CsGy4G000090.2 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G000090.2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Tubulin alpha chain
Location	Gy14Chr4: 58376 .. 63825 (+)
Sequence length	1173
RNA-Seq Expression	CsGy4G000090.2
Synteny	CsGy4G000090.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTTAGTATTTGAACCTCATATGTTGGCTATAATGCGCACCGACAGATGCGTATACGCTTTAATCGTCGCCTCCTGTCCTGGCCTCCGCTTGCGTTTCATTTTGTTTTTGCTCTCTTTTGTGGAAAAATTAAGATGAAACTATTTCTCCCATTCAATTCTGCTATCTAACTAATCTATGGCTGCTCTTCAAATTCTCAAATCATCTCTCTCTCTTCCTTCCATCTCGCACTCGAATTTTGGCTCTCAATCAACACGCTTCGTCTCTGACTTTGATTCCCTACTCCTTCATGGACGTCGGAGGAGTTTGCGTTATGCCTGCGTTTATAGAAGGTTCACTTTCCGTTGCGCTGCTAAAGATACTGATAAGGAAACCAATGGCAAGTTTTAACTGCTTTTCTTCTGCTTCGTTTCTACCGGTTTTCTTTTTCCATTGCACCTGCTTTGCTTGTATTTTCTTTGGTGATTGACTGTTCGTTTTTTCGTTGTTTTTGTTTTGCTAAACTACGAAGTTGCATGATGTAGTTTGTTGTTCAGATGCTCCGTCGCTTCTGAATTATCTCGCTCAGTTGAAAGTAGCTCAATCATGTAGCAAAATCGTGCGAGTATTCATCAAGCTATTTGAGTAAATGAGGAGTGGAAGATAGTTGAGGCTATGAATAAAGGTTGCTTCGTTGGCACTCTAATTCTCATTAGAGCTTTATTCTTGAATCAATATAGACACGATTCGATAGATGGATTAAACCGGAATCTGAAATTTTAAACTAAGAATTTTTTTACGTTCAACGATTTTTTAAAAAACTTAAGAGATGGCGAATCTAAGAGTTTTGTTAATCAGACAGAGGAAGCTTGGTAAACGGATGAAATTTTCATTTCGATCAATGTCTGTATTAACCATCACTTGATTCTATAATCCGAAGTCTTCCTTGGTTCAATTTTTGTAGTCAAAGCTTTTAGGAAGCTTCAAGTATGTGTCGAGCCGACAGTTGTAGTACCCGTACTTGTATTAGGAGTCGTAGCTGGCGATGCTTGTTTAGATTGCTTGAACAGTTTTCGCATAGGTTCAGTTTTTCTTTTAAGAAGTGTTTCGGACATTTGAGTTTTCTTCAGCTTGTGTAACAGCGGCATGGTTTGCTTGGCCCTCCTGTGTGGAGGCTCATGAGGCCTTCAAGCTTACTCTCATGAATTTACCTAGCCGGTCTCCTTTGTGCATATACCATCTTCCTACCATGTTCACATCTGGATTTTCTCTCTCTTGGTCCATTGTAGAAGAATGCGTACATATTAGAGCAGACCTTTTTGCGTTCACCTGTAGATGTTCCAAGCAAGTTTTTAACTGTCTCAGTAGTGATATCTCCAGTGGTAAGTCTTGGTGATTGGAGTTTTCACATTCCTCATTAGGAACCTGAAGATTCTCTTTTGTTGATTATTGTCTTATACTTTCTTTACGCAAGTCATACGTTCCCATTCATGCATTTCATATAAATGAAGTCTTCCATGCCGCAAGTAGCATACAAGAAAACTGTAATGTCTAGTTAGGGACCGGTTAAAACAAAAACCAACTTCTCAATGACATAATGAAAAGATAAAACATCTAGGAGATACAAACTCTCACAATGAGAGGAAAAAGAAAAAAGAAAGGTAAGGATCTGCAAATACAACCAAAAAGGATAAACTTCCGAAACAAAAGAAAGTACAAAACTACCGAAGAAACCCAGAAAACGACCACCAACCAACAGAAGACTAACAAAGAGCAAACTGAAAACTCCTTAAACGATTTACACACTAAAAATCCAATGAAAGAAGCGTTTGATGAACCAATACCAAGAATCTTAAAAAGAAATCTTCTCCTAATGCTCTAAAAAATTCCATCAGGAGAATGAAACAAAGCCCAACAAGTAATATTAACCTGCCAAAGCGAAAACTTCAGAAACAGCGAACAAGAAACCGTCTTCCCTTTATAAAGCAATTCAAAAGAAAGTACACCCACGATCTCTAGCAATCAAAGCAAAAATTCAACTCTTATTGACAAACAAGTTGCCTCAGCTCCTTAGAACTTTACAAGAGGGGAAAGAGGGTGAATTTCTTTGAGTTGTAAACCACAAGCTTCAATTAAATATGAAAACCTTTTAGGAACTAAGGAAGGAAATATAACTGGTGAAAAAGGTTGAGAAGCCCTTATCAAATTATCTTGGACATAATTCATCTCAAAAGCATCAGCAAATGAACCCACAAGCTAAGCATCTTCAAACACTCTTTGTGCTTTCCAAGGTTGAACAAAGCAAGGAAAAGCAACTTAAATCATTCTCCACATCAAGAAACTAGGTTATGGAGAATGATTTTAATTTTGAAGGACTCTTTGTGTTTTCCAAGGTTAGAGAAGGTTGCTTTCTCTACACCTATGACTCTGCGGATGCCTGGTATGATAGAAATTTTCTGGTGATCTTATTTGTCATCAAGTTGACCAACCATACTATGACTGTATTATTGGCTGCTTCCCATCCTTCGTATTCAGTCTAACCATATAATTGGTTTTCTCATTTAGTTTGTGAGTATTGATGGATATGCAGCACCTTCAGAACCATCAGAACCATCAGAACCATCAGAACCATGTGTATGTGTATGGTTGAATGTTTCTTTTGTAACCGGGAGTGGAAGCTGCGCTCATACACTGGGACACCTGTACCTGACCCAAGGACTGGAGTTGATTGTAGTGAATAATGTATTTTGCATGAGATGAATTATGTCAATAAAGTTTCTTTGCATTACTTTCTGCAGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAACAGCAGTGACTTTGAACTTGGTGGCGAGATGACTGGAGAAAACAGAGATTTCTCCCGTAGAAGTGCTGTTTCAACGGAAGTTAACAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGTCAATTTCCTTATGATTTTATTGAGATCTAGTGAATATGCTATTCAAATGTCTAAATTCATTTCATCTGATCTGTTTCATTTATTACTCTTACCTTGTTTGACGAGTTCTGACCAAAATAACCATAATTTGATGACTAGTTAATGAAATTATTATTATATTCCACCATGAATATTGAAAGACTGGCTGGACATGCAAAATGAAAATCACAAATAATGGGTCTACAAAAAATATCAAATGTTGGCTCCAAACGTTGAGAACCATCCAAAAGAAATGGACGGCCAAAAAAGCCTAAACGAAAAATTTATAGTGAGCCAAGTTTCACGCATCCTTCCATGACCTCTCTGCTAGTCTTCCCCACAAAATTCCTCGTGTTCCTTTCCAACTAAATACACCAAATAACAAAACAAAATAAAATAAAAATTGCCTCCCGAGGAACCTTCCCATTGTTACAGAAAGGAGGATGAAAACTAATTTCCTCCGCACATCCCTAAGTCTAAGTGTGTGATCAGAAATGAAAAGCATACTCCAGTCCATCATGGACGATGAATTCTCTTCCTGAAAAAGGCACCTTTTATCAACAGATGCCAAAGAAGGAAACCAATCTACCCAAACAAACAACCATTCTGAACTCTTGGAGAACCTCAGCAAAACAAAAGTTGCCTTTCTCAACCACAAACTTCCCTCCATTCATAAAGCCCAATTCGAAAGACTTACTTTCTATTGGAAAACGCCACCAAACACGTAGGCAGTGATAATCAAAGAAGAAAGTGCCAGACTTCTTCCTCCCGAAAAAAAAAAAAAAAAAAAACTAGCAGCTTTCTAACAGTAACTGTAACTTCGGCACGCCAAAGCCTAATAATTGGAACCAATAATTCTGTTGAATCTTAGCAAGCAAGAGTGGGTTATGGAGTATCCAATGTCCATTCAGCAGAAAACACCAATAAATTTAAGTATATAAATGCTCTAAAACTCCCCCTCATTTATACGCTTTAAAATGTGTAAAATGCCCAACATGTGGAAATTTCAATATTAACTAAGGAAAAATAAACATTACAAAGGTCGAAGATAGGACTTCTTTTTCTGATACCATAATAGACTATCAAGCAAACTAAAAACTTAAACAGAATTACAGAATTAATTCCCCAACAGTCTCATGGATTAAAATTTAGTTATTTTCATTTCTATCATTACAACTACATATTTCAGTTGTATGTCTTATGTAGTTTGAATTAATTATGTTTGCTTTTCAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCATCATAACGGTTTCGTTCTTTTTTGGTTTATACTTTGTAAGTTTCCTTTCACTTACTACTACAGAGGAGCTGGACTTACAAAACCCTAAAGGGAAACTAACAATTATTCTCTAACATTTAACGCAGTTTTTGGGAGCCTCTTTTATTCATGATGGCCAAACGCCAATATCTCCTCCACCGTATGTTGACCCATATGCTCTTTTAGAGGACGAAAGAATTTCACAAATAGCTCCTCCTGTAAATTGACTGCTGCAAAATCCTCTAATTGGTTGGTTTTCTGCTACTTTGTTTTCCTTACCCAATATTTATTGCCACTATATGTAAATGATTATTAGCTAGAATTTTGTGGTCTTGCGCTCTATTTTATTTCTCGAAGTCTTTAGTTTTTTTTTTTCTTCGACAATATCTGGGTGGGGGGAGGGATACCAAATCTATGACCTCAAAGTTAACAGTACAAGTTGTAAAACCTTCAATCATTCACACGTAGACGGGGGTAAAAGGGGGGAAAGCTGTTGAAGAAAGGATGTAGGGGTTTATGCACGGTTTTGGGATGTTCTGTGGAGAATTTTGGAGGTTAGGGGAAAGCTTTTGGGAAAGGGAGGCAACTCTCGAATCAGTCCTTATCTCGTCTTGTTTTGTAATTGCTATGTTTTTTCTTGTTTTAGAGATATGGTAATAAATATTATTGCCCTTTTGGTTGTTTATTATTATTATTATTATTGAATTATGAAAAAGATGAGGGAGATATCCAAGTCCCTCTATTTTGGTCGTTGTTGGATAGTTTTGTGTGTGTGCTGTGTGCAGGGAGGAGATTAAGGATATGATATCTTCCATTTTTGTTTGGAAGAATGAGAAGAAGAAAAAAAAAGGGCGTTGGAATAGACGAGACGGAAGTTAGTTGGAATGAATGGAAAACCCATGAGGAGATAAAATGGGGGTGGGGTGGTGGAAGGAAATGGTGTTTGGATGTGTCAGAACTTCATTCGGACACATAGCATCCCAAAACCCTACTTTGAAACTATGTTTTGAATTTTAAACATTACTCAGAGTCAAATATTAAAATTAAATAAATAAAGTTCATAATGGTTATATCCATCATAGCATACAAACTTGGCTTTGCGCT

mRNA sequence

CAATTTAGTATTTGAACCTCATATGTTGGCTATAATGCGCACCGACAGATGCGTATACGCTTTAATCGTCGCCTCCTGTCCTGGCCTCCGCTTGCGTTTCATTTTGTTTTTGCTCTCTTTTGTGGAAAAATTAAGATGAAACTATTTCTCCCATTCAATTCTGCTATCTAACTAATCTATGGCTGCTCTTCAAATTCTCAAATCATCTCTCTCTCTTCCTTCCATCTCGCACTCGAATTTTGGCTCTCAATCAACACGCTTCGTCTCTGACTTTGATTCCCTACTCCTTCATGGACGTCGGAGGAGTTTGCGTTATGCCTGCGTTTATAGAAGGTTCACTTTCCGTTGCGCTGCTAAAGATACTGATAAGGAAACCAATGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAACAGCAGTGACTTTGAACTTGGTGGCGAGATGACTGGAGAAAACAGAGATTTCTCCCGTAGAAGTGCTGTTTCAACGGAAGTTAACAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCATCATAACGGTTTCGTTCTTTTTTGGTTTATACTTTTTTTTGGGAGCCTCTTTTATTCATGATGGCCAAACGCCAATATCTCCTCCACCGTATGTTGACCCATATGCTCTTTTAGAGGACGAAAGAATTTCACAAATAGCTCCTCCTGTAAATTGACTGCTGCAAAATCCTCTAATTGGGAGGAGATTAAGGATATGATATCTTCCATTTTTGTTTGGAAGAATGAGAAGAAGAAAAAAAAAGGGCGTTGGAATAGACGAGACGGAAGTTAGTTGGAATGAATGGAAAACCCATGAGGAGATAAAATGGGGGTGGGGTGGTGGAAGGAAATGGTGTTTGGATGTGTCAGAACTTCATTCGGACACATAGCATCCCAAAACCCTACTTTGAAACTATGTTTTGAATTTTAAACATTACTCAGAGTCAAATATTAAAATTAAATAAATAAAGTTCATAATGGTTATATCCATCATAGCATACAAACTTGGCTTTGCGCT

Coding sequence (CDS)

ATGGCTGCTCTTCAAATTCTCAAATCATCTCTCTCTCTTCCTTCCATCTCGCACTCGAATTTTGGCTCTCAATCAACACGCTTCGTCTCTGACTTTGATTCCCTACTCCTTCATGGACGTCGGAGGAGTTTGCGTTATGCCTGCGTTTATAGAAGGTTCACTTTCCGTTGCGCTGCTAAAGATACTGATAAGGAAACCAATGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAACAGCAGTGACTTTGAACTTGGTGGCGAGATGACTGGAGAAAACAGAGATTTCTCCCGTAGAAGTGCTGTTTCAACGGAAGTTAACAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCATCATAACGGTTTCGTTCTTTTTTGGTTTATACTTTTTTTTGGGAGCCTCTTTTATTCATGATGGCCAAACGCCAATATCTCCTCCACCGTATGTTGACCCATATGCTCTTTTAGAGGACGAAAGAATTTCACAAATAGCTCCTCCTGTAAATTGA

Protein sequence

MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDSLLLHGRRRSLRYACVYRRFTFRCAAKDTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFLGASFIHDGQTPISPPPYVDPYALLEDERISQIAPPVN*

Homology

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BLAST of CsGy4G000090.2 vs. NCBI nr
Match: XP_004150271.1 (uncharacterized protein LOC101221726 [Cucumis sativus])

HSP 1 Score: 420 bits (1079), Expect = 8.29e-148
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDSLLLHGRRRSLRYACVYRRFTFRCAAK 60
           MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDSLLLHGRRRSLRYACVYRRFTFRCAAK
Sbjct: 1   MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDSLLLHGRRRSLRYACVYRRFTFRCAAK 60

Query: 61  DTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRSAVST 120
           DTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRSAVST
Sbjct: 61  DTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRSAVST 120

Query: 121 EVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFL 180
           EVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFL
Sbjct: 121 EVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFL 180

Query: 181 GASFIHDGQTPISPPPYVDPYALLEDERISQIAPPVN 217
           GASFIHDGQTPISPPPYVDPYALLEDERISQIAPPVN
Sbjct: 181 GASFIHDGQTPISPPPYVDPYALLEDERISQIAPPVN 217

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BLAST of CsGy4G000090.2 vs. NCBI nr
Match: XP_008454422.1 (PREDICTED: uncharacterized protein LOC103494832 [Cucumis melo] >XP_008454423.1 PREDICTED: uncharacterized protein LOC103494832 [Cucumis melo])

HSP 1 Score: 394 bits (1012), Expect = 1.36e-137
Identity = 203/217 (93.55%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDSLLLHGRRRSLRYACVYRRFTFRCAAK 60
           MA+LQILKS+LSLPSISH NFGSQSTRF SDFDSLLLHGRRRSLR ACV RRF+FRCAAK
Sbjct: 1   MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDSLLLHGRRRSLRVACVCRRFSFRCAAK 60

Query: 61  DTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRSAVST 120
           D DKE+NGEEPPESLFMKELKKRGITPTSLLEDTN+SDF LGGEMTGENRDFSRRSAVST
Sbjct: 61  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRDFSRRSAVST 120

Query: 121 EVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFL 180
           EVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFF 
Sbjct: 121 EVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFF 180

Query: 181 GASFIHDGQTPISPPPYVDPYALLEDERISQIAPPVN 217
           G+SFIHDG+TPISPPPYVDPYALLEDERISQIAPPVN
Sbjct: 181 GSSFIHDGKTPISPPPYVDPYALLEDERISQIAPPVN 217

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BLAST of CsGy4G000090.2 vs. NCBI nr
Match: XP_038905067.1 (uncharacterized protein LOC120091218 isoform X1 [Benincasa hispida])

HSP 1 Score: 355 bits (911), Expect = 3.98e-122
Identity = 189/222 (85.14%), Postives = 201/222 (90.54%), Query Frame = 0


Query: 1   MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDS----LLLHGRRRSLRYACVYRRFTFR 60
           MAALQILKS++S PSIS  NFG QS+RF SD DS    +LLHGRRRSLRY CV RR +FR
Sbjct: 1   MAALQILKSTVSPPSISQPNFGVQSSRFFSDLDSTRRFVLLHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAKDTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRS 120
           CAA+D DK++NGEEPPESLFMKELKKRGITPTSLLEDTN+SDF LGGEMTGENRDFSRRS
Sbjct: 61  CAAQDADKDSNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGL 180
           AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFF L
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFAL 180

Query: 181 YFFLGASFIHDG-QTPISPPPYVDPYALLEDERISQIAPPVN 217
           YFF GASF+HDG +T ISPP YVDPYALLE+ERISQ APPVN
Sbjct: 181 YFFFGASFVHDGSRTAISPPSYVDPYALLEEERISQRAPPVN 222

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BLAST of CsGy4G000090.2 vs. NCBI nr
Match: XP_022984914.1 (uncharacterized protein LOC111483048 [Cucurbita maxima])

HSP 1 Score: 351 bits (900), Expect = 1.89e-120
Identity = 184/222 (82.88%), Postives = 202/222 (90.99%), Query Frame = 0


Query: 1   MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDS----LLLHGRRRSLRYACVYRRFTFR 60
           MA LQILKS++S PSIS   FGSQS+RF S+ DS    +LLHGRRRSLRY CV RR +FR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAKDTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRS 120
           CAA+D+DKE+NGEEPPESLFMKELKKRGITPTSLLEDT+++DF LGGEM GENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF L
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFLGASFIHDG-QTPISPPPYVDPYALLEDERISQIAPPVN 217
           YFFLG SF+HDG +TPISPPPYVDPYALLEDERISQ+AP VN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222

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BLAST of CsGy4G000090.2 vs. NCBI nr
Match: KAG6576903.1 (hypothetical protein SDJN03_24477, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 350 bits (898), Expect = 3.80e-120
Identity = 184/222 (82.88%), Postives = 201/222 (90.54%), Query Frame = 0


Query: 1   MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDSL----LLHGRRRSLRYACVYRRFTFR 60
           MA LQILKS++S PSIS   FGSQS+RF S+ DS     LLHGRRRSLRY CV RR +FR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAKDTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRS 120
           CAA+D+DKE+NGEEPPESLFMKELKKRGITPTSLLEDT+++DF LGGEM GENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF L
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFLGASFIHDG-QTPISPPPYVDPYALLEDERISQIAPPVN 217
           YFFLG SF+HDG +TPISPPPYVDPYALLEDERISQ+AP VN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222

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BLAST of CsGy4G000090.2 vs. ExPASy TrEMBL
Match: A0A0A0KY14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000570 PE=4 SV=1)

HSP 1 Score: 420 bits (1079), Expect = 4.01e-148
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDSLLLHGRRRSLRYACVYRRFTFRCAAK 60
           MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDSLLLHGRRRSLRYACVYRRFTFRCAAK
Sbjct: 1   MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDSLLLHGRRRSLRYACVYRRFTFRCAAK 60

Query: 61  DTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRSAVST 120
           DTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRSAVST
Sbjct: 61  DTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRSAVST 120

Query: 121 EVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFL 180
           EVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFL
Sbjct: 121 EVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFL 180

Query: 181 GASFIHDGQTPISPPPYVDPYALLEDERISQIAPPVN 217
           GASFIHDGQTPISPPPYVDPYALLEDERISQIAPPVN
Sbjct: 181 GASFIHDGQTPISPPPYVDPYALLEDERISQIAPPVN 217

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BLAST of CsGy4G000090.2 vs. ExPASy TrEMBL
Match: A0A1S3BY38 (uncharacterized protein LOC103494832 OS=Cucumis melo OX=3656 GN=LOC103494832 PE=4 SV=1)

HSP 1 Score: 394 bits (1012), Expect = 6.57e-138
Identity = 203/217 (93.55%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDSLLLHGRRRSLRYACVYRRFTFRCAAK 60
           MA+LQILKS+LSLPSISH NFGSQSTRF SDFDSLLLHGRRRSLR ACV RRF+FRCAAK
Sbjct: 1   MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDSLLLHGRRRSLRVACVCRRFSFRCAAK 60

Query: 61  DTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRSAVST 120
           D DKE+NGEEPPESLFMKELKKRGITPTSLLEDTN+SDF LGGEMTGENRDFSRRSAVST
Sbjct: 61  DADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRDFSRRSAVST 120

Query: 121 EVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFL 180
           EVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFF 
Sbjct: 121 EVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFF 180

Query: 181 GASFIHDGQTPISPPPYVDPYALLEDERISQIAPPVN 217
           G+SFIHDG+TPISPPPYVDPYALLEDERISQIAPPVN
Sbjct: 181 GSSFIHDGKTPISPPPYVDPYALLEDERISQIAPPVN 217

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BLAST of CsGy4G000090.2 vs. ExPASy TrEMBL
Match: A0A6J1JBV1 (uncharacterized protein LOC111483048 OS=Cucurbita maxima OX=3661 GN=LOC111483048 PE=4 SV=1)

HSP 1 Score: 351 bits (900), Expect = 9.13e-121
Identity = 184/222 (82.88%), Postives = 202/222 (90.99%), Query Frame = 0


Query: 1   MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDS----LLLHGRRRSLRYACVYRRFTFR 60
           MA LQILKS++S PSIS   FGSQS+RF S+ DS    +LLHGRRRSLRY CV RR +FR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAKDTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRS 120
           CAA+D+DKE+NGEEPPESLFMKELKKRGITPTSLLEDT+++DF LGGEM GENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF L
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFLGASFIHDG-QTPISPPPYVDPYALLEDERISQIAPPVN 217
           YFFLG SF+HDG +TPISPPPYVDPYALLEDERISQ+AP VN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222

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BLAST of CsGy4G000090.2 vs. ExPASy TrEMBL
Match: A0A6J1E457 (uncharacterized protein LOC111430640 OS=Cucurbita moschata OX=3662 GN=LOC111430640 PE=4 SV=1)

HSP 1 Score: 349 bits (895), Expect = 5.28e-120
Identity = 183/222 (82.43%), Postives = 201/222 (90.54%), Query Frame = 0


Query: 1   MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDSL----LLHGRRRSLRYACVYRRFTFR 60
           MA LQILKS++S PSIS   FGSQS+RF S+ DS     LLHGRRRSLRY CV RR +FR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAKDTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRS 120
           CAA+D+DKE+NGEEPPESLFMKELKKRGITPTSLLEDT+++DF LGGEM GENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF L
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFLGASFIHDG-QTPISPPPYVDPYALLEDERISQIAPPVN 217
           YFFLG SF+HDG +TPISPPPYVDPYALLEDER+SQ+AP VN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERMSQMAPRVN 222

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BLAST of CsGy4G000090.2 vs. ExPASy TrEMBL
Match: A0A6J1D5D9 (uncharacterized protein LOC111017763 OS=Momordica charantia OX=3673 GN=LOC111017763 PE=4 SV=1)

HSP 1 Score: 343 bits (881), Expect = 6.91e-118
Identity = 179/221 (81.00%), Postives = 196/221 (88.69%), Query Frame = 0


Query: 1   MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDS----LLLHGRRRSLRYACVYRRFTFR 60
           MAALQ+LKS++S  SIS  NFG +S+RF+S  DS    +  HGRRRSLRY CV RR +FR
Sbjct: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAKDTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRS 120
           CAA+D DKE+NGEEPPESLFMKELKKRG+TPTSLLED+NS+DF LGGEMTGE RDFS RS
Sbjct: 61  CAAQDADKESNGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTGEGRDFSSRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGL 180
           AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI+ITVSFFF L
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180

Query: 181 YFFLGASFIHDGQTPISPPPYVDPYALLEDERISQIAPPVN 217
           YFF G SF+H+G+TPISPPPYVDPYALLEDERISQ AP VN
Sbjct: 181 YFFFGPSFVHNGETPISPPPYVDPYALLEDERISQTAPRVN 221

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BLAST of CsGy4G000090.2 vs. TAIR 10
Match: AT1G50020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 189.9 bits (481), Expect = 2.2e-48
Identity = 100/157 (63.69%), Postives = 124/157 (78.98%), Query Frame = 0


Query: 63  DKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFEL-GGEMTGENRDFSRRSAVSTE 122
           D ++ GEEPPESLFMKELK+RG+TPTSLL+D      E+  G+ TG +   S+ +A +  
Sbjct: 56  DNQSKGEEPPESLFMKELKRRGMTPTSLLQDYEVDQDEIKTGKETGNS---SKTTATTPA 115

Query: 123 VNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFLG 182
            +KSL NQRERS+ LNSEGLEGLIPRA++LLTIGGTFFLGFWPLI++T+  F  LY + G
Sbjct: 116 FDKSLLNQRERSLALNSEGLEGLIPRARILLTIGGTFFLGFWPLIVLTLGAFSALYLYFG 175

Query: 183 ASFIHDG-QTPISPPPYVDPYALLEDERISQIAPPVN 218
           A FIHDG +TP+SPPPY+DPYALLEDERIS + P +N
Sbjct: 176 ADFIHDGSRTPVSPPPYIDPYALLEDERISGMDPRLN 209

The following BLAST results are available for this feature:

BLAST of CsGy4G000090.2 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy4G000090.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150271.1	8.29e-148	100.00	uncharacterized protein LOC101221726 [Cucumis sativus]	[more]
XP_008454422.1	1.36e-137	93.55	PREDICTED: uncharacterized protein LOC103494832 [Cucumis melo] >XP_008454423.1 P...	[more]
XP_038905067.1	3.98e-122	85.14	uncharacterized protein LOC120091218 isoform X1 [Benincasa hispida]	[more]
XP_022984914.1	1.89e-120	82.88	uncharacterized protein LOC111483048 [Cucurbita maxima]	[more]
KAG6576903.1	3.80e-120	82.88	hypothetical protein SDJN03_24477, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsGy4G000090.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY14	4.01e-148	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000570 PE=4 SV=1	[more]
A0A1S3BY38	6.57e-138	93.55	uncharacterized protein LOC103494832 OS=Cucumis melo OX=3656 GN=LOC103494832 PE=...	[more]
A0A6J1JBV1	9.13e-121	82.88	uncharacterized protein LOC111483048 OS=Cucurbita maxima OX=3661 GN=LOC111483048...	[more]
A0A6J1E457	5.28e-120	82.43	uncharacterized protein LOC111430640 OS=Cucurbita moschata OX=3662 GN=LOC1114306...	[more]
A0A6J1D5D9	6.91e-118	81.00	uncharacterized protein LOC111017763 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

BLAST of CsGy4G000090.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50020.1	2.2e-48	63.69	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..131
None	No IPR available	PANTHER	PTHR35699	F2J10.10 PROTEIN	coord: 1..217

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy4G000090	CsGy4G000090	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy4G000090.2.utr5p1	CsGy4G000090.2.utr5p1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy4G000090.2.exon1	CsGy4G000090.2.exon1	exon
CsGy4G000090.2.exon2	CsGy4G000090.2.exon2	exon
CsGy4G000090.2.exon3	CsGy4G000090.2.exon3	exon
CsGy4G000090.2.exon4	CsGy4G000090.2.exon4	exon
CsGy4G000090.2.exon5	CsGy4G000090.2.exon5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy4G000090.2	cds.CsGy4G000090.2	CDS
cds.CsGy4G000090.2	cds.CsGy4G000090.2_2	CDS
cds.CsGy4G000090.2	cds.CsGy4G000090.2_3	CDS
cds.CsGy4G000090.2	cds.CsGy4G000090.2_4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy4G000090.2.utr3p1	CsGy4G000090.2.utr3p1	three_prime_UTR
CsGy4G000090.2.utr3p2	CsGy4G000090.2.utr3p2	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy4G000090.2	CsGy4G000090.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane