CsGy6G016547.1 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G016547.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Glutamate receptor
Location	Gy14Chr6: 15593993 .. 15594262 (-)
Sequence length	270
RNA-Seq Expression	CsGy6G016547.1
Synteny	CsGy6G016547.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATGAACCATTCATCAAACTATCTCTACAACCTCGACATCAATGAAAACGGTCCCAAGTTGCGAGACGCATTGTCAAATGTTAGGTTTAGAGGGTTAGCTAGTGAGTTTGGTCTCGTCAATGGCCAATTACAATCATTCGTTTTCGAGATAGTGAACGTGGTCGGTAACGAAAGAAGGAGTGTGGGGTTTTGGACGCCGAAAGCTGGGCTGACAACAAGTCTACGACACTCGGGGAGAAAAAGGGAATTGAGACCGATCATATAG

mRNA sequence

ATGAAAATGAACCATTCATCAAACTATCTCTACAACCTCGACATCAATGAAAACGGTCCCAAGTTGCGAGACGCATTGTCAAATGTTAGGTTTAGAGGGTTAGCTAGTGAGTTTGGTCTCGTCAATGGCCAATTACAATCATTCGTTTTCGAGATAGTGAACGTGGTCGGTAACGAAAGAAGGAGTGTGGGGTTTTGGACGCCGAAAGCTGGGCTGACAACAAGTCTACGACACTCGGGGAGAAAAAGGGAATTGAGACCGATCATATAG

Coding sequence (CDS)

ATGAAAATGAACCATTCATCAAACTATCTCTACAACCTCGACATCAATGAAAACGGTCCCAAGTTGCGAGACGCATTGTCAAATGTTAGGTTTAGAGGGTTAGCTAGTGAGTTTGGTCTCGTCAATGGCCAATTACAATCATTCGTTTTCGAGATAGTGAACGTGGTCGGTAACGAAAGAAGGAGTGTGGGGTTTTGGACGCCGAAAGCTGGGCTGACAACAAGTCTACGACACTCGGGGAGAAAAAGGGAATTGAGACCGATCATATAG

Protein sequence

MKMNHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPKAGLTTSLRHSGRKRELRPII*

Homology

[Close]

BLAST of CsGy6G016547.1 vs. ExPASy Swiss-Prot
Match: O81078 (Glutamate receptor 2.9 OS=Arabidopsis thaliana OX=3702 GN=GLR2.9 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 7.5e-16
Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 0


Query: 10  LYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 69
           L N+ ++  GP L+ A S VRF GLA EF L++GQLQS  FEI+N VGNE R +GFWTP+
Sbjct: 349 LGNVGVSLYGPSLQKAFSEVRFNGLAGEFKLIDGQLQSPKFEIINFVGNEERIIGFWTPR 408

Query: 70  AGLTTSLRHSGRKRELRPII 90
            GL  +   S  K+ L P+I
Sbjct: 409 DGLMDAT--SSNKKTLGPVI 426

[Close]

BLAST of CsGy6G016547.1 vs. ExPASy Swiss-Prot
Match: Q8LGN0 (Glutamate receptor 2.7 OS=Arabidopsis thaliana OX=3702 GN=GLR2.7 PE=2 SV=3)

HSP 1 Score: 77.4 bits (189), Expect = 9.1e-14
Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 0


Query: 4   NHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSV 63
           N+ +N L  L ++  GP L  ALSNVRF GLA EF L+NGQL+S VF+++N++G+E R +
Sbjct: 354 NNKTN-LGTLGVSRYGPSLLKALSNVRFNGLAGEFELINGQLESSVFDVINIIGSEERII 413

Query: 64  GFWTPKAGLTTS 76
           G W P  G+  +
Sbjct: 414 GLWRPSNGIVNA 424

[Close]

BLAST of CsGy6G016547.1 vs. ExPASy Swiss-Prot
Match: Q9LFN5 (Glutamate receptor 2.5 OS=Arabidopsis thaliana OX=3702 GN=GLR2.5 PE=2 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 5.9e-13
Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 10  LYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 69
           L  L +  +GPKL DALS V F+G+A  F L NG+L++  F+I+N+  +  R+VGFW  K
Sbjct: 355 LDELGVALSGPKLLDALSTVSFKGVAGRFQLKNGKLEATTFKIINIEESGERTVGFWKSK 414

Query: 70  AGLTTSLR-----HSGRKRELRPII 90
            GL  SLR     HS R+  LRPII
Sbjct: 415 VGLVKSLRVDKVSHSSRR--LRPII 437

[Close]

BLAST of CsGy6G016547.1 vs. ExPASy Swiss-Prot
Match: Q9C5V5 (Glutamate receptor 2.8 OS=Arabidopsis thaliana OX=3702 GN=GLR2.8 PE=2 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 7.7e-13
Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 10  LYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 69
           L  L ++  GP L +ALS +RF GLA  F L++ QL+S  FEI+N VGNE R VGFWTP 
Sbjct: 352 LGTLHVSRYGPSLLEALSEIRFNGLAGRFNLIDRQLESPKFEIINFVGNEERIVGFWTPS 411

Query: 70  AGL 73
            GL
Sbjct: 412 NGL 414

[Close]

BLAST of CsGy6G016547.1 vs. ExPASy Swiss-Prot
Match: Q9SHV1 (Glutamate receptor 2.2 OS=Arabidopsis thaliana OX=3702 GN=GLR2.2 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.9e-12
Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 10  LYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 69
           L  L +++ GPKL   +S V+F+GLA +F  V+GQLQ  VFEIVN++G   RS+GFWT  
Sbjct: 346 LDGLGLSQFGPKLLQTVSTVQFKGLAGDFHFVSGQLQPSVFEIVNMIGTGERSIGFWTEG 405

Query: 70  AGLTTSLRHSGR 82
            GL   L    R
Sbjct: 406 NGLVKKLDQEPR 417

[Close]

BLAST of CsGy6G016547.1 vs. NCBI nr
Match: KAE8647081.1 (hypothetical protein Csa_022998 [Cucumis sativus])

HSP 1 Score: 180 bits (457), Expect = 4.08e-57
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MKMNHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNER 60
          MKMNHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNER
Sbjct: 1  MKMNHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNER 60

Query: 61 RSVGFWTPKAGLTTSLRHSGRKRELRPII 89
          RSVGFWTPKAGLTTSLRHSGRKRELRPII
Sbjct: 61 RSVGFWTPKAGLTTSLRHSGRKRELRPII 89

[Close]

BLAST of CsGy6G016547.1 vs. NCBI nr
Match: XP_031737065.1 (glutamate receptor 2.5 [Cucumis sativus])

HSP 1 Score: 165 bits (418), Expect = 4.15e-45
Identity = 82/89 (92.13%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1   MKMNHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNER 60
           MK NHSSNYLYNL INENGPKLRDALSNVRFRGLA EF LVNGQLQSFVFEIVNVVGNER
Sbjct: 367 MKTNHSSNYLYNLGINENGPKLRDALSNVRFRGLAGEFSLVNGQLQSFVFEIVNVVGNER 426

Query: 61  RSVGFWTPKAGLTTSLRHSGRKRELRPII 89
           RSVGFWTPK GLTTSLRHSGRK+ELR II
Sbjct: 427 RSVGFWTPKIGLTTSLRHSGRKKELRQII 455

[Close]

BLAST of CsGy6G016547.1 vs. NCBI nr
Match: KAE8652218.1 (hypothetical protein Csa_022484 [Cucumis sativus])

HSP 1 Score: 165 bits (418), Expect = 4.29e-45
Identity = 82/89 (92.13%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1   MKMNHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNER 60
           MK NHSSNYLYNL INENGPKLRDALSNVRFRGLA EF LVNGQLQSFVFEIVNVVGNER
Sbjct: 367 MKTNHSSNYLYNLGINENGPKLRDALSNVRFRGLAGEFSLVNGQLQSFVFEIVNVVGNER 426

Query: 61  RSVGFWTPKAGLTTSLRHSGRKRELRPII 89
           RSVGFWTPK GLTTSLRHSGRK+ELR II
Sbjct: 427 RSVGFWTPKIGLTTSLRHSGRKKELRQII 455

[Close]

BLAST of CsGy6G016547.1 vs. NCBI nr
Match: KAA0064864.1 (glutamate receptor 2.5-like [Cucumis melo var. makuwa])

HSP 1 Score: 160 bits (404), Expect = 3.29e-43
Identity = 78/89 (87.64%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1   MKMNHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNER 60
           MK N+SSNYLYNL IN+NGPKLRDALSNVRFRGLA EF LVNGQLQSF+FEIVNVVGNER
Sbjct: 367 MKTNYSSNYLYNLGINQNGPKLRDALSNVRFRGLAGEFSLVNGQLQSFIFEIVNVVGNER 426

Query: 61  RSVGFWTPKAGLTTSLRHSGRKRELRPII 89
           RSVGFWTPKAGLTTSLRHSG++  LRPII
Sbjct: 427 RSVGFWTPKAGLTTSLRHSGKESVLRPII 455

[Close]

BLAST of CsGy6G016547.1 vs. NCBI nr
Match: XP_016899964.1 (PREDICTED: glutamate receptor 2.5-like [Cucumis melo])

HSP 1 Score: 158 bits (400), Expect = 1.13e-42
Identity = 77/89 (86.52%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1   MKMNHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNER 60
           MK N+SSNYLYNL IN+NGPKLR+ALSNVRFRGLA EF LVNGQLQSFVFEIVNV+GNER
Sbjct: 351 MKTNYSSNYLYNLGINQNGPKLREALSNVRFRGLAGEFSLVNGQLQSFVFEIVNVIGNER 410

Query: 61  RSVGFWTPKAGLTTSLRHSGRKRELRPII 89
           RSVGFWTPKAGLTTSLRHSG++  LRPII
Sbjct: 411 RSVGFWTPKAGLTTSLRHSGKESVLRPII 439

[Close]

BLAST of CsGy6G016547.1 vs. ExPASy TrEMBL
Match: A0A5A7VC72 (Glutamate receptor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001770 PE=3 SV=1)

HSP 1 Score: 160 bits (404), Expect = 1.59e-43
Identity = 78/89 (87.64%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1   MKMNHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNER 60
           MK N+SSNYLYNL IN+NGPKLRDALSNVRFRGLA EF LVNGQLQSF+FEIVNVVGNER
Sbjct: 367 MKTNYSSNYLYNLGINQNGPKLRDALSNVRFRGLAGEFSLVNGQLQSFIFEIVNVVGNER 426

Query: 61  RSVGFWTPKAGLTTSLRHSGRKRELRPII 89
           RSVGFWTPKAGLTTSLRHSG++  LRPII
Sbjct: 427 RSVGFWTPKAGLTTSLRHSGKESVLRPII 455

[Close]

BLAST of CsGy6G016547.1 vs. ExPASy TrEMBL
Match: A0A1S4DVF3 (Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488568 PE=3 SV=1)

HSP 1 Score: 158 bits (400), Expect = 5.47e-43
Identity = 77/89 (86.52%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1   MKMNHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNER 60
           MK N+SSNYLYNL IN+NGPKLR+ALSNVRFRGLA EF LVNGQLQSFVFEIVNV+GNER
Sbjct: 351 MKTNYSSNYLYNLGINQNGPKLREALSNVRFRGLAGEFSLVNGQLQSFVFEIVNVIGNER 410

Query: 61  RSVGFWTPKAGLTTSLRHSGRKRELRPII 89
           RSVGFWTPKAGLTTSLRHSG++  LRPII
Sbjct: 411 RSVGFWTPKAGLTTSLRHSGKESVLRPII 439

[Close]

BLAST of CsGy6G016547.1 vs. ExPASy TrEMBL
Match: A0A0A0KG62 (ANF_receptor domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G309940 PE=4 SV=1)

HSP 1 Score: 111 bits (278), Expect = 8.10e-29
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0


Query: 36  SEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPKAGLTTSLRHSGRKRELRPII 89
           SEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPKAGLTTSLRHSGRKRELRPII
Sbjct: 144 SEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPKAGLTTSLRHSGRKRELRPII 197

[Close]

BLAST of CsGy6G016547.1 vs. ExPASy TrEMBL
Match: A0A6J1KPT9 (Glutamate receptor OS=Cucurbita maxima OX=3661 GN=LOC111496137 PE=3 SV=1)

HSP 1 Score: 114 bits (285), Expect = 1.95e-27
Identity = 54/85 (63.53%), Postives = 69/85 (81.18%), Query Frame = 0


Query: 5   HSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVG 64
           +SSNYL+N+ +N+NGP+LR+ALS+V F GLA EF L+NGQLQS +FEIVNV+GN RR+VG
Sbjct: 360 NSSNYLFNVGVNQNGPRLREALSDVTFMGLAGEFSLINGQLQSTLFEIVNVIGNGRRNVG 419

Query: 65  FWTPKAGLTTSLRHSGRKRELRPII 89
           FW+P+ GLT  L  SG  + LR II
Sbjct: 420 FWSPETGLTRKLVDSGGAKGLRSII 444

[Close]

BLAST of CsGy6G016547.1 vs. ExPASy TrEMBL
Match: A0A6J1GJM8 (Glutamate receptor OS=Cucurbita moschata OX=3662 GN=LOC111454463 PE=3 SV=1)

HSP 1 Score: 114 bits (285), Expect = 1.95e-27
Identity = 54/85 (63.53%), Postives = 69/85 (81.18%), Query Frame = 0


Query: 5   HSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVG 64
           +SSNYL+N+ +N+NGP+LR+ALS+V F GLA EF L+NGQLQS +FEIVNV+GN RR+VG
Sbjct: 365 NSSNYLFNVGVNQNGPRLREALSDVTFTGLAGEFSLINGQLQSTLFEIVNVIGNGRRNVG 424

Query: 65  FWTPKAGLTTSLRHSGRKRELRPII 89
           FW+P+ GLT  L  SG  + LR II
Sbjct: 425 FWSPETGLTRKLVDSGGAKGLRSII 449

[Close]

BLAST of CsGy6G016547.1 vs. TAIR 10
Match: AT2G29100.1 (glutamate receptor 2.9 )

HSP 1 Score: 84.3 bits (207), Expect = 5.3e-17
Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 0


Query: 10  LYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 69
           L N+ ++  GP L+ A S VRF GLA EF L++GQLQS  FEI+N VGNE R +GFWTP+
Sbjct: 349 LGNVGVSLYGPSLQKAFSEVRFNGLAGEFKLIDGQLQSPKFEIINFVGNEERIIGFWTPR 408

Query: 70  AGLTTSLRHSGRKRELRPII 90
            GL  +   S  K+ L P+I
Sbjct: 409 DGLMDAT--SSNKKTLGPVI 426

[Close]

BLAST of CsGy6G016547.1 vs. TAIR 10
Match: AT2G29120.1 (glutamate receptor 2.7 )

HSP 1 Score: 77.4 bits (189), Expect = 6.5e-15
Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 0


Query: 4   NHSSNYLYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSV 63
           N+ +N L  L ++  GP L  ALSNVRF GLA EF L+NGQL+S VF+++N++G+E R +
Sbjct: 354 NNKTN-LGTLGVSRYGPSLLKALSNVRFNGLAGEFELINGQLESSVFDVINIIGSEERII 413

Query: 64  GFWTPKAGLTTS 76
           G W P  G+  +
Sbjct: 414 GLWRPSNGIVNA 424

[Close]

BLAST of CsGy6G016547.1 vs. TAIR 10
Match: AT5G11210.1 (glutamate receptor 2.5 )

HSP 1 Score: 74.7 bits (182), Expect = 4.2e-14
Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 10  LYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 69
           L  L +  +GPKL DALS V F+G+A  F L NG+L++  F+I+N+  +  R+VGFW  K
Sbjct: 281 LDELGVALSGPKLLDALSTVSFKGVAGRFQLKNGKLEATTFKIINIEESGERTVGFWKSK 340

Query: 70  AGLTTSLR-----HSGRKRELRPII 90
            GL  SLR     HS R+  LRPII
Sbjct: 341 VGLVKSLRVDKVSHSSRR--LRPII 363

[Close]

BLAST of CsGy6G016547.1 vs. TAIR 10
Match: AT2G29110.1 (glutamate receptor 2.8 )

HSP 1 Score: 74.3 bits (181), Expect = 5.5e-14
Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 10  LYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 69
           L  L ++  GP L +ALS +RF GLA  F L++ QL+S  FEI+N VGNE R VGFWTP 
Sbjct: 352 LGTLHVSRYGPSLLEALSEIRFNGLAGRFNLIDRQLESPKFEIINFVGNEERIVGFWTPS 411

Query: 70  AGL 73
            GL
Sbjct: 412 NGL 414

[Close]

BLAST of CsGy6G016547.1 vs. TAIR 10
Match: AT2G24720.1 (glutamate receptor 2.2 )

HSP 1 Score: 72.4 bits (176), Expect = 2.1e-13
Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 10  LYNLDINENGPKLRDALSNVRFRGLASEFGLVNGQLQSFVFEIVNVVGNERRSVGFWTPK 69
           L  L +++ GPKL   +S V+F+GLA +F  V+GQLQ  VFEIVN++G   RS+GFWT  
Sbjct: 346 LDGLGLSQFGPKLLQTVSTVQFKGLAGDFHFVSGQLQPSVFEIVNMIGTGERSIGFWTEG 405

Query: 70  AGLTTSLRHSGR 82
            GL   L    R
Sbjct: 406 NGLVKKLDQEPR 417

The following BLAST results are available for this feature:

BLAST of CsGy6G016547.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81078	7.5e-16	52.50	Glutamate receptor 2.9 OS=Arabidopsis thaliana OX=3702 GN=GLR2.9 PE=2 SV=1	[more]
Q8LGN0	9.1e-14	48.61	Glutamate receptor 2.7 OS=Arabidopsis thaliana OX=3702 GN=GLR2.7 PE=2 SV=3	[more]
Q9LFN5	5.9e-13	48.24	Glutamate receptor 2.5 OS=Arabidopsis thaliana OX=3702 GN=GLR2.5 PE=2 SV=2	[more]
Q9C5V5	7.7e-13	55.56	Glutamate receptor 2.8 OS=Arabidopsis thaliana OX=3702 GN=GLR2.8 PE=2 SV=2	[more]
Q9SHV1	2.9e-12	48.61	Glutamate receptor 2.2 OS=Arabidopsis thaliana OX=3702 GN=GLR2.2 PE=2 SV=1	[more]

BLAST of CsGy6G016547.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647081.1	4.08e-57	100.00	hypothetical protein Csa_022998 [Cucumis sativus]	[more]
XP_031737065.1	4.15e-45	92.13	glutamate receptor 2.5 [Cucumis sativus]	[more]
KAE8652218.1	4.29e-45	92.13	hypothetical protein Csa_022484 [Cucumis sativus]	[more]
KAA0064864.1	3.29e-43	87.64	glutamate receptor 2.5-like [Cucumis melo var. makuwa]	[more]
XP_016899964.1	1.13e-42	86.52	PREDICTED: glutamate receptor 2.5-like [Cucumis melo]	[more]

BLAST of CsGy6G016547.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VC72	1.59e-43	87.64	Glutamate receptor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00...	[more]
A0A1S4DVF3	5.47e-43	86.52	Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488568 PE=3 SV=1	[more]
A0A0A0KG62	8.10e-29	100.00	ANF_receptor domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G30994...	[more]
A0A6J1KPT9	1.95e-27	63.53	Glutamate receptor OS=Cucurbita maxima OX=3661 GN=LOC111496137 PE=3 SV=1	[more]
A0A6J1GJM8	1.95e-27	63.53	Glutamate receptor OS=Cucurbita moschata OX=3662 GN=LOC111454463 PE=3 SV=1	[more]

BLAST of CsGy6G016547.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29100.1	5.3e-17	52.50	glutamate receptor 2.9	[more]
AT2G29120.1	6.5e-15	48.61	glutamate receptor 2.7	[more]
AT5G11210.1	4.2e-14	48.24	glutamate receptor 2.5	[more]
AT2G29110.1	5.5e-14	55.56	glutamate receptor 2.8	[more]
AT2G24720.1	2.1e-13	48.61	glutamate receptor 2.2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.2300		coord: 48..72 e-value: 1.8E-5 score: 26.2
None	No IPR available	GENE3D	3.40.50.2300		coord: 11..47 e-value: 1.8E-5 score: 26.2
None	No IPR available	PANTHER	PTHR34836:SF1	OS06G0188250 PROTEIN	coord: 3..88
None	No IPR available	PANTHER	PTHR34836	OS06G0188250 PROTEIN	coord: 3..88
IPR028082	Periplasmic binding protein-like I	SUPERFAMILY	53822	Periplasmic binding protein-like I	coord: 17..72

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy6G016547	CsGy6G016547	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy6G016547.1.exon1	CsGy6G016547.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy6G016547.1	cds.CsGy6G016547.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy6G016547.1	CsGy6G016547.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034220	ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015276	ligand-gated ion channel activity