CsGy3G043930.1 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G043930.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Ribosome maturation factor
Location	Gy14Chr3: 40773004 .. 40774913 (+)
Sequence length	1728
RNA-Seq Expression	CsGy3G043930.1
Synteny	CsGy3G043930.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGTGAAAGAGTAGGAAGGTATAGTTGGTTAGTTGATTTAAATCGATTTAAGCCTTTAAATTTTGTTCGGTGTGACATATATGGATTAATTTAAAATAAAGGGGTGAAAATATAAAAAACGAGGAGAGACTGAGGGGTCAAATTGTAAAAGTTGAATATGAGGAGGGGGAAATGGAAAAGTAAGATTAAAAAGTAATGAGGGGTGAACTAAGGCTTTGGCTTTCAGTGAGCAAACATTGCTTCTCTCTCTCTACTTCTCTCTCTCTACCATGCAAAGGCAATCTCTAGGTTCACCAGTTTCCAAGCTCCACGGCCATGGCGCCGGAGCAAAGTCCGATGAGGATCCGGCCGACGATCAAAAGCGCAAGAAGCACTCTCCATCTTCTTCCTCAATTCTCAACTACGGCGGACAAGACGACGATAAATCCTCTAAATCTTTCCGATTCTCATTTCCCTCGCCTTCTCCTCCGCGCCAAGAGAAGTTAGTTCACGCCATACCTATTCTCACCATTATCTGCTTCCTCATACTTTACATCTTCTCGCACAGTCCTTCGCAGTCAGGTATATATACCTAATTCCTCTCATCGCAATAATCGACAATATACTCGTTCTTTAGTTTCATTCTAATCGGTCGTTTTTAATCGTTTCAGATTTGGCGCAGTTTCACGGATTCAAGCATCCTTCACAACAATTAGGTATAATGTAGTAAAAGATTTTCACAAATTGATGTATTGTCTGTGTGATTTCTGTAATTGAACATTTTGTATATATTTGTCGTTTTTTAGCAGAAATCAAAGCCGATGGAGACGAACTTATTCTTCCCAAGAAAGGCAACATTCTAGCGATTCAAAGTTTCCGTAACCTAAAAGAGATTGAAAAATCATACTCTCTTAAATCTTGCCCTCCGCGGAAACTCGCCGATTTCTAAACTCTCTGCATTTCCATTTATCTGACCTTCCGGTAAACTCTCACGAACTTCGTTTCCGCAGTGCGGATTCACTCACCGGCGCGTGTGCATCCATAACTTTTTTCTTTCCAACGCCTCCTGTACATCAAATAATCCGTCAGATCATTAAATTGTTTTTTATTTATTTTTTCTTTCGCTTTTACTATTTTTTTGTTCGCCTCTGCATACGCCGGCGGCGCTTATGTAACATCCGACGAGATACTCTCAATTTAATCTAAACAAAGAATGAACATAATTTATCAGCATTAGATCAGTGAGCAGAATCACTAATCAACGCGCTATATTTTCGGCGGATGTGGAGCGCGTGAAGGCCGGCACCGGCGCGGCGGAGATGGAAATGGAATCCAGCTGGAATATATATTTATCACTTATCATTTATTTTTCGACTTTCCGAATCGGACCGTTACGGCATTGGGAGAAGGACCTCAAGATGCCAGCTGGAAAAAAATGAAAGAGTCGCTGACGGTATCAGGTTCTTTCTTTCTTGTATATTTATTCTTAGGCCCTCCATCTATTGCCTATTTATTTTCATTTAATTTACTTCTTCTTGGCCTCTCTCATGTCAAAGTATATTAGGACCCTTTAGTAGTTAGTAGACTTAAAATAAAGAATAATTTTCATAAATATAATATTTACCTTCTAGGTAACAAAACGAAAAAGCCACTAAAACCATTTAAACCTGTGTACTTTGACAAATAAATGGATTAAAATTGGAGATTTGAAAGGAGAGTAGTAAAATAAATGGATTGGAGGAGTGATAAAAGTAATGAAGGAGTAGAATGTAAATTAACCATAAATGGGAAAGATTGATGGTAGTTAGAGAGTAGATGTGTGAATTTTATAGAAATGTTGTAATGAAATTTGTTTGTCGGTAGATGGGACTTTTTCAAAAATAAACAAATATGTAGATATAGATATTAGTTTTGATGTGTAATTAAAAAG

