CsGy4G001130.1 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G001130.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	CP12 domain-containing protein
Location	Gy14Chr4: 689723 .. 691791 (-)
Sequence length	2069
RNA-Seq Expression	CsGy4G001130.1
Synteny	CsGy4G001130.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCGTTTAAAAAAAAAAGAAAAAAAAATTATTAGACGTGTTTCAAACTAGTGTATGCACTAATGGTTAGGTTAACCGTGGCTTAACTTGAACAATCCTCAAGATCTTCTTATGAGTTCATAGTTTAACATTTATGTGATAGTTTTATACCATCCAAACTTGATATTTAATTTTTGTGGCTCTTATCTATGTTTAGTTTTTCTTATTCTCTTTTAACTTGTAGTAACCAAATGAAAAGCCATTTGCAAATCAAGACAAATGCAGCTGCAAGATATATTAGCCAATCTCTTGATATTTTTATGCTCTATGAGACAATATATTCTGCCATTTGCCCATCAAATGGCCATAATTTCTCAAGATTTTTCCATTTCAACTTTGTTTCAATCTTCTACTCTTTTTGTTTGTTTTCCTTTTTTCAATTTTTTGGACCTTTGATGAAATATCTTCATAACTCCTATGACGTGGGCATCATCCATTGGTTGTCATTTGATAAGAAGTATGTGTCAATGGCACAATTCCCATTCCATTTATATATTATATAGTTCCTAAAGCCATATCCCCATGATTTATATCCTCCTTCAAGCTCACAGTTGAACTCTAACATTACTTCTTCCCTACACAAAGATATGGCTACCATTTCTGGGGTGAACCTCTCAAGTCCAAGAATCATGGCCAAGGCAGCTAAGACACCTAAAGTACAGCTTCTCAATGTTGGGTGGCTCCGCTGCTCGTGGAAGCAATCGGCCCAACTTGGAGCCATAAGGTTGAGAGTTCCACCGGTTCACGCTGCACCGGATAAGATATCAGATAAGGTAGAAGAGAGCATAAAAAATGCAGAGGAGGCTTGTGCAGGTGACCCCGTGAGTGGGGAGTGTGCTGCAGCATGGGACGAAGTTGAGGAATTAAGCGCAGCAGCAAGCCATGCTCGTGACAGAAAGAAGGAATCTGATCCATTGGAAAGCTACTGCAAGGACAACCCAGAGACTGAGGAATGTCGCACCTACGACAATTGAGTAATGAAATGATATTAAGTTTTAGGTATTTTATTTCATCTACATATTGATTTGAATTAAAGTTATTGGACGACACGTTGTTGTATAACTTTTTTAAGTTGTTAATTTTACAGAAGTTGCATGAATATGGTCATAAACTTGTCTTAGTTAAAAGCTTTTGATATTATCTACATATTAATCAAATTAAAATATTATAGATTAATCTCAAGAAATTCTTAGATAAGTGTTCATGAGGTCAAAGTCTTGTCTCCCTTTAAGGAGGTTCATTACTTTTGGTAATTTTTTGCTTGTGAATTGCCTATCAAGTGCAAAGTGGGAACCTAGGGAATTATAAAGGATGAATTTATTTCTTCATCTACAGATAGACAAGATTCACTTTTCAGTTAATTTAAATTATGTTTCATGGTTTATGAATCTAAAAATCAACAAAAACCATCCCAATACTTCTATACATACATATATACATACATATATATATAGAAGGGTAGTAGGGGTTTGAGTTTAAACTTTCACTTTGGATCAACTTAAGGGTGTTAGACCAAAGAGTAAGAGTAGAAGTTGAGAAATATGAAGCTGGAAACATTACCATTAGTTTGACCCAAAAGTTTATGGATGCCACTATTAAAGCTTATCGTTAACTCTTTAAGACTTCACAATTTCTTAAGGTTCATTATTCCAACTGGCAATTGCATATCTAGAGTAGAATACATCTCATGCACTAACCCACTCTTGAGGTATTTGATTCCAAAACAATTTTTGGCATCCTCATCTATTTAAGTATAATAAAAATTAAATAAATTATTTTTGAAAAAAAACCTCATTCATATGGTGTAAGGTTTGCATATTGAGAGTAGCCTGTCATGAGTGTAACCACCCTTATTTTTCAAGGTCACTCTTTGATGTGATTGTTAAAACAAAACGATCCCTTGTTTATTTGTAAAATTTTTTATTTTCAAAAATTAAGTTTTTCTTATTCTTTTCATTTTTTCACTTTCCGTGGATATTTTTGTAAACTAAAAATGAAGGATAGTTTTCAACTTGTTTGGTTATTCAAAA

mRNA sequence

AACCGTTTAAAAAAAAAAGAAAAAAAAATTATTAGACGTGTTTCAAACTAGTGTATGCACTAATGGTTAGGTTAACCGTGGCTTAACTTGAACAATCCTCAAGATCTTCTTATGAGTTCATAGTTTAACATTTATGTGATAGTTTTATACCATCCAAACTTGATATTTAATTTTTGTGGCTCTTATCTATGTTTAGTTTTTCTTATTCTCTTTTAACTTGTAGTAACCAAATGAAAAGCCATTTGCAAATCAAGACAAATGCAGCTGCAAGATATATTAGCCAATCTCTTGATATTTTTATGCTCTATGAGACAATATATTCTGCCATTTGCCCATCAAATGGCCATAATTTCTCAAGATTTTTCCATTTCAACTTTGTTTCAATCTTCTACTCTTTTTGTTTGTTTTCCTTTTTTCAATTTTTTGGACCTTTGATGAAATATCTTCATAACTCCTATGACGTGGGCATCATCCATTGGTTGTCATTTGATAAGAAGTATGTGTCAATGGCACAATTCCCATTCCATTTATATATTATATAGTTCCTAAAGCCATATCCCCATGATTTATATCCTCCTTCAAGCTCACAGTTGAACTCTAACATTACTTCTTCCCTACACAAAGATATGGCTACCATTTCTGGGGTGAACCTCTCAAGTCCAAGAATCATGGCCAAGGCAGCTAAGACACCTAAAGTACAGCTTCTCAATGTTGGGTGGCTCCGCTGCTCGTGGAAGCAATCGGCCCAACTTGGAGCCATAAGGTTGAGAGTTCCACCGGTTCACGCTGCACCGGATAAGATATCAGATAAGGTAGAAGAGAGCATAAAAAATGCAGAGGAGGCTTGTGCAGGTGACCCCGTGAGTGGGGAGTGTGCTGCAGCATGGGACGAAGTTGAGGAATTAAGCGCAGCAGCAAGCCATGCTCGTGACAGAAAGAAGGAATCTGATCCATTGGAAAGCTACTGCAAGGACAACCCAGAGACTGAGGAATGTCGCACCTACGACAATTGAGTAATGAAATGATATTAAGTTTTAGGTATTTTATTTCATCTACATATTGATTTGAATTAAAGTTATTGGACGACACGTTGTTGTATAACTTTTTTAAGTTGTTAATTTTACAGAAGTTGCATGAATATGGTCATAAACTTGTCTTAGTTAAAAGCTTTTGATATTATCTACATATTAATCAAATTAAAATATTATAGATTAATCTCAAGAAATTCTTAGATAAGTGTTCATGAGGTCAAAGTCTTGTCTCCCTTTAAGGAGGTTCATTACTTTTGGTAATTTTTTGCTTGTGAATTGCCTATCAAGTGCAAAGTGGGAACCTAGGGAATTATAAAGGATGAATTTATTTCTTCATCTACAGATAGACAAGATTCACTTTTCAGTTAATTTAAATTATGTTTCATGGTTTATGAATCTAAAAATCAACAAAAACCATCCCAATACTTCTATACATACATATATACATACATATATATATAGAAGGGTAGTAGGGGTTTGAGTTTAAACTTTCACTTTGGATCAACTTAAGGGTGTTAGACCAAAGAGTAAGAGTAGAAGTTGAGAAATATGAAGCTGGAAACATTACCATTAGTTTGACCCAAAAGTTTATGGATGCCACTATTAAAGCTTATCGTTAACTCTTTAAGACTTCACAATTTCTTAAGGTTCATTATTCCAACTGGCAATTGCATATCTAGAGTAGAATACATCTCATGCACTAACCCACTCTTGAGGTATTTGATTCCAAAACAATTTTTGGCATCCTCATCTATTTAAGTATAATAAAAATTAAATAAATTATTTTTGAAAAAAAACCTCATTCATATGGTGTAAGGTTTGCATATTGAGAGTAGCCTGTCATGAGTGTAACCACCCTTATTTTTCAAGGTCACTCTTTGATGTGATTGTTAAAACAAAACGATCCCTTGTTTATTTGTAAAATTTTTTATTTTCAAAAATTAAGTTTTTCTTATTCTTTTCATTTTTTCACTTTCCGTGGATATTTTTGTAAACTAAAAATGAAGGATAGTTTTCAACTTGTTTGGTTATTCAAAA

Coding sequence (CDS)

ATGGCTACCATTTCTGGGGTGAACCTCTCAAGTCCAAGAATCATGGCCAAGGCAGCTAAGACACCTAAAGTACAGCTTCTCAATGTTGGGTGGCTCCGCTGCTCGTGGAAGCAATCGGCCCAACTTGGAGCCATAAGGTTGAGAGTTCCACCGGTTCACGCTGCACCGGATAAGATATCAGATAAGGTAGAAGAGAGCATAAAAAATGCAGAGGAGGCTTGTGCAGGTGACCCCGTGAGTGGGGAGTGTGCTGCAGCATGGGACGAAGTTGAGGAATTAAGCGCAGCAGCAAGCCATGCTCGTGACAGAAAGAAGGAATCTGATCCATTGGAAAGCTACTGCAAGGACAACCCAGAGACTGAGGAATGTCGCACCTACGACAATTGA

Protein sequence

MATISGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPDKISDKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLESYCKDNPETEECRTYDN*

Homology

[Close]

BLAST of CsGy4G001130.1 vs. ExPASy Swiss-Prot
Match: Q9LZP9 (Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-2 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 9.0e-31
Identity = 77/132 (58.33%), Postives = 94/132 (71.21%), Query Frame = 0


Query: 1   MATI-SGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPD-K 60
           MATI +G+N+++ R+   +   P V L     L  SW   ++     +++ P+ AAP+  
Sbjct: 1   MATIATGLNIATQRVFVTSENRP-VCLAGPVHLNNSWNLGSRTTNRMMKLQPIKAAPEGG 60

Query: 61  ISDKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKE--SDPLESYCKD 120
           ISD VE+SIK A+E CAGDPVSGEC AAWDEVEELSAAASHARD+KK   SDPLE YCKD
Sbjct: 61  ISDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHARDKKKADGSDPLEEYCKD 120

Query: 121 NPETEECRTYDN 129
           NPET ECRTYDN
Sbjct: 121 NPETNECRTYDN 131

[Close]

BLAST of CsGy4G001130.1 vs. ExPASy Swiss-Prot
Match: O22914 (Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-1 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-27
Identity = 71/132 (53.79%), Postives = 92/132 (69.70%), Query Frame = 0


Query: 1   MATI--SGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPDK 60
           M TI  +G+N+++PR++ +    P  ++L    L   WK     G+++  V     +  +
Sbjct: 1   MTTIAAAGLNVATPRVVVR----PVARVLGPVRLNYPWK----FGSMKRMVVVKATSEGE 60

Query: 61  ISDKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKE--SDPLESYCKD 120
           IS+KVE+SI+ A+E CA DPVSGEC AAWDEVEELSAAASHARD+KK   SDPLE YC D
Sbjct: 61  ISEKVEKSIQEAKETCADDPVSGECVAAWDEVEELSAAASHARDKKKAGGSDPLEEYCND 120

Query: 121 NPETEECRTYDN 129
           NPET+ECRTYDN
Sbjct: 121 NPETDECRTYDN 124

[Close]

BLAST of CsGy4G001130.1 vs. ExPASy Swiss-Prot
Match: Q9C9K2 (Calvin cycle protein CP12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-3 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.5e-13
Identity = 36/74 (48.65%), Postives = 52/74 (70.27%), Query Frame = 0


Query: 57  DKISDKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKK--ESDPLESYC 116
           +K+S+ +EE +K A E C  + +S EC  AWDEVEE+S A +  R + K    DPLES+C
Sbjct: 61  EKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESFC 120

Query: 117 KDNPETEECRTYDN 129
           ++NPET+ECR Y++
Sbjct: 121 QENPETDECRIYED 134

[Close]

BLAST of CsGy4G001130.1 vs. ExPASy Swiss-Prot
Match: A6Q0K5 (Calvin cycle protein CP12, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=CP12 PE=1 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 3.2e-12
Identity = 37/74 (50.00%), Postives = 53/74 (71.62%), Query Frame = 0


Query: 59  ISDKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKE----SDPLESYC 118
           ++ KV++++K AE+ACA    S +CA AWD VEELSAA SH +D  K     +DPLE++C
Sbjct: 35  LNKKVQDAVKEAEDACA-KGTSADCAVAWDTVEELSAAVSHKKDAVKADVTLTDPLEAFC 94

Query: 119 KDNPETEECRTYDN 129
           KD P+ +ECR Y++
Sbjct: 95  KDAPDADECRVYED 107

[Close]

BLAST of CsGy4G001130.1 vs. NCBI nr
Match: XP_004152225.1 (calvin cycle protein CP12-2, chloroplastic [Cucumis sativus] >KGN52853.1 hypothetical protein Csa_014965 [Cucumis sativus])

HSP 1 Score: 256 bits (653), Expect = 8.97e-86
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MATISGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPDKIS 60
           MATISGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPDKIS
Sbjct: 1   MATISGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPDKIS 60

Query: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLESYCKDNPET 120
           DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLESYCKDNPET
Sbjct: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLESYCKDNPET 120

Query: 121 EECRTYDN 128
           EECRTYDN
Sbjct: 121 EECRTYDN 128

[Close]

BLAST of CsGy4G001130.1 vs. NCBI nr
Match: XP_008454293.1 (PREDICTED: calvin cycle protein CP12-2, chloroplastic [Cucumis melo] >KAA0044414.1 calvin cycle protein CP12-2 [Cucumis melo var. makuwa] >TYK29541.1 calvin cycle protein CP12-2 [Cucumis melo var. makuwa])

HSP 1 Score: 246 bits (627), Expect = 8.30e-82
Identity = 121/128 (94.53%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MATISGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPDKIS 60
           MATISGVN+SSPRI+AKAA+TPKVQ LNVGWLRCSWKQSA++GAIRLRVPPVHAAPDKIS
Sbjct: 1   MATISGVNISSPRILAKAAQTPKVQPLNVGWLRCSWKQSARVGAIRLRVPPVHAAPDKIS 60

Query: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLESYCKDNPET 120
           DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLE+YCKDNPET
Sbjct: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLENYCKDNPET 120

Query: 121 EECRTYDN 128
           EECRTYDN
Sbjct: 121 EECRTYDN 128

[Close]

BLAST of CsGy4G001130.1 vs. NCBI nr
Match: XP_038903303.1 (calvin cycle protein CP12-1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 237 bits (604), Expect = 5.56e-78
Identity = 118/128 (92.19%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MATISGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPDKIS 60
           MATI GVNLSSPRI+ KAAKTPKVQ LNVG LRCSWKQS + GA+RLRVPPVHAAPDKIS
Sbjct: 23  MATIYGVNLSSPRILPKAAKTPKVQALNVGSLRCSWKQSTRFGAVRLRVPPVHAAPDKIS 82

Query: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLESYCKDNPET 120
           DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLE+YCKDNPET
Sbjct: 83  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLENYCKDNPET 142

Query: 121 EECRTYDN 128
           EECRTYDN
Sbjct: 143 EECRTYDN 150

[Close]

BLAST of CsGy4G001130.1 vs. NCBI nr
Match: XP_022155326.1 (calvin cycle protein CP12-2, chloroplastic-like [Momordica charantia])

HSP 1 Score: 229 bits (583), Expect = 4.26e-75
Identity = 114/128 (89.06%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 1   MATISGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPDKIS 60
           MATISGVNLSSPRI+AKAA+TPKVQ LN GWL   W+QS +  AIRLRVPPVHAAPDKIS
Sbjct: 1   MATISGVNLSSPRILAKAAETPKVQALNGGWLHRPWRQSGRFTAIRLRVPPVHAAPDKIS 60

Query: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLESYCKDNPET 120
           DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARD+KKESDPLE+YCKDNPET
Sbjct: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDKKKESDPLENYCKDNPET 120

Query: 121 EECRTYDN 128
           EECRTYDN
Sbjct: 121 EECRTYDN 128

[Close]

BLAST of CsGy4G001130.1 vs. NCBI nr
Match: XP_022934393.1 (calvin cycle protein CP12-2, chloroplastic-like [Cucurbita moschata] >XP_022984077.1 calvin cycle protein CP12-2, chloroplastic-like [Cucurbita maxima] >KAG6581299.1 Calvin cycle protein CP12-2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018019.1 Calvin cycle protein CP12-2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226 bits (576), Expect = 4.98e-74
Identity = 114/128 (89.06%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 1   MATISGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPDKIS 60
           MATISGVNLSSPRI+AKA + PK Q  NVG+LR SWKQS Q  AIRLRVPPVHAAPDKIS
Sbjct: 1   MATISGVNLSSPRILAKAVEIPKPQSFNVGFLRRSWKQSTQFRAIRLRVPPVHAAPDKIS 60

Query: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLESYCKDNPET 120
           DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARD+KKESDPLE+YCKDNPET
Sbjct: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDKKKESDPLETYCKDNPET 120

Query: 121 EECRTYDN 128
           EECRTYDN
Sbjct: 121 EECRTYDN 128

[Close]

BLAST of CsGy4G001130.1 vs. ExPASy TrEMBL
Match: A0A0A0KTG0 (Chloroplast protein 12 OS=Cucumis sativus OX=3659 GN=Csa_4G003670 PE=4 SV=1)

HSP 1 Score: 256 bits (653), Expect = 4.34e-86
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MATISGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPDKIS 60
           MATISGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPDKIS
Sbjct: 1   MATISGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPDKIS 60

Query: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLESYCKDNPET 120
           DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLESYCKDNPET
Sbjct: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLESYCKDNPET 120

Query: 121 EECRTYDN 128
           EECRTYDN
Sbjct: 121 EECRTYDN 128

[Close]

BLAST of CsGy4G001130.1 vs. ExPASy TrEMBL
Match: A0A5D3E1R4 (Calvin cycle protein CP12-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001450 PE=4 SV=1)

HSP 1 Score: 246 bits (627), Expect = 4.02e-82
Identity = 121/128 (94.53%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MATISGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPDKIS 60
           MATISGVN+SSPRI+AKAA+TPKVQ LNVGWLRCSWKQSA++GAIRLRVPPVHAAPDKIS
Sbjct: 1   MATISGVNISSPRILAKAAQTPKVQPLNVGWLRCSWKQSARVGAIRLRVPPVHAAPDKIS 60

Query: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLESYCKDNPET 120
           DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLE+YCKDNPET
Sbjct: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLENYCKDNPET 120

Query: 121 EECRTYDN 128
           EECRTYDN
Sbjct: 121 EECRTYDN 128

[Close]

BLAST of CsGy4G001130.1 vs. ExPASy TrEMBL
Match: A0A1S3BZH5 (calvin cycle protein CP12-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494733 PE=4 SV=1)

HSP 1 Score: 246 bits (627), Expect = 4.02e-82
Identity = 121/128 (94.53%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MATISGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPDKIS 60
           MATISGVN+SSPRI+AKAA+TPKVQ LNVGWLRCSWKQSA++GAIRLRVPPVHAAPDKIS
Sbjct: 1   MATISGVNISSPRILAKAAQTPKVQPLNVGWLRCSWKQSARVGAIRLRVPPVHAAPDKIS 60

Query: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLESYCKDNPET 120
           DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLE+YCKDNPET
Sbjct: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLENYCKDNPET 120

Query: 121 EECRTYDN 128
           EECRTYDN
Sbjct: 121 EECRTYDN 128

[Close]

BLAST of CsGy4G001130.1 vs. ExPASy TrEMBL
Match: A0A6J1DRE1 (calvin cycle protein CP12-2, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111022459 PE=4 SV=1)

HSP 1 Score: 229 bits (583), Expect = 2.06e-75
Identity = 114/128 (89.06%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 1   MATISGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPDKIS 60
           MATISGVNLSSPRI+AKAA+TPKVQ LN GWL   W+QS +  AIRLRVPPVHAAPDKIS
Sbjct: 1   MATISGVNLSSPRILAKAAETPKVQALNGGWLHRPWRQSGRFTAIRLRVPPVHAAPDKIS 60

Query: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLESYCKDNPET 120
           DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARD+KKESDPLE+YCKDNPET
Sbjct: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDKKKESDPLENYCKDNPET 120

Query: 121 EECRTYDN 128
           EECRTYDN
Sbjct: 121 EECRTYDN 128

[Close]

BLAST of CsGy4G001130.1 vs. ExPASy TrEMBL
Match: A0A6J1J155 (calvin cycle protein CP12-2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482497 PE=4 SV=1)

HSP 1 Score: 226 bits (576), Expect = 2.41e-74
Identity = 114/128 (89.06%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 1   MATISGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPDKIS 60
           MATISGVNLSSPRI+AKA + PK Q  NVG+LR SWKQS Q  AIRLRVPPVHAAPDKIS
Sbjct: 1   MATISGVNLSSPRILAKAVEIPKPQSFNVGFLRRSWKQSTQFRAIRLRVPPVHAAPDKIS 60

Query: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKESDPLESYCKDNPET 120
           DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARD+KKESDPLE+YCKDNPET
Sbjct: 61  DKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDKKKESDPLETYCKDNPET 120

Query: 121 EECRTYDN 128
           EECRTYDN
Sbjct: 121 EECRTYDN 128

[Close]

BLAST of CsGy4G001130.1 vs. TAIR 10
Match: AT3G62410.1 (CP12 domain-containing protein 2 )

HSP 1 Score: 134.4 bits (337), Expect = 6.4e-32
Identity = 77/132 (58.33%), Postives = 94/132 (71.21%), Query Frame = 0


Query: 1   MATI-SGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPD-K 60
           MATI +G+N+++ R+   +   P V L     L  SW   ++     +++ P+ AAP+  
Sbjct: 1   MATIATGLNIATQRVFVTSENRP-VCLAGPVHLNNSWNLGSRTTNRMMKLQPIKAAPEGG 60

Query: 61  ISDKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKE--SDPLESYCKD 120
           ISD VE+SIK A+E CAGDPVSGEC AAWDEVEELSAAASHARD+KK   SDPLE YCKD
Sbjct: 61  ISDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHARDKKKADGSDPLEEYCKD 120

Query: 121 NPETEECRTYDN 129
           NPET ECRTYDN
Sbjct: 121 NPETNECRTYDN 131

[Close]

BLAST of CsGy4G001130.1 vs. TAIR 10
Match: AT2G47400.1 (CP12 domain-containing protein 1 )

HSP 1 Score: 124.0 bits (310), Expect = 8.7e-29
Identity = 71/132 (53.79%), Postives = 92/132 (69.70%), Query Frame = 0


Query: 1   MATI--SGVNLSSPRIMAKAAKTPKVQLLNVGWLRCSWKQSAQLGAIRLRVPPVHAAPDK 60
           M TI  +G+N+++PR++ +    P  ++L    L   WK     G+++  V     +  +
Sbjct: 1   MTTIAAAGLNVATPRVVVR----PVARVLGPVRLNYPWK----FGSMKRMVVVKATSEGE 60

Query: 61  ISDKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKKE--SDPLESYCKD 120
           IS+KVE+SI+ A+E CA DPVSGEC AAWDEVEELSAAASHARD+KK   SDPLE YC D
Sbjct: 61  ISEKVEKSIQEAKETCADDPVSGECVAAWDEVEELSAAASHARDKKKAGGSDPLEEYCND 120

Query: 121 NPETEECRTYDN 129
           NPET+ECRTYDN
Sbjct: 121 NPETDECRTYDN 124

[Close]

BLAST of CsGy4G001130.1 vs. TAIR 10
Match: AT1G76560.1 (CP12 domain-containing protein 3 )

HSP 1 Score: 75.1 bits (183), Expect = 4.6e-14
Identity = 36/74 (48.65%), Postives = 52/74 (70.27%), Query Frame = 0


Query: 57  DKISDKVEESIKNAEEACAGDPVSGECAAAWDEVEELSAAASHARDRKK--ESDPLESYC 116
           +K+S+ +EE +K A E C  + +S EC  AWDEVEE+S A +  R + K    DPLES+C
Sbjct: 61  EKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESFC 120

Query: 117 KDNPETEECRTYDN 129
           ++NPET+ECR Y++
Sbjct: 121 QENPETDECRIYED 134

The following BLAST results are available for this feature:

BLAST of CsGy4G001130.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZP9	9.0e-31	58.33	Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP...	[more]
O22914	1.2e-27	53.79	Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP...	[more]
Q9C9K2	6.5e-13	48.65	Calvin cycle protein CP12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP...	[more]
A6Q0K5	3.2e-12	50.00	Calvin cycle protein CP12, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN...	[more]

BLAST of CsGy4G001130.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152225.1	8.97e-86	100.00	calvin cycle protein CP12-2, chloroplastic [Cucumis sativus] >KGN52853.1 hypothe...	[more]
XP_008454293.1	8.30e-82	94.53	PREDICTED: calvin cycle protein CP12-2, chloroplastic [Cucumis melo] >KAA0044414...	[more]
XP_038903303.1	5.56e-78	92.19	calvin cycle protein CP12-1, chloroplastic-like [Benincasa hispida]	[more]
XP_022155326.1	4.26e-75	89.06	calvin cycle protein CP12-2, chloroplastic-like [Momordica charantia]	[more]
XP_022934393.1	4.98e-74	89.06	calvin cycle protein CP12-2, chloroplastic-like [Cucurbita moschata] >XP_0229840...	[more]

BLAST of CsGy4G001130.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTG0	4.34e-86	100.00	Chloroplast protein 12 OS=Cucumis sativus OX=3659 GN=Csa_4G003670 PE=4 SV=1	[more]
A0A5D3E1R4	4.02e-82	94.53	Calvin cycle protein CP12-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BZH5	4.02e-82	94.53	calvin cycle protein CP12-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1034947...	[more]
A0A6J1DRE1	2.06e-75	89.06	calvin cycle protein CP12-2, chloroplastic-like OS=Momordica charantia OX=3673 G...	[more]
A0A6J1J155	2.41e-74	89.06	calvin cycle protein CP12-2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CsGy4G001130.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62410.1	6.4e-32	58.33	CP12 domain-containing protein 2	[more]
AT2G47400.1	8.7e-29	53.79	CP12 domain-containing protein 1	[more]
AT1G76560.1	4.6e-14	48.65	CP12 domain-containing protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003823	Domain of unknown function CP12	SMART	SM01093	CP12_2	coord: 59..128 e-value: 1.9E-29 score: 113.8
IPR003823	Domain of unknown function CP12	PFAM	PF02672	CP12	coord: 59..127 e-value: 3.7E-28 score: 98.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..128
None	No IPR available	PANTHER	PTHR33921:SF15	CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC	coord: 1..128
IPR039314	Calvin cycle protein CP12-like	PANTHER	PTHR33921	CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC	coord: 1..128

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy4G001130	CsGy4G001130	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy4G001130.1.exon1	CsGy4G001130.1.exon1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy4G001130.1.utr3p1	CsGy4G001130.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy4G001130.1	cds.CsGy4G001130.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy4G001130.1.utr5p1	CsGy4G001130.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy4G001130.1	CsGy4G001130.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080153	negative regulation of reductive pentose-phosphate cycle
cellular_component	GO:0009507	chloroplast