CsGy6G011880.1 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G011880.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	auxin-responsive protein SAUR32-like
Location	Gy14Chr6: 10362217 .. 10362624 (+)
Sequence length	408
RNA-Seq Expression	CsGy6G011880.1
Synteny	CsGy6G011880.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAGCATGTGACCATAGCCAAGAAGAAAAATGGCATTGTAAAGCTCAAGACCGCCGTTGGGAAGCTTCAAAGAAGCCTCTCTTTAGGTCGAAGGTCTGATTCTGGTCAAGATGAGTGTGATTATGCAGTTGGGGATGATGAATCCAGTACTCCGGTACCGGAAGATGTCAAAGAAGGGCATTTTGCGGTAGTGGCAGTTGATGCCGAGGAGCCAAAACGGTTTGTCGTTCCGTTGAGTTGCTTGACAAATCCAACATTTTTAAGGCTTCTAGAGGCTGCAGCGGAGGAGTATGGATTTGATCATGAAGGGGCGCTGACTGTACCGTGTCGACCAAGTGAGCTCGAGCGAATCTTGGCGGAGGAATGGGTGGAAGAGGAGGAGGAGAATGGGTGCATTTGGTGA

mRNA sequence

ATGGCTAAGCATGTGACCATAGCCAAGAAGAAAAATGGCATTGTAAAGCTCAAGACCGCCGTTGGGAAGCTTCAAAGAAGCCTCTCTTTAGGTCGAAGGTCTGATTCTGGTCAAGATGAGTGTGATTATGCAGTTGGGGATGATGAATCCAGTACTCCGGTACCGGAAGATGTCAAAGAAGGGCATTTTGCGGTAGTGGCAGTTGATGCCGAGGAGCCAAAACGGTTTGTCGTTCCGTTGAGTTGCTTGACAAATCCAACATTTTTAAGGCTTCTAGAGGCTGCAGCGGAGGAGTATGGATTTGATCATGAAGGGGCGCTGACTGTACCGTGTCGACCAAGTGAGCTCGAGCGAATCTTGGCGGAGGAATGGGTGGAAGAGGAGGAGGAGAATGGGTGCATTTGGTGA

Coding sequence (CDS)

ATGGCTAAGCATGTGACCATAGCCAAGAAGAAAAATGGCATTGTAAAGCTCAAGACCGCCGTTGGGAAGCTTCAAAGAAGCCTCTCTTTAGGTCGAAGGTCTGATTCTGGTCAAGATGAGTGTGATTATGCAGTTGGGGATGATGAATCCAGTACTCCGGTACCGGAAGATGTCAAAGAAGGGCATTTTGCGGTAGTGGCAGTTGATGCCGAGGAGCCAAAACGGTTTGTCGTTCCGTTGAGTTGCTTGACAAATCCAACATTTTTAAGGCTTCTAGAGGCTGCAGCGGAGGAGTATGGATTTGATCATGAAGGGGCGCTGACTGTACCGTGTCGACCAAGTGAGCTCGAGCGAATCTTGGCGGAGGAATGGGTGGAAGAGGAGGAGGAGAATGGGTGCATTTGGTGA

Protein sequence

MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILAEEWVEEEEENGCIW*

Homology

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BLAST of CsGy6G011880.1 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.9e-11
Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = 0


Query: 5   VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKEGHFA 64
           + I KK + + +       L+R  SLG+++  G DE             +P DV +GHF 
Sbjct: 1   MAIMKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDE-----------DCLPLDVPKGHFP 60

Query: 65  VVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPC 112
           V     E   R++VP+S LT+P F  LL+ A EE+GFDH+  LT+PC
Sbjct: 61  VYV--GENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPC 94

[Close]

BLAST of CsGy6G011880.1 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-09
Identity = 27/67 (40.30%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 46  GDDESSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEG 105
           G +   + +P DV +GHF V     E   R++VP+SCL +PTF  LL+ + EE+GF+H+ 
Sbjct: 27  GKNNDDSGLPNDVPKGHFVVYV--GERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDM 86

Query: 106 ALTVPCR 113
            + +PC+
Sbjct: 87  GIIIPCQ 91

[Close]

BLAST of CsGy6G011880.1 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-08
Identity = 27/67 (40.30%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 56  EDVKEGHFAV-VAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPS 115
           +DV +G  A+ V    EE +RF+VP+    +P F++LL+ A +EYGFD +G +T+PC   
Sbjct: 22  KDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVE 81

Query: 116 ELERILA 122
           E   + A
Sbjct: 82  EFRYVQA 88

[Close]

BLAST of CsGy6G011880.1 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-07
Identity = 30/71 (42.25%), Postives = 40/71 (56.34%), Query Frame = 0


Query: 41  CDYAVGDDESSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYG 100
           C Y   DD     +P+DV +GHF V         R++VP+S L +  F  LL  A EE+G
Sbjct: 36  CYYNQEDD-----LPQDVPKGHFPVYV--GPNRSRYIVPISWLHHSEFQTLLRLAEEEFG 95

Query: 101 FDHEGALTVPC 112
           FDH+  LT+PC
Sbjct: 96  FDHDMGLTIPC 99

[Close]

BLAST of CsGy6G011880.1 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-07
Identity = 28/66 (42.42%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 57  DVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHE-GALTVPCRPSE 116
           DV +G+ AV   D  + +RF +P+S L  P+F  LL  A EE+G+DH  G LT+PC+  E
Sbjct: 25  DVPKGYAAVYVGD--KMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEE 84

Query: 117 LERILA 122
              + A
Sbjct: 85  FLNVTA 88

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BLAST of CsGy6G011880.1 vs. NCBI nr
Match: XP_004145816.1 (auxin-responsive protein SAUR50 [Cucumis sativus])

HSP 1 Score: 272 bits (696), Expect = 4.18e-92
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60
           MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE
Sbjct: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120

Query: 121 AEEWVEEEEENGCIW 135
           AEEWVEEEEENGCIW
Sbjct: 121 AEEWVEEEEENGCIW 135

[Close]

BLAST of CsGy6G011880.1 vs. NCBI nr
Match: KAE8646889.1 (hypothetical protein Csa_020692 [Cucumis sativus])

HSP 1 Score: 268 bits (685), Expect = 3.79e-90
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60
           MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE
Sbjct: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120

Query: 121 AEEWVEEEEENGCI 134
           AEEWVEEEEENGCI
Sbjct: 121 AEEWVEEEEENGCI 134

[Close]

BLAST of CsGy6G011880.1 vs. NCBI nr
Match: XP_038902788.1 (auxin-responsive protein SAUR50-like [Benincasa hispida])

HSP 1 Score: 260 bits (664), Expect = 3.18e-87
Identity = 132/135 (97.78%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60
           MAK VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDY VGDDES TPVPEDVKE
Sbjct: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDES-TPVPEDVKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120

Query: 121 AEEWVEEEEENGCIW 135
           AEEWVEEEEENGCIW
Sbjct: 121 AEEWVEEEEENGCIW 134

[Close]

BLAST of CsGy6G011880.1 vs. NCBI nr
Match: XP_008465358.1 (PREDICTED: auxin-responsive protein SAUR32-like [Cucumis melo] >KAA0035232.1 auxin-responsive protein SAUR32-like [Cucumis melo var. makuwa] >TYK22387.1 auxin-responsive protein SAUR32-like [Cucumis melo var. makuwa])

HSP 1 Score: 249 bits (636), Expect = 6.33e-83
Identity = 129/137 (94.16%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60
           MAK VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECD  VGDD SST VPEDVKE
Sbjct: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDDEVGDDGSSTLVPEDVKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGF+HEGALTVPCRPSELERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFEHEGALTVPCRPSELERIL 120

Query: 121 AEEWVEEEE--ENGCIW 135
           AEEWVEEEE  ENGCIW
Sbjct: 121 AEEWVEEEEDEENGCIW 137

[Close]

BLAST of CsGy6G011880.1 vs. NCBI nr
Match: XP_022140427.1 (auxin-responsive protein SAUR50-like [Momordica charantia])

HSP 1 Score: 233 bits (595), Expect = 1.09e-76
Identity = 116/135 (85.93%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60
           MAK VT AKKKNGIVKLKTAVGKLQRSLSLGRRS++  DE DY  GDD+S T VP D+KE
Sbjct: 1   MAKLVTNAKKKNGIVKLKTAVGKLQRSLSLGRRSNASHDEFDYEAGDDDSGTSVPGDIKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFV PLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSE+ERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVAPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSEMERIL 120

Query: 121 AEEWVEEEEENGCIW 135
           AE+W EEEEE+GCIW
Sbjct: 121 AEQWGEEEEESGCIW 135

[Close]

BLAST of CsGy6G011880.1 vs. ExPASy TrEMBL
Match: A0A0A0KGI2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147590 PE=3 SV=1)

HSP 1 Score: 272 bits (696), Expect = 2.02e-92
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60
           MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE
Sbjct: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120

Query: 121 AEEWVEEEEENGCIW 135
           AEEWVEEEEENGCIW
Sbjct: 121 AEEWVEEEEENGCIW 135

[Close]

