3DFQ3 (Protein MEN-8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00440 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.6e-40
Identity = 87/93 (93.55%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MAG+KSLG+QQVVILSLLAL+L QAQAQPQGCSTQLSNLNSCAPFVLPGA NPSPECCGA
Sbjct: 1  MAGVKSLGKQQVVILSLLALMLVQAQAQPQGCSTQLSNLNSCAPFVLPGAPNPSPECCGA 60

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          LGAVQQDCLCSTLRIASTLPSLC LPTLSCGSN
Sbjct: 61 LGAVQQDCLCSTLRIASTLPSLCHLPTLSCGSN 93

[Close]

BLAST of CsaV3_3G016880.1 vs. ExPASy TrEMBL
Match: A0A1S3AY46 (protein MEN-8 OS=Cucumis melo OX=3656 GN=LOC103484052 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.6e-40
Identity = 87/93 (93.55%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MAG+KSLG+QQVVILSLLAL+L QAQAQPQGCSTQLSNLNSCAPFVLPGA NPSPECCGA
Sbjct: 1  MAGVKSLGKQQVVILSLLALMLVQAQAQPQGCSTQLSNLNSCAPFVLPGAPNPSPECCGA 60

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          LGAVQQDCLCSTLRIASTLPSLC LPTLSCGSN
Sbjct: 61 LGAVQQDCLCSTLRIASTLPSLCHLPTLSCGSN 93

[Close]

BLAST of CsaV3_3G016880.1 vs. ExPASy TrEMBL
Match: A0A6J1G0V2 (stamen-specific protein FIL1 OS=Cucurbita moschata OX=3662 GN=LOC111449664 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 7.3e-33
Identity = 73/93 (78.49%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MAGIKS G QQV++L L+ ++L Q+QAQ Q CSTQLSNLN CAPFVLPGA+NPSPECC A
Sbjct: 1  MAGIKSHGVQQVILLLLVTVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSPECCAA 60

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          LGAVQQDCLCSTLRI+STLPSLC+LP LSCG+N
Sbjct: 61 LGAVQQDCLCSTLRISSTLPSLCRLPPLSCGTN 93

[Close]

BLAST of CsaV3_3G016880.1 vs. ExPASy TrEMBL
Match: A0A6J1HUT5 (stamen-specific protein FIL1 OS=Cucurbita maxima OX=3661 GN=LOC111467668 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.1e-32
Identity = 72/93 (77.42%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MAG KS G QQV++L L++++L Q+QAQ Q CSTQLSNLN CAPFVLPGA+NPSPECC A
Sbjct: 1  MAGTKSHGVQQVILLLLVSVLLWQSQAQAQSCSTQLSNLNGCAPFVLPGASNPSPECCAA 60

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          LGAVQQDCLCSTLRI+STLPSLC+LP LSCG+N
Sbjct: 61 LGAVQQDCLCSTLRISSTLPSLCRLPPLSCGTN 93

[Close]

BLAST of CsaV3_3G016880.1 vs. TAIR 10
Match: AT5G52160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 89.0 bits (219), Expect = 2.3e-18
Identity = 46/87 (52.87%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 6  SLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGA--TNPSPECCGALGA 65
          S+   +V ++  L L++A      Q C+ QLS LN C  FV+PGA  TNPS ECC AL A
Sbjct: 9  SMSFMKVAMMVALVLVVAATVVDGQSCNAQLSTLNVCGEFVVPGADRTNPSAECCNALEA 68

Query: 66 VQQDCLCSTLRIASTLPSLCQLPTLSC 91
          V  +CLC+T RIAS LPS C +PTLSC
Sbjct: 69 VPNECLCNTFRIASRLPSRCNIPTLSC 95

[Close]

BLAST of CsaV3_3G016880.1 vs. TAIR 10
Match: AT5G62080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.0e-15
Identity = 41/93 (44.09%), Postives = 55/93 (59.14%), Query Frame = 0


Query: 1  MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGA 60
          MA  KS     V+ +  LA+   +   Q Q C   L+N+  CA  VLPG+  P+ ECC A
Sbjct: 4  MASFKSFA--AVLSVLFLAMTAIETVVQAQECGNDLANVQVCAAMVLPGSGRPNSECCAA 63

Query: 61 LGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN 94
          L +  +DCLC+ LR A++LPSLC LP + CG N
Sbjct: 64 LQSTNRDCLCNALRAATSLPSLCNLPPVDCGIN 94

[Close]

BLAST of CsaV3_3G016880.1 vs. TAIR 10
Match: AT5G07230.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 74.3 bits (181), Expect = 5.7e-14
Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = 0


Query: 12 VVILSLLALILAQAQAQ-----PQGCSTQLSNLNSCAPFVLPGATNP--SPECCGALGAV 71
          V + SL A+++A   A       Q C  +LSN+  CAP +LPGA NP  +  CC AL A 
Sbjct: 2  VSLKSLAAILVAMFLATGPTVLAQQCRDELSNVQVCAPLLLPGAVNPAANSNCCAALQAT 61

Query: 72 QQDCLCSTLRIASTLPSLCQLPTLSCG 92
           +DCLC+ LR A+TL SLC LP+  CG
Sbjct: 62 NKDCLCNALRAATTLTSLCNLPSFDCG 88

The following BLAST results are available for this feature:

BLAST of CsaV3_3G016880.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140787.1	7.2e-43	100.00	protein MEN-8 [Cucumis sativus] >KGN57351.1 hypothetical protein Csa_010992 [Cuc...	[more]
XP_008439180.1	3.3e-40	93.55	PREDICTED: protein MEN-8 [Cucumis melo] >KAA0033620.1 protein MEN-8 [Cucumis mel...	[more]
XP_038892584.1	3.5e-37	87.10	protein MEN-8-like [Benincasa hispida]	[more]
XP_022945428.1	1.5e-32	78.49	stamen-specific protein FIL1 [Cucurbita moschata]	[more]
XP_022968421.1	4.4e-32	77.42	stamen-specific protein FIL1 [Cucurbita maxima] >XP_023542033.1 stamen-specific ...	[more]

BLAST of CsaV3_3G016880.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24356	6.4e-18	53.57	Protein MEN-8 OS=Silene latifolia OX=37657 GN=MEN-8 PE=3 SV=1	[more]
Q38737	9.2e-17	51.04	Stamen-specific protein FIL1 OS=Antirrhinum majus OX=4151 GN=FIL1 PE=2 SV=1	[more]
Q43495	8.6e-15	41.18	Protein 108 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
Q00762	8.1e-13	47.13	Tapetum-specific protein A9 OS=Arabidopsis thaliana OX=3702 GN=A9 PE=2 SV=2	[more]
Q05772	6.8e-12	40.86	Tapetum-specific protein A9 OS=Brassica napus OX=3708 GN=A9 PE=2 SV=1	[more]

BLAST of CsaV3_3G016880.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBB5	3.5e-43	100.00	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180390 PE=4 SV...	[more]
A0A5D3DFQ3	1.6e-40	93.55	Protein MEN-8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00440 ...	[more]
A0A1S3AY46	1.6e-40	93.55	protein MEN-8 OS=Cucumis melo OX=3656 GN=LOC103484052 PE=4 SV=1	[more]
A0A6J1G0V2	7.3e-33	78.49	stamen-specific protein FIL1 OS=Cucurbita moschata OX=3662 GN=LOC111449664 PE=4 ...	[more]
A0A6J1HUT5	2.1e-32	77.42	stamen-specific protein FIL1 OS=Cucurbita maxima OX=3661 GN=LOC111467668 PE=4 SV...	[more]

BLAST of CsaV3_3G016880.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52160.1	2.3e-18	52.87	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G62080.1	1.0e-15	44.09	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G07230.1	5.7e-14	47.13	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 32..90 e-value: 8.3E-6 score: 35.3
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 20..73 e-value: 1.1E-4 score: 22.2
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 30..90 e-value: 4.6E-8 score: 34.8
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 18..91
None	No IPR available	PANTHER	PTHR35501:SF3	PROTEIN YY1	coord: 9..91
None	No IPR available	PANTHER	PTHR35501	PROTEIN YY1	coord: 9..91

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_3G016880	CsaV3_3G016880	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G016880.1.exon1	CsaV3_3G016880.1.exon1	exon
CsaV3_3G016880.1.exon2	CsaV3_3G016880.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G016880.1.cds1	CsaV3_3G016880.1.cds1	CDS
CsaV3_3G016880.1.cds2	CsaV3_3G016880.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G016880.1	CsaV3_3G016880.1-protein	polypeptide