CsaV3_2G004190.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G004190.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Calmodulin-like
Location	chr2: 2186331 .. 2189129 (+)
Sequence length	441
RNA-Seq Expression	CsaV3_2G004190.1
Synteny	CsaV3_2G004190.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTATATAGTTGTAGCCTTTAGTTTTATTCCAATTTGTTCCAAACCCAAAGCTTAGTTAATTAAGCATATAATTTTTTCCATCAAAGTCCCCTAATAAGCTTTCTGTTCTTCTTCATTACATAATGTCTGAAGAGCAAATAATTTCAGAATTTCAAGAAGCCTTTTGTCTACTTGACAAAGATGGTGATGGTATGTATGATTTTCCTTTTCTTTTCTTGTAAAATATTTATTATCAGTACAAGTATAAAAACTATCAAATTCTCATGTTTGTTTGATCGTCCTTTTATGCTTGAGTTCTTGAAGTACCGATAATTTTATGTTCTATTTGATAACTATTATTTTTCAACCAAAACTTTAAATTTGATCGATCCAAAAATAAATAAAACATCACTTAACTTTAAAACAACGTGAAAATAAAAGAGATTTTTAGGGTTAATAACCTAAGATAATTAAAAATTACTTATTCGGAAAACATTTTTTCTTTATTAGATCCAAACAAACTCGAAATACTTGTCATTAACTATTGAAGATACATTTGATCGAGTTGGCCATGATCACACACACGGTCAACTTGATTTTTAAGAAAAAATGTTTATAGTATTTGTAAGGTGAGGATTATAGTTTTAATGTATAGAAATCACACACATATGTAATGTGATTATATATAACTCTAATATAAAGTGTTTTTGGAATAATAATATAGGATGTATAACAATCAATGAATTAGCCACAGCTATTAGATCATTACATCACAACCCTACTGAAGAAGAATTGCAGATAATGATGAATGAAGTTGATGTTAATGGCAATGGATATATTGAATTTGGGGAGTTCTTCAATCTCATGGCAAAAAAGATGAAGGTAAGTATGATTAATTCATACCTTTGTTTATATAGGAAAATGTGTGAAAGGTTAAATTTAGTATAAACTATTAACAACTACTACCTACATCATTGATTTTCACACAACTACTACCTACATCATTGGTGATTTACATAAATGATTTTACGTGTGAATTTGCTACGAAATTGATAAATAAAGAATGCATAAAAACGTAAAAGAGTAGAGATTCGATACATAAGTAGAAAAAGTGTTAAACAAGTATGTTTATATTTTCAACAAATATGGTTAAACAAAAATGGTTGGGTCTTTTTTTTTTCTTTTAATTCAAGTCAATTTACTTGTTAAACAAGCATCTTTATGATTAAGAAATTGAATAGATAATTAGTTTATTCAGTATATATATGTTGATAATTTACTACGATAGTCATTTGATATGTAATATTAAATATTATATTTCAATACTTAAAATTAAAAAAAAAAACATATAATATAATCAATAATTTTTAGATCCTATTGAGTAATTTCGACCATTTGCATTATATTTTATTTTTTAAAAAATGTTCCCTTTGACTCAAGTTTAATGTTTTTCATGTGTATATTGAGATTTTTTTAGATTTAAAATAAAATTATTTAAAAAATATAGCAAAAACCTATTCAACTCTCTTTAGTCCATTTATACCTTTTGTTATATTTTTTAAATAGTTTTATTTGTTTTGCTATCCATAAAAAATTTCATTTAATTTTATTAGGGTCTAAATTAGCAATAAATTAGTTTAAGTTTTTTAAATATTTTTTATTATAAAATTAAAACAATCATTTAAAAAAGTTACCTATCCAAAACTCACTTTAAAATTATTGATTTAAACTTTCTAAAGGTTTATAGGAAATTTGATTTTTTGTTTGAAAACTTATTTTTTAGATCTTAAAATAACTTTTTTTGTATAGTTGCAACCTATAGGTAAAAAGATTCCAAGTTTGACCTCTACAAAAATAATATTTAGCTTAAACTAGACTCACTAAATAATCTAAATCTTACTCACATATATGATTTAATTTGATGCAAATACAAAGGGTAGGTTAAAAACGTACAAATATATATATATATATATATATATATGTATGTATGTATGTATGTATGTATATGTATATATCTTAAAAGAACAAGAATTAAAAATGAAATTGTAAGATAAGGAGAACAAAATAATATTTTAACCTAAATTGTAATTGATAATATATCTATCTATGTTTATGTTTATATATATATTCGTCCTTTTACATATGAATGCATTTGAATATATTTAGGAAAATGAAGCAGAAGATGAACTAAGAGAAGCTTTCAAAGTATTTGACATGGATGATGATGGAAAAATATCACCAAATGAGGTTTGGCTTCTAATAACCCTAATTAGATTTTGTTAAACTAGTTAATTATAATTATAACATGTCCAAGAGTAAAATTTTAAAATAATTAAATTGTCATTTTTAAAATCACTTGATAAAACGATTCTTGTTCATTAGTTTTCATAGGGTAAAAAATGTCACTCTAAAAATGCATAAACTTCTTTTAGAAGTCAATTAAGTCTACTCAATAATAATTTGTTTGATCATTTGCTACCCACTCACCTCTAATGAGAGAGATCAATTAGGATTATATGATAATATAATCACTTTTAATAATACGTTCAAAGTTGTATTATTGAGCAGCTGAAGAATGTAATGATCCACATGGTAGAGAAATTAACAGATGAAGAAATAGAGCAAATGGTCAATGAAGCTGATTTAGATGGAGATGGACTTATTGACTATGAAGAATTTGTTAAAATGATGCTTCTTATCTGATCCTAAATTAAATCCCCTTTTCTCCAAAAGAAAAAACAATTAATTTCATGAGGATTCTTTATAATATCATTATTAATGTTTTGTATTTTAAAGGTATTTTTAAACCATTAATTAAT