mRNA sequence

ACTGTGAAAGAGTAGGAAGGTATAGTTGGTTAGTTGATTTAAATCGATTTAAGCCTTTAAATTTTGTTCGGTGTGACATATATGGATTAATTTAAAATAAAGGGGTGAAAATATAAAAAACGAGGAGAGACTGAGGGGTCAAATTGTAAAAGTTGAATATGAGGAGGGGGAAATGGAAAAGTAAGATTAAAAAGTAATGAGGGGTGAACTAAGGCTTTGGCTTTCAGTGAGCAAACATTGCTTCTCTCTCTCTACTTCTCTCTCTCTACCATGCAAAGGCAATCTCTAGGTTCACCAGTTTCCAAGCTCCACGGCCATGGCGCCGGAGCAAAGTCCGATGAGGATCCGGCCGACGATCAAAAGCGCAAGAAGCACTCTCCATCTTCTTCCTCAATTCTCAACTACGGCGGACAAGACGACGATAAATCCTCTAAATCTTTCCGATTCTCATTTCCCTCGCCTTCTCCTCCGCGCCAAGAGAAGTTAGTTCACGCCATACCTATTCTCACCATTATCTGCTTCCTCATACTTTACATCTTCTCGCACAGTCCTTCGCAGTCAGATTTGGCGCAGTTTCACGGATTCAAGCATCCTTCACAACAATTAGAAATCAAAGCCGATGGAGACGAACTTATTCTTCCCAAGAAAGGCAACATTCTAGCGATTCAAAGTTTCCGTAACCTAAAAGAGATTGAAAAATCATACTCTCTTAAATCTTGCCCTCCGCGGAAACTCGCCGATTTCTAAACTCTCTGCATTTCCATTTATCTGACCTTCCGGTAAACTCTCACGAACTTCGTTTCCGCAGTGCGGATTCACTCACCGGCGCGTGTGCATCCATAACTTTTTTCTTTCCAACGCCTCCTGTACATCAAATAATCCGTCAGATCATTAAATTGTTTTTTATTTATTTTTTCTTTCGCTTTTACTATTTTTTTGTTCGCCTCTGCATACGCCGGCGGCGCTTATGTAACATCCGACGAGATACTCTCAATTTAATCTAAACAAAGAATGAACATAATTTATCAGCATTAGATCAGTGAGCAGAATCACTAATCAACGCGCTATATTTTCGGCGGATGTGGAGCGCGTGAAGGCCGGCACCGGCGCGGCGGAGATGGAAATGGAATCCAGCTGGAATATATATTTATCACTTATCATTTATTTTTCGACTTTCCGAATCGGACCGTTACGGCATTGGGAGAAGGACCTCAAGATGCCAGCTGGAAAAAAATGAAAGAGTCGCTGACGGTATCAGGTTCTTTCTTTCTTGTATATTTATTCTTAGGCCCTCCATCTATTGCCTATTTATTTTCATTTAATTTACTTCTTCTTGGCCTCTCTCATGTCAAAGTATATTAGGACCCTTTAGTAGTTAGTAGACTTAAAATAAAGAATAATTTTCATAAATATAATATTTACCTTCTAGGTAACAAAACGAAAAAGCCACTAAAACCATTTAAACCTGTGTACTTTGACAAATAAATGGATTAAAATTGGAGATTTGAAAGGAGAGTAGTAAAATAAATGGATTGGAGGAGTGATAAAAGTAATGAAGGAGTAGAATGTAAATTAACCATAAATGGGAAAGATTGATGGTAGTTAGAGAGTAGATGTGTGAATTTTATAGAAATGTTGTAATGAAATTTGTTTGTCGGTAGATGGGACTTTTTCAAAAATAAACAAATATGTAGATATAGATATTAGTTTTGATGTGTAATTAAAAAG

Coding sequence (CDS)

ATGCAAAGGCAATCTCTAGGTTCACCAGTTTCCAAGCTCCACGGCCATGGCGCCGGAGCAAAGTCCGATGAGGATCCGGCCGACGATCAAAAGCGCAAGAAGCACTCTCCATCTTCTTCCTCAATTCTCAACTACGGCGGACAAGACGACGATAAATCCTCTAAATCTTTCCGATTCTCATTTCCCTCGCCTTCTCCTCCGCGCCAAGAGAAGTTAGTTCACGCCATACCTATTCTCACCATTATCTGCTTCCTCATACTTTACATCTTCTCGCACAGTCCTTCGCAGTCAGATTTGGCGCAGTTTCACGGATTCAAGCATCCTTCACAACAATTAGAAATCAAAGCCGATGGAGACGAACTTATTCTTCCCAAGAAAGGCAACATTCTAGCGATTCAAAGTTTCCGTAACCTAAAAGAGATTGAAAAATCATACTCTCTTAAATCTTGCCCTCCGCGGAAACTCGCCGATTTCTAA

Protein sequence

MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSCPPRKLADF*

Homology

[Close]

BLAST of CsGy3G043930.1 vs. NCBI nr
Match: XP_004136199.1 (uncharacterized protein LOC101212292 isoform X2 [Cucumis sativus])

HSP 1 Score: 310 bits (793), Expect = 3.78e-106
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60
           MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS
Sbjct: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60

Query: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLEIKADGDE 120
           FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLEIKADGDE
Sbjct: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLEIKADGDE 120

Query: 121 LILPKKGNILAIQSFRNLKEIEKSYSLKSCPPRKLADF 158
           LILPKKGNILAIQSFRNLKEIEKSYSLKS PPRKLADF
Sbjct: 121 LILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF 158

[Close]

BLAST of CsGy3G043930.1 vs. NCBI nr
Match: XP_011652641.1 (uncharacterized protein LOC101212292 isoform X1 [Cucumis sativus])

HSP 1 Score: 305 bits (781), Expect = 2.65e-104
Identity = 157/159 (98.74%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60
           MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS
Sbjct: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60

Query: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQL-EIKADGD 120
           FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQL EIKADGD
Sbjct: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLAEIKADGD 120

Query: 121 ELILPKKGNILAIQSFRNLKEIEKSYSLKSCPPRKLADF 158
           ELILPKKGNILAIQSFRNLKEIEKSYSLKS PPRKLADF
Sbjct: 121 ELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF 159

[Close]

BLAST of CsGy3G043930.1 vs. NCBI nr
Match: XP_008466005.1 (PREDICTED: uncharacterized protein LOC103503567 isoform X2 [Cucumis melo] >KAA0038558.1 hypothetical protein E6C27_scaffold92G00860 [Cucumis melo var. makuwa] >TYK31184.1 hypothetical protein E5676_scaffold455G004680 [Cucumis melo var. makuwa])

HSP 1 Score: 297 bits (761), Expect = 2.97e-101
Identity = 154/159 (96.86%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60
           MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS
Sbjct: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60

Query: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLEIKAD-GD 120
           FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFK PSQQLEIKAD G 
Sbjct: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKRPSQQLEIKADDGH 120

Query: 121 ELILPKKGNILAIQSFRNLKEIEKSYSLKSCPPRKLADF 158
           ELILPKKGNILAIQSFRNLKEIEKS+SLKS PPRKLADF
Sbjct: 121 ELILPKKGNILAIQSFRNLKEIEKSHSLKSRPPRKLADF 159

[Close]

BLAST of CsGy3G043930.1 vs. NCBI nr
Match: XP_008466004.1 (PREDICTED: uncharacterized protein LOC103503567 isoform X1 [Cucumis melo])

HSP 1 Score: 293 bits (749), Expect = 2.08e-99
Identity = 154/160 (96.25%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60
           MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS
Sbjct: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60

Query: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQL-EIKAD-G 120
           FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFK PSQQL EIKAD G
Sbjct: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKRPSQQLAEIKADDG 120

Query: 121 DELILPKKGNILAIQSFRNLKEIEKSYSLKSCPPRKLADF 158
            ELILPKKGNILAIQSFRNLKEIEKS+SLKS PPRKLADF
Sbjct: 121 HELILPKKGNILAIQSFRNLKEIEKSHSLKSRPPRKLADF 160

[Close]

BLAST of CsGy3G043930.1 vs. NCBI nr
Match: XP_038888243.1 (uncharacterized protein LOC120078100 [Benincasa hispida])

HSP 1 Score: 279 bits (714), Expect = 4.51e-94
Identity = 144/160 (90.00%), Postives = 149/160 (93.12%), Query Frame = 0


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60
           MQRQSLGSPVSKLHGHGAGAKSDE PADDQKRKKHSPSSSSI NY GQDDD++SKSFRFS
Sbjct: 1   MQRQSLGSPVSKLHGHGAGAKSDEVPADDQKRKKHSPSSSSIFNYDGQDDDQASKSFRFS 60

