CsGy3G023870.1 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G023870.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	squamosa promoter-binding-like protein 13A
Location	Gy14Chr3: 23868122 .. 23869412 (+)
Sequence length	1035
RNA-Seq Expression	CsGy3G023870.1
Synteny	CsGy3G023870.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTGGGGTTGGGGAAAGTTTTCTGGAGAACCCATTTTTCCTGAAAACAAACAGAATCCTCCCTCCACTTTCTCTGACTCGATTGGCTCCAACAAGGGTTCCAGTCAAGAAAGTTCTTCCTCTCATGGATCCTCTAAAAGGACTCGATTACTCCATGCCAACCAAAACCAGACGTGTTTGGTCGATGGATGTGACACTGACCTCACCAATTGCAAGGATTATCATCGACGCCATAGGGTATGCGATTCTCACTCCAAAACCCCTGTTGTGATGGTTAGAGGAGAGGAGAAACGATTCTGTCAACAGTGTAGCAGGTAAAAACAACCAAAAATAATTGATGGATTTTTGTTTCTTTTGTTTGGATTTTGCCCCAAAATGTATGGTTTGTTGATTGTTCTTGAGTAAAAGTATTGTAGATTCCATTCGCTTGGTGAGTTTGATGAGGTGAAGAGGAGCTGTAGGAAGCGGCTTGATGGCCATAATCGACGTCGGAGGAAGCCTCAGCCTGAATCACTGTTTATGAGTTCAAGTGATTTTCTGTCAAATTGTAAAGGTTAGCAACTGATTTTTGTTTCGAAATATACCATAGAAATGTGTTGATTGATGGATGTGGTTGTTTGGAGGGGGGAAACTAAAAAGGAAACAAAAAATGATTCATGATTGTTGTTGTGATTTGTAAAATTGGGTTATCCTTCTCAAATCCATAGGTCCAATTGTGCTGCAGTTCAGTGATCAACAGATTCATCATGTGTCCGAGGAAATTGGTAGGAGTTTATGGCCTGTTAGGACTGAAGGTGAAAAGAAATCTTCAATGGTTCCATCAAATTCCTCTGCTTACTTCAGTTATGGAAGAGGAGATAACAAAGAGTTGCCATTTTTCCTGCATAAAAATGGCAAAAGACAAAGCAAGCAAATAGTTTCTTCTCAGCTGTCTTTCAATCAGCAACTTCCTAATGTAATCTCTCAGGGTAGTGAGGTGGACAACCAGAAACCAGTGACCACCGATACTTCGCCCGAGGATTCGGGTTGTGCTCTCTATCTTCTGTCATCACGCACAGTGCAAGCTCACTCGGATGCTGGCTTGAGCTCTTTGGTTCAGTCCCATCTGAGTGTTCCAGTCCAAACTCATGAGACTGAGCTGCATTTCAGTAGTCTAAGTGACTTCTCTGGCTCCTTTGACTCTAAGGACAAGCCTGTTTCTTCTCAGTTGGGTCTTGAAATGGAGGAAGAATCTGATGGTTTGTTCCAAAGTGAGGCTCCCCATAAGTTTCCCATTTCTTGGGAGTAG

mRNA sequence

ATGGATTGGGGTTGGGGAAAGTTTTCTGGAGAACCCATTTTTCCTGAAAACAAACAGAATCCTCCCTCCACTTTCTCTGACTCGATTGGCTCCAACAAGGGTTCCAGTCAAGAAAGTTCTTCCTCTCATGGATCCTCTAAAAGGACTCGATTACTCCATGCCAACCAAAACCAGACGTGTTTGGTCGATGGATGTGACACTGACCTCACCAATTGCAAGGATTATCATCGACGCCATAGGGTATGCGATTCTCACTCCAAAACCCCTGTTGTGATGGTTAGAGGAGAGGAGAAACGATTCTGTCAACAGTGTAGCAGATTCCATTCGCTTGGTGAGTTTGATGAGGTGAAGAGGAGCTGTAGGAAGCGGCTTGATGGCCATAATCGACGTCGGAGGAAGCCTCAGCCTGAATCACTGTTTATGAGTTCAAGTGATTTTCTGTCAAATTGTAAAGGTCCAATTGTGCTGCAGTTCAGTGATCAACAGATTCATCATGTGTCCGAGGAAATTGGTAGGAGTTTATGGCCTGTTAGGACTGAAGGTGAAAAGAAATCTTCAATGGTTCCATCAAATTCCTCTGCTTACTTCAGTTATGGAAGAGGAGATAACAAAGAGTTGCCATTTTTCCTGCATAAAAATGGCAAAAGACAAAGCAAGCAAATAGTTTCTTCTCAGCTGTCTTTCAATCAGCAACTTCCTAATGTAATCTCTCAGGGTAGTGAGGTGGACAACCAGAAACCAGTGACCACCGATACTTCGCCCGAGGATTCGGGTTGTGCTCTCTATCTTCTGTCATCACGCACAGTGCAAGCTCACTCGGATGCTGGCTTGAGCTCTTTGGTTCAGTCCCATCTGAGTGTTCCAGTCCAAACTCATGAGACTGAGCTGCATTTCAGTAGTCTAAGTGACTTCTCTGGCTCCTTTGACTCTAAGGACAAGCCTGTTTCTTCTCAGTTGGGTCTTGAAATGGAGGAAGAATCTGATGGTTTGTTCCAAAGTGAGGCTCCCCATAAGTTTCCCATTTCTTGGGAGTAG

Coding sequence (CDS)

ATGGATTGGGGTTGGGGAAAGTTTTCTGGAGAACCCATTTTTCCTGAAAACAAACAGAATCCTCCCTCCACTTTCTCTGACTCGATTGGCTCCAACAAGGGTTCCAGTCAAGAAAGTTCTTCCTCTCATGGATCCTCTAAAAGGACTCGATTACTCCATGCCAACCAAAACCAGACGTGTTTGGTCGATGGATGTGACACTGACCTCACCAATTGCAAGGATTATCATCGACGCCATAGGGTATGCGATTCTCACTCCAAAACCCCTGTTGTGATGGTTAGAGGAGAGGAGAAACGATTCTGTCAACAGTGTAGCAGATTCCATTCGCTTGGTGAGTTTGATGAGGTGAAGAGGAGCTGTAGGAAGCGGCTTGATGGCCATAATCGACGTCGGAGGAAGCCTCAGCCTGAATCACTGTTTATGAGTTCAAGTGATTTTCTGTCAAATTGTAAAGGTCCAATTGTGCTGCAGTTCAGTGATCAACAGATTCATCATGTGTCCGAGGAAATTGGTAGGAGTTTATGGCCTGTTAGGACTGAAGGTGAAAAGAAATCTTCAATGGTTCCATCAAATTCCTCTGCTTACTTCAGTTATGGAAGAGGAGATAACAAAGAGTTGCCATTTTTCCTGCATAAAAATGGCAAAAGACAAAGCAAGCAAATAGTTTCTTCTCAGCTGTCTTTCAATCAGCAACTTCCTAATGTAATCTCTCAGGGTAGTGAGGTGGACAACCAGAAACCAGTGACCACCGATACTTCGCCCGAGGATTCGGGTTGTGCTCTCTATCTTCTGTCATCACGCACAGTGCAAGCTCACTCGGATGCTGGCTTGAGCTCTTTGGTTCAGTCCCATCTGAGTGTTCCAGTCCAAACTCATGAGACTGAGCTGCATTTCAGTAGTCTAAGTGACTTCTCTGGCTCCTTTGACTCTAAGGACAAGCCTGTTTCTTCTCAGTTGGGTCTTGAAATGGAGGAAGAATCTGATGGTTTGTTCCAAAGTGAGGCTCCCCATAAGTTTCCCATTTCTTGGGAGTAG

Protein sequence

MDWGWGKFSGEPIFPENKQNPPSTFSDSIGSNKGSSQESSSSHGSSKRTRLLHANQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVRTEGEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQIVSSQLSFNQQLPNVISQGSEVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSSLSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQSEAPHKFPISWE*

Homology

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BLAST of CsGy3G023870.1 vs. ExPASy Swiss-Prot
Match: B9DI20 (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.0e-36
Identity = 126/347 (36.31%), Postives = 170/347 (48.99%), Query Frame = 0


Query: 8   FSGEPIFPENKQNPPSTFSD-----SIGSNKGS--SQESSSSHGSSKRTR--LLHANQNQ 67
           FS +     N  N  S F D     S+   K S  ++   S   SSKRTR   +  NQ  
Sbjct: 40  FSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMP 99

Query: 68  TCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKR 127
            CLVDGCD+D +NC++YH+RH+VCD HSKTPVV + G ++RFCQQCSRFH+L EFDE KR
Sbjct: 100 ICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKR 159

Query: 128 SCRKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVR 187
           SCRKRLDGHNRRRRKPQPE +    ++F +  +G  +L+FS       +  +    W   
Sbjct: 160 SCRKRLDGHNRRRRKPQPEHI-GRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW--- 219

Query: 188 TEGEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNG-KRQSKQIVSSQLSFNQQLPNVIS 247
                 S  V +N S   SYG+  +  +     K G         +S  S  +Q P +  
Sbjct: 220 -GNSLVSVAVAANGS---SYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQE 279

Query: 248 QGSEVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELH 307
           + S           +   DS CAL LLSS      S + +  L+Q  LS+  +  ET  +
Sbjct: 280 EESSRTASLCERMTSCIHDSDCALSLLSS------SSSSVPHLLQPPLSLSQEAVETVFY 339

Query: 308 FSSLSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQSEAPHKFPISWE 345
            S L + + S  S    +S    + +            P  FP  WE
Sbjct: 340 GSGLFE-NASAVSDGSVISGNEAVRL------------PQTFPFHWE 359

[Close]

BLAST of CsGy3G023870.1 vs. ExPASy Swiss-Prot
Match: P0DI11 (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.0e-36
Identity = 126/347 (36.31%), Postives = 170/347 (48.99%), Query Frame = 0


Query: 8   FSGEPIFPENKQNPPSTFSD-----SIGSNKGS--SQESSSSHGSSKRTR--LLHANQNQ 67
           FS +     N  N  S F D     S+   K S  ++   S   SSKRTR   +  NQ  
Sbjct: 40  FSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMP 99

Query: 68  TCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKR 127
            CLVDGCD+D +NC++YH+RH+VCD HSKTPVV + G ++RFCQQCSRFH+L EFDE KR
Sbjct: 100 ICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKR 159

Query: 128 SCRKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVR 187
           SCRKRLDGHNRRRRKPQPE +    ++F +  +G  +L+FS       +  +    W   
Sbjct: 160 SCRKRLDGHNRRRRKPQPEHI-GRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW--- 219

Query: 188 TEGEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNG-KRQSKQIVSSQLSFNQQLPNVIS 247
                 S  V +N S   SYG+  +  +     K G         +S  S  +Q P +  
Sbjct: 220 -GNSLVSVAVAANGS---SYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQE 279

Query: 248 QGSEVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELH 307
           + S           +   DS CAL LLSS      S + +  L+Q  LS+  +  ET  +
Sbjct: 280 EESSRTASLCERMTSCIHDSDCALSLLSS------SSSSVPHLLQPPLSLSQEAVETVFY 339

Query: 308 FSSLSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQSEAPHKFPISWE 345
            S L + + S  S    +S    + +            P  FP  WE
Sbjct: 340 GSGLFE-NASAVSDGSVISGNEAVRL------------PQTFPFHWE 359

[Close]

BLAST of CsGy3G023870.1 vs. ExPASy Swiss-Prot
Match: Q0J0K1 (Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL18 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.0e-33
Identity = 68/104 (65.38%), Postives = 80/104 (76.92%), Query Frame = 0


Query: 56  QNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDE 115
           Q  +C VDGC  DL+  +DYHRRH+VC+ HSKTPVV+V G E RFCQQCSRFH LGEFDE
Sbjct: 111 QCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDE 170

Query: 116 VKRSCRKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFS 160
            KRSCRKRLDGHNRRRRKPQ +S  MSS  F+++ +G     F+
Sbjct: 171 AKRSCRKRLDGHNRRRRKPQADS--MSSGSFMTSQQGTRFASFT 212

[Close]

BLAST of CsGy3G023870.1 vs. ExPASy Swiss-Prot
Match: Q49I55 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.0e-32
Identity = 70/121 (57.85%), Postives = 89/121 (73.55%), Query Frame = 0


Query: 37  QESSSSHGSSKRTRLL-----HANQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVV 96
           +E  ++ G++KR R          Q  +C VDGC  DL  C+DYHRRH+VC++HSKTPVV
Sbjct: 76  REREAAAGAAKRPRPAGPGGQQQQQCPSCAVDGCRADLGKCRDYHRRHKVCEAHSKTPVV 135

Query: 97  MVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFMSSSDFLSNCK 153
           +V G E RFCQQCSRFH L EFD  KRSCRKRLDGHNRRRRKPQP++  M+S+ F+++ +
Sbjct: 136 VVAGREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRRRKPQPDT--MASASFIASQQ 194

[Close]

BLAST of CsGy3G023870.1 vs. ExPASy Swiss-Prot
Match: Q49I57 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.6e-32
Identity = 70/122 (57.38%), Postives = 89/122 (72.95%), Query Frame = 0


Query: 37  QESSSSHGSSKRTR------LLHANQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPV 96
           +E  ++ G++KR R           Q  +C VDGC  DL  C+DYHRRH+VC++HSKTPV
Sbjct: 76  REREAAAGAAKRPRPAGPGGQQQQQQCPSCAVDGCRADLGKCRDYHRRHKVCEAHSKTPV 135

Query: 97  VMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFMSSSDFLSNC 153
           V+V G E RFCQQCSRFH L EFD  KRSCRKRLDGHNRRRRKPQP++  M+S+ F+++ 
Sbjct: 136 VVVAGREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRRRKPQPDT--MASASFIASQ 195

[Close]

BLAST of CsGy3G023870.1 vs. NCBI nr
Match: XP_004148013.1 (squamosa promoter-binding-like protein 13A [Cucumis sativus] >KGN58165.1 hypothetical protein Csa_017531 [Cucumis sativus])

HSP 1 Score: 694 bits (1791), Expect = 4.41e-252
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQNPPSTFSDSIGSNKGSSQESSSSHGSSKRTRLLHANQNQTC 60
           MDWGWGKFSGEPIFPENKQNPPSTFSDSIGSNKGSSQESSSSHGSSKRTRLLHANQNQTC
Sbjct: 1   MDWGWGKFSGEPIFPENKQNPPSTFSDSIGSNKGSSQESSSSHGSSKRTRLLHANQNQTC 60

Query: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120
           LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC
Sbjct: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120

Query: 121 RKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVRTE 180
           RKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVRTE
Sbjct: 121 RKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVRTE 180

Query: 181 GEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQIVSSQLSFNQQLPNVISQGS 240
           GEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQIVSSQLSFNQQLPNVISQGS
Sbjct: 181 GEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQIVSSQLSFNQQLPNVISQGS 240

Query: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300
           EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS
Sbjct: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300

Query: 301 LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQSEAPHKFPISWE 344
           LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQSEAPHKFPISWE
Sbjct: 301 LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQSEAPHKFPISWE 344

[Close]

BLAST of CsGy3G023870.1 vs. NCBI nr
Match: XP_008450118.1 (PREDICTED: squamosa promoter-binding-like protein 13A [Cucumis melo])

HSP 1 Score: 676 bits (1744), Expect = 6.45e-245
Identity = 334/344 (97.09%), Postives = 340/344 (98.84%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQNPPSTFSDSIGSNKGSSQESSSSHGSSKRTRLLHANQNQTC 60
           MDW WGKFSGEP FPENKQNPPS+FSDSIGSNKGSSQESSSSHGSSKRTRLLH NQNQTC
Sbjct: 1   MDWVWGKFSGEPNFPENKQNPPSSFSDSIGSNKGSSQESSSSHGSSKRTRLLHGNQNQTC 60

Query: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120
           LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC
Sbjct: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120

Query: 121 RKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVRTE 180
           RKRLDGHNRRRRKPQPESLFMSS DFLSNCKGPIVLQFSDQQIHHVS+EIGRSLWPVRTE
Sbjct: 121 RKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSDQQIHHVSDEIGRSLWPVRTE 180

Query: 181 GEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQIVSSQLSFNQQLPNVISQGS 240
           GEKKSS+VPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQ+VSSQLSFNQQLP+VISQGS
Sbjct: 181 GEKKSSVVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQMVSSQLSFNQQLPDVISQGS 240

Query: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300
           EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS
Sbjct: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300

Query: 301 LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQSEAPHKFPISWE 344
           LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQ+EAPHKFPISWE
Sbjct: 301 LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQNEAPHKFPISWE 344

[Close]

BLAST of CsGy3G023870.1 vs. NCBI nr
Match: KAA0042930.1 (squamosa promoter-binding-like protein 13A [Cucumis melo var. makuwa] >TYK05329.1 squamosa promoter-binding-like protein 13A [Cucumis melo var. makuwa])

HSP 1 Score: 673 bits (1737), Expect = 7.53e-244
Identity = 333/344 (96.80%), Postives = 339/344 (98.55%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQNPPSTFSDSIGSNKGSSQESSSSHGSSKRTRLLHANQNQTC 60
           MDW WGKFSGEP FPENKQNPPS+FSDSIGSNK SSQESSSSHGSSKRTRLLH NQNQTC
Sbjct: 1   MDWVWGKFSGEPNFPENKQNPPSSFSDSIGSNKDSSQESSSSHGSSKRTRLLHGNQNQTC 60

Query: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120
           LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC
Sbjct: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120

Query: 121 RKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVRTE 180
           RKRLDGHNRRRRKPQPESLFMSS DFLSNCKGPIVLQFSDQQIHHVS+EIGRSLWPVRTE
Sbjct: 121 RKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSDQQIHHVSDEIGRSLWPVRTE 180

Query: 181 GEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQIVSSQLSFNQQLPNVISQGS 240
           GEKKSS+VPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQ+VSSQLSFNQQLP+VISQGS
Sbjct: 181 GEKKSSVVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQMVSSQLSFNQQLPDVISQGS 240

Query: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300
           EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS
Sbjct: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300

Query: 301 LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQSEAPHKFPISWE 344
           LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQ+EAPHKFPISWE
Sbjct: 301 LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQNEAPHKFPISWE 344

[Close]

BLAST of CsGy3G023870.1 vs. NCBI nr
Match: XP_038877944.1 (squamosa promoter-binding-like protein 13A [Benincasa hispida])

HSP 1 Score: 622 bits (1603), Expect = 1.05e-221
Identity = 309/349 (88.54%), Postives = 324/349 (92.84%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQNPPSTFSDSIGSNKGSSQESSSSHGSSKRTRLLHANQNQTC 60
           MDWGWGKFSGEPIFPENKQNPPS+FSDSIGSNKGSSQESSSSHGSSKR RLLH +QNQTC
Sbjct: 104 MDWGWGKFSGEPIFPENKQNPPSSFSDSIGSNKGSSQESSSSHGSSKRIRLLHGSQNQTC 163

Query: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120
           LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVV+VRGEEKRFCQQCSRFHSLGEFDEVKRSC
Sbjct: 164 LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVLVRGEEKRFCQQCSRFHSLGEFDEVKRSC 223

Query: 121 RKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVRTE 180
           RKRLDGHNRRRRKPQPESLFMSS+DFLSNCKGPIVLQFSDQQIHHV +E+GRSLWPVRTE
Sbjct: 224 RKRLDGHNRRRRKPQPESLFMSSTDFLSNCKGPIVLQFSDQQIHHVPDELGRSLWPVRTE 283

Query: 181 GEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQIVSSQLSFNQQLPNVISQGS 240
           GE+KSSMVP NSSAYFSYGRGDNK+LPFFLHKNG RQ KQ+VSSQLSFNQQLP+VISQGS
Sbjct: 284 GEEKSSMVPPNSSAYFSYGRGDNKQLPFFLHKNGTRQGKQMVSSQLSFNQQLPDVISQGS 343

Query: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300
           E+ NQKPV TDTS EDSGCALYLLSS  VQAH DAGLS+LVQSHLSVP+QTHETEL FSS
Sbjct: 344 EMGNQKPVPTDTSLEDSGCALYLLSSHQVQAHPDAGLSTLVQSHLSVPIQTHETELDFSS 403

Query: 301 LSDFSGSFDSKDKPVS-----SQLGLEMEEESDGLFQSEAPHKFPISWE 344
            SDFSGSF SKDKPV      S+  LEMEEESDGLF+ EAPHKFPI WE
Sbjct: 404 PSDFSGSFGSKDKPVCKTNLHSESVLEMEEESDGLFRREAPHKFPIYWE 452

[Close]

BLAST of CsGy3G023870.1 vs. NCBI nr
Match: XP_022935263.1 (squamosa promoter-binding-like protein 13A [Cucurbita moschata])

HSP 1 Score: 505 bits (1301), Expect = 2.60e-177
Identity = 274/361 (75.90%), Postives = 297/361 (82.27%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQNPP--STFSDSIGSN--------KGSSQESSSSHGSSKRTR 60
           MDWGWG  SG+P F E    PP  ++FSDSIGS+        +GSSQESSSS+GSSKRTR
Sbjct: 1   MDWGWGTLSGKPTFREKNHTPPPPTSFSDSIGSSNNNEEPILEGSSQESSSSNGSSKRTR 60

Query: 61  LLHANQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSL 120
           +L   QNQ+CLVDGCD+DL NCK+YHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFH L
Sbjct: 61  ILQGTQNQSCLVDGCDSDLKNCKEYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHPL 120

Query: 121 GEFDEVKRSCRKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEI 180
           GEFDEVKRSCRKRLDGHNRRRRKPQPESLFMSS DFLSNCKGPIVLQFS+QQIH V +E 
Sbjct: 121 GEFDEVKRSCRKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSNQQIH-VPDEH 180

Query: 181 GRSLWPVRTEGEKKSSMVPSNSSAYFSYGRG--DNKELPFFLHKNGKRQSKQIVSSQLSF 240
           GRSLW +R E   ++SMVP NSSAYFSYG G  DN+ELPFFLHKNG RQ KQ+VSS+L F
Sbjct: 181 GRSLWSMRPE---ETSMVPPNSSAYFSYGGGGGDNEELPFFLHKNGTRQGKQMVSSRLCF 240

Query: 241 NQQLPNVISQGSEVDNQKP-VTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSV 300
           NQQLP+ ISQGSEV + K  V T+TSP DSGCALYLLSS     H DAGLSSLVQSHLS+
Sbjct: 241 NQQLPDAISQGSEVGSMKQAVPTNTSPVDSGCALYLLSS-----HPDAGLSSLVQSHLSL 300

Query: 301 PVQTHETELHFSSLSDFSGSFDSKDKPVSS---QLGLEME-EESDGLFQSEAPHKFPISW 344
           PVQT ETELHFSSLSDFS SF SKDKPV       GLE+E E SDGLFQSEAPHKFPISW
Sbjct: 301 PVQTPETELHFSSLSDFSASFGSKDKPVCETNLDNGLELEMEASDGLFQSEAPHKFPISW 352

[Close]

BLAST of CsGy3G023870.1 vs. ExPASy TrEMBL
Match: A0A0A0L895 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G567830 PE=4 SV=1)

HSP 1 Score: 694 bits (1791), Expect = 2.14e-252
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQNPPSTFSDSIGSNKGSSQESSSSHGSSKRTRLLHANQNQTC 60
           MDWGWGKFSGEPIFPENKQNPPSTFSDSIGSNKGSSQESSSSHGSSKRTRLLHANQNQTC
Sbjct: 1   MDWGWGKFSGEPIFPENKQNPPSTFSDSIGSNKGSSQESSSSHGSSKRTRLLHANQNQTC 60

Query: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120
           LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC
Sbjct: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120

Query: 121 RKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVRTE 180
           RKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVRTE
Sbjct: 121 RKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVRTE 180

Query: 181 GEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQIVSSQLSFNQQLPNVISQGS 240
           GEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQIVSSQLSFNQQLPNVISQGS
Sbjct: 181 GEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQIVSSQLSFNQQLPNVISQGS 240

Query: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300
           EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS
Sbjct: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300

Query: 301 LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQSEAPHKFPISWE 344
           LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQSEAPHKFPISWE
Sbjct: 301 LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQSEAPHKFPISWE 344

[Close]

BLAST of CsGy3G023870.1 vs. ExPASy TrEMBL
Match: A0A1S3BNK6 (squamosa promoter-binding-like protein 13A OS=Cucumis melo OX=3656 GN=LOC103491800 PE=4 SV=1)

HSP 1 Score: 676 bits (1744), Expect = 3.12e-245
Identity = 334/344 (97.09%), Postives = 340/344 (98.84%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQNPPSTFSDSIGSNKGSSQESSSSHGSSKRTRLLHANQNQTC 60
           MDW WGKFSGEP FPENKQNPPS+FSDSIGSNKGSSQESSSSHGSSKRTRLLH NQNQTC
Sbjct: 1   MDWVWGKFSGEPNFPENKQNPPSSFSDSIGSNKGSSQESSSSHGSSKRTRLLHGNQNQTC 60

Query: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120
           LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC
Sbjct: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120

Query: 121 RKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVRTE 180
           RKRLDGHNRRRRKPQPESLFMSS DFLSNCKGPIVLQFSDQQIHHVS+EIGRSLWPVRTE
Sbjct: 121 RKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSDQQIHHVSDEIGRSLWPVRTE 180

Query: 181 GEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQIVSSQLSFNQQLPNVISQGS 240
           GEKKSS+VPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQ+VSSQLSFNQQLP+VISQGS
Sbjct: 181 GEKKSSVVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQMVSSQLSFNQQLPDVISQGS 240

Query: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300
           EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS
Sbjct: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300

Query: 301 LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQSEAPHKFPISWE 344
           LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQ+EAPHKFPISWE
Sbjct: 301 LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQNEAPHKFPISWE 344

[Close]

BLAST of CsGy3G023870.1 vs. ExPASy TrEMBL
Match: A0A5D3C4M7 (Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001560 PE=4 SV=1)

HSP 1 Score: 673 bits (1737), Expect = 3.64e-244
Identity = 333/344 (96.80%), Postives = 339/344 (98.55%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQNPPSTFSDSIGSNKGSSQESSSSHGSSKRTRLLHANQNQTC 60
           MDW WGKFSGEP FPENKQNPPS+FSDSIGSNK SSQESSSSHGSSKRTRLLH NQNQTC
Sbjct: 1   MDWVWGKFSGEPNFPENKQNPPSSFSDSIGSNKDSSQESSSSHGSSKRTRLLHGNQNQTC 60

Query: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120
           LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC
Sbjct: 61  LVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 120

Query: 121 RKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVRTE 180
           RKRLDGHNRRRRKPQPESLFMSS DFLSNCKGPIVLQFSDQQIHHVS+EIGRSLWPVRTE
Sbjct: 121 RKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSDQQIHHVSDEIGRSLWPVRTE 180

Query: 181 GEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQIVSSQLSFNQQLPNVISQGS 240
           GEKKSS+VPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQ+VSSQLSFNQQLP+VISQGS
Sbjct: 181 GEKKSSVVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQMVSSQLSFNQQLPDVISQGS 240

Query: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300
           EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS
Sbjct: 241 EVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELHFSS 300

Query: 301 LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQSEAPHKFPISWE 344
           LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQ+EAPHKFPISWE
Sbjct: 301 LSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQNEAPHKFPISWE 344

[Close]

BLAST of CsGy3G023870.1 vs. ExPASy TrEMBL
Match: A0A6J1FA23 (squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC111442201 PE=4 SV=1)

HSP 1 Score: 505 bits (1301), Expect = 1.26e-177
Identity = 274/361 (75.90%), Postives = 297/361 (82.27%), Query Frame = 0


Query: 1   MDWGWGKFSGEPIFPENKQNPP--STFSDSIGSN--------KGSSQESSSSHGSSKRTR 60
           MDWGWG  SG+P F E    PP  ++FSDSIGS+        +GSSQESSSS+GSSKRTR
Sbjct: 1   MDWGWGTLSGKPTFREKNHTPPPPTSFSDSIGSSNNNEEPILEGSSQESSSSNGSSKRTR 60

Query: 61  LLHANQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSL 120
           +L   QNQ+CLVDGCD+DL NCK+YHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFH L
Sbjct: 61  ILQGTQNQSCLVDGCDSDLKNCKEYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHPL 120

Query: 121 GEFDEVKRSCRKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEI 180
           GEFDEVKRSCRKRLDGHNRRRRKPQPESLFMSS DFLSNCKGPIVLQFS+QQIH V +E 
Sbjct: 121 GEFDEVKRSCRKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSNQQIH-VPDEH 180

Query: 181 GRSLWPVRTEGEKKSSMVPSNSSAYFSYGRG--DNKELPFFLHKNGKRQSKQIVSSQLSF 240
           GRSLW +R E   ++SMVP NSSAYFSYG G  DN+ELPFFLHKNG RQ KQ+VSS+L F
Sbjct: 181 GRSLWSMRPE---ETSMVPPNSSAYFSYGGGGGDNEELPFFLHKNGTRQGKQMVSSRLCF 240

Query: 241 NQQLPNVISQGSEVDNQKP-VTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSV 300
           NQQLP+ ISQGSEV + K  V T+TSP DSGCALYLLSS     H DAGLSSLVQSHLS+
Sbjct: 241 NQQLPDAISQGSEVGSMKQAVPTNTSPVDSGCALYLLSS-----HPDAGLSSLVQSHLSL 300

Query: 301 PVQTHETELHFSSLSDFSGSFDSKDKPVSS---QLGLEME-EESDGLFQSEAPHKFPISW 344
           PVQT ETELHFSSLSDFS SF SKDKPV       GLE+E E SDGLFQSEAPHKFPISW
Sbjct: 301 PVQTPETELHFSSLSDFSASFGSKDKPVCETNLDNGLELEMEASDGLFQSEAPHKFPISW 352

[Close]

BLAST of CsGy3G023870.1 vs. ExPASy TrEMBL
Match: A0A6J1EL17 (squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC111435296 PE=4 SV=1)

HSP 1 Score: 505 bits (1300), Expect = 1.44e-177
Identity = 272/358 (75.98%), Postives = 298/358 (83.24%), Query Frame = 0


Query: 1   MDWGWGKFSGEPI-FPENKQNPPSTFSDSIGSN------KGSSQESSSSHGSSKRTRLLH 60
           MDWGW KFSGE + F ENKQNP S FSDSIGSN      KGSSQESS+SHGSSKRTRLLH
Sbjct: 1   MDWGWRKFSGERVTFQENKQNPTS-FSDSIGSNNEEQILKGSSQESSTSHGSSKRTRLLH 60

Query: 61  ANQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120
           A+QNQTCLVDGCD+DL+NCK+YHRRHRVCD HSKTPVVMVRGEEKRFCQQCSRFHSLGEF
Sbjct: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120

Query: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRS 180
           DEVKRSCRKRLDGHNRRRRKPQPESLF+SS DFLSNCKGPIVLQFSDQQ+H V +E+GRS
Sbjct: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVH-VPDELGRS 180

Query: 181 LWPVRTEGEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQIVSSQLSFNQQLP 240
           LWP RTE  + SS++PSNSS +FS+G GDNK+LPF   KNG +Q K +VSSQ  FNQQLP
Sbjct: 181 LWPTRTE--ENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLP 240

Query: 241 NVISQGSEVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHE 300
           + ISQ SE D+QK V  + SPEDSGCALYLLSS  VQA  +AGLSSLVQSHLS+PVQT E
Sbjct: 241 DAISQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQE 300

Query: 301 -TELHFSSLSDFSGSFDSKDKPVS------SQLGLEMEEESDGLFQSEAPHKFPISWE 344
            TEL+FSSLSDFS SF SKDK VS      S+LGLEMEEES+GLF        PISWE
Sbjct: 301 ETELNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLF--------PISWE 346

[Close]

BLAST of CsGy3G023870.1 vs. TAIR 10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 153.3 bits (386), Expect = 3.6e-37
Identity = 126/347 (36.31%), Postives = 170/347 (48.99%), Query Frame = 0


Query: 8   FSGEPIFPENKQNPPSTFSD-----SIGSNKGS--SQESSSSHGSSKRTR--LLHANQNQ 67
           FS +     N  N  S F D     S+   K S  ++   S   SSKRTR   +  NQ  
Sbjct: 40  FSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMP 99

Query: 68  TCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKR 127
            CLVDGCD+D +NC++YH+RH+VCD HSKTPVV + G ++RFCQQCSRFH+L EFDE KR
Sbjct: 100 ICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKR 159

Query: 128 SCRKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVR 187
           SCRKRLDGHNRRRRKPQPE +    ++F +  +G  +L+FS       +  +    W   
Sbjct: 160 SCRKRLDGHNRRRRKPQPEHI-GRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW--- 219

Query: 188 TEGEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNG-KRQSKQIVSSQLSFNQQLPNVIS 247
                 S  V +N S   SYG+  +  +     K G         +S  S  +Q P +  
Sbjct: 220 -GNSLVSVAVAANGS---SYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQE 279

Query: 248 QGSEVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELH 307
           + S           +   DS CAL LLSS      S + +  L+Q  LS+  +  ET  +
Sbjct: 280 EESSRTASLCERMTSCIHDSDCALSLLSS------SSSSVPHLLQPPLSLSQEAVETVFY 339

Query: 308 FSSLSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQSEAPHKFPISWE 345
            S L + + S  S    +S    + +            P  FP  WE
Sbjct: 340 GSGLFE-NASAVSDGSVISGNEAVRL------------PQTFPFHWE 359

[Close]

BLAST of CsGy3G023870.1 vs. TAIR 10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 153.3 bits (386), Expect = 3.6e-37
Identity = 126/347 (36.31%), Postives = 170/347 (48.99%), Query Frame = 0


Query: 8   FSGEPIFPENKQNPPSTFSD-----SIGSNKGS--SQESSSSHGSSKRTR--LLHANQNQ 67
           FS +     N  N  S F D     S+   K S  ++   S   SSKRTR   +  NQ  
Sbjct: 40  FSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMP 99

Query: 68  TCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKR 127
            CLVDGCD+D +NC++YH+RH+VCD HSKTPVV + G ++RFCQQCSRFH+L EFDE KR
Sbjct: 100 ICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKR 159

Query: 128 SCRKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVR 187
           SCRKRLDGHNRRRRKPQPE +    ++F +  +G  +L+FS       +  +    W   
Sbjct: 160 SCRKRLDGHNRRRRKPQPEHI-GRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW--- 219

Query: 188 TEGEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNG-KRQSKQIVSSQLSFNQQLPNVIS 247
                 S  V +N S   SYG+  +  +     K G         +S  S  +Q P +  
Sbjct: 220 -GNSLVSVAVAANGS---SYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQE 279

Query: 248 QGSEVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELH 307
           + S           +   DS CAL LLSS      S + +  L+Q  LS+  +  ET  +
Sbjct: 280 EESSRTASLCERMTSCIHDSDCALSLLSS------SSSSVPHLLQPPLSLSQEAVETVFY 339

Query: 308 FSSLSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQSEAPHKFPISWE 345
            S L + + S  S    +S    + +            P  FP  WE
Sbjct: 340 GSGLFE-NASAVSDGSVISGNEAVRL------------PQTFPFHWE 359

[Close]

BLAST of CsGy3G023870.1 vs. TAIR 10
Match: AT5G50570.2 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 153.3 bits (386), Expect = 3.6e-37
Identity = 126/347 (36.31%), Postives = 170/347 (48.99%), Query Frame = 0


Query: 8   FSGEPIFPENKQNPPSTFSD-----SIGSNKGS--SQESSSSHGSSKRTR--LLHANQNQ 67
           FS +     N  N  S F D     S+   K S  ++   S   SSKRTR   +  NQ  
Sbjct: 40  FSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMP 99

Query: 68  TCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKR 127
            CLVDGCD+D +NC++YH+RH+VCD HSKTPVV + G ++RFCQQCSRFH+L EFDE KR
Sbjct: 100 ICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKR 159

Query: 128 SCRKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVR 187
           SCRKRLDGHNRRRRKPQPE +    ++F +  +G  +L+FS       +  +    W   
Sbjct: 160 SCRKRLDGHNRRRRKPQPEHI-GRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW--- 219

Query: 188 TEGEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNG-KRQSKQIVSSQLSFNQQLPNVIS 247
                 S  V +N S   SYG+  +  +     K G         +S  S  +Q P +  
Sbjct: 220 -GNSLVSVAVAANGS---SYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQE 279

Query: 248 QGSEVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQTHETELH 307
           + S           +   DS CAL LLSS      S + +  L+Q  LS+  +  ET  +
Sbjct: 280 EESSRTASLCERMTSCIHDSDCALSLLSS------SSSSVPHLLQPPLSLSQEAVETVFY 339

Query: 308 FSSLSDFSGSFDSKDKPVSSQLGLEMEEESDGLFQSEAPHKFPISWE 345
            S L + + S  S    +S    + +            P  FP  WE
Sbjct: 340 GSGLFE-NASAVSDGSVISGNEAVRL------------PQTFPFHWE 359

[Close]

BLAST of CsGy3G023870.1 vs. TAIR 10
Match: AT1G27370.1 (squamosa promoter binding protein-like 10 )

HSP 1 Score: 126.7 bits (317), Expect = 3.6e-29
Identity = 67/147 (45.58%), Postives = 94/147 (63.95%), Query Frame = 0


Query: 60  CLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRS 119
           C +DGC+ DL++ KDYHR+HRVC++HSK P V+V G E+RFCQQCSRFH++ EFDE KRS
Sbjct: 176 CQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSRFHAVSEFDEKKRS 235

Query: 120 CRKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVRT 179
           CRKRL  HN RRRKPQ   +F  +S+ + + +    + ++   ++  SEE  +  W   T
Sbjct: 236 CRKRLSHHNARRRKPQ--GVFPLNSERVFDRRQHTSMLWNGLSLNTRSEE--KYTW--GT 295

Query: 180 EGEKKSSMVPSNSSAYFSYGRGDNKEL 207
             E K + + S  +  F  G G   +L
Sbjct: 296 TYETKPTQMESGFTLSFQRGNGSEDQL 316

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BLAST of CsGy3G023870.1 vs. TAIR 10
Match: AT1G27370.2 (squamosa promoter binding protein-like 10 )

HSP 1 Score: 126.7 bits (317), Expect = 3.6e-29
Identity = 67/147 (45.58%), Postives = 94/147 (63.95%), Query Frame = 0


Query: 60  CLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRS 119
           C +DGC+ DL++ KDYHR+HRVC++HSK P V+V G E+RFCQQCSRFH++ EFDE KRS
Sbjct: 176 CQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSRFHAVSEFDEKKRS 235

Query: 120 CRKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRSLWPVRT 179
           CRKRL  HN RRRKPQ   +F  +S+ + + +    + ++   ++  SEE  +  W   T
Sbjct: 236 CRKRLSHHNARRRKPQ--GVFPLNSERVFDRRQHTSMLWNGLSLNTRSEE--KYTW--GT 295

Query: 180 EGEKKSSMVPSNSSAYFSYGRGDNKEL 207
             E K + + S  +  F  G G   +L
Sbjct: 296 TYETKPTQMESGFTLSFQRGNGSEDQL 316

The following BLAST results are available for this feature:

BLAST of CsGy3G023870.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DI20	5.0e-36	36.31	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
P0DI11	5.0e-36	36.31	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
Q0J0K1	4.0e-33	65.38	Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q49I55	2.0e-32	57.85	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1	[more]
Q49I57	2.6e-32	57.38	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1	[more]

BLAST of CsGy3G023870.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148013.1	4.41e-252	100.00	squamosa promoter-binding-like protein 13A [Cucumis sativus] >KGN58165.1 hypothe...	[more]
XP_008450118.1	6.45e-245	97.09	PREDICTED: squamosa promoter-binding-like protein 13A [Cucumis melo]	[more]
KAA0042930.1	7.53e-244	96.80	squamosa promoter-binding-like protein 13A [Cucumis melo var. makuwa] >TYK05329....	[more]
XP_038877944.1	1.05e-221	88.54	squamosa promoter-binding-like protein 13A [Benincasa hispida]	[more]
XP_022935263.1	2.60e-177	75.90	squamosa promoter-binding-like protein 13A [Cucurbita moschata]	[more]

BLAST of CsGy3G023870.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L895	2.14e-252	100.00	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G567830 PE...	[more]
A0A1S3BNK6	3.12e-245	97.09	squamosa promoter-binding-like protein 13A OS=Cucumis melo OX=3656 GN=LOC1034918...	[more]
A0A5D3C4M7	3.64e-244	96.80	Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1FA23	1.26e-177	75.90	squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1EL17	1.44e-177	75.98	squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of CsGy3G023870.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50570.1	3.6e-37	36.31	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	3.6e-37	36.31	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.2	3.6e-37	36.31	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT1G27370.1	3.6e-29	45.58	squamosa promoter binding protein-like 10	[more]
AT1G27370.2	3.6e-29	45.58	squamosa promoter binding protein-like 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 52..121 e-value: 2.5E-31 score: 109.6
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 59..139
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 60..133 e-value: 2.1E-30 score: 104.8
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 57..134 score: 31.496038
None	No IPR available	PIRSR	PIRSR037575-1	PIRSR037575-1	coord: 54..133 e-value: 3.2E-35 score: 118.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..49
None	No IPR available	PANTHER	PTHR31251:SF93	TRANSCRIPTION FACTOR SBP FAMILY-RELATED	coord: 33..344
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 33..344

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy3G023870	CsGy3G023870	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G023870.1.exon1	CsGy3G023870.1.exon1	exon
CsGy3G023870.1.exon2	CsGy3G023870.1.exon2	exon
CsGy3G023870.1.exon3	CsGy3G023870.1.exon3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy3G023870.1	cds.CsGy3G023870.1	CDS
cds.CsGy3G023870.1	cds.CsGy3G023870.1_2	CDS
cds.CsGy3G023870.1	cds.CsGy3G023870.1_3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy3G023870.1	CsGy3G023870.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding