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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGGAAACGAGGAAGAAAGAGGAAGTGGAAGTGCAAGTTCCTCCTTTTCTGGCTCACATGGCGACTTTCCATTTTCGACATTCTGTCTTCTTCTGACTTCGTATTACCCTTCTCTGTGTTCTTCTTATCTAATAAACTTCCACTTCTCGAAGGTAAAAAACCAATACCCATAAAACGCTTTTACATCAATTTCTTTATTCTATGATGATGATGATGATGATGATGATACGATATTCGATTTCATTTTGATTTGATTTGATTTTTGAATGCGCCTCTCTCTTTGACAAAAACCCTTCCAAAATCCCCTTCAATTACAACTCTTTTTCTCTCTTCTTTTAGATCTCGCTGTTCCTATTTCTTGTTTGTCTGCCTACCAAACGCTTGTTTGTGAAACCCCTTTTCTTCTCTATTGTATCCTCTTTTTGATACAAACGTTATTTGTTGGGTTTTGCCCTTTGCTTGGATGGTGGGGTTTTCCTGCTTTTTTTTTTTTTTTTCCTTTCTTGTATTCTTTTCTTGATTCCTTTAACATATTTTTATCCGTTTCTTTACGGATTCTACTGCTCTTGATTGTATTTCTTTAATTTATAATTCGTGCTTCACGCACCCACATGCATGTTTTTGGGTTTGTCTGATCTGGATTGGATCACAAGGATCTTATGTTCTTTTTCTACTTGCAGAGAGAGGGATAGAGAGAGAAAGAGGGTGGGGTTTAGGCTCTTTTCCTGCAATCTTGGTCTCTAGAGAGAGGGTGTCATGGAAGAAGCAAACAGGAGGAGGAGGAGGTAAGTTTTCTTGA mRNA sequence ATGGGGAAACGAGGAAGAAAGAGGAAGTGGAAGTGCAAGTTCCTCCTTTTCTGGCTCACATGGCGACTTTCCATTTTCGACATTCTGTCTTCTTCTGACTTCGTATTACCCTTCTCTGTGTTCTTCTTATCTAATAAACTTCCACTTCTCGAAGAGAGAGGGATAGAGAGAGAAAGAGGGTGGGGTTTAGGCTCTTTTCCTGCAATCTTGGTCTCTAGAGAGAGGGTGTCATGGAAGAAGCAAACAGGAGGAGGAGGAGGTAAGTTTTCTTGA Coding sequence (CDS) ATGGGGAAACGAGGAAGAAAGAGGAAGTGGAAGTGCAAGTTCCTCCTTTTCTGGCTCACATGGCGACTTTCCATTTTCGACATTCTGTCTTCTTCTGACTTCGTATTACCCTTCTCTGTGTTCTTCTTATCTAATAAACTTCCACTTCTCGAAGAGAGAGGGATAGAGAGAGAAAGAGGGTGGGGTTTAGGCTCTTTTCCTGCAATCTTGGTCTCTAGAGAGAGGGTGTCATGGAAGAAGCAAACAGGAGGAGGAGGAGGTAAGTTTTCTTGA Protein sequence MGKRGRKRKWKCKFLLFWLTWRLSIFDILSSSDFVLPFSVFFLSNKLPLLEERGIERERGWGLGSFPAILVSRERVSWKKQTGGGGGKFS*
Homology
BLAST of CsaV3_3G011190.1 vs. NCBI nr
Match: KGN56758.1 (hypothetical protein Csa_009575 [Cucumis sativus]) HSP 1 Score: 189.9 bits (481), Expect = 9.7e-45 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
Query: 1 MGKRGRKRKWKCKFLLFWLTWRLSIFDILSSSDFVLPFSVFFLSNKLPLLEERGIERERG 60
MGKRGRKRKWKCKFLLFWLTWRLSIFDILSSSDFVLPFSVFFLSNKLPLLEERGIERERG
Sbjct: 1 MGKRGRKRKWKCKFLLFWLTWRLSIFDILSSSDFVLPFSVFFLSNKLPLLEERGIERERG 60
Query: 61 WGLGSFPAILVSRERVSWKKQTGGGGGKFS 91
WGLGSFPAILVSRERVSWKKQTGGGGGKFS
Sbjct: 61 WGLGSFPAILVSRERVSWKKQTGGGGGKFS 90
BLAST of CsaV3_3G011190.1 vs. ExPASy TrEMBL
Match: A0A0A0L4R3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G132600 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 4.7e-45 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
Query: 1 MGKRGRKRKWKCKFLLFWLTWRLSIFDILSSSDFVLPFSVFFLSNKLPLLEERGIERERG 60
MGKRGRKRKWKCKFLLFWLTWRLSIFDILSSSDFVLPFSVFFLSNKLPLLEERGIERERG
Sbjct: 1 MGKRGRKRKWKCKFLLFWLTWRLSIFDILSSSDFVLPFSVFFLSNKLPLLEERGIERERG 60
Query: 61 WGLGSFPAILVSRERVSWKKQTGGGGGKFS 91
WGLGSFPAILVSRERVSWKKQTGGGGGKFS
Sbjct: 61 WGLGSFPAILVSRERVSWKKQTGGGGGKFS 90
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN56758.1 | 9.7e-45 | 100.00 | hypothetical protein Csa_009575 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L4R3 | 4.7e-45 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G132600 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_3G011190.1.exon2 | CsaV3_3G011190.1.exon2 | exon |
| CsaV3_3G011190.1.exon1 | CsaV3_3G011190.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_3G011190.1.cds2 | CsaV3_3G011190.1.cds2 | CDS |
| CsaV3_3G011190.1.cds1 | CsaV3_3G011190.1.cds1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsaV3_3G011190.1 | CsaV3_3G011190.1-protein | polypeptide |
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