CsGy7G019780.2 (mRNA) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTATTTTCCAATTTCCGGTCGGCCTTTCACCTCGACACCACCAATTATAGTTTTTTAGAACTAAAATTTTCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCATCATCATCTCTTTCTTTCAATTCATAATCCCTAAAATTCTCCACCAGTTCCCTGTTTTTTTCATCCCATGGCTTCTCGCAGGCGCATACTTTTGAAAGTCATTATCCTTGGCGACAGTGGGTGAGCTTTCAATTTTTATTATTCTTTTTTCTTTTGTTGCATTTTGATTATGGGCTCTGTATTTCGATTGGGTTTCTTCAATTTGAGAGAATCGAAGAGAGTATGGTGTGGGAATTTGGAAACTCATAAAGCCTGTCCTGTACCGCCTTTTTTTTTACCCTGTTGTTCCTTTATTGGATGTGATGGGGGTTCTTTTTTCTTTTTCCTAATTAAGTTTCTTCAATTTTTGGCAGCGTGGGGAAGACATCGCTAATGAATCAGTATGCTTTTGAACCCAAAGCTTTGAATTTTTGGTTTGGAAGACTTTTTATTTTTCGAGTTGTTTAATTTCCTGTTGGCGCTGCTACTTTTATTTGAATGACCAGGTATGTGAATCGTAAGTTTAGCAATCAGTATAAGGCGACTATTGGAGCAGATTTTCTCACAAAGGAAGTTCAGCTCGATGACAGGTTATTTACGTTACAAGTAAGTATGGCTATAGTTGTTGTACTGTTTTCTTCTGTTGGGTATCTTTGGTGGTATGTGGATTGGGGAATGTGTTTTAGTTAATGGGCTCTGATGGTTACCGTGGTTACCAAGCGTTAACAATTCATGCTAGGATTGGTCATTCATTGGCGATCTCTTGAAATTCTAGTTTCTGCAATTGTGACGTTAAATCATAATATTTGAAATGAAAAGCAATGCAAAAAAAAAAAAAAAAATGGCAGCTGTTGATTGCTCCCTTACTCTGATAATATTTATCTTTGTCATTCCTCTCTGACTTGGTTAAATTTGAGATTGAAGTGTCACCCCTCCTTCCCTTGGTTGGAGTTTGGTTTAGTTTTATATAAATATAGTCCTGTGTTTTATTTGTTTATTTTTCGTTGAGAAGGTGGTGTGGTTTTGCCTCGTAATGTTAATGTATTGAGATGGTCGATTTACATGTGTAGTGTCAAATTGCAGATTTGGGACACAGCTGGGCAAGAACGGTTCCAAAGTCTTGGAGTGGCCTTTTACCGTGGTGCTGATTGCTGTGTTCTTGTTTATGATGTGAATGTTATGAAATCATTTGATAATCTTAACAACTGGCGAGAAGAGTTTCTAATTCAGGTTGGTGTTGATTCAGTGTAGATACTACATAGATAAAAGCCTATGGGATGTGTTTGTGCGTAATGACCTCTTGTCTTTTAATGATTAGGCTAGTCCATCTGATCCTGAAAACTTCCCTTTTGTCGTATTGGGGAACAAGGTCGACGTTGATGGTGGGAACAGTAGAGTGGTGAGTTTTGTCCAGTCTTGCTTTTATCATGGTTATCTGAATTACTAGGCCAGAGTGAGGATTTTTCTTTTCTGCTTTGGGGTAGATAATTTTCTAAGAAGGATTTGTTTGGTATTGTAGGTTTCTGAGAAGAAAGCTAAGGCGTGGTGTGCTTCAAAAGGAAACATACCATACTTTGAGACGTCTGCAAAAGAAGGACTCAATGTCGATGCTGCATTTCAGTGTATAGCTAAAAATGCCCTTAAGAATGAACCAGAAGAAGAAGTGTTAGTATATTACGCTCCATTGAAATTCAACTGCAACTTCATTCCCCTCGTGATGAAATGTTTTTATTGGTTACATATGCAGCTAAATTTTATCTTTAGAAATATTATTGAAGTAGGTTGGTAGATAACATGAATACTAGAGCATCTTAGCAAAATAAGTTAAGGAATAAAACCAAAAGGGGGAAACTGCTGTCGTCATTTTAGGGTTACATTACGTTCTTCTATATCTGCTGAAAACTTACTCCAACAGTGCTCGGGAATATCCCTTCAGATTTTCTTGTTAGGATTCAAGTTGTCAATTTGTTTAAAATATTTATTTCAAAGCATACTTGAGGGATCTCTCACGATGAAAACTGCCAGTTTTGTTATGGATATAATGAGTAGAGTTGTCCTGTGTGTAGCCATGTGCAACGCCCCAGGAAAAATCCCGATCCGAATCTTGGGCTTGGGGCATGGGTTACACCATGTCCCTGATCCAACTTAATTTTCCAAAGATTCTTCACATTCTCGATGAAGCAAGGACGGTAGCTGTATCCCTCGAAACCTTTAGAATAACACAATAGACATTGGAATGCCTGACACTCTGCATCGTTCTAATTTTTACTGGAAGTTGCTGAAGATTTGAGTGACCGACAACTGATAAATGACTCCTCAAATGAATACAGTGCTAGCACATCATGATGATACACTATCTATTTAGAATTTTCTGATCTTCATCTAACATAGTTGTTGTATTGTTCAACCTCTACAATATAGGGTTCTTGGTAGAGTTAACATCTGTTTCCTTGTAGAAGAGTTAAGAGTGAGTTGGAGTTTGTATTCCTTGCTTGTCACTAATTAGTGTTTTTTACTTTTTGGGGCAATGGCAGATACCTTCCCGACACGATTGACGTTGCAGGTGGACGGCAGCAAAGATCAACAGGGTGTGAATGCTAAAAATGTTAAACTAACTAATGGATTCTGTCTACTTCCTTCACTGTATTTTATCTGTTGAATGTTTCCTCAAACCATATGGTTCAATCATATTAACATGTAGTAGTGGTCTAGAGATTGCTGGTAAAGTGTTCTACTTCTATTCTGTGTTGTACTTGTAATAACATTCATTGATGTTTATATATTTTGCTTTAATCATTTGGGTGTCAAATAGAATAAAATACTTGAACCAATGTACAGAAGAAAATAACCTAAGTGAATATTAGGGTCACCCAAGCTTGACCCTTTGATTATTCAACATGAGAAATGTTCATCAAGAACCCTAACTTGATGCATGCTTCTTGCTGTTGATACAATCTTTGTTTGCAAGTCTCCATTAGCATATTCTGAATTGAGGTTCATAAGTTGTACTAATTGATTGTTGACCTTCCAAGTACTAAACTATTCCTAGTAAGTACTAAACTATTCCTAGTACACTAGCGTATATTATTTTCATTTAGCATTTGACACATCATTAAATGATTTATTATGCTATCATATTTTACGGATTAGCACATCATTGTTAAAGACTTCTTTTATGACAAACATTGAACGAAGGTTTTTAAAGTGTCACGAGATAAGTCAAGAGGTTTCTTTTCATTTTTTAAAATATGACCGACTCTGTTTTATCGGAGGATAGATCAC CCTATTTTCCAATTTCCGGTCGGCCTTTCACCTCGACACCACCAATTATAGTTTTTTAGAACTAAAATTTTCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCATCATCATCTCTTTCTTTCAATTCATAATCCCTAAAATTCTCCACCAGTTCCCTGTTTTTTTCATCCCATGGCTTCTCGCAGGCGCATACTTTTGAAAGTCATTATCCTTGGCGACAGTGGCGTGGGGAAGACATCGCTAATGAATCAGTATGTGAATCGTAAGTTTAGCAATCAGTATAAGGCGACTATTGGAGCAGATTTTCTCACAAAGGAAGTTCAGCTCGATGACAGGTTATTTACGTTACAAATTTGGGACACAGCTGGGCAAGAACGGTTCCAAAGTCTTGGAGTGGCCTTTTACCGTGGTGCTGATTGCTGTGTTCTTGTTTATGATGTGAATGTTATGAAATCATTTGATAATCTTAACAACTGGCGAGAAGAGTTTCTAATTCAGGCTAGTCCATCTGATCCTGAAAACTTCCCTTTTGTCGTATTGGGGAACAAGGTCGACGTTGATGGTGGGAACAGTAGAGTGGTTTCTGAGAAGAAAGCTAAGGCGTGGTGTGCTTCAAAAGGAAACATACCATACTTTGAGACGTCTGCAAAAGAAGGACTCAATGTCGATGCTGCATTTCAGTGTATAGCTAAAAATGCCCTTAAGAATGAACCAGAAGAAGAAGTGTTAGTATATTACGCTCCATTGAAATTCAACTGCAACTTCATTCCCCTCGTGATGAAATGTTTTTATTGGTTACATATGCAGCTAAATTTTATCTTTAGAAATATTATTGAAGTAGGTTGGTAGATAACATGAATACTAGAGCATCTTAGCAAAATAAGTTAAGGAATAAAACCAAAAGGGGGAAACTGCTGTCGTCATTTTAGGGTTACATTACGTTCTTCTATATCTGCTGAAAACTTACTCCAACAGTGCTCGGGAATATCCCTTCAGATTTTCTTGTTAGGATTCAAGTTGTCAATTTGTTTAAAATATTTATTTCAAAGCATACTTGAGGGATCTCTCACGATGAAAACTGCCAGTTTTGTTATGGATATAATGAGTAGAGTTGTCCTGTGTGTAGCCATGTGCAACGCCCCAGGAAAAATCCCGATCCGAATCTTGGGCTTGGGGCATGGGTTACACCATGTCCCTGATCCAACTTAATTTTCCAAAGATTCTTCACATTCTCGATGAAGCAAGGACGGTAGCTGTATCCCTCGAAACCTTTAGAATAACACAATAGACATTGGAATGCCTGACACTCTGCATCGTTCTAATTTTTACTGGAAGTTGCTGAAGATTTGAGTGACCGACAACTGATAAATGACTCCTCAAATGAATACAGTGCTAGCACATCATGATGATACACTATCTATTTAGAATTTTCTGATCTTCATCTAACATAGTTGTTGTATTGTTCAACCTCTACAATATAGGGTTCTTGGTAGAGTTAACATCTGTTTCCTTGTAGAAGAGTTAAGAGTGAGTTGGAGTTTGTATTCCTTGCTTGTCACTAATTAGTGTTTTTTACTTTTTGGGGCAATGGCAGATACCTTCCCGACACGATTGACGTTGCAGGTGGACGGCAGCAAAGATCAACAGGGTGTGAATGCTAAAAATGTTAAACTAACTAATGGATTCTGTCTACTTCCTTCACTGTATTTTATCTGTTGAATGTTTCCTCAAACCATATGGTTCAATCATATTAACATGTAGTAGTGGTCTAGAGATTGCTGGTAAAGTGTTCTACTTCTATTCTGTGTTGTACTTGTAATAACATTCATTGATGTTTATATATTTTGCTTTAATCATTTGGGTGTCAAATAGAATAAAATACTTGAACCAATGTACAGAAGAAAATAACCTAAGTGAATATTAGGGTCACCCAAGCTTGACCCTTTGATTATTCAACATGAGAAATGTTCATCAAGAACCCTAACTTGATGCATGCTTCTTGCTGTTGATACAATCTTTGTTTGCAAGTCTCCATTAGCATATTCTGAATTGAGGTTCATAAGTTGTACTAATTGATTGTTGACCTTCCAAGTACTAAACTATTCCTAGTAAGTACTAAACTATTCCTAGTACACTAGCGTATATTATTTTCATTTAGCATTTGACACATCATTAAATGATTTATTATGCTATCATATTTTACGGATTAGCACATCATTGTTAAAGACTTCTTTTATGACAAACATTGAACGAAGGTTTTTAAAGTGTCACGAGATAAGTCAAGAGGTTTCTTTTCATTTTTTAAAATATGACCGACTCTGTTTTATCGGAGGATAGATCAC ATGGCTTCTCGCAGGCGCATACTTTTGAAAGTCATTATCCTTGGCGACAGTGGCGTGGGGAAGACATCGCTAATGAATCAGTATGTGAATCGTAAGTTTAGCAATCAGTATAAGGCGACTATTGGAGCAGATTTTCTCACAAAGGAAGTTCAGCTCGATGACAGGTTATTTACGTTACAAATTTGGGACACAGCTGGGCAAGAACGGTTCCAAAGTCTTGGAGTGGCCTTTTACCGTGGTGCTGATTGCTGTGTTCTTGTTTATGATGTGAATGTTATGAAATCATTTGATAATCTTAACAACTGGCGAGAAGAGTTTCTAATTCAGGCTAGTCCATCTGATCCTGAAAACTTCCCTTTTGTCGTATTGGGGAACAAGGTCGACGTTGATGGTGGGAACAGTAGAGTGGTTTCTGAGAAGAAAGCTAAGGCGTGGTGTGCTTCAAAAGGAAACATACCATACTTTGAGACGTCTGCAAAAGAAGGACTCAATGTCGATGCTGCATTTCAGTGTATAGCTAAAAATGCCCTTAAGAATGAACCAGAAGAAGAAGTGTTAGTATATTACGCTCCATTGAAATTCAACTGCAACTTCATTCCCCTCGTGATGAAATGTTTTTATTGGTTACATATGCAGCTAAATTTTATCTTTAGAAATATTATTGAAGTAGGTTGGTAG MASRRRILLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQLDDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGLNVDAAFQCIAKNALKNEPEEEVLVYYAPLKFNCNFIPLVMKCFYWLHMQLNFIFRNIIEVGW* Homology
BLAST of CsGy7G019780.2 vs. ExPASy Swiss-Prot
Match: Q9XER8 (Ras-related protein Rab7 OS=Gossypium hirsutum OX=3635 GN=RAB7 PE=2 SV=1) HSP 1 Score: 369.4 bits (947), Expect = 2.9e-101 Identity = 178/185 (96.22%), Postives = 183/185 (98.92%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. ExPASy Swiss-Prot
Match: O24461 (Ras-related protein Rab7 OS=Prunus armeniaca OX=36596 PE=2 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 7.2e-100 Identity = 175/185 (94.59%), Postives = 181/185 (97.84%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. ExPASy Swiss-Prot
Match: Q9C820 (Ras-related protein RABG3d OS=Arabidopsis thaliana OX=3702 GN=RABG3D PE=2 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 3.6e-99 Identity = 173/184 (94.02%), Postives = 179/184 (97.28%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. ExPASy Swiss-Prot
Match: Q9LW76 (Ras-related protein RABG3c OS=Arabidopsis thaliana OX=3702 GN=RABG3C PE=2 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 1.8e-98 Identity = 172/185 (92.97%), Postives = 182/185 (98.38%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. ExPASy Swiss-Prot
Match: Q40787 (Ras-related protein Rab7 OS=Cenchrus ciliaris OX=35872 PE=2 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 2.3e-98 Identity = 174/187 (93.05%), Postives = 180/187 (96.26%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. NCBI nr
Match: XP_004141770.1 (ras-related protein Rab7 [Cucumis sativus] >KGN45377.1 hypothetical protein Csa_015677 [Cucumis sativus]) HSP 1 Score: 377 bits (968), Expect = 6.42e-131 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. NCBI nr
Match: XP_023513568.1 (ras-related protein Rab7 [Cucurbita pepo subsp. pepo] >KAG6593461.1 Ras-related protein Rab7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025801.1 Ras-related protein Rab7 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 375 bits (964), Expect = 2.61e-130 Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. NCBI nr
Match: XP_008462166.1 (PREDICTED: ras-related protein Rab7 [Cucumis melo] >XP_038896980.1 ras-related protein Rab7 [Benincasa hispida] >KAA0059302.1 ras-related protein Rab7 [Cucumis melo var. makuwa] >TYK04026.1 ras-related protein Rab7 [Cucumis melo var. makuwa]) HSP 1 Score: 375 bits (963), Expect = 3.71e-130 Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. NCBI nr
Match: XP_022964012.1 (ras-related protein Rab7 [Cucurbita moschata]) HSP 1 Score: 374 bits (961), Expect = 7.49e-130 Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. NCBI nr
Match: XP_023000393.1 (ras-related protein Rab7 [Cucurbita maxima]) HSP 1 Score: 374 bits (959), Expect = 1.51e-129 Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. ExPASy TrEMBL
Match: A0A0A0KAG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446920 PE=4 SV=1) HSP 1 Score: 377 bits (968), Expect = 3.11e-131 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. ExPASy TrEMBL
Match: A0A5A7UTR8 (Ras-related protein Rab7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002250 PE=4 SV=1) HSP 1 Score: 375 bits (963), Expect = 1.80e-130 Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. ExPASy TrEMBL
Match: A0A1S3CG87 (ras-related protein Rab7 OS=Cucumis melo OX=3656 GN=LOC103500590 PE=4 SV=1) HSP 1 Score: 375 bits (963), Expect = 1.80e-130 Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. ExPASy TrEMBL
Match: A0A6J1HGP2 (ras-related protein Rab7 OS=Cucurbita moschata OX=3662 GN=LOC111464163 PE=4 SV=1) HSP 1 Score: 374 bits (961), Expect = 3.63e-130 Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. ExPASy TrEMBL
Match: A0A6J1KMH7 (ras-related protein Rab7 OS=Cucurbita maxima OX=3661 GN=LOC111494651 PE=4 SV=1) HSP 1 Score: 374 bits (959), Expect = 7.31e-130 Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. TAIR 10
Match: AT1G52280.1 (RAB GTPase homolog G3D ) HSP 1 Score: 362.5 bits (929), Expect = 2.5e-100 Identity = 173/184 (94.02%), Postives = 179/184 (97.28%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. TAIR 10
Match: AT3G16100.1 (RAB GTPase homolog G3C ) HSP 1 Score: 360.1 bits (923), Expect = 1.3e-99 Identity = 172/185 (92.97%), Postives = 182/185 (98.38%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. TAIR 10
Match: AT3G18820.1 (RAB GTPase homolog G3F ) HSP 1 Score: 342.8 bits (878), Expect = 2.1e-94 Identity = 166/185 (89.73%), Postives = 175/185 (94.59%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. TAIR 10
Match: AT1G49300.1 (RAB GTPase homolog G3E ) HSP 1 Score: 332.0 bits (850), Expect = 3.7e-91 Identity = 159/185 (85.95%), Postives = 172/185 (92.97%), Query Frame = 0
BLAST of CsGy7G019780.2 vs. TAIR 10
Match: AT1G49300.2 (RAB GTPase homolog G3E ) HSP 1 Score: 332.0 bits (850), Expect = 3.7e-91 Identity = 159/185 (85.95%), Postives = 172/185 (92.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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