Query: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLEIKADGDE 120
           FPSP PPRQEK VHAIPILTIICFLILY  SH+PSQSDLAQFHGFK P++QLEIKADGDE
Sbjct: 61  FPSPYPPRQEKFVHAIPILTIICFLILYFCSHNPSQSDLAQFHGFKRPAEQLEIKADGDE 120

Query: 121 LILPKKGNILAIQSFRNLKEIEKSYSL--KSCPPRKLADF 158
           LILPKKGNILAIQSFRNLKEIEKSYSL  KS PPRKLADF
Sbjct: 121 LILPKKGNILAIQSFRNLKEIEKSYSLSLKSRPPRKLADF 160

[Close]

BLAST of CsGy3G043930.1 vs. ExPASy TrEMBL
Match: A0A0A0LE94 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901050 PE=4 SV=1)

HSP 1 Score: 310 bits (793), Expect = 1.83e-106
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60
           MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS
Sbjct: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60

Query: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLEIKADGDE 120
           FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLEIKADGDE
Sbjct: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLEIKADGDE 120

Query: 121 LILPKKGNILAIQSFRNLKEIEKSYSLKSCPPRKLADF 158
           LILPKKGNILAIQSFRNLKEIEKSYSLKS PPRKLADF
Sbjct: 121 LILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF 158

[Close]

BLAST of CsGy3G043930.1 vs. ExPASy TrEMBL
Match: A0A5A7T6T2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004680 PE=4 SV=1)

HSP 1 Score: 297 bits (761), Expect = 1.44e-101
Identity = 154/159 (96.86%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60
           MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS
Sbjct: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60

Query: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLEIKAD-GD 120
           FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFK PSQQLEIKAD G 
Sbjct: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKRPSQQLEIKADDGH 120

Query: 121 ELILPKKGNILAIQSFRNLKEIEKSYSLKSCPPRKLADF 158
           ELILPKKGNILAIQSFRNLKEIEKS+SLKS PPRKLADF
Sbjct: 121 ELILPKKGNILAIQSFRNLKEIEKSHSLKSRPPRKLADF 159

[Close]

BLAST of CsGy3G043930.1 vs. ExPASy TrEMBL
Match: A0A1S3CQJ2 (uncharacterized protein LOC103503567 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503567 PE=4 SV=1)

HSP 1 Score: 297 bits (761), Expect = 1.44e-101
Identity = 154/159 (96.86%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60
           MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS
Sbjct: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60

Query: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLEIKAD-GD 120
           FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFK PSQQLEIKAD G 
Sbjct: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKRPSQQLEIKADDGH 120

Query: 121 ELILPKKGNILAIQSFRNLKEIEKSYSLKSCPPRKLADF 158
           ELILPKKGNILAIQSFRNLKEIEKS+SLKS PPRKLADF
Sbjct: 121 ELILPKKGNILAIQSFRNLKEIEKSHSLKSRPPRKLADF 159

[Close]

BLAST of CsGy3G043930.1 vs. ExPASy TrEMBL
Match: A0A1S3CQ78 (uncharacterized protein LOC103503567 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503567 PE=4 SV=1)

HSP 1 Score: 293 bits (749), Expect = 1.01e-99
Identity = 154/160 (96.25%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60
           MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS
Sbjct: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60

Query: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQL-EIKAD-G 120
           FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFK PSQQL EIKAD G
Sbjct: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKRPSQQLAEIKADDG 120

Query: 121 DELILPKKGNILAIQSFRNLKEIEKSYSLKSCPPRKLADF 158
            ELILPKKGNILAIQSFRNLKEIEKS+SLKS PPRKLADF
Sbjct: 121 HELILPKKGNILAIQSFRNLKEIEKSHSLKSRPPRKLADF 160

[Close]

BLAST of CsGy3G043930.1 vs. ExPASy TrEMBL
Match: A0A6J1JZ13 (uncharacterized protein LOC111491006 OS=Cucurbita maxima OX=3661 GN=LOC111491006 PE=4 SV=1)

HSP 1 Score: 273 bits (697), Expect = 7.95e-92
Identity = 139/158 (87.97%), Postives = 146/158 (92.41%), Query Frame = 0


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFS 60
           MQRQSLGSPVSKLHGHGAGAKSD  PADDQKR KHSPSSS ILNY GQDDDK+SKSFRFS
Sbjct: 1   MQRQSLGSPVSKLHGHGAGAKSDAVPADDQKRNKHSPSSSLILNYDGQDDDKASKSFRFS 60

Query: 61  FPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQLEIKADGDE 120
           FP+PSP RQEK VHAIPILTIICFLILYIFSHSPSQSDLAQFHGFK PS+ LEIKA+GDE
Sbjct: 61  FPTPSPQRQEKFVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKRPSEHLEIKAEGDE 120

Query: 121 LILPKKGNILAIQSFRNLKEIEKSYSLKSCPPRKLADF 158
           LI+PKKGNILAIQS RNLKEIEKS+SL+S  PRKLADF
Sbjct: 121 LIVPKKGNILAIQSLRNLKEIEKSHSLRSRAPRKLADF 158

[Close]

BLAST of CsGy3G043930.1 vs. TAIR 10
Match: AT2G35470.1 (unknown protein; Has 25 Blast hits to 25 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 109.8 bits (273), Expect = 2.1e-24
Identity = 84/173 (48.55%), Postives = 106/173 (61.27%), Query Frame = 0


Query: 1   MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSP-SSSSILNYGGQDDDKSSKSFR- 60
           MQR SL S  SKLH +G G K D    DD K    SP SSSS ++Y    DD   K F+ 
Sbjct: 1   MQRISLDSSASKLHSYG-GRKDDTYDIDDLKPASSSPSSSSSAVDY----DDHELKDFKP 60

Query: 61  ---FSFPSP---SPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQQL 120
               S  SP   +  +QEKLVH IPILT+ICF+ILY+ S++PSQSDLAQF+GF  PS+ L
Sbjct: 61  RRLSSLQSPFVTTNQKQEKLVHFIPILTLICFIILYLTSYAPSQSDLAQFNGFMRPSKHL 120

Query: 121 EIK-ADGDELILPKKGNILAIQ-SFRNLKEIEKSYSLKSCP-----PRKLADF 159
           E    +GDE+    + + L+I+ S RNL+E E S++ KS P      RK ADF
Sbjct: 121 ESSDENGDEISGFIRADTLSIRSSVRNLQETE-SFTTKSLPRRRTSHRKTADF 167

The following BLAST results are available for this feature:

BLAST of CsGy3G043930.1 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G043930.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136199.1	3.78e-106	99.37	uncharacterized protein LOC101212292 isoform X2 [Cucumis sativus]	[more]
XP_011652641.1	2.65e-104	98.74	uncharacterized protein LOC101212292 isoform X1 [Cucumis sativus]	[more]
XP_008466005.1	2.97e-101	96.86	PREDICTED: uncharacterized protein LOC103503567 isoform X2 [Cucumis melo] >KAA00...	[more]
XP_008466004.1	2.08e-99	96.25	PREDICTED: uncharacterized protein LOC103503567 isoform X1 [Cucumis melo]	[more]
XP_038888243.1	4.51e-94	90.00	uncharacterized protein LOC120078100 [Benincasa hispida]	[more]

BLAST of CsGy3G043930.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LE94	1.83e-106	99.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901050 PE=4 SV=1	[more]
A0A5A7T6T2	1.44e-101	96.86	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CQJ2	1.44e-101	96.86	uncharacterized protein LOC103503567 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CQ78	1.01e-99	96.25	uncharacterized protein LOC103503567 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1JZ13	7.95e-92	87.97	uncharacterized protein LOC111491006 OS=Cucurbita maxima OX=3661 GN=LOC111491006...	[more]

BLAST of CsGy3G043930.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35470.1	2.1e-24	48.55	unknown protein; Has 25 Blast hits to 25 proteins in 8 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..69
None	No IPR available	PANTHER	PTHR35297	PROTEIN, PUTATIVE-RELATED	coord: 1..158
None	No IPR available	PANTHER	PTHR35297:SF2	PROTEIN, PUTATIVE-RELATED	coord: 1..158

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy3G043930	CsGy3G043930	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G043930.1.utr5p1	CsGy3G043930.1.utr5p1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G043930.1.exon1	CsGy3G043930.1.exon1	exon
CsGy3G043930.1.exon2	CsGy3G043930.1.exon2	exon
CsGy3G043930.1.exon3	CsGy3G043930.1.exon3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy3G043930.1	cds.CsGy3G043930.1	CDS
cds.CsGy3G043930.1	cds.CsGy3G043930.1_2	CDS
cds.CsGy3G043930.1	cds.CsGy3G043930.1_3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G043930.1.utr3p1	CsGy3G043930.1.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy3G043930.1	CsGy3G043930.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane