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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGCCTGCCGTGAAGACGCTTCGCGAACGCCAGATCTCCCCTCGGTCAAAATTACATTCGCCATTGATCTGTCTGTAAATCAGATCTGACGCGATCGCCTCCATCCAAAAATCCACGCGTAGGTCTCCTGCAGATCAGACGAACCCAGACGATTGCGCGTTAACCTTCGCCCGCATCAGTTCACAACTCTGATTTCGTCCTATAATCAGATTAGACGCGTTCGTCCCCGTCCAATAACCGAGGTCCGACGAACCCAGCTCCAATTTCGTCCGATAATCAACTCCGATCTCGTCCGATTCACTCTCAGCTCCGATTCACTCTCAGTTTCGATTCACGTCCGTTTTCATCCGAGTCTGTTCGCAGATCCGATTAAAGTTTTGCCTTCATTCACATCAGATCTGAAGACATCCTGCCGTGAAGACACTCACCTGTTGGTAACCCACTGCCGTGAAGTAACATAA mRNA sequence ATGCCTGCCGTGAAGACGCTTCGCGAACGCCAGATCTCCCCTCGGTCAAAATTACATTCGCCATTGATCTGTCTATCAGACGAACCCAGACGATTGCGCGTTAACCTTCGCCCGCATCAGTTCACAACTCTGATTTCGTCCTATAATCAGATTAGACGCGTTCGTCCCCGTCCAATAACCGAGGTCCGACGAACCCAGCTCCAATTTCGTCCGATAATCAACTCCGATCTCGTCCGATTCACTCTCAGCTCCGATTCACTCTCAGTTTCGATTCACGTCCGTTTTCATCCGAGTCTGTTCGCAGATCCGATTAAAGTTTTGCCTTCATTCACATCAGATCTGAAGACATCCTGCCGTGAAGACACTCACCTGTTGGTAACCCACTGCCGTGAAGTAACATAA Coding sequence (CDS) ATGCCTGCCGTGAAGACGCTTCGCGAACGCCAGATCTCCCCTCGGTCAAAATTACATTCGCCATTGATCTGTCTATCAGACGAACCCAGACGATTGCGCGTTAACCTTCGCCCGCATCAGTTCACAACTCTGATTTCGTCCTATAATCAGATTAGACGCGTTCGTCCCCGTCCAATAACCGAGGTCCGACGAACCCAGCTCCAATTTCGTCCGATAATCAACTCCGATCTCGTCCGATTCACTCTCAGCTCCGATTCACTCTCAGTTTCGATTCACGTCCGTTTTCATCCGAGTCTGTTCGCAGATCCGATTAAAGTTTTGCCTTCATTCACATCAGATCTGAAGACATCCTGCCGTGAAGACACTCACCTGTTGGTAACCCACTGCCGTGAAGTAACATAA Protein sequence MPAVKTLRERQISPRSKLHSPLICLSDEPRRLRVNLRPHQFTTLISSYNQIRRVRPRPITEVRRTQLQFRPIINSDLVRFTLSSDSLSVSIHVRFHPSLFADPIKVLPSFTSDLKTSCREDTHLLVTHCREVT*
Homology
BLAST of CsGy6G013000.1 vs. NCBI nr
Match: KAE8646922.1 (hypothetical protein Csa_020733, partial [Cucumis sativus]) HSP 1 Score: 165 bits (418), Expect = 1.79e-50 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
Query: 51 IRRVRPRPITEVRRTQLQFRPIINSDLVRFTLSSDSLSVSIHVRFHPSLFADPIKVLPSF 110
IRRVRPRPITEVRRTQLQFRPIINSDLVRFTLSSDSLSVSIHVRFHPSLFADPIKVLPSF
Sbjct: 1 IRRVRPRPITEVRRTQLQFRPIINSDLVRFTLSSDSLSVSIHVRFHPSLFADPIKVLPSF 60
Query: 111 TSDLKTSCREDTHLLVTHCREVT 133
TSDLKTSCREDTHLLVTHCREVT
Sbjct: 61 TSDLKTSCREDTHLLVTHCREVT 83
BLAST of CsGy6G013000.1 vs. NCBI nr
Match: KAE8651893.1 (hypothetical protein Csa_006446 [Cucumis sativus]) HSP 1 Score: 121 bits (304), Expect = 9.93e-31 Identity = 64/79 (81.01%), Postives = 68/79 (86.08%), Query Frame = 0
Query: 24 CLSDEPRRLRVNLRPHQFTTLISSYNQIRRVRPRPITEVRRTQLQFRPIINSDLVRFTLS 83
C SDEPRRLRV+LRPHQFTTLISS NQIRRV PRPIT+VRRTQLQFRPIINSDLVRFTLS
Sbjct: 182 CRSDEPRRLRVSLRPHQFTTLISSDNQIRRVHPRPITQVRRTQLQFRPIINSDLVRFTLS 241
Query: 84 SDSLSVSIHVRFHPSLFAD 102
SDSLS IH + +L D
Sbjct: 242 SDSLSAPIHSQLRFTLSFD 260
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAE8646922.1 | 1.79e-50 | 100.00 | hypothetical protein Csa_020733, partial [Cucumis sativus] | [more] |
| KAE8651893.1 | 9.93e-31 | 81.01 | hypothetical protein Csa_006446 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsGy6G013000.1.exon1 | CsGy6G013000.1.exon1 | exon |
| CsGy6G013000.1.exon2 | CsGy6G013000.1.exon2 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| cds.CsGy6G013000.1 | cds.CsGy6G013000.1 | CDS |
| cds.CsGy6G013000.1 | cds.CsGy6G013000.1_2 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsGy6G013000.1 | CsGy6G013000.1-protein | polypeptide |
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