BLAST of CsGy6G011880.1 vs. ExPASy TrEMBL
Match: A0A5D3DFC2 (Auxin-responsive protein SAUR32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00110 PE=3 SV=1)

HSP 1 Score: 249 bits (636), Expect = 3.07e-83
Identity = 129/137 (94.16%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60
           MAK VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECD  VGDD SST VPEDVKE
Sbjct: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDDEVGDDGSSTLVPEDVKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGF+HEGALTVPCRPSELERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFEHEGALTVPCRPSELERIL 120

Query: 121 AEEWVEEEE--ENGCIW 135
           AEEWVEEEE  ENGCIW
Sbjct: 121 AEEWVEEEEDEENGCIW 137

[Close]

BLAST of CsGy6G011880.1 vs. ExPASy TrEMBL
Match: A0A1S3CNL2 (auxin-responsive protein SAUR32-like OS=Cucumis melo OX=3656 GN=LOC103502995 PE=3 SV=1)

HSP 1 Score: 249 bits (636), Expect = 3.07e-83
Identity = 129/137 (94.16%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60
           MAK VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECD  VGDD SST VPEDVKE
Sbjct: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDDEVGDDGSSTLVPEDVKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGF+HEGALTVPCRPSELERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFEHEGALTVPCRPSELERIL 120

Query: 121 AEEWVEEEE--ENGCIW 135
           AEEWVEEEE  ENGCIW
Sbjct: 121 AEEWVEEEEDEENGCIW 137

[Close]

BLAST of CsGy6G011880.1 vs. ExPASy TrEMBL
Match: A0A6J1CGW5 (auxin-responsive protein SAUR50-like OS=Momordica charantia OX=3673 GN=LOC111011107 PE=3 SV=1)

HSP 1 Score: 233 bits (595), Expect = 5.29e-77
Identity = 116/135 (85.93%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60
           MAK VT AKKKNGIVKLKTAVGKLQRSLSLGRRS++  DE DY  GDD+S T VP D+KE
Sbjct: 1   MAKLVTNAKKKNGIVKLKTAVGKLQRSLSLGRRSNASHDEFDYEAGDDDSGTSVPGDIKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFV PLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSE+ERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVAPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSEMERIL 120

Query: 121 AEEWVEEEEENGCIW 135
           AE+W EEEEE+GCIW
Sbjct: 121 AEQWGEEEEESGCIW 135

[Close]

BLAST of CsGy6G011880.1 vs. ExPASy TrEMBL
Match: A0A6J1K3Y0 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111491474 PE=3 SV=1)

HSP 1 Score: 213 bits (541), Expect = 8.17e-69
Identity = 116/135 (85.93%), Postives = 119/135 (88.15%), Query Frame = 0


Query: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60
           MAK    AKK NGIVKLKTAVG+LQRSLSLGRRS+SG  E D  VGDD+S TPVPEDVKE
Sbjct: 1   MAKPEASAKK-NGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDREVGDDDS-TPVPEDVKE 60

Query: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120
           GHFAVVAVDAEEPKRFVVPLSCL NPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120

Query: 121 AEEWVEEEE-ENGCI 134
           AEEW EEEE EN C 
Sbjct: 121 AEEWEEEEENENRCF 133

[Close]

BLAST of CsGy6G011880.1 vs. TAIR 10
Match: AT2G28085.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.1 bits (261), Expect = 4.4e-23
Identity = 62/118 (52.54%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 9   KKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKEGHFAVVAV 68
           KK  GIVKLK  V +L +     +   S +  C    G D     VP+DVKEGHFAV+AV
Sbjct: 14  KKMGGIVKLKNVVERLVQI----KGFSSAKKPCPEEYGRD----CVPKDVKEGHFAVIAV 73

Query: 69  DA--EEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILAEEW 125
           D   E  +RFVVPL  L +P F +LLE A EEYGF H+GAL VPCRPS L  IL E+W
Sbjct: 74  DGYHEPTQRFVVPLMFLEHPMFRKLLEQAEEEYGFYHDGALMVPCRPSHLRMILTEQW 123

[Close]

BLAST of CsGy6G011880.1 vs. TAIR 10
Match: AT3G09870.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17
Identity = 47/105 (44.76%), Postives = 64/105 (60.95%), Query Frame = 0


Query: 16  KLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKEGHFAVVAVDAEEPKR 75
           K K  + KLQ      R S    + C++   +  +++ +P DVKEGH AV+AV  E  KR
Sbjct: 4   KFKIFMRKLQICCLFTRFSKRVGNYCEFE-EEGNAASMIPSDVKEGHVAVIAVKGERIKR 63

Query: 76  FVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 121
           FV+ L  L  P FLRLLE A EE+GF   G LT+PC+P E+++IL
Sbjct: 64  FVLELEELNKPEFLRLLEQAREEFGFQPRGPLTIPCQPEEVQKIL 107

[Close]

BLAST of CsGy6G011880.1 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 68.9 bits (167), Expect = 3.5e-12
Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = 0


Query: 5   VTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKEGHFA 64
           + I KK + + +       L+R  SLG+++  G DE             +P DV +GHF 
Sbjct: 1   MAIMKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDE-----------DCLPLDVPKGHFP 60

Query: 65  VVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPC 112
           V     E   R++VP+S LT+P F  LL+ A EE+GFDH+  LT+PC
Sbjct: 61  VYV--GENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPC 94

[Close]

BLAST of CsGy6G011880.1 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 68.2 bits (165), Expect = 5.9e-12
Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 9   KKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKEGHFAVVAV 68
           KK N + +       L+R  SLG++  +         G+DE+ +P+  +V +GHF V   
Sbjct: 4   KKANKLTQTAMIKQILKRCSSLGKKQSN-------VYGEDENGSPL--NVPKGHFVVYV- 63

Query: 69  DAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPC 112
             E   R+VVP+S LT P F  LL+ A EE+GFDH+  LT+PC
Sbjct: 64  -GENRVRYVVPISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPC 95

[Close]

BLAST of CsGy6G011880.1 vs. TAIR 10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 64.3 bits (155), Expect = 8.6e-11
Identity = 51/152 (33.55%), Postives = 74/152 (48.68%), Query Frame = 0


Query: 14  IVKLKTAVGKLQRSLSLGRRSDSGQ---------------------DECDYAVGDDESST 73
           IV+LK  + K Q ++++G +SD G+                       CD    D+E++ 
Sbjct: 15  IVRLKEILQKWQ-TVTIGSKSDDGELGARKHTAIISPVINKRLLDLKTCD---SDEETTC 74

Query: 74  PVPE---DVKEGHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTV 130
             PE   DV +G+ AV      E +RF++P + L++  F  LLE A EEYGFDH GALT+
Sbjct: 75  QSPEPPPDVPKGYLAVYV--GPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTI 134

The following BLAST results are available for this feature:

BLAST of CsGy6G011880.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	4.9e-11	37.38	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
P0DKL1	1.2e-09	40.30	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
Q9ZUZ3	1.3e-08	40.30	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
Q9SL45	1.1e-07	42.25	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P33079	1.9e-07	42.42	Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CsGy6G011880.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145816.1	4.18e-92	100.00	auxin-responsive protein SAUR50 [Cucumis sativus]	[more]
KAE8646889.1	3.79e-90	100.00	hypothetical protein Csa_020692 [Cucumis sativus]	[more]
XP_038902788.1	3.18e-87	97.78	auxin-responsive protein SAUR50-like [Benincasa hispida]	[more]
XP_008465358.1	6.33e-83	94.16	PREDICTED: auxin-responsive protein SAUR32-like [Cucumis melo] >KAA0035232.1 aux...	[more]
XP_022140427.1	1.09e-76	85.93	auxin-responsive protein SAUR50-like [Momordica charantia]	[more]

BLAST of CsGy6G011880.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGI2	2.02e-92	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147590 PE=3 SV=1	[more]
A0A5D3DFC2	3.07e-83	94.16	Auxin-responsive protein SAUR32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CNL2	3.07e-83	94.16	auxin-responsive protein SAUR32-like OS=Cucumis melo OX=3656 GN=LOC103502995 PE=...	[more]
A0A6J1CGW5	5.29e-77	85.93	auxin-responsive protein SAUR50-like OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1K3Y0	8.17e-69	85.93	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111491474...	[more]

BLAST of CsGy6G011880.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28085.1	4.4e-23	52.54	SAUR-like auxin-responsive protein family	[more]
AT3G09870.1	1.2e-17	44.76	SAUR-like auxin-responsive protein family	[more]
AT4G34760.1	3.5e-12	37.38	SAUR-like auxin-responsive protein family	[more]
AT1G75580.1	5.9e-12	38.83	SAUR-like auxin-responsive protein family	[more]
AT3G43120.1	8.6e-11	33.55	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 39..120 e-value: 6.7E-20 score: 71.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..56
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 21..130
None	No IPR available	PANTHER	PTHR31374:SF334	AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE	coord: 21..130

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy6G011880	CsGy6G011880	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy6G011880.1.exon1	CsGy6G011880.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy6G011880.1	cds.CsGy6G011880.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy6G011880.1	CsGy6G011880.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin