CsaV3_1G034630.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G034630.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Maternal effect embryo arrest 60
Location	chr1: 21736674 .. 21739758 (-)
Sequence length	636
RNA-Seq Expression	CsaV3_1G034630.1
Synteny	CsaV3_1G034630.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGTCGTTCCACGGCGGCGATCCACCTCCACCAGAATCCACATCCTCGCCCTCGACGGCATCGTTAACGTCAACTCCCTCTTCACCTTCGCCGTTTTCCTTGGCGTGGCGTGGTACCCCACCGCCAACCCGGCTGCCAATCTCCTCCCGGACGACGACGACGGTCCTTGCGCTGCTGCCGATTCTGTCGCCGAAAATCTCATAGCCTGCCATGTATACTCTTTCAGCTGCTTCTTGTTCTCCAGCCTAATCGCGTCGGCGCTGAAGCAAGCAATCAGACTCATCACAGGCGGTGATGGTGGGCAGGGTGAGACCCACGCACCGGCGCTGAGGGTGGGGATGATGGCGTCTGCGGTTGGGTCGGTTCTCGGGTGTGGGTTTTTGGTGGCGGCGTTGCTGAATTTGATTCAGATAAAACTGGGGGTTTTCGGTTGCCGGAGGTGGGAGACGGTGGCGGCCGCCGTGCCGTTGGTGAGCTTGGTTCCTTTGGCGCTTTTCATTTACATCGCGCTTGTTATTCACGCCTTCACGCGCTAGCATTCATTTTTTCATTTTTTTACATTAATGTTTACTTTTTTTAAAAAAAAATAATTTAGTTAAATGCTTCATTGTGGTTACAAGAATACGTCTGTGTGTGTATGTAACTTATAAAAGCTTTTAAGTTGTAAATTCATGTGTAAAAATGTGACAGCTTCTGCGACCTTAGTTTCGTATTAGTTTATGATTCAATTTTCAAGTCGGTAAGAAATCGTAGAAAATCATTGTGTGTTCAAATGTTGATCTCAACTATAAATATGAAACATCATAATTTAAGAGCGTAAATATGTTCAACTAATAAATTATATAATTTTCTCACTTTATGAGGGTATGAATTGAGGTGGTTACACGTCAAATGGAGTATCTTTTTTATAGATTGGTGAGATCAAGACTATAAATTAATTAAAACATCAAAACTTATCTGAGTAGATAGTAGATACACAATGAATAACTTCCTTTCTACTTTTTAAACTCTAAATTTGTCATTCACTTCAAAATAACTTCCTTTCTACTTTTTAAACTCTAAATTTGTCATTCACTTCAAATGGTTATAATTATAACCAAGTTATATATATATATATGTGTATATATATATATATATATATATATATTTTTGACAGTATTCATGGTTGAATTTTAACCATTTGAATTAAGTGGAATTCTTTAGAAGGATTATTTATGAGAAACTTTTCACCAAAGACAGCAAAACATAAGAGAAACAGCAAAGCTTTCTTCTTTTTTTTTTTCTTTTTTAATATAAGAGAAATCAGAGAAAAGAAAATACAGAGAACTCCACACCATTTTCAAATGTAAGTAAAAACCAAACAGGAAATTTGAAATGGTATACACAATATGTAATGTAAAACAAATACCCAACTTCAAAGCTTCATCTGTGCTCTGCTGCTTTTTATGAATTCCTGCATTGAAAAAAACTAAGCCATTTCAAGGATACCACAAATACAAAATGTGTTGAACAGAAATGTAAGCCGATAGAGGAACAGAGTAAAACAGACCAAACCAACCACAAAAATAAAATGTGTTGCATAATACAAATTGTCCCATTGCCCACACAGCTCGCTTCACCCTCAAACCATCGCATCGCATCCCATAATTAAAGAGCCTACTACCTCAAACCAACAAACGGCCCAACCCATGATTTCAAGTTGGAGGAATCTCTTTACAAGAAGGGGTCCCAGCTATACGAAATAGTACCTATAGAATAACTGCAAAGAAAAAAACTATGGAAAACATCTCACAAGGGACCGTAACTCTCTAGAATCCCTCCTCTCAATACCCCTAAAAACCCGATTGTTCAAGATTAAAGCTAAATAGGGAGTGTTCAATTCTAGCCACCTACCTAAATCTAATATCCAATAAATTTCTTTGACGCTAAAATGTCGTAGAATCAAGAGGTTTGTCCTGTGCAAGCTAGCTCGAACACTTACAAATTTCGAACAAAAATGGAACGTCTCAAGCTAAAAGACAGAAAATTTTACTGCCATCTAAGCTTTTTTCTTACATCTGTTGTACATTTTGGAAGTAATAAGAAATGATATGATATAGTGTTAGACATGTCTCGAAAAGTTGAAAAACATGAAAAGAATTCTACCTTTTTCCGTGAGATCTATTTATAATTGTAGAAACATTATTAAAACATAAGAATTGGATCATCTTTTAATCCTTTTTCCTTATACCATGAGGAGTTCGGTATCTCTCATATAAATGTGTTCAAATGGAAATATGGTTCAAATGCTTTGCATCCATCCTTTAAAGCAAAAGGAAAAGATTCTATTGGTCAATGCTATTAAACCAAACACTAAAGAATATATGGATGGAAAGAAATGATAGATTTTCTTTTTCCCACAAAGCCAAGAAATAGGTAGTGGGAGTAGGAGGAATGGGCAAAATTCAACGATTCTCTTGGATATTAAGGCAAACAAAGAGTCTTTGTATCTATCTTTTTTTTTTTTTTTTTCCTCTTCTCTAAGTTTAACTATTGCAGACTTGAAAGATCCAACCATCAACCAAGGATAGTCATTAATTCCGAATCCCCTAAGCTATACTCGGGTTATGAAGAGTCTTGTATTTGTACACCATCCAATATCGACGCGCAAATCAGGGAAGAAAGTTTGAGGTACAGTTTTTTGAGAAATAGTTTTATATTTTATGCATCTGTTTATAATTTTTCACATTCAATAGGAAAACCTTGTTTCTCATGATCTAAAAGAGAGCAAAAATAAAACAAGAAACATCATTAAATTACGTATATCTAAAACATCAAAAATAAGAAACAACTTTACCAAACAACTCCTATACCTTCGCACAACAGTGACATAGAAAAGTCATGGGATTTAATAAATTAAATCATAGATTAGATGATAATTTGACTAAATGTCTGAAATTTCCTATTTATTTGGTATATTAGTGGGGCTACAAGGAAGCAGGTTTTAAGCTTTCACATTATATCAAGTGGGTGAAAACTGAATACAAGGGCGATGGAAGTTTAACAACGTTGGTCCCAGTTGATTCTCTATGCTTAAAATAA

mRNA sequence

ATGTCCGTCGTTCCACGGCGGCGATCCACCTCCACCAGAATCCACATCCTCGCCCTCGACGGCATCGTTAACGTCAACTCCCTCTTCACCTTCGCCGTTTTCCTTGGCGTGGCGTGGTACCCCACCGCCAACCCGGCTGCCAATCTCCTCCCGGACGACGACGACGGTCCTTGCGCTGCTGCCGATTCTGTCGCCGAAAATCTCATAGCCTGCCATGTATACTCTTTCAGCTGCTTCTTGTTCTCCAGCCTAATCGCGTCGGCGCTGAAGCAAGCAATCAGACTCATCACAGGCGGTGATGGTGGGCAGGGTGAGACCCACGCACCGGCGCTGAGGGTGGGGATGATGGCGTCTGCGGTTGGGTCGGTTCTCGGGTGTGGGTTTTTGGTGGCGGCGTTGCTGAATTTGATTCAGATAAAACTGGGGGTTTTCGGTTGCCGGAGGTGGGAGACGGTGGCGGCCGCCGTGCCGTTGGTGAGCTTGGTTCCTTTGGCGCTTTTCATTTACATCGCGCTTTGGGGCTACAAGGAAGCAGGTTTTAAGCTTTCACATTATATCAAGTGGGTGAAAACTGAATACAAGGGCGATGGAAGTTTAACAACGTTGGTCCCAGTTGATTCTCTATGCTTAAAATAA

Coding sequence (CDS)

ATGTCCGTCGTTCCACGGCGGCGATCCACCTCCACCAGAATCCACATCCTCGCCCTCGACGGCATCGTTAACGTCAACTCCCTCTTCACCTTCGCCGTTTTCCTTGGCGTGGCGTGGTACCCCACCGCCAACCCGGCTGCCAATCTCCTCCCGGACGACGACGACGGTCCTTGCGCTGCTGCCGATTCTGTCGCCGAAAATCTCATAGCCTGCCATGTATACTCTTTCAGCTGCTTCTTGTTCTCCAGCCTAATCGCGTCGGCGCTGAAGCAAGCAATCAGACTCATCACAGGCGGTGATGGTGGGCAGGGTGAGACCCACGCACCGGCGCTGAGGGTGGGGATGATGGCGTCTGCGGTTGGGTCGGTTCTCGGGTGTGGGTTTTTGGTGGCGGCGTTGCTGAATTTGATTCAGATAAAACTGGGGGTTTTCGGTTGCCGGAGGTGGGAGACGGTGGCGGCCGCCGTGCCGTTGGTGAGCTTGGTTCCTTTGGCGCTTTTCATTTACATCGCGCTTTGGGGCTACAAGGAAGCAGGTTTTAAGCTTTCACATTATATCAAGTGGGTGAAAACTGAATACAAGGGCGATGGAAGTTTAACAACGTTGGTCCCAGTTGATTCTCTATGCTTAAAATAA

Protein sequence

MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAAADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAVGSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIALWGYKEAGFKLSHYIKWVKTEYKGDGSLTTLVPVDSLCLK*

Homology

[Close]

BLAST of CsaV3_1G034630.1 vs. NCBI nr
Match: KAE8653265.1 (hypothetical protein Csa_020061 [Cucumis sativus] >KAE8653271.1 hypothetical protein Csa_023219 [Cucumis sativus])

HSP 1 Score: 417.2 bits (1071), Expect = 8.7e-113
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60
           MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA
Sbjct: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60

Query: 61  ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAV 120
           ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAV
Sbjct: 61  ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAV 120

Query: 121 GSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIALWGYKEAGF 180
           GSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIALWGYKEAGF
Sbjct: 121 GSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIALWGYKEAGF 180

Query: 181 KLSHYIKWVKTEYKGDGSLTTLVPVDSLCLK 212
           KLSHYIKWVKTEYKGDGSLTTLVPVDSLCLK
Sbjct: 181 KLSHYIKWVKTEYKGDGSLTTLVPVDSLCLK 211

[Close]

BLAST of CsaV3_1G034630.1 vs. NCBI nr
Match: XP_011658339.1 (uncharacterized protein LOC101206623 [Cucumis sativus] >XP_031741170.1 uncharacterized protein LOC116403759 [Cucumis sativus])

HSP 1 Score: 332.0 bits (850), Expect = 3.7e-87
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60
           MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA
Sbjct: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60

Query: 61  ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAV 120
           ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAV
Sbjct: 61  ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAV 120

Query: 121 GSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIAL 173
           GSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIAL
Sbjct: 121 GSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIAL 172

[Close]

BLAST of CsaV3_1G034630.1 vs. NCBI nr
Match: XP_008457431.1 (PREDICTED: uncharacterized protein LOC103497122 [Cucumis melo] >TYJ97365.1 uncharacterized protein E5676_scaffold194G001760 [Cucumis melo var. makuwa])

HSP 1 Score: 322.8 bits (826), Expect = 2.2e-84
Identity = 165/172 (95.93%), Postives = 170/172 (98.84%), Query Frame = 0


Query: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60
           MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA
Sbjct: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60

Query: 61  ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAV 120
           ADSVA+NLIACHVYSFSCFLFSSLIASALKQAIR+I GGDGGQGETHA ALRVGM+ASAV
Sbjct: 61  ADSVAQNLIACHVYSFSCFLFSSLIASALKQAIRIIVGGDGGQGETHATALRVGMVASAV 120

Query: 121 GSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIAL 173
           GSVLGCGFLVAALLNL+QIKLG+FGCRRWETVAAAVPLVSLVPLALFIYIAL
Sbjct: 121 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAAVPLVSLVPLALFIYIAL 172

[Close]

BLAST of CsaV3_1G034630.1 vs. NCBI nr
Match: KAA0031767.1 (uncharacterized protein E6C27_scaffold848G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 3.2e-83
Identity = 163/172 (94.77%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60
           MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA
Sbjct: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60

Query: 61  ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAV 120
           ADSVA+NLIACHVYSFSCFLFSSLIASALKQAIR+I GGDGGQGETHA  LRVGM+ASAV
Sbjct: 61  ADSVAQNLIACHVYSFSCFLFSSLIASALKQAIRIIVGGDGGQGETHATVLRVGMVASAV 120

Query: 121 GSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIAL 173
           GSVLGCGFLVAALLNL+QIKLG+FGCRRWETVAAAVPLVSLVP ALFIYIAL
Sbjct: 121 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAAVPLVSLVPSALFIYIAL 172

[Close]

BLAST of CsaV3_1G034630.1 vs. NCBI nr
Match: XP_022970573.1 (uncharacterized protein LOC111469508 [Cucurbita maxima])

HSP 1 Score: 290.0 bits (741), Expect = 1.6e-74
Identity = 144/172 (83.72%), Postives = 158/172 (91.86%), Query Frame = 0


Query: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60
           MSVVPRRRS+STRIH++ALDGIVNVNSLFTFAVFLG+ WYPTA+P  NLLPDDDDGPCA 
Sbjct: 1   MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAP 60

Query: 61  ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAV 120
           A + A++LIACHVYSFSCFLFSSL+ASALKQAIR+I   DGG G  HAPALRVGM+ASAV
Sbjct: 61  AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGHGAVHAPALRVGMVASAV 120

Query: 121 GSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIAL 173
           GSVLGCGFLVAALLNL+QIKLG+FGCRRWETVAA VPLVSLVP+ALFIYI L
Sbjct: 121 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVL 172

[Close]

BLAST of CsaV3_1G034630.1 vs. ExPASy TrEMBL
Match: A0A0A0LV03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525310 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.8e-87
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60
           MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA
Sbjct: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60

Query: 61  ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAV 120
           ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAV
Sbjct: 61  ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAV 120

Query: 121 GSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIAL 173
           GSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIAL
Sbjct: 121 GSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIAL 172

[Close]

BLAST of CsaV3_1G034630.1 vs. ExPASy TrEMBL
Match: A0A5D3BFZ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001760 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.1e-84
Identity = 165/172 (95.93%), Postives = 170/172 (98.84%), Query Frame = 0


Query: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60
           MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA
Sbjct: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60

Query: 61  ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAV 120
           ADSVA+NLIACHVYSFSCFLFSSLIASALKQAIR+I GGDGGQGETHA ALRVGM+ASAV
Sbjct: 61  ADSVAQNLIACHVYSFSCFLFSSLIASALKQAIRIIVGGDGGQGETHATALRVGMVASAV 120

Query: 121 GSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIAL 173
           GSVLGCGFLVAALLNL+QIKLG+FGCRRWETVAAAVPLVSLVPLALFIYIAL
Sbjct: 121 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAAVPLVSLVPLALFIYIAL 172

[Close]

BLAST of CsaV3_1G034630.1 vs. ExPASy TrEMBL
Match: A0A1S3C532 (uncharacterized protein LOC103497122 OS=Cucumis melo OX=3656 GN=LOC103497122 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.1e-84
Identity = 165/172 (95.93%), Postives = 170/172 (98.84%), Query Frame = 0


Query: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60
           MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA
Sbjct: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60

Query: 61  ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAV 120
           ADSVA+NLIACHVYSFSCFLFSSLIASALKQAIR+I GGDGGQGETHA ALRVGM+ASAV
Sbjct: 61  ADSVAQNLIACHVYSFSCFLFSSLIASALKQAIRIIVGGDGGQGETHATALRVGMVASAV 120

Query: 121 GSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIAL 173
           GSVLGCGFLVAALLNL+QIKLG+FGCRRWETVAAAVPLVSLVPLALFIYIAL
Sbjct: 121 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAAVPLVSLVPLALFIYIAL 172

[Close]

BLAST of CsaV3_1G034630.1 vs. ExPASy TrEMBL
Match: A0A5A7SQP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00060 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.6e-83
Identity = 163/172 (94.77%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60
           MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA
Sbjct: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60

Query: 61  ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAV 120
           ADSVA+NLIACHVYSFSCFLFSSLIASALKQAIR+I GGDGGQGETHA  LRVGM+ASAV
Sbjct: 61  ADSVAQNLIACHVYSFSCFLFSSLIASALKQAIRIIVGGDGGQGETHATVLRVGMVASAV 120

Query: 121 GSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIAL 173
           GSVLGCGFLVAALLNL+QIKLG+FGCRRWETVAAAVPLVSLVP ALFIYIAL
Sbjct: 121 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAAVPLVSLVPSALFIYIAL 172

[Close]

BLAST of CsaV3_1G034630.1 vs. ExPASy TrEMBL
Match: A0A6J1I4A7 (uncharacterized protein LOC111469508 OS=Cucurbita maxima OX=3661 GN=LOC111469508 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 7.8e-75
Identity = 144/172 (83.72%), Postives = 158/172 (91.86%), Query Frame = 0


Query: 1   MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 60
           MSVVPRRRS+STRIH++ALDGIVNVNSLFTFAVFLG+ WYPTA+P  NLLPDDDDGPCA 
Sbjct: 1   MSVVPRRRSSSTRIHVMALDGIVNVNSLFTFAVFLGITWYPTADPTVNLLPDDDDGPCAP 60

Query: 61  ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAV 120
           A + A++LIACHVYSFSCFLFSSL+ASALKQAIR+I   DGG G  HAPALRVGM+ASAV
Sbjct: 61  AAAAAQSLIACHVYSFSCFLFSSLVASALKQAIRIIGSEDGGHGAVHAPALRVGMVASAV 120

Query: 121 GSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIAL 173
           GSVLGCGFLVAALLNL+QIKLG+FGCRRWETVAA VPLVSLVP+ALFIYI L
Sbjct: 121 GSVLGCGFLVAALLNLVQIKLGIFGCRRWETVAAVVPLVSLVPMALFIYIVL 172

[Close]

BLAST of CsaV3_1G034630.1 vs. TAIR 10
Match: AT5G05950.1 (maternal effect embryo arrest 60 )

HSP 1 Score: 152.9 bits (385), Expect = 2.9e-37
Identity = 96/174 (55.17%), Postives = 116/174 (66.67%), Query Frame = 0


Query: 11  STRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAAADSVAENLIA 70
           +T IHI ALDGIVNVNSLFT AVF+G+AW PT +P  +L+ D +   C     +AENL+A
Sbjct: 2   TTSIHITALDGIVNVNSLFTLAVFIGLAWNPT-DPDNSLVTDPN---CVPTARMAENLVA 61

Query: 71  CHVYSFSCFLFSSLIASALKQAIRL--------ITGGDGGQGETHAPALRVGMMASAVGS 130
            HVYSF+ FLFSSLIA  LKQA+RL         T  D      +  ALR GM+ S +GS
Sbjct: 62  FHVYSFASFLFSSLIALGLKQAMRLNIASSFHISTRIDPVVYYVNKTALRFGMVTSGLGS 121

Query: 131 VLGCGFLVAALLNLIQIKLGVFGC-RRWETVAAAVPLVSLVPLALFIYIALWGY 176
           V GCGFL+ AL+N++QIKLG  GC     T AA VPLV LVP ALFIY++L  Y
Sbjct: 122 VCGCGFLMLALINVVQIKLGTLGCGASGHTYAAVVPLVILVPSALFIYVSLMLY 171

[Close]

BLAST of CsaV3_1G034630.1 vs. TAIR 10
Match: AT3G46890.1 (BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 136.0 bits (341), Expect = 3.6e-32
Identity = 90/188 (47.87%), Postives = 119/188 (63.30%), Query Frame = 0


Query: 6   RRRSTSTRIHILALDGIVNVNSLFTFAVFLGVA-----WYPTANPAANLLPDDDDGPCAA 65
           RR   +T IH+ A+DGIVNVNSLF+ A+FLG+       +P ++ A+    +     C +
Sbjct: 13  RRLLPTTLIHVTAIDGIVNVNSLFSLALFLGLTTSGNITFPVSSSASE---NHHLRRCIS 72

Query: 66  A--DSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGG-------------DGGQGE 125
           A   ++AE L++ HVYSFS FLFSSLIA +LKQAIR  T               + G+G 
Sbjct: 73  AKGPALAERLVSSHVYSFSLFLFSSLIAMSLKQAIRTTTTTTNGNCLEEEARVLNAGEGR 132

Query: 126 THAPALRVGMMASAVGSVLGCGFLVAALLNLIQIKLGVFGCRR-WETVAAAVPLVSLVPL 173
            +  ALRVG++AS V SVLGCGFL  AL++L+QIKLG   C+R +  +AA VPLV LVP 
Sbjct: 133 VNLAALRVGIVASCVASVLGCGFLTMALVDLVQIKLGPLECKRSFHALAAIVPLVVLVPS 192

[Close]

BLAST of CsaV3_1G034630.1 vs. TAIR 10
Match: AT3G07510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27
Identity = 79/174 (45.40%), Postives = 105/174 (60.34%), Query Frame = 0


Query: 5   PRRRSTS----TRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 64
           P   STS    T +H+ ALDG+VNVNSLFT AVF+G++    A P  + L  +    C A
Sbjct: 13  PEASSTSSLATTSVHVSALDGLVNVNSLFTIAVFVGLS---LATPGQHSL--EQRSSCDA 72

Query: 65  ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQ---GETHAPALRVGMMA 124
           +  VA+ L+   V SFS FLFSSL+A  LK A+ L+   D  +      +   LR GMMA
Sbjct: 73  SADVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMA 132

Query: 125 SAVGSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIA 172
           SAVGSV+GC FL+ +++N+IQI+LG+  C       A   LV+LV  AL IYI+
Sbjct: 133 SAVGSVMGCLFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYIS 181

[Close]

BLAST of CsaV3_1G034630.1 vs. TAIR 10
Match: AT3G07510.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27
Identity = 79/174 (45.40%), Postives = 105/174 (60.34%), Query Frame = 0


Query: 5   PRRRSTS----TRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAA 64
           P   STS    T +H+ ALDG+VNVNSLFT AVF+G++    A P  + L  +    C A
Sbjct: 13  PEASSTSSLATTSVHVSALDGLVNVNSLFTIAVFVGLS---LATPGQHSL--EQRSSCDA 72

Query: 65  ADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQ---GETHAPALRVGMMA 124
           +  VA+ L+   V SFS FLFSSL+A  LK A+ L+   D  +      +   LR GMMA
Sbjct: 73  SADVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMA 132

Query: 125 SAVGSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIA 172
           SAVGSV+GC FL+ +++N+IQI+LG+  C       A   LV+LV  AL IYI+
Sbjct: 133 SAVGSVMGCLFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYIS 181

[Close]

BLAST of CsaV3_1G034630.1 vs. TAIR 10
Match: AT2G01580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-21
Identity = 62/165 (37.58%), Postives = 100/165 (60.61%), Query Frame = 0


Query: 9   STSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAAADSVAENL 68
           +++T +H+ ALDGIV+ NSLFT AVF+G+++     P+   L D  +  C+A   V  +L
Sbjct: 23  TSTTSVHVTALDGIVSANSLFTVAVFVGISF---DQPSDLTLTDRTE--CSAGRDVERDL 82

Query: 69  IACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQ---GETHAPALRVGMMASAVGSVLG 128
           +   V SF+ FLFSSL+A  +K AI L+   +  +      +   LR G++ +A GS+LG
Sbjct: 83  VVFEVISFAFFLFSSLVAQGMKLAINLLNSKETDEVFKANINRDVLRFGVVGAAGGSILG 142

Query: 129 CGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYI 171
           C FL+ +++++IQ++LG+  C     +   + LV LV  AL +YI
Sbjct: 143 CVFLLLSIVDVIQLRLGLLSCGNALAIHTVLVLVVLVSSALSVYI 182

The following BLAST results are available for this feature:

BLAST of CsaV3_1G034630.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653265.1	8.7e-113	100.00	hypothetical protein Csa_020061 [Cucumis sativus] >KAE8653271.1 hypothetical pro...	[more]
XP_011658339.1	3.7e-87	100.00	uncharacterized protein LOC101206623 [Cucumis sativus] >XP_031741170.1 uncharact...	[more]
XP_008457431.1	2.2e-84	95.93	PREDICTED: uncharacterized protein LOC103497122 [Cucumis melo] >TYJ97365.1 uncha...	[more]
KAA0031767.1	3.2e-83	94.77	uncharacterized protein E6C27_scaffold848G00060 [Cucumis melo var. makuwa]	[more]
XP_022970573.1	1.6e-74	83.72	uncharacterized protein LOC111469508 [Cucurbita maxima]	[more]

BLAST of CsaV3_1G034630.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G034630.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV03	1.8e-87	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525310 PE=4 SV=1	[more]
A0A5D3BFZ3	1.1e-84	95.93	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C532	1.1e-84	95.93	uncharacterized protein LOC103497122 OS=Cucumis melo OX=3656 GN=LOC103497122 PE=...	[more]
A0A5A7SQP6	1.6e-83	94.77	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1I4A7	7.8e-75	83.72	uncharacterized protein LOC111469508 OS=Cucurbita maxima OX=3661 GN=LOC111469508...	[more]

BLAST of CsaV3_1G034630.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05950.1	2.9e-37	55.17	maternal effect embryo arrest 60	[more]
AT3G46890.1	3.6e-32	47.87	BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TA...	[more]
AT3G07510.1	1.2e-27	45.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G07510.2	1.2e-27	45.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G01580.1	1.3e-21	37.58	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33430:SF9	BNAC03G75110D PROTEIN	coord: 3..172
None	No IPR available	PANTHER	PTHR33430	MATERNAL EFFECT EMBRYO ARREST PROTEIN	coord: 3..172

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_1G034630	CsaV3_1G034630	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_1G034630.1.exon2	CsaV3_1G034630.1.exon2	exon
CsaV3_1G034630.1.exon1	CsaV3_1G034630.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_1G034630.1.cds2	CsaV3_1G034630.1.cds2	CDS
CsaV3_1G034630.1.cds1	CsaV3_1G034630.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_1G034630.1	CsaV3_1G034630.1-protein	polypeptide