mRNA sequence

ATGTCTGAAGAGCAAATAATTTCAGAATTTCAAGAAGCCTTTTGTCTACTTGACAAAGATGGTGATGGATGTATAACAATCAATGAATTAGCCACAGCTATTAGATCATTACATCACAACCCTACTGAAGAAGAATTGCAGATAATGATGAATGAAGTTGATGTTAATGGCAATGGATATATTGAATTTGGGGAGTTCTTCAATCTCATGGCAAAAAAGATGAAGGAAAATGAAGCAGAAGATGAACTAAGAGAAGCTTTCAAAGTATTTGACATGGATGATGATGGAAAAATATCACCAAATGAGCTGAAGAATGTAATGATCCACATGGTAGAGAAATTAACAGATGAAGAAATAGAGCAAATGGTCAATGAAGCTGATTTAGATGGAGATGGACTTATTGACTATGAAGAATTTGTTAAAATGATGCTTCTTATCTGA

Coding sequence (CDS)

ATGTCTGAAGAGCAAATAATTTCAGAATTTCAAGAAGCCTTTTGTCTACTTGACAAAGATGGTGATGGATGTATAACAATCAATGAATTAGCCACAGCTATTAGATCATTACATCACAACCCTACTGAAGAAGAATTGCAGATAATGATGAATGAAGTTGATGTTAATGGCAATGGATATATTGAATTTGGGGAGTTCTTCAATCTCATGGCAAAAAAGATGAAGGAAAATGAAGCAGAAGATGAACTAAGAGAAGCTTTCAAAGTATTTGACATGGATGATGATGGAAAAATATCACCAAATGAGCTGAAGAATGTAATGATCCACATGGTAGAGAAATTAACAGATGAAGAAATAGAGCAAATGGTCAATGAAGCTGATTTAGATGGAGATGGACTTATTGACTATGAAGAATTTGTTAAAATGATGCTTCTTATCTGA

Protein sequence

MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGYIEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIEQMVNEADLDGDGLIDYEEFVKMMLLI*

Homology

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BLAST of CsaV3_2G004190.1 vs. NCBI nr
Match: XP_011648759.1 (calmodulin-like protein 8 [Cucumis sativus] >KGN60815.1 hypothetical protein Csa_019385 [Cucumis sativus])

HSP 1 Score: 290.4 bits (742), Expect = 8.5e-75
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60
           MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY
Sbjct: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60

Query: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120
           IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE
Sbjct: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120

Query: 121 QMVNEADLDGDGLIDYEEFVKMMLLI 147
           QMVNEADLDGDGLIDYEEFVKMMLLI
Sbjct: 121 QMVNEADLDGDGLIDYEEFVKMMLLI 146

[Close]

BLAST of CsaV3_2G004190.1 vs. NCBI nr
Match: XP_008455900.1 (PREDICTED: calmodulin-like protein 8 [Cucumis melo])

HSP 1 Score: 283.5 bits (724), Expect = 1.0e-72
Identity = 143/146 (97.95%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60
           MSEEQIISEFQEAFCLLDKDGDGCITI ELATAIRSLHHNPTEEELQIMMNEVDVNGNGY
Sbjct: 1   MSEEQIISEFQEAFCLLDKDGDGCITIEELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60

Query: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120
           IEFGEFFNLMAKKMKENEAE+ELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE
Sbjct: 61  IEFGEFFNLMAKKMKENEAEEELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120

Query: 121 QMVNEADLDGDGLIDYEEFVKMMLLI 147
           QMV EADLDGDGLIDYEEFVKMMLLI
Sbjct: 121 QMVYEADLDGDGLIDYEEFVKMMLLI 146

[Close]

BLAST of CsaV3_2G004190.1 vs. NCBI nr
Match: KAA0063613.1 (calmodulin-like protein 8 [Cucumis melo var. makuwa] >TYK18413.1 calmodulin-like protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 283.1 bits (723), Expect = 1.4e-72
Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60
           MSEEQIISEFQEAFCLLDKDGDGCITI ELATAIRSLHHNPTEEELQIMMNEVDVNGNGY
Sbjct: 1   MSEEQIISEFQEAFCLLDKDGDGCITIEELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60

Query: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120
           IEFGEFFNLMAKKMKENEAE+ELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE
Sbjct: 61  IEFGEFFNLMAKKMKENEAEEELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120

Query: 121 QMVNEADLDGDGLIDYEEFVKMMLLI 147
           QMV EADLDGDGL+DYEEFVKMMLLI
Sbjct: 121 QMVYEADLDGDGLVDYEEFVKMMLLI 146

[Close]

BLAST of CsaV3_2G004190.1 vs. NCBI nr
Match: XP_038890963.1 (calmodulin-like protein 8 [Benincasa hispida])

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 135/146 (92.47%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60
           MSEEQIISEFQEAFCLLDKDGDGCITI ELATAIRSLHHNPTEEELQ+MMNEVDVNGNG 
Sbjct: 1   MSEEQIISEFQEAFCLLDKDGDGCITIEELATAIRSLHHNPTEEELQMMMNEVDVNGNGS 60

Query: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120
           IEFGEFFNLMAKKMKENEAE+EL EAFK+FDMD+DG ISP+ELK+VMIHMVEKLTDEE+E
Sbjct: 61  IEFGEFFNLMAKKMKENEAEEELSEAFKLFDMDEDGYISPDELKHVMIHMVEKLTDEEVE 120

Query: 121 QMVNEADLDGDGLIDYEEFVKMMLLI 147
           QMVNEADLDGDGLIDYEEFVKMMLLI
Sbjct: 121 QMVNEADLDGDGLIDYEEFVKMMLLI 146

[Close]

BLAST of CsaV3_2G004190.1 vs. NCBI nr
Match: KAG7030302.1 (Calmodulin-like protein 8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 258.5 bits (659), Expect = 3.6e-65
Identity = 133/146 (91.10%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60
           MSEEQI+ EFQEAFCLLDKDGDGCITI ELATAIRSLH NPTEEELQIMMNEVDVNG+G 
Sbjct: 1   MSEEQIL-EFQEAFCLLDKDGDGCITIKELATAIRSLHQNPTEEELQIMMNEVDVNGSGS 60

Query: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120
           IEF EFFNLMAKKMKENEAE+ELREAFKVFDMD DG ISPNELKNVMIHMVEKLTDEE+E
Sbjct: 61  IEFEEFFNLMAKKMKENEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVE 120

Query: 121 QMVNEADLDGDGLIDYEEFVKMMLLI 147
           QMV EADLDGDGLIDYEEF KMMLLI
Sbjct: 121 QMVKEADLDGDGLIDYEEFAKMMLLI 145

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BLAST of CsaV3_2G004190.1 vs. ExPASy Swiss-Prot
Match: O23320 (Calmodulin-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=CML8 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.9e-48
Identity = 93/140 (66.43%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 7   ISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGYIEFGEF 66
           I+EF+EAFCL DKDGDGCIT+ ELAT IRSL  NPTE+EL  ++ E+D + NG IEF EF
Sbjct: 11  ITEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEQELHDIITEIDSDSNGTIEFAEF 70

Query: 67  FNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIEQMVNEA 126
            NLMAKK++E++AE+EL+EAFKVFD D +G IS +EL +VMI++ EKLTDEE+EQM+ EA
Sbjct: 71  LNLMAKKLQESDAEEELKEAFKVFDKDQNGYISASELSHVMINLGEKLTDEEVEQMIKEA 130

Query: 127 DLDGDGLIDYEEFVKMMLLI 147
           DLDGDG ++Y+EFVKMM+ I
Sbjct: 131 DLDGDGQVNYDEFVKMMINI 150

[Close]

BLAST of CsaV3_2G004190.1 vs. ExPASy Swiss-Prot
Match: Q9LIK5 (Calmodulin-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=CML11 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.4e-48
Identity = 92/145 (63.45%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60
           +++EQI+ EF+EAFCL DKDGDGCIT +ELAT IRSL  NPTE+ELQ M+ E+D +GNG 
Sbjct: 28  LTQEQIM-EFKEAFCLFDKDGDGCITADELATVIRSLDQNPTEQELQDMITEIDSDGNGT 87

Query: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120
           IEF EF NLMA +++E +A++EL+EAFKVFD D +G IS +EL++VMI++ EKLTDEE++
Sbjct: 88  IEFSEFLNLMANQLQETDADEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVD 147

Query: 121 QMVNEADLDGDGLIDYEEFVKMMLL 146
           QM+ EADLDGDG ++Y+EFV+MM++
Sbjct: 148 QMIKEADLDGDGQVNYDEFVRMMMI 171

[Close]

BLAST of CsaV3_2G004190.1 vs. ExPASy Swiss-Prot
Match: P0DH95 (Calmodulin-1 OS=Arabidopsis thaliana OX=3702 GN=CAM1 PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.7e-46
Identity = 93/144 (64.58%), Postives = 119/144 (82.64%), Query Frame = 0


Query: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60
           +++EQ ISEF+EAF L DKDGDGCIT  EL T +RSL  NPTE ELQ M+NEVD +GNG 
Sbjct: 5   LTDEQ-ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 64

Query: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120
           I+F EF NLMAKKMK+ ++E+EL+EAF+VFD D +G IS  EL++VM ++ EKLTDEE+E
Sbjct: 65  IDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVE 124

Query: 121 QMVNEADLDGDGLIDYEEFVKMML 145
           +M+ EAD+DGDG I+YEEFVK+M+
Sbjct: 125 EMIREADVDGDGQINYEEFVKIMM 147

[Close]

BLAST of CsaV3_2G004190.1 vs. ExPASy Swiss-Prot
Match: P0DH96 (Calmodulin-4 OS=Arabidopsis thaliana OX=3702 GN=CAM4 PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.7e-46
Identity = 93/144 (64.58%), Postives = 119/144 (82.64%), Query Frame = 0


Query: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60
           +++EQ ISEF+EAF L DKDGDGCIT  EL T +RSL  NPTE ELQ M+NEVD +GNG 
Sbjct: 5   LTDEQ-ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 64

Query: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120
           I+F EF NLMAKKMK+ ++E+EL+EAF+VFD D +G IS  EL++VM ++ EKLTDEE+E
Sbjct: 65  IDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVE 124

Query: 121 QMVNEADLDGDGLIDYEEFVKMML 145
           +M+ EAD+DGDG I+YEEFVK+M+
Sbjct: 125 EMIREADVDGDGQINYEEFVKIMM 147

[Close]

BLAST of CsaV3_2G004190.1 vs. ExPASy Swiss-Prot
Match: P04464 (Calmodulin OS=Triticum aestivum OX=4565 PE=1 SV=3)

HSP 1 Score: 185.3 bits (469), Expect = 5.1e-46
Identity = 91/144 (63.19%), Postives = 119/144 (82.64%), Query Frame = 0


Query: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60
           +++EQ I+EF+EAF L DKDGDGCIT  EL T +RSL  NPTE ELQ M+NEVD +GNG 
Sbjct: 5   LTDEQ-IAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 64

Query: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120
           I+F EF NLMA+KMK+ ++E+EL+EAF+VFD D DG IS  EL++VM ++ EKLTDEE++
Sbjct: 65  IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQDGFISAAELRHVMTNLGEKLTDEEVD 124

Query: 121 QMVNEADLDGDGLIDYEEFVKMML 145
           +M+ EAD+DGDG I+YEEFVK+M+
Sbjct: 125 EMIREADVDGDGQINYEEFVKVMM 147

[Close]

BLAST of CsaV3_2G004190.1 vs. ExPASy TrEMBL
Match: A0A0A0LFI9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G011480 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.1e-75
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60
           MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY
Sbjct: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60

Query: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120
           IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE
Sbjct: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120

Query: 121 QMVNEADLDGDGLIDYEEFVKMMLLI 147
           QMVNEADLDGDGLIDYEEFVKMMLLI
Sbjct: 121 QMVNEADLDGDGLIDYEEFVKMMLLI 146

[Close]

BLAST of CsaV3_2G004190.1 vs. ExPASy TrEMBL
Match: A0A1S3C386 (calmodulin-like protein 8 OS=Cucumis melo OX=3656 GN=LOC103495973 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 5.1e-73
Identity = 143/146 (97.95%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60
           MSEEQIISEFQEAFCLLDKDGDGCITI ELATAIRSLHHNPTEEELQIMMNEVDVNGNGY
Sbjct: 1   MSEEQIISEFQEAFCLLDKDGDGCITIEELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60

Query: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120
           IEFGEFFNLMAKKMKENEAE+ELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE
Sbjct: 61  IEFGEFFNLMAKKMKENEAEEELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120

Query: 121 QMVNEADLDGDGLIDYEEFVKMMLLI 147
           QMV EADLDGDGLIDYEEFVKMMLLI
Sbjct: 121 QMVYEADLDGDGLIDYEEFVKMMLLI 146

[Close]

BLAST of CsaV3_2G004190.1 vs. ExPASy TrEMBL
Match: A0A5D3D4E4 (Calmodulin-like protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001380 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.6e-73
Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60
           MSEEQIISEFQEAFCLLDKDGDGCITI ELATAIRSLHHNPTEEELQIMMNEVDVNGNGY
Sbjct: 1   MSEEQIISEFQEAFCLLDKDGDGCITIEELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60

Query: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120
           IEFGEFFNLMAKKMKENEAE+ELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE
Sbjct: 61  IEFGEFFNLMAKKMKENEAEEELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120

Query: 121 QMVNEADLDGDGLIDYEEFVKMMLLI 147
           QMV EADLDGDGL+DYEEFVKMMLLI
Sbjct: 121 QMVYEADLDGDGLVDYEEFVKMMLLI 146

[Close]

BLAST of CsaV3_2G004190.1 vs. ExPASy TrEMBL
Match: A0A6J1G467 (calmodulin-like protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111450628 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 6.6e-65
Identity = 132/146 (90.41%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60
           MSEEQI+ EFQEAFCLLDKDGDGCITI ELATAIRSLH NPTEEELQIMMNEVDVNG+G 
Sbjct: 1   MSEEQIL-EFQEAFCLLDKDGDGCITIKELATAIRSLHQNPTEEELQIMMNEVDVNGSGS 60

Query: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120
           IEF EFFNLM KKMKENEAE+ELREAFKVFDMD DG ISPNELKNVMIHMVEKLTDEE+E
Sbjct: 61  IEFEEFFNLMEKKMKENEAEEELREAFKVFDMDQDGFISPNELKNVMIHMVEKLTDEEVE 120

Query: 121 QMVNEADLDGDGLIDYEEFVKMMLLI 147
           QMV EADLDGDGLIDYEEF KMMLLI
Sbjct: 121 QMVKEADLDGDGLIDYEEFAKMMLLI 145

[Close]

BLAST of CsaV3_2G004190.1 vs. ExPASy TrEMBL
Match: A0A6J1KFB0 (calmodulin-like protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111493791 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.9e-64
Identity = 130/146 (89.04%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60
           MSEEQI+ EFQEAFCLLDKDGDGCITI ELATAIRSLH NPTEEELQ+MMNEVD+NG+G 
Sbjct: 1   MSEEQIL-EFQEAFCLLDKDGDGCITIKELATAIRSLHQNPTEEELQMMMNEVDINGSGS 60

Query: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120
           IEF EFFNLMAKKMKENEAE+ELREAFKVFDMD DG ISPNELK+VMIHMVEKLTDEE+E
Sbjct: 61  IEFEEFFNLMAKKMKENEAEEELREAFKVFDMDQDGFISPNELKHVMIHMVEKLTDEEVE 120

Query: 121 QMVNEADLDGDGLIDYEEFVKMMLLI 147
           QMV EADLDGDGLIDYEEF KMMLLI
Sbjct: 121 QMVKEADLDGDGLIDYEEFAKMMLLI 145

[Close]

BLAST of CsaV3_2G004190.1 vs. TAIR 10
Match: AT4G14640.1 (calmodulin 8 )

HSP 1 Score: 193.4 bits (490), Expect = 1.3e-49
Identity = 93/140 (66.43%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 7   ISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGYIEFGEF 66
           I+EF+EAFCL DKDGDGCIT+ ELAT IRSL  NPTE+EL  ++ E+D + NG IEF EF
Sbjct: 11  ITEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEQELHDIITEIDSDSNGTIEFAEF 70

Query: 67  FNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIEQMVNEA 126
            NLMAKK++E++AE+EL+EAFKVFD D +G IS +EL +VMI++ EKLTDEE+EQM+ EA
Sbjct: 71  LNLMAKKLQESDAEEELKEAFKVFDKDQNGYISASELSHVMINLGEKLTDEEVEQMIKEA 130

Query: 127 DLDGDGLIDYEEFVKMMLLI 147
           DLDGDG ++Y+EFVKMM+ I
Sbjct: 131 DLDGDGQVNYDEFVKMMINI 150

[Close]

BLAST of CsaV3_2G004190.1 vs. TAIR 10
Match: AT3G22930.1 (calmodulin-like 11 )

HSP 1 Score: 193.0 bits (489), Expect = 1.7e-49
Identity = 92/145 (63.45%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60
           +++EQI+ EF+EAFCL DKDGDGCIT +ELAT IRSL  NPTE+ELQ M+ E+D +GNG 
Sbjct: 28  LTQEQIM-EFKEAFCLFDKDGDGCITADELATVIRSLDQNPTEQELQDMITEIDSDGNGT 87

Query: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120
           IEF EF NLMA +++E +A++EL+EAFKVFD D +G IS +EL++VMI++ EKLTDEE++
Sbjct: 88  IEFSEFLNLMANQLQETDADEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVD 147

Query: 121 QMVNEADLDGDGLIDYEEFVKMMLL 146
           QM+ EADLDGDG ++Y+EFV+MM++
Sbjct: 148 QMIKEADLDGDGQVNYDEFVRMMMI 171

[Close]

BLAST of CsaV3_2G004190.1 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 )

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-47
Identity = 93/144 (64.58%), Postives = 119/144 (82.64%), Query Frame = 0


Query: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60
           +++EQ ISEF+EAF L DKDGDGCIT  EL T +RSL  NPTE ELQ M+NEVD +GNG 
Sbjct: 5   LTDEQ-ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 64

Query: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120
           I+F EF NLMAKKMK+ ++E+EL+EAF+VFD D +G IS  EL++VM ++ EKLTDEE+E
Sbjct: 65  IDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVE 124

Query: 121 QMVNEADLDGDGLIDYEEFVKMML 145
           +M+ EAD+DGDG I+YEEFVK+M+
Sbjct: 125 EMIREADVDGDGQINYEEFVKIMM 147

[Close]

BLAST of CsaV3_2G004190.1 vs. TAIR 10
Match: AT5G37780.1 (calmodulin 1 )

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-47
Identity = 93/144 (64.58%), Postives = 119/144 (82.64%), Query Frame = 0


Query: 1   MSEEQIISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGY 60
           +++EQ ISEF+EAF L DKDGDGCIT  EL T +RSL  NPTE ELQ M+NEVD +GNG 
Sbjct: 5   LTDEQ-ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 64

Query: 61  IEFGEFFNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIE 120
           I+F EF NLMAKKMK+ ++E+EL+EAF+VFD D +G IS  EL++VM ++ EKLTDEE+E
Sbjct: 65  IDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVE 124

Query: 121 QMVNEADLDGDGLIDYEEFVKMML 145
           +M+ EAD+DGDG I+YEEFVK+M+
Sbjct: 125 EMIREADVDGDGQINYEEFVKIMM 147

[Close]

BLAST of CsaV3_2G004190.1 vs. TAIR 10
Match: AT2G41110.1 (calmodulin 2 )

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-46
Identity = 89/138 (64.49%), Postives = 114/138 (82.61%), Query Frame = 0


Query: 7   ISEFQEAFCLLDKDGDGCITINELATAIRSLHHNPTEEELQIMMNEVDVNGNGYIEFGEF 66
           ISEF+EAF L DKDGDGCIT  EL T +RSL  NPTE ELQ M+NEVD +GNG I+F EF
Sbjct: 10  ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69

Query: 67  FNLMAKKMKENEAEDELREAFKVFDMDDDGKISPNELKNVMIHMVEKLTDEEIEQMVNEA 126
            NLMA+KMK+ ++E+EL+EAF+VFD D +G IS  EL++VM ++ EKLTDEE+++M+ EA
Sbjct: 70  LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEA 129

Query: 127 DLDGDGLIDYEEFVKMML 145
           D+DGDG I+YEEFVK+M+
Sbjct: 130 DVDGDGQINYEEFVKVMM 147

The following BLAST results are available for this feature:

BLAST of CsaV3_2G004190.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648759.1	8.5e-75	100.00	calmodulin-like protein 8 [Cucumis sativus] >KGN60815.1 hypothetical protein Csa...	[more]
XP_008455900.1	1.0e-72	97.95	PREDICTED: calmodulin-like protein 8 [Cucumis melo]	[more]
KAA0063613.1	1.4e-72	97.26	calmodulin-like protein 8 [Cucumis melo var. makuwa] >TYK18413.1 calmodulin-like...	[more]
XP_038890963.1	1.2e-68	92.47	calmodulin-like protein 8 [Benincasa hispida]	[more]
KAG7030302.1	3.6e-65	91.10	Calmodulin-like protein 8, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CsaV3_2G004190.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23320	1.9e-48	66.43	Calmodulin-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=CML8 PE=1 SV=1	[more]
Q9LIK5	2.4e-48	63.45	Calmodulin-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=CML11 PE=2 SV=1	[more]
P0DH95	1.7e-46	64.58	Calmodulin-1 OS=Arabidopsis thaliana OX=3702 GN=CAM1 PE=1 SV=1	[more]
P0DH96	1.7e-46	64.58	Calmodulin-4 OS=Arabidopsis thaliana OX=3702 GN=CAM4 PE=1 SV=1	[more]
P04464	5.1e-46	63.19	Calmodulin OS=Triticum aestivum OX=4565 PE=1 SV=3	[more]

BLAST of CsaV3_2G004190.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFI9	4.1e-75	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G011480 PE=4 SV=1	[more]
A0A1S3C386	5.1e-73	97.95	calmodulin-like protein 8 OS=Cucumis melo OX=3656 GN=LOC103495973 PE=4 SV=1	[more]
A0A5D3D4E4	6.6e-73	97.26	Calmodulin-like protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1G467	6.6e-65	90.41	calmodulin-like protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111450628 PE=4 SV=...	[more]
A0A6J1KFB0	1.9e-64	89.04	calmodulin-like protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111493791 PE=4 SV=1	[more]

BLAST of CsaV3_2G004190.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14640.1	1.3e-49	66.43	calmodulin 8	[more]
AT3G22930.1	1.7e-49	63.45	calmodulin-like 11	[more]
AT1G66410.1	1.2e-47	64.58	calmodulin 4	[more]
AT5G37780.1	1.2e-47	64.58	calmodulin 1	[more]
AT2G41110.1	1.4e-46	64.49	calmodulin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 82..110 e-value: 2.1E-6 score: 37.3 coord: 9..37 e-value: 3.3E-6 score: 36.6 coord: 45..73 e-value: 3.7E-5 score: 33.1 coord: 118..146 e-value: 2.7E-4 score: 30.3
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 9..70 e-value: 4.7E-14 score: 52.6 coord: 81..143 e-value: 8.8E-16 score: 58.1
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 41..76 score: 13.313904
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 114..146 score: 14.736568
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 78..113 score: 16.18713
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 5..40 score: 14.42972
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 82..143 e-value: 1.14334E-19 score: 75.2769
None	No IPR available	GENE3D	1.10.238.10		coord: 1..72 e-value: 2.1E-25 score: 90.6
None	No IPR available	GENE3D	1.10.238.10		coord: 73..119 e-value: 7.7E-19 score: 69.3
None	No IPR available	GENE3D	1.10.238.10		coord: 120..145 e-value: 1.4E-6 score: 30.2
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 3..145
None	No IPR available	PANTHER	PTHR23050:SF378	CALMODULIN	coord: 3..145
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 91..103
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 18..30
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 127..139
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 54..66
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 5..144

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_2G004190	CsaV3_2G004190	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G004190.1.exon1	CsaV3_2G004190.1.exon1	exon
CsaV3_2G004190.1.exon2	CsaV3_2G004190.1.exon2	exon
CsaV3_2G004190.1.exon3	CsaV3_2G004190.1.exon3	exon
CsaV3_2G004190.1.exon4	CsaV3_2G004190.1.exon4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G004190.1.cds1	CsaV3_2G004190.1.cds1	CDS
CsaV3_2G004190.1.cds2	CsaV3_2G004190.1.cds2	CDS
CsaV3_2G004190.1.cds3	CsaV3_2G004190.1.cds3	CDS
CsaV3_2G004190.1.cds4	CsaV3_2G004190.1.cds4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G004190.1	CsaV3_2G004190.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding