CsGy7G002550.2 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G002550.2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Exopolygalacturonase-like
Location	Gy14Chr7: 2064294 .. 2066104 (+)
Sequence length	852
RNA-Seq Expression	CsGy7G002550.2
Synteny	CsGy7G002550.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAAGTATTCGAGCTTATCGGTAACTACATTCTTGATGATATTGCTATCATTTACTATTGAGTCCCGATCTCATGTTGATGTTATTTTTCATTTGAGGAAGTATGGTAATATTGTGTCTGGCGTCGATGTCACTGAGGTATAAACACACAATAAAGTATACACCAAAGTAATATTGCTTATTGAATTAATTAATTGCTTTTGCTAACTTTTGTAGTTTTGTTACTTGTGAAACATAGGCTTTGAAAGATGCATGGAATGATGCATGTGCATCTGTTCCTCCAAGTGCTGTGATTATTCCAAAGGGAATATTTAAAGTAAGAGAAGGAGAATTTAAAGGTCCTTGCAAGAGCCCTATTGAAATGCGAGTTCGTGGAACATTGCAGGCTTTAAACCACCCTCAAGGAGATAGTTGGATTACTTTCGTATATGTTGATAGAATGAAACTATCAGGTGGAGTTTTTGATGGCCAAGGAAAGGAAGGTTGGTAAAAGAATGATTGTCATAAATGTATAAATTGTGCTAACCTCCCCATTGTAAGTCCTATACCTTTTGTTTTCTTTTCCATTGACCCCATTCGTCTTTTTTGATTTTGAAGGGGTTAGTTAGATTTTGTTTTCTATTATTTTCATTTTTACAATTTGGAAAATGCGATGTTAATATCATATGAATATTGAACTAAATTTAACCATAAAAAATTAGATGCCAAAGAGCTATTTTTTTTAAATATCAAGACTAAATATATAGAGAAAAATTATATTTTCATCCCTTCCTAAAAGTTTGTGAGTTGCCTTTTTTCACCCTCTATCTCTGACACGACTTATTGATCATATAAAATGAATAGAGCTTAAGATTCAACTTCATTACCAATTAAATTGTGAGGAGAATAACATCACTCGATAGCAAAAACTCCCATGTCAACATCCTAGGGTGCAACAACCTCACATTTCAAGGTGTCAACATAATTGCACCAGAAGATAGTCCCAACACAGATGAAATACACATTGGCCGATCAATTAGGATCTCAATCTTGAAATCTCGAATAGCAATAGGAGATGATTGCATCTCACTTGGAAATGGAAGCAAACGAGTGAAAGTCACTGATGTGACATGTGGGCCAGGTCATGGAATAAGCATAGGAAGTCTTGGAAAATACACTAACGAAGAACCGGTTGAAGGTGTCGTAGTAAAGAACTGCACAATAATGAACACCACTAATGGTGTTAGGATTAAAACATGGTCAGCCTCTCCGGTTGCTGGTATTGCCATCATCATGCATTTTTCAGACATTACAATGATCAACGTTAGCAACCCAATTCTCATTGACCAAGAGTATTGTCCATGGAATCAGTGCAATCGTCAGGTATTAATCGTATTCTTAAAACTTTTATTTTGAAATTCTTCATGCATCTCAATTTCACGAATAGACTTTAATTTTTCAGATTCCGTCAAAGATTAAGATTAATAAAGTGAGCTTCAAGAATATTAGAGGATGTTCTGCAACTTCAGTGGCAGTCAAACTTATTTGTAGTAGCAACCTACCATGTGAAGAAGTAAAAGTAGCCAATATTGACCTCGTTTACAATGGAACAAAAGGTTCTATTACATCTCAATGCATGAATGTGAAACCAATCCTTTCGGGAATACAAAATCCTTCCATTTGCTCTTCCCCTTACACTATTGCTTCAAAATGATGACAACCTCAATTAGAATATAAGACAACCCTTTATCTTTTATTTTTCTACTGTTTTTTACTTTTCCAAATAAATTACAAAGATCAGGTTGGAATGTTTGAGGGAAGCTTGGTAA

mRNA sequence

ATGATCAAGTATTCGAGCTTATCGGTAACTACATTCTTGATGATATTGCTATCATTTACTATTGAGTCCCGATCTCATGTTGATGTTATTTTTCATTTGAGGAAGTATGGTAATATTGTGTCTGGCGTCGATGTCACTGAGGCTTTGAAAGATGCATGGAATGATGCATGTGCATCTGTTCCTCCAAGTGCTGTGATTATTCCAAAGGGAATATTTAAAGTAAGAGAAGGAGAATTTAAAGGTCCTTGCAAGAGCCCTATTGAAATGCGAGTTCGTGGAACATTGCAGGCTTTAAACCACCCTCAAGGAGATAGTTGGATTACTTTCGTATATGTTGATAGAATGAAACTATCAGGTGGAGTTTTTGATGGCCAAGGAAAGGAAGGGTGCAACAACCTCACATTTCAAGGTGTCAACATAATTGCACCAGAAGATAGTCCCAACACAGATGAAATACACATTGGCCGATCAATTAGGATCTCAATCTTGAAATCTCGAATAGCAATAGGAGATGATTGCATCTCACTTGGAAATGGAAGCAAACGAGTGAAAGTCACTGATGTGACATGTGGGCCAGGTCATGGAATAAGCATAGGAAGTCTTGGAAAATACACTAACGAAGAACCGGTTGAAGGTGTCGTAGTAAAGAACTGCACAATAATGAACACCACTAATGGTGTTAGGATTAAAACATGGTCAGCCTCTCCGGTTGCTGGTATTGCCATCATCATGCATTTTTCAGACATTACAATGATCAACGTTAGCAACCCAATTCTCATTGACCAAGAGTATTGTCCATGGAATCAGTGCAATCGTCAGATCAGGTTGGAATGTTTGAGGGAAGCTTGGTAA

Coding sequence (CDS)

ATGATCAAGTATTCGAGCTTATCGGTAACTACATTCTTGATGATATTGCTATCATTTACTATTGAGTCCCGATCTCATGTTGATGTTATTTTTCATTTGAGGAAGTATGGTAATATTGTGTCTGGCGTCGATGTCACTGAGGCTTTGAAAGATGCATGGAATGATGCATGTGCATCTGTTCCTCCAAGTGCTGTGATTATTCCAAAGGGAATATTTAAAGTAAGAGAAGGAGAATTTAAAGGTCCTTGCAAGAGCCCTATTGAAATGCGAGTTCGTGGAACATTGCAGGCTTTAAACCACCCTCAAGGAGATAGTTGGATTACTTTCGTATATGTTGATAGAATGAAACTATCAGGTGGAGTTTTTGATGGCCAAGGAAAGGAAGGGTGCAACAACCTCACATTTCAAGGTGTCAACATAATTGCACCAGAAGATAGTCCCAACACAGATGAAATACACATTGGCCGATCAATTAGGATCTCAATCTTGAAATCTCGAATAGCAATAGGAGATGATTGCATCTCACTTGGAAATGGAAGCAAACGAGTGAAAGTCACTGATGTGACATGTGGGCCAGGTCATGGAATAAGCATAGGAAGTCTTGGAAAATACACTAACGAAGAACCGGTTGAAGGTGTCGTAGTAAAGAACTGCACAATAATGAACACCACTAATGGTGTTAGGATTAAAACATGGTCAGCCTCTCCGGTTGCTGGTATTGCCATCATCATGCATTTTTCAGACATTACAATGATCAACGTTAGCAACCCAATTCTCATTGACCAAGAGTATTGTCCATGGAATCAGTGCAATCGTCAGATCAGGTTGGAATGTTTGAGGGAAGCTTGGTAA

Protein sequence

MIKYSSLSVTTFLMILLSFTIESRSHVDVIFHLRKYGNIVSGVDVTEALKDAWNDACASVPPSAVIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQALNHPQGDSWITFVYVDRMKLSGGVFDGQGKEGCNNLTFQGVNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGDDCISLGNGSKRVKVTDVTCGPGHGISIGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKTWSASPVAGIAIIMHFSDITMINVSNPILIDQEYCPWNQCNRQIRLECLREAW*

Homology

[Close]

BLAST of CsGy7G002550.2 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.4e-68
Identity = 136/327 (41.59%), Postives = 185/327 (56.57%), Query Frame = 0


Query: 2   IKYSSLSVTTFLMILLSFTIESRSHVDVIFHLRKYGNIVSGVDVTEALKDAWNDACASVP 61
           +K+S+  + +FL I      +S      +  + K+G   +  D+ +AL  AWN+ACAS  
Sbjct: 1   MKFSTAIIVSFLFIADFCAAQSG-----VLDISKFGGKPNS-DIGQALTSAWNEACASTT 60

Query: 62  PSAVIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQALNHPQ----GDSWITFVYVDRMKL 121
            + ++IP G +++   E KGPCK+PIE++V GT+QA   P      + W  F+Y+D + L
Sbjct: 61  AAKIVIPAGTYQLNGIELKGPCKAPIELQVDGTIQAPADPSVIKGTEQWFKFLYMDHLTL 120

Query: 122 SG-GVFDGQGKE------------------------------------------------ 181
           SG GVFDGQG                                                  
Sbjct: 121 SGKGVFDGQGATVYKKAAPASAWSGKNSNSKVFMNFGFNFVNNSIVRGVTSKDSKNFHVM 180

Query: 182 --GCNNLTFQGVNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGDDCISLGNGSKRVKVT 241
             GC N+TF G  I AP DSPNTD IH+G+S  + IL + I  GDDC+S+G+GSK++ V 
Sbjct: 181 VFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQ 240

Query: 242 DVTCGPGHGISIGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKTWSASPVAGIAIIMHF 274
            V CGPGHG+S+GSLGK+T EE VEG+ VKNCT+  T NGVRIKTW  +P       +HF
Sbjct: 241 GVNCGPGHGLSVGSLGKFTTEENVEGITVKNCTLTATDNGVRIKTWPDAPGTITVSDIHF 300

[Close]

BLAST of CsGy7G002550.2 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 5.3e-68
Identity = 133/315 (42.22%), Postives = 185/315 (58.73%), Query Frame = 0


Query: 9   VTTFLMILLSFTIESRSHVDVIFHLRKYGNIVSG-VDVTEALKDAWNDACASVPPSAVII 68
           V +  ++LL F   S+   D    + K+G    G  D+++   DAW +ACASV PS V+I
Sbjct: 8   VPSMFVLLLLFISASKVQPDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVI 67

Query: 69  PKGIFKVREGEFKGPCKSPIEMRVRGTLQALNHP---QGDSWITFVYVDRMKL-SGGVFD 128
           PKG + + +   +GPCK+PIE+ V+GT+QA   P   +  +W+ F  V+  K+  GG+FD
Sbjct: 68  PKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFD 127

Query: 129 GQGK----------------------------------------------EGCNNLTFQG 188
           GQG                                                 C N+T + 
Sbjct: 128 GQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLER 187

Query: 189 VNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGDDCISLGNGSKRVKVTDVTCGPGHGIS 248
           + I AP++SPNTD IH+G+S  ++I+ S I  GDDCIS+G+G+K + + ++TCGPGHGIS
Sbjct: 188 LKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGIS 247

Query: 249 IGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKTWSASPVAGIAIIMHFSDITMINVSNP 273
           IGSLGK+ NEEPVEG+ + NCTI NT+NG RIKTW       ++ I HF DITM NVS+P
Sbjct: 248 IGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEI-HFEDITMNNVSSP 307

[Close]

BLAST of CsGy7G002550.2 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 5.3e-68
Identity = 133/315 (42.22%), Postives = 185/315 (58.73%), Query Frame = 0


Query: 9   VTTFLMILLSFTIESRSHVDVIFHLRKYGNIVSG-VDVTEALKDAWNDACASVPPSAVII 68
           V +  ++LL F   S+   D    + K+G    G  D+++   DAW +ACASV PS V+I
Sbjct: 8   VPSMFVLLLLFISASKVQSDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVI 67

Query: 69  PKGIFKVREGEFKGPCKSPIEMRVRGTLQALNHP---QGDSWITFVYVDRMKL-SGGVFD 128
           PKG + + +   +GPCK+PIE+ V+GT+QA   P   +  +W+ F  V+  K+  GG+FD
Sbjct: 68  PKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFD 127

Query: 129 GQGK----------------------------------------------EGCNNLTFQG 188
           GQG                                                 C N+T + 
Sbjct: 128 GQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLER 187

Query: 189 VNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGDDCISLGNGSKRVKVTDVTCGPGHGIS 248
           + I AP++SPNTD IH+G+S  ++I+ S I  GDDCIS+G+G+K + + ++TCGPGHGIS
Sbjct: 188 LKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGIS 247

Query: 249 IGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKTWSASPVAGIAIIMHFSDITMINVSNP 273
           IGSLGK+ NEEPVEG+ + NCTI NT+NG RIKTW       ++ I HF DITM NVS+P
Sbjct: 248 IGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEI-HFEDITMNNVSSP 307

[Close]

BLAST of CsGy7G002550.2 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.8e-63
Identity = 130/282 (46.10%), Postives = 163/282 (57.80%), Query Frame = 0


Query: 44  DVTEALKDAWNDACASVPPSAVIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQALNHP-- 103
           D T+AL  AW +ACAS  PS +++PKG F V     +GPCKS I ++++GTL+A   P  
Sbjct: 1   DSTQALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSK 60

Query: 104 -QGDSWITFVYVDRMKL-SGGVFDGQGKE------------------------------- 163
            +G  WI    +D + +  GGVFDGQGK                                
Sbjct: 61  IKGLGWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSIL 120

Query: 164 ----------------GCNNLTFQGVNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGDD 223
                           GC NLTF+   I A E S NTD IHIGRS  ++I+ + I  GDD
Sbjct: 121 RDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDD 180

Query: 224 CISLGNGSKRVKVTDVTCGPGHGISIGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKTW 275
           CISLG+GSK + +T++TCGPGHGIS+GSLG+Y NEE V G+ VKNCTI  + NGVRIKTW
Sbjct: 181 CISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTW 240

[Close]

BLAST of CsGy7G002550.2 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 8.3e-61
Identity = 126/310 (40.65%), Postives = 179/310 (57.74%), Query Frame = 0


Query: 12  FLMILLSFTIESRSHVDVIFHLRKYGNIVSGVDVTEALKDAWNDACASVPPSAVIIPKGI 71
           F ++LL       S   V F + KYG   S  D++EAL +A+ +AC S  PS ++IPKG 
Sbjct: 9   FALVLLFLAHFGESQTGV-FDITKYG-ANSNADISEALLNAFKEACQSTSPSTIVIPKGT 68

Query: 72  FKVREGEFKGPCKSPIEMRVRGTLQALNHP---QGDSWITFVYVDRMKLS-GGVFDGQGK 131
           F + + + +GPCKSP+E++++ TL+A + P   +   W+T   +D+  +S GG+ DGQ  
Sbjct: 69  FTMNQVKLEGPCKSPLELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGILDGQAA 128

Query: 132 EG-------------------------------------------CNNLTFQGVNIIAPE 191
                                                        C NLTF   N+ AP 
Sbjct: 129 AAWECKQSKKCNKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPA 188

Query: 192 DSPNTDEIHIGRSIRISILKSRIAIGDDCISLGNGSKRVKVTDVTCGPGHGISIGSLGKY 251
           +SPNTD IH+ RS  ++I  S  + GDDCIS+G+ ++++ +T VTCGPGHGIS+GSLG  
Sbjct: 189 NSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGN 248

Query: 252 TNEEPVEGVVVKNCTIMNTTNGVRIKTWSASPVAGIAIIMHFSDITMINVSNPILIDQEY 275
            +E+PV GV V+NCT  NT NGVRIKTW AS   G+   +HF DI + NVSNP++IDQ Y
Sbjct: 249 PDEKPVVGVFVRNCTFTNTDNGVRIKTWPASH-PGVVNDVHFEDIIVQNVSNPVVIDQVY 308

[Close]

BLAST of CsGy7G002550.2 vs. NCBI nr
Match: KAA0059116.1 (exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 469 bits (1206), Expect = 4.07e-163
Identity = 243/320 (75.94%), Postives = 253/320 (79.06%), Query Frame = 0


Query: 2   IKYSSLSVTTFLMILLSFTIESRSHVDVIFHLRKYGNIVSGVDVTEALKDAWNDACASVP 61
           IKYSSL V TFLM LLSFT+ESRSHVDVIFHLRKYGNIVSG DVTEALKDAWNDACAS+ 
Sbjct: 4   IKYSSLLVITFLMALLSFTVESRSHVDVIFHLRKYGNIVSGADVTEALKDAWNDACASLR 63

Query: 62  PSAVIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQALNHPQGDSWITFVYVDRMKLSGG- 121
           PSAV+IPKG FKVREGEFKGPCKSPIE+RVRGTLQA  HP GDSWITF YVDRM LSGG 
Sbjct: 64  PSAVVIPKGTFKVREGEFKGPCKSPIEVRVRGTLQAPKHPHGDSWITFAYVDRMTLSGGG 123

Query: 122 VFDGQGKEG----------------------------------------------CNNLT 181
           VFDGQGK G                                              CNNLT
Sbjct: 124 VFDGQGKAGWEKNDCHKRIGCARLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLT 183

Query: 182 FQGVNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGDDCISLGNGSKRVKVTDVTCGPGH 241
           F GVNIIAPEDSPNTD IHIGRSI ISILKSRIA GDDCISLG+GSKRVK+T+VTCGPGH
Sbjct: 184 FDGVNIIAPEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRVKITNVTCGPGH 243

Query: 242 GISIGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKTWSASPVAGIAIIMHFSDITMINV 274
           GISIGSLGKYTNEEPVEGV+VKNCTIMNTTNGVRIKTW ASPVAGIA  MHF DITM+NV
Sbjct: 244 GISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWPASPVAGIATNMHFLDITMVNV 303

[Close]

BLAST of CsGy7G002550.2 vs. NCBI nr
Match: XP_008455553.1 (PREDICTED: exopolygalacturonase-like [Cucumis melo] >TYK21621.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 468 bits (1205), Expect = 5.78e-163
Identity = 242/320 (75.62%), Postives = 253/320 (79.06%), Query Frame = 0


Query: 2   IKYSSLSVTTFLMILLSFTIESRSHVDVIFHLRKYGNIVSGVDVTEALKDAWNDACASVP 61
           IKYSSL V TFLM LLSFT+ESRSHVDVIFHLRKYGNIVSG DVTEALKDAWNDACAS+ 
Sbjct: 4   IKYSSLLVITFLMALLSFTVESRSHVDVIFHLRKYGNIVSGADVTEALKDAWNDACASLR 63

Query: 62  PSAVIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQALNHPQGDSWITFVYVDRMKLSGG- 121
           PSAV+IPKG FKVREGEFKGPCKSP+E+RVRGTLQA  HP GDSWITF YVDRM LSGG 
Sbjct: 64  PSAVVIPKGTFKVREGEFKGPCKSPVEVRVRGTLQAPKHPHGDSWITFAYVDRMTLSGGG 123

Query: 122 VFDGQGKEG----------------------------------------------CNNLT 181
           VFDGQGK G                                              CNNLT
Sbjct: 124 VFDGQGKAGWEKNDCHKHISCARLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLT 183

Query: 182 FQGVNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGDDCISLGNGSKRVKVTDVTCGPGH 241
           F GVNIIAPEDSPNTD IHIGRSI ISILKSRIA GDDCISLG+GSKRVK+T+VTCGPGH
Sbjct: 184 FDGVNIIAPEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRVKITNVTCGPGH 243

Query: 242 GISIGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKTWSASPVAGIAIIMHFSDITMINV 274
           GISIGSLGKYTNEEPVEGV+VKNCTIMNTTNGVRIKTW ASPVAGIA  MHF DITM+NV
Sbjct: 244 GISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWPASPVAGIATNMHFLDITMVNV 303

[Close]

BLAST of CsGy7G002550.2 vs. NCBI nr
Match: XP_031745268.1 (exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 467 bits (1201), Expect = 2.51e-162
Identity = 243/321 (75.70%), Postives = 256/321 (79.75%), Query Frame = 0


Query: 1   MIKYSSLSVTTFLMILLSFTIESRSHVDVIFHLRKYGNIVSGVDVTEALKDAWNDACASV 60
           MIKYS+LS+TTFLM LLSFTIES+SHVDVIF LRKYGNIVSG DVTEALKDAWNDACASV
Sbjct: 3   MIKYSNLSITTFLMSLLSFTIESQSHVDVIFPLRKYGNIVSGDDVTEALKDAWNDACASV 62

Query: 61  PPSAVIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQALNHPQGDSWITFVYVDRMKLSG- 120
            PSAV+IP GIFKVREGEFKGPCKSPIE+RVRGTLQA  HP GDSWITF YVDRM +SG 
Sbjct: 63  RPSAVVIPDGIFKVREGEFKGPCKSPIEIRVRGTLQAPKHPHGDSWITFAYVDRMTISGK 122

Query: 121 GVFDGQGKEG----------------------------------------------CNNL 180
           GVFDGQGK G                                              CNNL
Sbjct: 123 GVFDGQGKAGWEKNDCHKRIDCANLPISLRFDFITNSIVRGITSLDSKNFHVNILGCNNL 182

Query: 181 TFQGVNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGDDCISLGNGSKRVKVTDVTCGPG 240
           TFQGVNIIAPEDSPNTD IHIGRSI ISILKSRIA GDDCISLG+GSKRVK+T+VTCGPG
Sbjct: 183 TFQGVNIIAPEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRVKITNVTCGPG 242

Query: 241 HGISIGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKTWSASPVAGIAIIMHFSDITMIN 274
           HGISIGSLGKYTNEEPV+ VVVKNCTIMNTTNGVRIKTW +SPVAGIA  MHFSDITM+N
Sbjct: 243 HGISIGSLGKYTNEEPVDDVVVKNCTIMNTTNGVRIKTWPSSPVAGIATNMHFSDITMVN 302

[Close]

BLAST of CsGy7G002550.2 vs. NCBI nr
Match: XP_031742281.1 (exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 466 bits (1198), Expect = 7.18e-162
Identity = 243/320 (75.94%), Postives = 254/320 (79.38%), Query Frame = 0


Query: 2   IKYSSLSVTTFLMILLSFTIESRSHVDVIFHLRKYGNIVSGVDVTEALKDAWNDACASVP 61
           IKYS+L VTTFLM LLSF IESRSHVDVIF LRKYGNIVSG DVTEALKDAWNDACASV 
Sbjct: 4   IKYSNLLVTTFLMSLLSFIIESRSHVDVIFPLRKYGNIVSGADVTEALKDAWNDACASVR 63

Query: 62  PSAVIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQALNHPQGDSWITFVYVDRMKLSGG- 121
           PSAV+IPKGIFKVREGEFKGPCKSPIE+RVRGTLQA  HP GDSWITF YVDRM LSGG 
Sbjct: 64  PSAVVIPKGIFKVREGEFKGPCKSPIEIRVRGTLQAPKHPHGDSWITFAYVDRMTLSGGG 123

Query: 122 VFDGQGKEG----------------------------------------------CNNLT 181
           VFDGQGK G                                              CNNLT
Sbjct: 124 VFDGQGKAGWEKNDCHKRIDCANLPISLRFDFITNSIVKRITSLDSKNFHVNILGCNNLT 183

Query: 182 FQGVNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGDDCISLGNGSKRVKVTDVTCGPGH 241
           F+GVNIIAPEDSPNTD IHIGRSI ISILKS+IA GDDCISLG+GSKRVK+T+VTCGPGH
Sbjct: 184 FKGVNIIAPEDSPNTDGIHIGRSIGISILKSQIATGDDCISLGDGSKRVKITNVTCGPGH 243

Query: 242 GISIGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKTWSASPVAGIAIIMHFSDITMINV 274
           GISIGSLGKYTNEEPVEGV+VKNCTIMNTTNGVRIKTW ASP AGIA  MHFSDITM+NV
Sbjct: 244 GISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWPASPNAGIATDMHFSDITMVNV 303

[Close]

BLAST of CsGy7G002550.2 vs. NCBI nr
Match: XP_031741749.1 (exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 460 bits (1183), Expect = 1.32e-159
Identity = 239/320 (74.69%), Postives = 252/320 (78.75%), Query Frame = 0


Query: 2   IKYSSLSVTTFLMILLSFTIESRSHVDVIFHLRKYGNIVSGVDVTEALKDAWNDACASVP 61
           IKYS+L VTTFLM LLSFTIESRSH+DVIF L KYGNIVSG DVTEALK+AWNDACASV 
Sbjct: 4   IKYSNLLVTTFLMSLLSFTIESRSHIDVIFPLEKYGNIVSGADVTEALKNAWNDACASVH 63

Query: 62  PSAVIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQALNHPQGDSWITFVYVDRMKLSGG- 121
           PSAV+IPKGIFKVREG+FKGPCKSPIE+RVRGTLQA  HP GDSWITF YVDRM LSGG 
Sbjct: 64  PSAVVIPKGIFKVREGKFKGPCKSPIEIRVRGTLQAPKHPYGDSWITFAYVDRMTLSGGG 123

Query: 122 VFDGQGKEG----------------------------------------------CNNLT 181
           VFDGQGK G                                              CNNLT
Sbjct: 124 VFDGQGKTGWEKNDCHKRIDCANLPISLRFDFITNSIVRRITSLNSKNFHVNILGCNNLT 183

Query: 182 FQGVNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGDDCISLGNGSKRVKVTDVTCGPGH 241
           FQGVNIIAPEDSPNTD IHIGRSI ISILKSRIA GDDCISLG+GSK+VKV +VTCGPGH
Sbjct: 184 FQGVNIIAPEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKQVKVANVTCGPGH 243

Query: 242 GISIGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKTWSASPVAGIAIIMHFSDITMINV 274
           GISIGSLGKYTNEEPVEGV+VKNCTI+NTTNGVRIKTW  SP AGIA  MHFSDITM+NV
Sbjct: 244 GISIGSLGKYTNEEPVEGVIVKNCTIINTTNGVRIKTWPTSPAAGIATNMHFSDITMVNV 303

[Close]

BLAST of CsGy7G002550.2 vs. ExPASy TrEMBL
Match: A0A5A7UY44 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G00230 PE=3 SV=1)

HSP 1 Score: 469 bits (1206), Expect = 1.97e-163
Identity = 243/320 (75.94%), Postives = 253/320 (79.06%), Query Frame = 0


Query: 2   IKYSSLSVTTFLMILLSFTIESRSHVDVIFHLRKYGNIVSGVDVTEALKDAWNDACASVP 61
           IKYSSL V TFLM LLSFT+ESRSHVDVIFHLRKYGNIVSG DVTEALKDAWNDACAS+ 
Sbjct: 4   IKYSSLLVITFLMALLSFTVESRSHVDVIFHLRKYGNIVSGADVTEALKDAWNDACASLR 63

Query: 62  PSAVIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQALNHPQGDSWITFVYVDRMKLSGG- 121
           PSAV+IPKG FKVREGEFKGPCKSPIE+RVRGTLQA  HP GDSWITF YVDRM LSGG 
Sbjct: 64  PSAVVIPKGTFKVREGEFKGPCKSPIEVRVRGTLQAPKHPHGDSWITFAYVDRMTLSGGG 123

Query: 122 VFDGQGKEG----------------------------------------------CNNLT 181
           VFDGQGK G                                              CNNLT
Sbjct: 124 VFDGQGKAGWEKNDCHKRIGCARLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLT 183

Query: 182 FQGVNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGDDCISLGNGSKRVKVTDVTCGPGH 241
           F GVNIIAPEDSPNTD IHIGRSI ISILKSRIA GDDCISLG+GSKRVK+T+VTCGPGH
Sbjct: 184 FDGVNIIAPEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRVKITNVTCGPGH 243

Query: 242 GISIGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKTWSASPVAGIAIIMHFSDITMINV 274
           GISIGSLGKYTNEEPVEGV+VKNCTIMNTTNGVRIKTW ASPVAGIA  MHF DITM+NV
Sbjct: 244 GISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWPASPVAGIATNMHFLDITMVNV 303

[Close]

BLAST of CsGy7G002550.2 vs. ExPASy TrEMBL
Match: A0A5D3DD75 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00190 PE=3 SV=1)

HSP 1 Score: 468 bits (1205), Expect = 2.80e-163
Identity = 242/320 (75.62%), Postives = 253/320 (79.06%), Query Frame = 0


Query: 2   IKYSSLSVTTFLMILLSFTIESRSHVDVIFHLRKYGNIVSGVDVTEALKDAWNDACASVP 61
           IKYSSL V TFLM LLSFT+ESRSHVDVIFHLRKYGNIVSG DVTEALKDAWNDACAS+ 
Sbjct: 4   IKYSSLLVITFLMALLSFTVESRSHVDVIFHLRKYGNIVSGADVTEALKDAWNDACASLR 63

Query: 62  PSAVIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQALNHPQGDSWITFVYVDRMKLSGG- 121
           PSAV+IPKG FKVREGEFKGPCKSP+E+RVRGTLQA  HP GDSWITF YVDRM LSGG 
Sbjct: 64  PSAVVIPKGTFKVREGEFKGPCKSPVEVRVRGTLQAPKHPHGDSWITFAYVDRMTLSGGG 123

Query: 122 VFDGQGKEG----------------------------------------------CNNLT 181
           VFDGQGK G                                              CNNLT
Sbjct: 124 VFDGQGKAGWEKNDCHKHISCARLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLT 183

Query: 182 FQGVNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGDDCISLGNGSKRVKVTDVTCGPGH 241
           F GVNIIAPEDSPNTD IHIGRSI ISILKSRIA GDDCISLG+GSKRVK+T+VTCGPGH
Sbjct: 184 FDGVNIIAPEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRVKITNVTCGPGH 243

Query: 242 GISIGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKTWSASPVAGIAIIMHFSDITMINV 274
           GISIGSLGKYTNEEPVEGV+VKNCTIMNTTNGVRIKTW ASPVAGIA  MHF DITM+NV
Sbjct: 244 GISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWPASPVAGIATNMHFLDITMVNV 303

[Close]

BLAST of CsGy7G002550.2 vs. ExPASy TrEMBL
Match: A0A1S3C2F4 (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103495704 PE=3 SV=1)

HSP 1 Score: 468 bits (1205), Expect = 2.80e-163
Identity = 242/320 (75.62%), Postives = 253/320 (79.06%), Query Frame = 0


Query: 2   IKYSSLSVTTFLMILLSFTIESRSHVDVIFHLRKYGNIVSGVDVTEALKDAWNDACASVP 61
           IKYSSL V TFLM LLSFT+ESRSHVDVIFHLRKYGNIVSG DVTEALKDAWNDACAS+ 
Sbjct: 4   IKYSSLLVITFLMALLSFTVESRSHVDVIFHLRKYGNIVSGADVTEALKDAWNDACASLR 63

Query: 62  PSAVIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQALNHPQGDSWITFVYVDRMKLSGG- 121
           PSAV+IPKG FKVREGEFKGPCKSP+E+RVRGTLQA  HP GDSWITF YVDRM LSGG 
Sbjct: 64  PSAVVIPKGTFKVREGEFKGPCKSPVEVRVRGTLQAPKHPHGDSWITFAYVDRMTLSGGG 123

Query: 122 VFDGQGKEG----------------------------------------------CNNLT 181
           VFDGQGK G                                              CNNLT
Sbjct: 124 VFDGQGKAGWEKNDCHKHISCARLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLT 183

Query: 182 FQGVNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGDDCISLGNGSKRVKVTDVTCGPGH 241
           F GVNIIAPEDSPNTD IHIGRSI ISILKSRIA GDDCISLG+GSKRVK+T+VTCGPGH
Sbjct: 184 FDGVNIIAPEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRVKITNVTCGPGH 243

Query: 242 GISIGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKTWSASPVAGIAIIMHFSDITMINV 274
           GISIGSLGKYTNEEPVEGV+VKNCTIMNTTNGVRIKTW ASPVAGIA  MHF DITM+NV
Sbjct: 244 GISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWPASPVAGIATNMHFLDITMVNV 303

[Close]

BLAST of CsGy7G002550.2 vs. ExPASy TrEMBL
Match: A0A0A0K3B7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037910 PE=3 SV=1)

HSP 1 Score: 444 bits (1143), Expect = 7.71e-154
Identity = 234/320 (73.12%), Postives = 246/320 (76.88%), Query Frame = 0


Query: 2   IKYSSLSVTTFLMILLSFTIESRSHVDVIFHLRKYGNIVSGVDVTEALKDAWNDACASVP 61
           IK+  L VTTFLM LLSFTIE+RSHVD IF LRKYGNIVSG DVTEALKDAWNDACAS  
Sbjct: 4   IKHLILLVTTFLMSLLSFTIEARSHVD-IFSLRKYGNIVSGADVTEALKDAWNDACASDR 63

Query: 62  PSAVIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQALNHPQGDSWITFVYVDRMKLSGG- 121
           PSAV+IPKG FKVREGEFKGPCKSPIE RV GTLQA  HP GDSWITF YVDRM+LSGG 
Sbjct: 64  PSAVVIPKGTFKVREGEFKGPCKSPIEFRVHGTLQAPKHPHGDSWITFAYVDRMRLSGGG 123

Query: 122 VFDGQGKEG----------------------------------------------CNNLT 181
           VFDGQGK G                                              CNNLT
Sbjct: 124 VFDGQGKAGWEKNDCHKRIDCAKLPISLRFDFITNSIVRRITSLDSKNFHVNILGCNNLT 183

Query: 182 FQGVNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGDDCISLGNGSKRVKVTDVTCGPGH 241
           FQGVNIIAPE+SPNTD IHIGRSI ISILKSRIA GDDCISLG+GSKR+KV +V CGPGH
Sbjct: 184 FQGVNIIAPENSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRIKVNNVICGPGH 243

Query: 242 GISIGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKTWSASPVAGIAIIMHFSDITMINV 274
           GISIGSLGKY NEEPVEGV+V NCTI+NTTNGVRIKTW ASPVAGIA  MHFSDITM+NV
Sbjct: 244 GISIGSLGKYNNEEPVEGVIVNNCTIINTTNGVRIKTWPASPVAGIATNMHFSDITMVNV 303

[Close]

BLAST of CsGy7G002550.2 vs. ExPASy TrEMBL
Match: A0A6J1C2C8 (exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111007743 PE=3 SV=1)

HSP 1 Score: 400 bits (1027), Expect = 3.00e-136
Identity = 205/317 (64.67%), Postives = 232/317 (73.19%), Query Frame = 0


Query: 5   SSLSVTTFLMILLSFTIESRSHVDVIFHLRKYGNIVSGVDVTEALKDAWNDACASVPPSA 64
           SS  V  FLM+LL FT ++RS VDV++HLRKYG +VSG DV++AL +AW DACASV PSA
Sbjct: 6   SSFLVAAFLMLLLEFTPKARSRVDVVYHLRKYGAVVSGADVSQALANAWKDACASVRPSA 65

Query: 65  VIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQALNHPQGDSWITFVYVDRMKL-SGGVFD 124
           V+IP+GIFKV +G F+GPCKS IE R+RGTLQA  HP+G+SWITF Y+DR+ L  GGVFD
Sbjct: 66  VVIPRGIFKVSKGNFRGPCKSRIEFRLRGTLQAPTHPKGESWITFAYIDRLTLLGGGVFD 125

Query: 125 GQGKEG----------------------------------------------CNNLTFQG 184
           GQGK G                                              CNNLTF G
Sbjct: 126 GQGKAGWEKNDCHKSINCAKLPISLRFDFITNSTVKRITSLDSKHFHVNILGCNNLTFHG 185

Query: 185 VNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGDDCISLGNGSKRVKVTDVTCGPGHGIS 244
           VNIIAPEDSPNTD IHIGRS  I+I KSRIA GDDCISLG+GSKR+KVT+VTCGPGHGIS
Sbjct: 186 VNIIAPEDSPNTDGIHIGRSKGITITKSRIATGDDCISLGDGSKRIKVTNVTCGPGHGIS 245

Query: 245 IGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKTWSASPVAGIAIIMHFSDITMINVSNP 274
           IGSLG+YT EEPV+GV+VKNCTIMNTTNGVRIKTW AS   G A  MHF DI M+NVS+P
Sbjct: 246 IGSLGRYTKEEPVKGVIVKNCTIMNTTNGVRIKTWPASADTGTATNMHFVDIIMVNVSHP 305

[Close]

BLAST of CsGy7G002550.2 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 254.6 bits (649), Expect = 9.4e-68
Identity = 131/282 (46.45%), Postives = 171/282 (60.64%), Query Frame = 0


Query: 41  SGVDVTEALKDAWNDACASVPPSAVIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQA-LN 100
           SG D+T+AL  A+  AC S  PS V+IPKG FK+ E E +GPCK+PIE+ ++GT++A  N
Sbjct: 31  SGSDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGN 90

Query: 101 HPQG-DSWITFVYVDRMKLS-GGVFDGQGKE----------------------------- 160
             QG + W+ F  +D  KL+ GG FDG+G                               
Sbjct: 91  AIQGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSE 150

Query: 161 -----------------GCNNLTFQGVNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGD 220
                            G  N+T   + I+APEDSPNTD IH+GRS  + IL S I+ GD
Sbjct: 151 IRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGD 210

Query: 221 DCISLGNGSKRVKVTDVTCGPGHGISIGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKT 274
           DCIS+G+G K + V  VTCGPGHGIS+GSLG+Y +E+ V G+ V NCT+  T NG+RIKT
Sbjct: 211 DCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKT 270

[Close]

BLAST of CsGy7G002550.2 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 245.4 bits (625), Expect = 5.7e-65
Identity = 134/322 (41.61%), Postives = 185/322 (57.45%), Query Frame = 0


Query: 1   MIKYSSLSVTTFLMILLSFTIESRSHVDVIFHLRKYGNIVSGVDVTEALKDAWNDACASV 60
           M  Y  +S   F++ LL F+  +      +F++        G D+T+AL  A+  AC + 
Sbjct: 1   MGSYLGISAVLFVISLLGFSANAE-----VFNV----GGSPGSDITQALLKAFTSACQAP 60

Query: 61  PPSAVIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQALNHP-QG-DSWITFVYVDRMKLS 120
             S V+I KG FK+ E E  GPCK+P+E+ ++GTL+A     QG + W+ F+ ++  KL+
Sbjct: 61  TASKVVITKGEFKLGEIEMTGPCKAPVEINLQGTLKADGKAIQGKERWVVFLRINGFKLN 120

Query: 121 -GGVFDGQGKE----------------------------------------------GCN 180
            GG+FDG+G                                                G  
Sbjct: 121 GGGIFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVENAEIRDISSIDAKNFHINVLGAK 180

Query: 181 NLTFQGVNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGDDCISLGNGSKRVKVTDVTCG 240
           N+TF  V +IAP +SPNTD IH+GRS  + IL S+IA GDDCIS+G+G K + V +V CG
Sbjct: 181 NMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIATGDDCISVGDGMKNLHVENVMCG 240

Query: 241 PGHGISIGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKTWSASPVAGIAIIMHFSDITM 274
           PGHGIS+GSLG+Y +E+ V G+ V NCT+  T NG+RIKTW ++  A  A  +HF +I +
Sbjct: 241 PGHGISVGSLGRYVHEQDVTGITVVNCTLQGTDNGLRIKTWPSAACATTASGIHFENIIL 300

[Close]

BLAST of CsGy7G002550.2 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 243.4 bits (620), Expect = 2.2e-64
Identity = 126/284 (44.37%), Postives = 167/284 (58.80%), Query Frame = 0


Query: 38  NIVSGVDVTEALKDAWNDACASVPPSAVIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQA 97
           N   G D+T AL  A+N+AC     S V+IPKG +K+ E    GPCK+PI + + GT++A
Sbjct: 29  NSPPGSDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKA 88

Query: 98  LNHPQG-DSWITFVYVDRMKLS-GGVFDGQGKE--------------------------- 157
             +  G + W+ F  ++  KL+ GGVFDG+G                             
Sbjct: 89  DGNANGKEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTD 148

Query: 158 -------------------GCNNLTFQGVNIIAPEDSPNTDEIHIGRSIRISILKSRIAI 217
                              G  N+TF+ V IIAP +SPNTD IH+GRS  I I+ S I+ 
Sbjct: 149 AKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFIST 208

Query: 218 GDDCISLGNGSKRVKVTDVTCGPGHGISIGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRI 274
           GDDC+S+G+G K + V  VTCGPGHGISIGSLG+Y++EE V G+ + NCT+  T NG+RI
Sbjct: 209 GDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRI 268

[Close]

BLAST of CsGy7G002550.2 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 241.5 bits (615), Expect = 8.2e-64
Identity = 124/281 (44.13%), Postives = 166/281 (59.07%), Query Frame = 0


Query: 42  GVDVTEALKDAWNDACASVPPSAVIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQA-LNH 101
           G D+T+AL  A+  AC S  P  V+IPKG FK+ E    GPCKSP+E+ + GT+ A  N 
Sbjct: 33  GSDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLLGTVLADGNS 92

Query: 102 PQG-DSWITFVYVDRMKLS-GGVFDGQGKE------------------------------ 161
             G + W+ F  +D  +L+ GG FDG+G                                
Sbjct: 93  IHGKEKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAEI 152

Query: 162 ----------------GCNNLTFQGVNIIAPEDSPNTDEIHIGRSIRISILKSRIAIGDD 221
                           G  N+TF  V I+AP +SPNTD IH+GRS+ +SI+ SRI+ GDD
Sbjct: 153 RDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDD 212

Query: 222 CISLGNGSKRVKVTDVTCGPGHGISIGSLGKYTNEEPVEGVVVKNCTIMNTTNGVRIKTW 274
           C+S+G+G   + V +V CGPGHGIS+GSLG+Y +E+ V G+ V NCT+  T NG+RIKTW
Sbjct: 213 CVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTW 272

[Close]

BLAST of CsGy7G002550.2 vs. TAIR 10
Match: AT3G07850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 211.5 bits (537), Expect = 9.1e-55
Identity = 118/283 (41.70%), Postives = 154/283 (54.42%), Query Frame = 0


Query: 41  SGVDVTEALKDAWNDACASVPPSAVIIPKGIFKVREGEFKGPCKSPIEMRVRGTLQA--- 100
           S  D + A   AW +ACA+   S + +PKG + V   EFKGPCK P+ + + G  +A   
Sbjct: 81  SKTDDSAAFAAAWKEACAA--GSTITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPAT 140

Query: 101 --LNHPQGDSWITFVYVDRMKLSG--GVFDGQG----------KEG-------------- 160
                P    WI F  +    L+G   +FDGQG          K G              
Sbjct: 141 VKTTKPHA-GWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGL 200

Query: 161 ----------------------CNNLTFQGVNIIAPEDSPNTDEIHIGRSIRISILKSRI 220
                                 C N+T   + I AP +S NTD IHIGRS  ++++ ++I
Sbjct: 201 TNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKI 260

Query: 221 AIGDDCISLGNGSKRVKVTDVTCGPGHGISIGSLGKYTNEEPVEGVVVKNCTIMNTTNGV 271
             GDDC+S+G+G++ + V +V CGPGHGISIGSLG+Y NE+PV+GV V+ C I NT NGV
Sbjct: 261 KTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGV 320

The following BLAST results are available for this feature:

BLAST of CsGy7G002550.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40312	2.4e-68	41.59	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
Q39766	5.3e-68	42.22	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
Q39786	5.3e-68	42.22	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
P24548	1.8e-63	46.10	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
Q05967	8.3e-61	40.65	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]

BLAST of CsGy7G002550.2 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059116.1	4.07e-163	75.94	exopolygalacturonase-like [Cucumis melo var. makuwa]	[more]
XP_008455553.1	5.78e-163	75.63	PREDICTED: exopolygalacturonase-like [Cucumis melo] >TYK21621.1 exopolygalacturo...	[more]
XP_031745268.1	2.51e-162	75.70	exopolygalacturonase-like [Cucumis sativus]	[more]
XP_031742281.1	7.18e-162	75.94	exopolygalacturonase-like [Cucumis sativus]	[more]
XP_031741749.1	1.32e-159	74.69	exopolygalacturonase-like [Cucumis sativus]	[more]

BLAST of CsGy7G002550.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UY44	1.97e-163	75.94	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3DD75	2.80e-163	75.63	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3C2F4	2.80e-163	75.63	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103495704 PE=3 SV=1	[more]
A0A0A0K3B7	7.71e-154	73.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037910 PE=3 SV=1	[more]
A0A6J1C2C8	3.00e-136	64.67	exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111007743 PE=3 SV...	[more]

BLAST of CsGy7G002550.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07820.1	9.4e-68	46.45	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	5.7e-65	41.61	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	2.2e-64	44.37	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	8.2e-64	44.13	Pectin lyase-like superfamily protein	[more]
AT3G07850.1	9.1e-55	41.70	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 210..231 e-value: 0.25 score: 20.4 coord: 180..200 e-value: 3600.0 score: 3.3 coord: 130..178 e-value: 6400.0 score: 1.4
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 129..277 e-value: 1.5E-49 score: 170.7
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 19..128 e-value: 3.1E-10 score: 41.5
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 57..127 e-value: 9.7E-8 score: 31.4 coord: 129..273 e-value: 3.4E-51 score: 174.2
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 187..200
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 18..127
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 129..273
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 18..127 coord: 129..273
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 17..273

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy7G002550	CsGy7G002550	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy7G002550.2.exon1	CsGy7G002550.2.exon1	exon
CsGy7G002550.2.exon2	CsGy7G002550.2.exon2	exon
CsGy7G002550.2.exon3	CsGy7G002550.2.exon3	exon
CsGy7G002550.2.exon4	CsGy7G002550.2.exon4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy7G002550.2	cds.CsGy7G002550.2	CDS
cds.CsGy7G002550.2	cds.CsGy7G002550.2_2	CDS
cds.CsGy7G002550.2	cds.CsGy7G002550.2_3	CDS
cds.CsGy7G002550.2	cds.CsGy7G002550.2_4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy7G002550.2	CsGy7G002550.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity