CsGy3G022357.1 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G022357.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	ABC transporter
Location	Gy14Chr3: 20758757 .. 20759122 (+)
Sequence length	366
RNA-Seq Expression	CsGy3G022357.1
Synteny	CsGy3G022357.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGATGAGTACGATACATACTGTGGAGAGAGAGGAGCACAGCTATCAGGAGGGCAAAAGCAAAGAATCGCACTGGCTCGAGCAATCCTGAAGAACCCATCAATCCTGCTGCTAGATGAAGCAACAAGCGCACTGGACAGTGTATCAGAGAATTTGGTGCAGGAAGCCCTGGAGAAGATGATGGTTGGCAGAACTTGCATAATCGTAGCTCACCGATTATCGACGATTCAGAAGGCGAACACCATTGCGGTGATCAAGAACGGGAAAGTCGTGGAACAAGGATCGCACAGTGAGCTGATTTCAATGGGGCAACGTGGAGAGTACTATTCTTTGACAAAATCGCAGGCCACATTGAATCTTTGA

mRNA sequence

ATGAAAGATGAGTACGATACATACTGTGGAGAGAGAGGAGCACAGCTATCAGGAGGGCAAAAGCAAAGAATCGCACTGGCTCGAGCAATCCTGAAGAACCCATCAATCCTGCTGCTAGATGAAGCAACAAGCGCACTGGACAGTGTATCAGAGAATTTGGTGCAGGAAGCCCTGGAGAAGATGATGGTTGGCAGAACTTGCATAATCGTAGCTCACCGATTATCGACGATTCAGAAGGCGAACACCATTGCGGTGATCAAGAACGGGAAAGTCGTGGAACAAGGATCGCACAGTGAGCTGATTTCAATGGGGCAACGTGGAGAGTACTATTCTTTGACAAAATCGCAGGCCACATTGAATCTTTGA

Coding sequence (CDS)

ATGAAAGATGAGTACGATACATACTGTGGAGAGAGAGGAGCACAGCTATCAGGAGGGCAAAAGCAAAGAATCGCACTGGCTCGAGCAATCCTGAAGAACCCATCAATCCTGCTGCTAGATGAAGCAACAAGCGCACTGGACAGTGTATCAGAGAATTTGGTGCAGGAAGCCCTGGAGAAGATGATGGTTGGCAGAACTTGCATAATCGTAGCTCACCGATTATCGACGATTCAGAAGGCGAACACCATTGCGGTGATCAAGAACGGGAAAGTCGTGGAACAAGGATCGCACAGTGAGCTGATTTCAATGGGGCAACGTGGAGAGTACTATTCTTTGACAAAATCGCAGGCCACATTGAATCTTTGA

Protein sequence

MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEKMMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATLNL*

Homology

[Close]

BLAST of CsGy3G022357.1 vs. ExPASy Swiss-Prot
Match: Q9LSJ5 (ABC transporter B family member 18 OS=Arabidopsis thaliana OX=3702 GN=ABCB18 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-39
Identity = 80/119 (67.23%), Postives = 102/119 (85.71%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            + + YDT CG+RG QLSGGQKQRIA+ARA+LKNPS+LLLDEATSALDS SE++VQ+ALE+
Sbjct: 1106 LSNGYDTCCGDRGVQLSGGQKQRIAIARAVLKNPSVLLLDEATSALDSQSESVVQDALER 1165

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATL 120
            +MVGRT +++AHRLSTIQK +TIAV++NG VVE G+HS L++ G +G Y+SL   Q TL
Sbjct: 1166 LMVGRTSVVIAHRLSTIQKCDTIAVLENGAVVECGNHSSLLAKGPKGAYFSLVSLQRTL 1224

[Close]

BLAST of CsGy3G022357.1 vs. ExPASy Swiss-Prot
Match: Q9LHD1 (ABC transporter B family member 15 OS=Arabidopsis thaliana OX=3702 GN=ABCB15 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-38
Identity = 78/118 (66.10%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            + + YDTYCG+RG QLSGGQKQRIA+ARA+LKNPS+LLLDEATSALDS SE +VQ+ALE+
Sbjct: 1121 LTEGYDTYCGDRGVQLSGGQKQRIAIARAVLKNPSVLLLDEATSALDSQSERVVQDALER 1180

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQAT 119
            +MVGRT +++AHRLSTIQ  + IAV+  GK+VE+G+HS L+S G  G Y+SL   Q T
Sbjct: 1181 VMVGRTSVVIAHRLSTIQNCDAIAVLDKGKLVERGTHSSLLSKGPTGIYFSLVSLQTT 1238

[Close]

BLAST of CsGy3G022357.1 vs. ExPASy Swiss-Prot
Match: Q9LSJ8 (ABC transporter B family member 16 OS=Arabidopsis thaliana OX=3702 GN=ABCB16 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.2e-38
Identity = 78/116 (67.24%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            + D YDTYCG+RG QLSGGQKQRIA+AR ILKNPSILLLDEATSALDS SE +VQ+ALE 
Sbjct: 1107 LSDGYDTYCGDRGVQLSGGQKQRIAIARTILKNPSILLLDEATSALDSQSERVVQDALEH 1166

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQ 117
            +MVG+T +++AHRLSTIQ  +TIAV+  GKVVE G+H+ L++ G  G Y+SL   Q
Sbjct: 1167 VMVGKTSVVIAHRLSTIQNCDTIAVLDKGKVVESGTHASLLAKGPTGSYFSLVSLQ 1222

[Close]

BLAST of CsGy3G022357.1 vs. ExPASy Swiss-Prot
Match: Q9LSJ2 (ABC transporter B family member 22 OS=Arabidopsis thaliana OX=3702 GN=ABCB22 PE=3 SV=2)

HSP 1 Score: 158.3 bits (399), Expect = 5.5e-38
Identity = 77/118 (65.25%), Postives = 96/118 (81.36%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            + D YDTYCG+RG QLSGGQKQRIA+ARA+LKNPS+LLLDEATSALD+ SE +VQ+AL +
Sbjct: 1110 LSDGYDTYCGDRGVQLSGGQKQRIAIARAVLKNPSVLLLDEATSALDNQSERMVQDALGR 1169

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQAT 119
            +MVGRT +++AHRLSTIQ  +TI V+  GKVVE G+HS L++ G  G Y+SL   Q T
Sbjct: 1170 LMVGRTSVVIAHRLSTIQNCDTITVLDKGKVVECGTHSSLLAKGPTGVYFSLVSLQRT 1227

[Close]

BLAST of CsGy3G022357.1 vs. ExPASy Swiss-Prot
Match: Q6YUU5 (Putative multidrug resistance protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0190300 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-37
Identity = 77/116 (66.38%), Postives = 97/116 (83.62%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            +KD YDT+CGERG QLSGGQKQRIA+ARAILKNP+ILLLDEATSALDS SE +VQEAL++
Sbjct: 1121 LKDGYDTWCGERGVQLSGGQKQRIAIARAILKNPAILLLDEATSALDSQSEKVVQEALDR 1180

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQ 117
            +M+GRT ++VAHRLSTIQ  + I V++ G VVE+G+H+ L++ G  G Y+SL   Q
Sbjct: 1181 VMIGRTSVVVAHRLSTIQNCDLITVLEKGTVVEKGTHASLMAKGLSGTYFSLVNLQ 1236

[Close]

BLAST of CsGy3G022357.1 vs. NCBI nr
Match: KAE8650697.1 (hypothetical protein Csa_010648 [Cucumis sativus])

HSP 1 Score: 231 bits (590), Expect = 1.02e-67
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK
Sbjct: 1129 MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 1188

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATLN 120
            MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATLN
Sbjct: 1189 MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATLN 1248

[Close]

BLAST of CsGy3G022357.1 vs. NCBI nr
Match: XP_031738711.1 (putative multidrug resistance protein [Cucumis sativus])

HSP 1 Score: 231 bits (590), Expect = 1.05e-67
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK
Sbjct: 1145 MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 1204

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATLN 120
            MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATLN
Sbjct: 1205 MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATLN 1264

[Close]

BLAST of CsGy3G022357.1 vs. NCBI nr
Match: XP_038898252.1 (LOW QUALITY PROTEIN: putative multidrug resistance protein [Benincasa hispida])

HSP 1 Score: 229 bits (585), Expect = 4.98e-67
Identity = 120/121 (99.17%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK
Sbjct: 1142 MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 1201

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATLN 120
            MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQA LN
Sbjct: 1202 MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQAALN 1261

[Close]

BLAST of CsGy3G022357.1 vs. NCBI nr
Match: XP_008454545.1 (PREDICTED: putative multidrug resistance protein [Cucumis melo])

HSP 1 Score: 229 bits (584), Expect = 6.69e-67
Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK
Sbjct: 1129 MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 1188

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATLN 120
            MMVGRTCII+AHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQA LN
Sbjct: 1189 MMVGRTCIIIAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQAALN 1248

[Close]

BLAST of CsGy3G022357.1 vs. NCBI nr
Match: TYJ97733.1 (putative multidrug resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 229 bits (584), Expect = 6.69e-67
Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK
Sbjct: 1129 MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 1188

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATLN 120
            MMVGRTCII+AHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQA LN
Sbjct: 1189 MMVGRTCIIIAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQAALN 1248

[Close]

BLAST of CsGy3G022357.1 vs. ExPASy TrEMBL
Match: A0A0A0LBG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G418780 PE=4 SV=1)

HSP 1 Score: 231 bits (590), Expect = 4.00e-68
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK
Sbjct: 1036 MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 1095

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATLN 120
            MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATLN
Sbjct: 1096 MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATLN 1155

[Close]

BLAST of CsGy3G022357.1 vs. ExPASy TrEMBL
Match: A0A5D3BEP9 (Putative multidrug resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00330 PE=4 SV=1)

HSP 1 Score: 229 bits (584), Expect = 3.24e-67
Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK
Sbjct: 1129 MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 1188

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATLN 120
            MMVGRTCII+AHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQA LN
Sbjct: 1189 MMVGRTCIIIAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQAALN 1248

[Close]

BLAST of CsGy3G022357.1 vs. ExPASy TrEMBL
Match: A0A1S3C032 (putative multidrug resistance protein OS=Cucumis melo OX=3656 GN=LOC103494934 PE=4 SV=1)

HSP 1 Score: 229 bits (584), Expect = 3.24e-67
Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK
Sbjct: 1129 MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 1188

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATLN 120
            MMVGRTCII+AHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQA LN
Sbjct: 1189 MMVGRTCIIIAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQAALN 1248

[Close]

BLAST of CsGy3G022357.1 vs. ExPASy TrEMBL
Match: A0A6J1F6K0 (putative multidrug resistance protein OS=Cucurbita moschata OX=3662 GN=LOC111442626 PE=4 SV=1)

HSP 1 Score: 217 bits (553), Expect = 5.31e-63
Identity = 113/117 (96.58%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            MKDEY+TYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK
Sbjct: 1170 MKDEYNTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 1229

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQA 117
            MMV RTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSH+ELISMG+RGEYYSLTKSQA
Sbjct: 1230 MMVNRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHNELISMGRRGEYYSLTKSQA 1286

[Close]

BLAST of CsGy3G022357.1 vs. ExPASy TrEMBL
Match: A0A6J1IMQ5 (putative multidrug resistance protein OS=Cucurbita maxima OX=3661 GN=LOC111476961 PE=4 SV=1)

HSP 1 Score: 217 bits (552), Expect = 7.25e-63
Identity = 112/117 (95.73%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            MKDEY+TYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK
Sbjct: 1170 MKDEYNTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 1229

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQA 117
            MM+ RTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSH+ELISMG+RGEYYSLTKSQA
Sbjct: 1230 MMINRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHNELISMGRRGEYYSLTKSQA 1286

[Close]

BLAST of CsGy3G022357.1 vs. TAIR 10
Match: AT3G28390.1 (P-glycoprotein 18 )

HSP 1 Score: 164.1 bits (414), Expect = 7.1e-41
Identity = 80/119 (67.23%), Postives = 102/119 (85.71%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            + + YDT CG+RG QLSGGQKQRIA+ARA+LKNPS+LLLDEATSALDS SE++VQ+ALE+
Sbjct: 1106 LSNGYDTCCGDRGVQLSGGQKQRIAIARAVLKNPSVLLLDEATSALDSQSESVVQDALER 1165

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATL 120
            +MVGRT +++AHRLSTIQK +TIAV++NG VVE G+HS L++ G +G Y+SL   Q TL
Sbjct: 1166 LMVGRTSVVIAHRLSTIQKCDTIAVLENGAVVECGNHSSLLAKGPKGAYFSLVSLQRTL 1224

[Close]

BLAST of CsGy3G022357.1 vs. TAIR 10
Match: AT3G28345.1 (ABC transporter family protein )

HSP 1 Score: 160.6 bits (405), Expect = 7.9e-40
Identity = 78/118 (66.10%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            + + YDTYCG+RG QLSGGQKQRIA+ARA+LKNPS+LLLDEATSALDS SE +VQ+ALE+
Sbjct: 1121 LTEGYDTYCGDRGVQLSGGQKQRIAIARAVLKNPSVLLLDEATSALDSQSERVVQDALER 1180

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQAT 119
            +MVGRT +++AHRLSTIQ  + IAV+  GK+VE+G+HS L+S G  G Y+SL   Q T
Sbjct: 1181 VMVGRTSVVIAHRLSTIQNCDAIAVLDKGKLVERGTHSSLLSKGPTGIYFSLVSLQTT 1238

[Close]

BLAST of CsGy3G022357.1 vs. TAIR 10
Match: AT3G28360.1 (P-glycoprotein 16 )

HSP 1 Score: 159.1 bits (401), Expect = 2.3e-39
Identity = 78/116 (67.24%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            + D YDTYCG+RG QLSGGQKQRIA+AR ILKNPSILLLDEATSALDS SE +VQ+ALE 
Sbjct: 1107 LSDGYDTYCGDRGVQLSGGQKQRIAIARTILKNPSILLLDEATSALDSQSERVVQDALEH 1166

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQ 117
            +MVG+T +++AHRLSTIQ  +TIAV+  GKVVE G+H+ L++ G  G Y+SL   Q
Sbjct: 1167 VMVGKTSVVIAHRLSTIQNCDTIAVLDKGKVVESGTHASLLAKGPTGSYFSLVSLQ 1222

[Close]

BLAST of CsGy3G022357.1 vs. TAIR 10
Match: AT3G28415.1 (ABC transporter family protein )

HSP 1 Score: 158.3 bits (399), Expect = 3.9e-39
Identity = 77/118 (65.25%), Postives = 96/118 (81.36%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            + D YDTYCG+RG QLSGGQKQRIA+ARA+LKNPS+LLLDEATSALD+ SE +VQ+AL +
Sbjct: 1102 LSDGYDTYCGDRGVQLSGGQKQRIAIARAVLKNPSVLLLDEATSALDNQSERMVQDALGR 1161

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQAT 119
            +MVGRT +++AHRLSTIQ  +TI V+  GKVVE G+HS L++ G  G Y+SL   Q T
Sbjct: 1162 LMVGRTSVVIAHRLSTIQNCDTITVLDKGKVVECGTHSSLLAKGPTGVYFSLVSLQRT 1219

[Close]

BLAST of CsGy3G022357.1 vs. TAIR 10
Match: AT3G28380.1 (P-glycoprotein 17 )

HSP 1 Score: 153.3 bits (386), Expect = 1.3e-37
Identity = 76/119 (63.87%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 1    MKDEYDTYCGERGAQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK 60
            + + YDT CG++G QLSGGQKQRIA+ARA+LKNPS+LLLDEATSALDS SE +VQ+ALE+
Sbjct: 1121 LSNGYDTNCGDKGVQLSGGQKQRIAIARAVLKNPSVLLLDEATSALDSKSERVVQDALER 1180

Query: 61   MMVGRTCIIVAHRLSTIQKANTIAVIKNGKVVEQGSHSELISMGQRGEYYSLTKSQATL 120
            +MVGRT I++AHRLSTIQ  + I V+  GK+VE G+HS L+  G  G Y+SL   Q TL
Sbjct: 1181 VMVGRTSIMIAHRLSTIQNCDMIVVLGKGKIVESGTHSSLLEKGPTGTYFSLAGIQRTL 1239

The following BLAST results are available for this feature:

BLAST of CsGy3G022357.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSJ5	1.0e-39	67.23	ABC transporter B family member 18 OS=Arabidopsis thaliana OX=3702 GN=ABCB18 PE=...	[more]
Q9LHD1	1.1e-38	66.10	ABC transporter B family member 15 OS=Arabidopsis thaliana OX=3702 GN=ABCB15 PE=...	[more]
Q9LSJ8	3.2e-38	67.24	ABC transporter B family member 16 OS=Arabidopsis thaliana OX=3702 GN=ABCB16 PE=...	[more]
Q9LSJ2	5.5e-38	65.25	ABC transporter B family member 22 OS=Arabidopsis thaliana OX=3702 GN=ABCB22 PE=...	[more]
Q6YUU5	1.6e-37	66.38	Putative multidrug resistance protein OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of CsGy3G022357.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650697.1	1.02e-67	100.00	hypothetical protein Csa_010648 [Cucumis sativus]	[more]
XP_031738711.1	1.05e-67	100.00	putative multidrug resistance protein [Cucumis sativus]	[more]
XP_038898252.1	4.98e-67	99.17	LOW QUALITY PROTEIN: putative multidrug resistance protein [Benincasa hispida]	[more]
XP_008454545.1	6.69e-67	98.35	PREDICTED: putative multidrug resistance protein [Cucumis melo]	[more]
TYJ97733.1	6.69e-67	98.35	putative multidrug resistance protein [Cucumis melo var. makuwa]	[more]

BLAST of CsGy3G022357.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBG3	4.00e-68	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G418780 PE=4 SV=1	[more]
A0A5D3BEP9	3.24e-67	98.35	Putative multidrug resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3C032	3.24e-67	98.35	putative multidrug resistance protein OS=Cucumis melo OX=3656 GN=LOC103494934 PE...	[more]
A0A6J1F6K0	5.31e-63	96.58	putative multidrug resistance protein OS=Cucurbita moschata OX=3662 GN=LOC111442...	[more]
A0A6J1IMQ5	7.25e-63	95.73	putative multidrug resistance protein OS=Cucurbita maxima OX=3661 GN=LOC11147696...	[more]

BLAST of CsGy3G022357.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G28390.1	7.1e-41	67.23	P-glycoprotein 18	[more]
AT3G28345.1	7.9e-40	66.10	ABC transporter family protein	[more]
AT3G28360.1	2.3e-39	67.24	P-glycoprotein 16	[more]
AT3G28415.1	3.9e-39	65.25	ABC transporter family protein	[more]
AT3G28380.1	1.3e-37	63.87	P-glycoprotein 17	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 2..117 e-value: 9.8E-61 score: 207.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..116
IPR003439	ABC transporter-like, ATP-binding domain	PFAM	PF00005	ABC_tran	coord: 5..44 e-value: 9.6E-12 score: 45.6
None	No IPR available	PANTHER	PTHR24221:SF245	ABC TRANSPORTER B FAMILY PROTEIN	coord: 1..117
IPR039421	Type 1 protein exporter	PANTHER	PTHR24221	ATP-BINDING CASSETTE SUB-FAMILY B	coord: 1..117

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy3G022357	CsGy3G022357	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G022357.1.exon1	CsGy3G022357.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy3G022357.1	cds.CsGy3G022357.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy3G022357.1	CsGy3G022357.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0016787	hydrolase activity