CsGy6G004050.1 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G004050.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Transcription repressor
Location	Gy14Chr6: 3778494 .. 3779337 (+)
Sequence length	844
RNA-Seq Expression	CsGy6G004050.1
Synteny	CsGy6G004050.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTCTCTCACTATATAGTGTGTATGCATATTTATTTAAAGAGAGAAGATGCTCATAATCAAATTTAAGAGAATATGGAGTGCTAGATTTTTAATTAAACAACAACAATGGGGAAGAAGATGAAGCTACTTCCTTCTCTTTTCAAGAACAGAGCATCGCCGGACCGCCCATGGCAATGGCCCTTATGCGGACCTTCCAAAACTCCATCATTCAGAGCCGGCCCCGACGACCACCAAATTTTCTCTACACTCAACTCAATCTTCTTCGACAATTTCTTCTCCGATCCAATCCACACTCCCGATTCTTGGTTCGCTACCTCCTCTCTCTTCGAGTCCGCCAGGGTTTCGCTTTCCACCGAGTTCGAGGACGATTTGGAGTTGGTGATCCGAGGCGCTAAATCAGAGCGGTTGATCTTCGAGCCTGGTGAAACGAATTCCATTTTGGAGAAATCCAGAGGCGTAGAAGAAGGTGGAAAGTGTGAAGAATCGATTCGATTCGAAGGAAGTGTGGTTGTGTTAATGGCGATGGAATCTGAAGATCCATACCTGGATTTTAGAAGATCGATGGAGGAGATGGTGGAGTGCCATGGAATTAGGAATTGGGAGTGGTTGGAAGAGTTGTTGAATTGGTATCTGAGAATGAATGGGATGAAGAATCATGGTTATATTTTAGGTGCTTTTGTTGATTTGCTTGTTGATCTTGGCGGCGGCGATGGTTCTACGGATTCCACCTCCATATTTTCCGATGATTTGATCATACAGCGCCATGATCGGGAGAGATGCGACGTTTAAATCGTGCTTTCTTTGTGTTCATACTTCCCTTTTTCTTTCCTTATTACACTCTT

mRNA sequence

GTGTCTCTCACTATATAGTGTGTATGCATATTTATTTAAAGAGAGAAGATGCTCATAATCAAATTTAAGAGAATATGGAGTGCTAGATTTTTAATTAAACAACAACAATGGGGAAGAAGATGAAGCTACTTCCTTCTCTTTTCAAGAACAGAGCATCGCCGGACCGCCCATGGCAATGGCCCTTATGCGGACCTTCCAAAACTCCATCATTCAGAGCCGGCCCCGACGACCACCAAATTTTCTCTACACTCAACTCAATCTTCTTCGACAATTTCTTCTCCGATCCAATCCACACTCCCGATTCTTGGTTCGCTACCTCCTCTCTCTTCGAGTCCGCCAGGGTTTCGCTTTCCACCGAGTTCGAGGACGATTTGGAGTTGGTGATCCGAGGCGCTAAATCAGAGCGGTTGATCTTCGAGCCTGGTGAAACGAATTCCATTTTGGAGAAATCCAGAGGCGTAGAAGAAGGTGGAAAGTGTGAAGAATCGATTCGATTCGAAGGAAGTGTGGTTGTGTTAATGGCGATGGAATCTGAAGATCCATACCTGGATTTTAGAAGATCGATGGAGGAGATGGTGGAGTGCCATGGAATTAGGAATTGGGAGTGGTTGGAAGAGTTGTTGAATTGGTATCTGAGAATGAATGGGATGAAGAATCATGGTTATATTTTAGGTGCTTTTGTTGATTTGCTTGTTGATCTTGGCGGCGGCGATGGTTCTACGGATTCCACCTCCATATTTTCCGATGATTTGATCATACAGCGCCATGATCGGGAGAGATGCGACGTTTAAATCGTGCTTTCTTTGTGTTCATACTTCCCTTTTTCTTTCCTTATTACACTCTT

Coding sequence (CDS)

ATGGGGAAGAAGATGAAGCTACTTCCTTCTCTTTTCAAGAACAGAGCATCGCCGGACCGCCCATGGCAATGGCCCTTATGCGGACCTTCCAAAACTCCATCATTCAGAGCCGGCCCCGACGACCACCAAATTTTCTCTACACTCAACTCAATCTTCTTCGACAATTTCTTCTCCGATCCAATCCACACTCCCGATTCTTGGTTCGCTACCTCCTCTCTCTTCGAGTCCGCCAGGGTTTCGCTTTCCACCGAGTTCGAGGACGATTTGGAGTTGGTGATCCGAGGCGCTAAATCAGAGCGGTTGATCTTCGAGCCTGGTGAAACGAATTCCATTTTGGAGAAATCCAGAGGCGTAGAAGAAGGTGGAAAGTGTGAAGAATCGATTCGATTCGAAGGAAGTGTGGTTGTGTTAATGGCGATGGAATCTGAAGATCCATACCTGGATTTTAGAAGATCGATGGAGGAGATGGTGGAGTGCCATGGAATTAGGAATTGGGAGTGGTTGGAAGAGTTGTTGAATTGGTATCTGAGAATGAATGGGATGAAGAATCATGGTTATATTTTAGGTGCTTTTGTTGATTTGCTTGTTGATCTTGGCGGCGGCGATGGTTCTACGGATTCCACCTCCATATTTTCCGATGATTTGATCATACAGCGCCATGATCGGGAGAGATGCGACGTTTAA

Protein sequence

MGKKMKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSDPIHTPDSWFATSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVEEGGKCEESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMNGMKNHGYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQRHDRERCDV*

Homology

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BLAST of CsGy6G004050.1 vs. ExPASy Swiss-Prot
Match: Q9FMC8 (Transcription repressor OFP13 OS=Arabidopsis thaliana OX=3702 GN=OFP13 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.3e-35
Identity = 108/237 (45.57%), Postives = 134/237 (56.54%), Query Frame = 0


Query: 1   MGKKMKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSD- 60
           MGKK   L SLFK  A        PLC  +KT SFR G D   +  T+NS+FFD+  ++ 
Sbjct: 1   MGKKKMKLSSLFKGGAG--GLLAVPLCYNAKTLSFRVGDD---MIKTVNSVFFDHHHNNN 60

Query: 61  ------PIHTPDSWFATSSLFESARVSLSTEFEDD-----LELVIRG-AKSERLIFEPGE 120
                    TP+SWF  SS  E+A  S STE + D     LE+V+RG  +SERL F+PG 
Sbjct: 61  NGGDLLEAETPESWFTNSS--ETA--SHSTESDQDLDAESLEMVVRGVVRSERLFFDPGV 120

Query: 121 TNSILEKSRGVEEGGKC------------EESIRFEGSVVVLMAMESEDPYLDFRRSMEE 180
           T+SILE+   +EE  K             + S   E  + V +AMESEDPY DFRRSMEE
Sbjct: 121 TSSILEE---IEEKSKSDLKSKETVAVGEDRSTPIE-EISVAVAMESEDPYGDFRRSMEE 180

Query: 181 MVECHG--IRNWEWLEELLNWYLRMNGMKNHGYILGAFVDLLVDLGGGDGSTDSTSI 211
           MV  HG   ++WE LE +L WYLRMNG K+HG I+ AFVDLL  L        S S+
Sbjct: 181 MVTSHGELAKDWESLESMLAWYLRMNGRKSHGVIVSAFVDLLSGLSDSGAGITSASV 224

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BLAST of CsGy6G004050.1 vs. ExPASy Swiss-Prot
Match: Q9SJ45 (Transcription repressor OFP15 OS=Arabidopsis thaliana OX=3702 GN=OFP15 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-22
Identity = 83/202 (41.09%), Postives = 108/202 (53.47%), Query Frame = 0


Query: 8   LPSLFKNRA-------SPDRPWQWPLCGPS-KTPSFRAGPDDHQIFSTLNSIFFDNFFSD 67
           LP L KN +       S    W WP C  + KT SFRA         T+        F++
Sbjct: 3   LPFLNKNHSTSSYSSNSSSSSWPWPSCNQNPKTLSFRA---------TIT-------FTN 62

Query: 68  PIHTPDSWFATSSLFESARVSLSTEFEDDLELVIRGAK-SERLIFE-PGETNSILEKSRG 127
           PIH  D         +   +    E  D +E VI+G + SERLIFE  GETNSILE    
Sbjct: 63  PIHDQDD--------DELDLLDPPEITDSVENVIKGLRSSERLIFESKGETNSILE---- 122

Query: 128 VEEGGKCEESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGI-RNWEWLEELLNWYL 187
            E   K EE    EG   +L ++ES+DPY DF+RSMEEMVE H +  +W+ LE+LL  +L
Sbjct: 123 -EATSKREEEDEEEG--FMLFSLESDDPYSDFKRSMEEMVEAHALHHDWKSLEKLLLQFL 173

Query: 188 RMNGMKNHGYILGAFVDLLVDL 199
           ++N   +H YI  AFVDLL++L
Sbjct: 183 KVNAKTSHRYIFAAFVDLLMNL 173

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BLAST of CsGy6G004050.1 vs. ExPASy Swiss-Prot
Match: Q9SVD5 (Transcription repressor OFP18 OS=Arabidopsis thaliana OX=3702 GN=OFP18 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.8e-16
Identity = 78/236 (33.05%), Postives = 122/236 (51.69%), Query Frame = 0


Query: 1   MGKKMKL--------LPSLFKNRASPDRPWQWPLCGPS--KTPSFRAGPDDHQIFSTLNS 60
           M +KMKL          S   N +S    W WP       KT S +A      I +    
Sbjct: 1   MVRKMKLPFLNKNTSSSSFSSNSSSSSSSWPWPSSHQQNLKTISSKAS----FIVNKPKD 60

Query: 61  IFFD-----NFFSDPIHTPDSWFATSSLFESARVSLSTEFEDDLELVIRGAK-SERLIFE 120
           ++       +F S P  +  S F+++    S  +    E E  +E VI+G K S+RLIFE
Sbjct: 61  VYEPEPPPRSFSSSPSSSSYSSFSST----SHAIENPPEIE-SIENVIKGLKSSKRLIFE 120

Query: 121 -PGETNSILEKSRGVEEGGKCEESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGI- 180
             G +NSILE++   ++  + E+ +       +L+++ES DPY DF+ SME+MVE H + 
Sbjct: 121 RRGTSNSILEEATKRDDHEEEEDGL-------MLLSLESNDPYTDFKNSMEKMVEVHVLH 180

Query: 181 RNWEWLEELLNWYLRMNGMKNHGYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQ 219
            +W  LE+LL W+L++N   +H YI  AFVDL+++L  G  S D     + D++++
Sbjct: 181 HDWISLEKLLFWFLKVNVKASHRYIFAAFVDLVLNLAVGP-SKDVAGEPNSDVVVE 219

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BLAST of CsGy6G004050.1 vs. ExPASy Swiss-Prot
Match: F4I8R6 (Transcription repressor OFP12 OS=Arabidopsis thaliana OX=3702 GN=OFP12 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.0e-08
Identity = 51/156 (32.69%), Postives = 73/156 (46.79%), Query Frame = 0


Query: 64  PDSWFATSSLFESARVSLSTEFED---------------DLELVIRGAKSERLIF-EPGE 123
           P S F  S+   +   S S  ++D               DL  V+    S R  F  PG 
Sbjct: 67  PSSTFTASTSTAANSSSSSASYDDSDNYGFAPDDDSPPPDLTAVL---ASRRFFFSSPGC 126

Query: 124 TNSILEKSRGVEEGGKCEESIR-FEGSVVVLMAMESEDPYLDFRRSMEEMVE----CHGI 183
           +NSI + S  +      + + R   G   V   ++S DPY DFRRSM+EM++       +
Sbjct: 127 SNSITD-SPDLRCRDNYDTATRLLTGGTAVKHYVQSPDPYNDFRRSMQEMIDAVTNAGDL 186

Query: 184 RNWEWLEELLNWYLRMNGMKNHGYILGAFVDLLVDL 199
           R +E+L ELL  YL +N    H +I+ AF D+LV L
Sbjct: 187 RRYEFLHELLLSYLSLNAADTHKFIIRAFADILVSL 218

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BLAST of CsGy6G004050.1 vs. ExPASy Swiss-Prot
Match: Q94CV1 (Transcription repressor OFP8 OS=Oryza sativa subsp. japonica OX=39947 GN=OFP8 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.0e-08
Identity = 58/193 (30.05%), Postives = 86/193 (44.56%), Query Frame = 0


Query: 20  RPWQWPLCGPSKTPSFRAG---PDDHQIFSTLNSIFF---DNFFSDPIHTPDSW----FA 79
           RP  + +   S + SFR G   P      ST  +  F            T  SW    F 
Sbjct: 27  RPKLFSIFSSSSSSSFRRGGSKPKSPNASSTSTTTAFTATTGGAGTATSTDSSWGPASFT 86

Query: 80  TSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVEEGGKCEESIR 139
           T+SLFE    + + + ++ LE   R  +  R     G T+     +RG + GG  +E  +
Sbjct: 87  TNSLFEEP--AAAQQEQEQLETRRRRRQQRRRRRRAGATSF----ARGGDVGGHDDEQQQ 146

Query: 140 FE--------GSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMNGM 195
            +            V +A+ES +PY DFR SM +MV    I  W+ L +LL+ +L +N  
Sbjct: 147 LQEQAPYRRVAKESVAVAVESAEPYEDFRESMVQMVVEKEIYAWDDLNDLLHQFLSLNSP 206

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BLAST of CsGy6G004050.1 vs. NCBI nr
Match: KGN46052.1 (hypothetical protein Csa_005443 [Cucumis sativus])

HSP 1 Score: 466 bits (1198), Expect = 1.28e-165
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MGKKMKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSDP 60
           MGKKMKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSDP
Sbjct: 1   MGKKMKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSDP 60

Query: 61  IHTPDSWFATSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVEE 120
           IHTPDSWFATSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVEE
Sbjct: 61  IHTPDSWFATSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVEE 120

Query: 121 GGKCEESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMNG 180
           GGKCEESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMNG
Sbjct: 121 GGKCEESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMNG 180

Query: 181 MKNHGYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQRHDRERCDV 227
           MKNHGYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQRHDRERCDV
Sbjct: 181 MKNHGYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQRHDRERCDV 227

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BLAST of CsGy6G004050.1 vs. NCBI nr
Match: XP_004140993.3 (transcription repressor OFP13 [Cucumis sativus])

HSP 1 Score: 458 bits (1178), Expect = 1.24e-162
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 5   MKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSDPIHTP 64
           MKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSDPIHTP
Sbjct: 1   MKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSDPIHTP 60

Query: 65  DSWFATSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVEEGGKC 124
           DSWFATSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVEEGGKC
Sbjct: 61  DSWFATSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVEEGGKC 120

Query: 125 EESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMNGMKNH 184
           EESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMNGMKNH
Sbjct: 121 EESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMNGMKNH 180

Query: 185 GYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQRHDRERCDV 227
           GYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQRHDRERCDV
Sbjct: 181 GYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQRHDRERCDV 223

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BLAST of CsGy6G004050.1 vs. NCBI nr
Match: XP_008456619.1 (PREDICTED: transcription repressor OFP13-like [Cucumis melo] >TYK11780.1 transcription repressor OFP13-like [Cucumis melo var. makuwa])

HSP 1 Score: 412 bits (1058), Expect = 2.83e-144
Identity = 206/228 (90.35%), Postives = 212/228 (92.98%), Query Frame = 0


Query: 1   MGKKMKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSDP 60
           MGKKMKLLPSLFKNR SPDRPWQWPLCG SKTPSFRA P  HQIF+TLNS FF NF SDP
Sbjct: 1   MGKKMKLLPSLFKNRQSPDRPWQWPLCGTSKTPSFRA-PHHHQIFTTLNSTFFHNFLSDP 60

Query: 61  IHTPDSWFATSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVE- 120
           IHTPDSWFA SSLFESARVSLSTEFEDDLELVI+GAKSERLIFEPGETNSIL++SRG + 
Sbjct: 61  IHTPDSWFANSSLFESARVSLSTEFEDDLELVIQGAKSERLIFEPGETNSILDQSRGGKS 120

Query: 121 EGGKCEESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMN 180
           EGGKCE  +RFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMN
Sbjct: 121 EGGKCESILRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMN 180

Query: 181 GMKNHGYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQRHDRERCDV 227
           GMKNHGYILGAFVDLLVDLGG DGSTDSTSIFSDDLIIQ HDRERC V
Sbjct: 181 GMKNHGYILGAFVDLLVDLGGADGSTDSTSIFSDDLIIQPHDRERCVV 227

[Close]

BLAST of CsGy6G004050.1 vs. NCBI nr
Match: XP_038886353.1 (transcription repressor OFP13-like [Benincasa hispida])

HSP 1 Score: 348 bits (893), Expect = 3.38e-119
Identity = 182/229 (79.48%), Postives = 197/229 (86.03%), Query Frame = 0


Query: 1   MGKKMKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSDP 60
           MG+KMKLLPSLFKNR S DRPWQWP+CG SKTPSFRAG  D +IF+T+NS+F +NF SD 
Sbjct: 1   MGRKMKLLPSLFKNRESMDRPWQWPICGSSKTPSFRAG--DGEIFTTVNSMFLENFLSDQ 60

Query: 61  IHTPDSWFATSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVEE 120
           I TPDSWFA S LF+SAR   ST+FEDDLE+VIRGAKSERLIFEPGETNSILEKSR  E 
Sbjct: 61  IQTPDSWFANSWLFDSAR--FSTDFEDDLEVVIRGAKSERLIFEPGETNSILEKSRIEEA 120

Query: 121 GGKCEESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMNG 180
           G KCE  I  EGSVV L+AMESEDPYLDFRRSMEEMVE HGIR+WEWLE LLNWYLRMN 
Sbjct: 121 GSKCE-PIGLEGSVV-LLAMESEDPYLDFRRSMEEMVESHGIRDWEWLEALLNWYLRMNR 180

Query: 181 MKNHGYILGAFVDLLVDLGGG--DGSTDSTSIFSDDLIIQRHDRERCDV 227
           +KNHGYILGAFVDLLVDLGGG  DGS DSTSIFSD+LI+Q HDRERC V
Sbjct: 181 IKNHGYILGAFVDLLVDLGGGGGDGSMDSTSIFSDELIVQHHDRERCVV 223

[Close]

BLAST of CsGy6G004050.1 vs. NCBI nr
Match: XP_023523415.1 (transcription repressor OFP13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305 bits (781), Expect = 2.50e-102
Identity = 162/214 (75.70%), Postives = 177/214 (82.71%), Query Frame = 0


Query: 5   MKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSDPIHTP 64
           MKLLPS FKNR S DRPWQWP+CG SKTPSFRAG  D +IF T+NS+FFDN  SD I TP
Sbjct: 1   MKLLPSFFKNRESSDRPWQWPICGSSKTPSFRAG--DEEIFKTVNSVFFDNLLSDRIETP 60

Query: 65  DSWFATSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVEEGGKC 124
           DSWFA SSLFESAR   ST+F+DD E+V+RGAKSERLIFEPGETN I++KS    E GKC
Sbjct: 61  DSWFAKSSLFESAR--FSTDFDDDFEVVVRGAKSERLIFEPGETNCIIKKSA---EEGKC 120

Query: 125 EESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMNGMKNH 184
           + SIRFEGSVVV  AMESEDPYLDFRRSMEEMVE  GIR+WE LE LLNWYLR+N +KNH
Sbjct: 121 D-SIRFEGSVVV--AMESEDPYLDFRRSMEEMVESLGIRDWECLEALLNWYLRVNQIKNH 180

Query: 185 GYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQ 218
            YI GAFVDLLVD GG  G TDSTSIFSD+LIIQ
Sbjct: 181 RYIFGAFVDLLVDHGGDGGFTDSTSIFSDELIIQ 204

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BLAST of CsGy6G004050.1 vs. ExPASy TrEMBL
Match: A0A0A0KCG2 (Transcription repressor OS=Cucumis sativus OX=3659 GN=Csa_6G046300 PE=4 SV=1)

HSP 1 Score: 466 bits (1198), Expect = 6.21e-166
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MGKKMKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSDP 60
           MGKKMKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSDP
Sbjct: 1   MGKKMKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSDP 60

Query: 61  IHTPDSWFATSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVEE 120
           IHTPDSWFATSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVEE
Sbjct: 61  IHTPDSWFATSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVEE 120

Query: 121 GGKCEESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMNG 180
           GGKCEESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMNG
Sbjct: 121 GGKCEESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMNG 180

Query: 181 MKNHGYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQRHDRERCDV 227
           MKNHGYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQRHDRERCDV
Sbjct: 181 MKNHGYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQRHDRERCDV 227

[Close]

BLAST of CsGy6G004050.1 vs. ExPASy TrEMBL
Match: A0A5D3CK34 (Transcription repressor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G001090 PE=4 SV=1)

HSP 1 Score: 412 bits (1058), Expect = 1.37e-144
Identity = 206/228 (90.35%), Postives = 212/228 (92.98%), Query Frame = 0


Query: 1   MGKKMKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSDP 60
           MGKKMKLLPSLFKNR SPDRPWQWPLCG SKTPSFRA P  HQIF+TLNS FF NF SDP
Sbjct: 1   MGKKMKLLPSLFKNRQSPDRPWQWPLCGTSKTPSFRA-PHHHQIFTTLNSTFFHNFLSDP 60

Query: 61  IHTPDSWFATSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVE- 120
           IHTPDSWFA SSLFESARVSLSTEFEDDLELVI+GAKSERLIFEPGETNSIL++SRG + 
Sbjct: 61  IHTPDSWFANSSLFESARVSLSTEFEDDLELVIQGAKSERLIFEPGETNSILDQSRGGKS 120

Query: 121 EGGKCEESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMN 180
           EGGKCE  +RFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMN
Sbjct: 121 EGGKCESILRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMN 180

Query: 181 GMKNHGYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQRHDRERCDV 227
           GMKNHGYILGAFVDLLVDLGG DGSTDSTSIFSDDLIIQ HDRERC V
Sbjct: 181 GMKNHGYILGAFVDLLVDLGGADGSTDSTSIFSDDLIIQPHDRERCVV 227

[Close]

BLAST of CsGy6G004050.1 vs. ExPASy TrEMBL
Match: A0A1S3C3N2 (Transcription repressor OS=Cucumis melo OX=3656 GN=LOC103496522 PE=4 SV=1)

HSP 1 Score: 412 bits (1058), Expect = 1.37e-144
Identity = 206/228 (90.35%), Postives = 212/228 (92.98%), Query Frame = 0


Query: 1   MGKKMKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSDP 60
           MGKKMKLLPSLFKNR SPDRPWQWPLCG SKTPSFRA P  HQIF+TLNS FF NF SDP
Sbjct: 1   MGKKMKLLPSLFKNRQSPDRPWQWPLCGTSKTPSFRA-PHHHQIFTTLNSTFFHNFLSDP 60

Query: 61  IHTPDSWFATSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVE- 120
           IHTPDSWFA SSLFESARVSLSTEFEDDLELVI+GAKSERLIFEPGETNSIL++SRG + 
Sbjct: 61  IHTPDSWFANSSLFESARVSLSTEFEDDLELVIQGAKSERLIFEPGETNSILDQSRGGKS 120

Query: 121 EGGKCEESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMN 180
           EGGKCE  +RFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMN
Sbjct: 121 EGGKCESILRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMN 180

Query: 181 GMKNHGYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQRHDRERCDV 227
           GMKNHGYILGAFVDLLVDLGG DGSTDSTSIFSDDLIIQ HDRERC V
Sbjct: 181 GMKNHGYILGAFVDLLVDLGGADGSTDSTSIFSDDLIIQPHDRERCVV 227

[Close]

BLAST of CsGy6G004050.1 vs. ExPASy TrEMBL
Match: A0A6J1HBM8 (Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111461973 PE=4 SV=1)

HSP 1 Score: 303 bits (776), Expect = 6.99e-102
Identity = 161/218 (73.85%), Postives = 178/218 (81.65%), Query Frame = 0


Query: 5   MKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSDPIHTP 64
           MKLLPS FKNR S DRPWQWP+CG SKTPSFRAG  D +IF T+NS+FFDN  SD I TP
Sbjct: 1   MKLLPSFFKNRESSDRPWQWPICGSSKTPSFRAG--DEEIFKTVNSVFFDNLLSDRIETP 60

Query: 65  DSWFATSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVEEGGKC 124
           DSWFA SSLFESAR   ST+F+DD E+V+RGAKSERLIFEPGETN I++KS    + GKC
Sbjct: 61  DSWFAKSSLFESAR--FSTDFDDDFEVVVRGAKSERLIFEPGETNCIIKKSA---DEGKC 120

Query: 125 EESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMNGMKNH 184
           + SIRFEGSVVV  A+ESEDPYLDFRRSMEEMVE  GIR+WE LE LLNWYLR+N +KNH
Sbjct: 121 D-SIRFEGSVVV--AVESEDPYLDFRRSMEEMVESLGIRDWECLEALLNWYLRVNQIKNH 180

Query: 185 GYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQRHDR 222
            YI GAFVDLLVD GG  G TDSTSIFSD+LIIQ   R
Sbjct: 181 RYIFGAFVDLLVDHGGDGGFTDSTSIFSDELIIQNSPR 208

[Close]

BLAST of CsGy6G004050.1 vs. ExPASy TrEMBL
Match: A0A6J1JTC1 (Transcription repressor OS=Cucurbita maxima OX=3661 GN=LOC111487313 PE=4 SV=1)

HSP 1 Score: 300 bits (768), Expect = 1.15e-100
Identity = 159/214 (74.30%), Postives = 177/214 (82.71%), Query Frame = 0


Query: 5   MKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSDPIHTP 64
           MKLLPS FKNR S DRPW+WP+CG SKTPSFRAG  D +IF T+NS+FFDN  SD I TP
Sbjct: 1   MKLLPSFFKNRESSDRPWKWPICGSSKTPSFRAG--DEEIFKTVNSVFFDNLLSDRIETP 60

Query: 65  DSWFATSSLFESARVSLSTEFEDDLELVIRGAKSERLIFEPGETNSILEKSRGVEEGGKC 124
           DSWFA SSLFESAR   ST+F+DD E+V+RGAKSERLIFEPGETN I++KS    E GKC
Sbjct: 61  DSWFAKSSLFESAR--FSTDFDDDFEVVVRGAKSERLIFEPGETNCIIKKSA---EEGKC 120

Query: 125 EESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGIRNWEWLEELLNWYLRMNGMKNH 184
           + SIRFEGSVVV  AMESEDPYLDFRRSMEEMVE  GIR+WE LE LLNW+LR+N +KNH
Sbjct: 121 D-SIRFEGSVVV--AMESEDPYLDFRRSMEEMVESLGIRDWECLEALLNWFLRVNQIKNH 180

Query: 185 GYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQ 218
            YI GAFVDLLV+ GG  G TDSTSIFSD+LIIQ
Sbjct: 181 RYIFGAFVDLLVNHGGDGGFTDSTSIFSDELIIQ 204

[Close]

BLAST of CsGy6G004050.1 vs. TAIR 10
Match: AT5G04820.1 (ovate family protein 13 )

HSP 1 Score: 149.1 bits (375), Expect = 4.4e-36
Identity = 108/237 (45.57%), Postives = 134/237 (56.54%), Query Frame = 0


Query: 1   MGKKMKLLPSLFKNRASPDRPWQWPLCGPSKTPSFRAGPDDHQIFSTLNSIFFDNFFSD- 60
           MGKK   L SLFK  A        PLC  +KT SFR G D   +  T+NS+FFD+  ++ 
Sbjct: 1   MGKKKMKLSSLFKGGAG--GLLAVPLCYNAKTLSFRVGDD---MIKTVNSVFFDHHHNNN 60

Query: 61  ------PIHTPDSWFATSSLFESARVSLSTEFEDD-----LELVIRG-AKSERLIFEPGE 120
                    TP+SWF  SS  E+A  S STE + D     LE+V+RG  +SERL F+PG 
Sbjct: 61  NGGDLLEAETPESWFTNSS--ETA--SHSTESDQDLDAESLEMVVRGVVRSERLFFDPGV 120

Query: 121 TNSILEKSRGVEEGGKC------------EESIRFEGSVVVLMAMESEDPYLDFRRSMEE 180
           T+SILE+   +EE  K             + S   E  + V +AMESEDPY DFRRSMEE
Sbjct: 121 TSSILEE---IEEKSKSDLKSKETVAVGEDRSTPIE-EISVAVAMESEDPYGDFRRSMEE 180

Query: 181 MVECHG--IRNWEWLEELLNWYLRMNGMKNHGYILGAFVDLLVDLGGGDGSTDSTSI 211
           MV  HG   ++WE LE +L WYLRMNG K+HG I+ AFVDLL  L        S S+
Sbjct: 181 MVTSHGELAKDWESLESMLAWYLRMNGRKSHGVIVSAFVDLLSGLSDSGAGITSASV 224

[Close]

BLAST of CsGy6G004050.1 vs. TAIR 10
Match: AT2G36050.1 (ovate family protein 15 )

HSP 1 Score: 108.2 bits (269), Expect = 8.7e-24
Identity = 83/202 (41.09%), Postives = 108/202 (53.47%), Query Frame = 0


Query: 8   LPSLFKNRA-------SPDRPWQWPLCGPS-KTPSFRAGPDDHQIFSTLNSIFFDNFFSD 67
           LP L KN +       S    W WP C  + KT SFRA         T+        F++
Sbjct: 3   LPFLNKNHSTSSYSSNSSSSSWPWPSCNQNPKTLSFRA---------TIT-------FTN 62

Query: 68  PIHTPDSWFATSSLFESARVSLSTEFEDDLELVIRGAK-SERLIFE-PGETNSILEKSRG 127
           PIH  D         +   +    E  D +E VI+G + SERLIFE  GETNSILE    
Sbjct: 63  PIHDQDD--------DELDLLDPPEITDSVENVIKGLRSSERLIFESKGETNSILE---- 122

Query: 128 VEEGGKCEESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGI-RNWEWLEELLNWYL 187
            E   K EE    EG   +L ++ES+DPY DF+RSMEEMVE H +  +W+ LE+LL  +L
Sbjct: 123 -EATSKREEEDEEEG--FMLFSLESDDPYSDFKRSMEEMVEAHALHHDWKSLEKLLLQFL 173

Query: 188 RMNGMKNHGYILGAFVDLLVDL 199
           ++N   +H YI  AFVDLL++L
Sbjct: 183 KVNAKTSHRYIFAAFVDLLMNL 173

[Close]

BLAST of CsGy6G004050.1 vs. TAIR 10
Match: AT3G52540.1 (ovate family protein 18 )

HSP 1 Score: 86.7 bits (213), Expect = 2.7e-17
Identity = 78/236 (33.05%), Postives = 122/236 (51.69%), Query Frame = 0


Query: 1   MGKKMKL--------LPSLFKNRASPDRPWQWPLCGPS--KTPSFRAGPDDHQIFSTLNS 60
           M +KMKL          S   N +S    W WP       KT S +A      I +    
Sbjct: 1   MVRKMKLPFLNKNTSSSSFSSNSSSSSSSWPWPSSHQQNLKTISSKAS----FIVNKPKD 60

Query: 61  IFFD-----NFFSDPIHTPDSWFATSSLFESARVSLSTEFEDDLELVIRGAK-SERLIFE 120
           ++       +F S P  +  S F+++    S  +    E E  +E VI+G K S+RLIFE
Sbjct: 61  VYEPEPPPRSFSSSPSSSSYSSFSST----SHAIENPPEIE-SIENVIKGLKSSKRLIFE 120

Query: 121 -PGETNSILEKSRGVEEGGKCEESIRFEGSVVVLMAMESEDPYLDFRRSMEEMVECHGI- 180
             G +NSILE++   ++  + E+ +       +L+++ES DPY DF+ SME+MVE H + 
Sbjct: 121 RRGTSNSILEEATKRDDHEEEEDGL-------MLLSLESNDPYTDFKNSMEKMVEVHVLH 180

Query: 181 RNWEWLEELLNWYLRMNGMKNHGYILGAFVDLLVDLGGGDGSTDSTSIFSDDLIIQ 219
            +W  LE+LL W+L++N   +H YI  AFVDL+++L  G  S D     + D++++
Sbjct: 181 HDWISLEKLLFWFLKVNVKASHRYIFAAFVDLVLNLAVGP-SKDVAGEPNSDVVVE 219

[Close]

BLAST of CsGy6G004050.1 vs. TAIR 10
Match: AT1G05420.1 (ovate family protein 12 )

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-09
Identity = 51/156 (32.69%), Postives = 73/156 (46.79%), Query Frame = 0


Query: 64  PDSWFATSSLFESARVSLSTEFED---------------DLELVIRGAKSERLIF-EPGE 123
           P S F  S+   +   S S  ++D               DL  V+    S R  F  PG 
Sbjct: 67  PSSTFTASTSTAANSSSSSASYDDSDNYGFAPDDDSPPPDLTAVL---ASRRFFFSSPGC 126

Query: 124 TNSILEKSRGVEEGGKCEESIR-FEGSVVVLMAMESEDPYLDFRRSMEEMVE----CHGI 183
           +NSI + S  +      + + R   G   V   ++S DPY DFRRSM+EM++       +
Sbjct: 127 SNSITD-SPDLRCRDNYDTATRLLTGGTAVKHYVQSPDPYNDFRRSMQEMIDAVTNAGDL 186

Query: 184 RNWEWLEELLNWYLRMNGMKNHGYILGAFVDLLVDL 199
           R +E+L ELL  YL +N    H +I+ AF D+LV L
Sbjct: 187 RRYEFLHELLLSYLSLNAADTHKFIIRAFADILVSL 218

[Close]

BLAST of CsGy6G004050.1 vs. TAIR 10
Match: AT1G79960.1 (ovate family protein 14 )

HSP 1 Score: 55.1 bits (131), Expect = 8.7e-08
Identity = 40/109 (36.70%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 97  KSERLIFEPG--ETNSILEKSRGVEEGGKCEESIRFEGSVVVLMAMESEDPYLDFRRSME 156
           ++ERL   PG  E    +E +    E       +  E  + VL    +++P  DFR+SM 
Sbjct: 154 RTERLSPPPGSSEGRPSMETTSTSSERQSRSTLVLPENCIAVL--RYTDEPQEDFRQSMV 213

Query: 157 EMVECH-GIR----NWEWLEELLNWYLRMNGMKNHGYILGAFVDLLVDL 199
           EM+E   G+R    +W+ +EELL  YL +N  K+H +IL AFVDL++ L
Sbjct: 214 EMMESKLGMRESEVDWDLMEELLFCYLDLNDKKSHKFILSAFVDLIIAL 260

The following BLAST results are available for this feature:

BLAST of CsGy6G004050.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMC8	6.3e-35	45.57	Transcription repressor OFP13 OS=Arabidopsis thaliana OX=3702 GN=OFP13 PE=1 SV=1	[more]
Q9SJ45	1.2e-22	41.09	Transcription repressor OFP15 OS=Arabidopsis thaliana OX=3702 GN=OFP15 PE=1 SV=1	[more]
Q9SVD5	3.8e-16	33.05	Transcription repressor OFP18 OS=Arabidopsis thaliana OX=3702 GN=OFP18 PE=2 SV=1	[more]
F4I8R6	5.0e-08	32.69	Transcription repressor OFP12 OS=Arabidopsis thaliana OX=3702 GN=OFP12 PE=1 SV=1	[more]
Q94CV1	5.0e-08	30.05	Transcription repressor OFP8 OS=Oryza sativa subsp. japonica OX=39947 GN=OFP8 PE...	[more]

BLAST of CsGy6G004050.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46052.1	1.28e-165	100.00	hypothetical protein Csa_005443 [Cucumis sativus]	[more]
XP_004140993.3	1.24e-162	100.00	transcription repressor OFP13 [Cucumis sativus]	[more]
XP_008456619.1	2.83e-144	90.35	PREDICTED: transcription repressor OFP13-like [Cucumis melo] >TYK11780.1 transcr...	[more]
XP_038886353.1	3.38e-119	79.48	transcription repressor OFP13-like [Benincasa hispida]	[more]
XP_023523415.1	2.50e-102	75.70	transcription repressor OFP13-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy6G004050.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCG2	6.21e-166	100.00	Transcription repressor OS=Cucumis sativus OX=3659 GN=Csa_6G046300 PE=4 SV=1	[more]
A0A5D3CK34	1.37e-144	90.35	Transcription repressor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C3N2	1.37e-144	90.35	Transcription repressor OS=Cucumis melo OX=3656 GN=LOC103496522 PE=4 SV=1	[more]
A0A6J1HBM8	6.99e-102	73.85	Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111461973 PE=4 SV=1	[more]
A0A6J1JTC1	1.15e-100	74.30	Transcription repressor OS=Cucurbita maxima OX=3661 GN=LOC111487313 PE=4 SV=1	[more]

BLAST of CsGy6G004050.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04820.1	4.4e-36	45.57	ovate family protein 13	[more]
AT2G36050.1	8.7e-24	41.09	ovate family protein 15	[more]
AT3G52540.1	2.7e-17	33.05	ovate family protein 18	[more]
AT1G05420.1	3.5e-09	32.69	ovate family protein 12	[more]
AT1G79960.1	8.7e-08	36.70	ovate family protein 14	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006458	Ovate protein family, C-terminal	PFAM	PF04844	Ovate	coord: 142..198 e-value: 3.9E-25 score: 87.6
IPR006458	Ovate protein family, C-terminal	TIGRFAM	TIGR01568	TIGR01568	coord: 136..198 e-value: 5.4E-24 score: 82.3
IPR006458	Ovate protein family, C-terminal	PROSITE	PS51754	OVATE	coord: 138..197 score: 17.831968
None	No IPR available	PANTHER	PTHR33057:SF26	TRANSCRIPTION REPRESSOR OFP13	coord: 1..209
IPR038933	Ovate protein family	PANTHER	PTHR33057	TRANSCRIPTION REPRESSOR OFP7-RELATED	coord: 1..209

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy6G004050	CsGy6G004050	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy6G004050.1.utr5p1	CsGy6G004050.1.utr5p1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy6G004050.1.exon1	CsGy6G004050.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy6G004050.1	cds.CsGy6G004050.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy6G004050.1.utr3p1	CsGy6G004050.1.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy6G004050.1	CsGy6G004050.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus