CsGy3G017355.1 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G017355.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr3: 13335719 .. 13336505 (-)
Sequence length	787
RNA-Seq Expression	CsGy3G017355.1
Synteny	CsGy3G017355.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCACATCGACACCTAATACCATTTTCTTCTTCGAACACCGGCTTAGCTTCACCATACCTCCAGAACCATCTTCTACTTTCTCACCCCTATAAAATCCGCCCACTATCGACCTTCCACTCATAAACCTAACCAAAATGGCGCTCAGGTATTTGGTATCTCGAATGGCCGCCAATGGCTTCAAAACATCATATGAAAGCACAAGAACCTACGCCACGGCGACCACTCCAAGAATGAAATCTTACGCGCCCACGGCCGATTTCTCCCACTTCCATCACCAGAGTAAGCCAAAGGCCTCAAGAGCCGGCGATTTTGTTCCGGTATACGTGGCCATCGGAATGATTGCTCTCTCTGTTGGTCTCGGATTGCACATGGCGAAACAGCAATTGGCTCACTCGCCATCGGTTTCCGTTCGGAAGAAACGGAGAGAGACGATCCCGGAGGTGGTGGAGCCGGAGCACGTGGCGGAGGAGACAGAGAAGTTCTTCGCTAAATCTTTCTTTAGAAAAGTGGCTCACATTCAGGAGGTAGAGAAATTTGGGGACTACAAAGTTCCTTATGATCCTCTGCTCGGCGATGCATATGCTCATCCTCACCGTACTGAGTCGCTGAAGTCCGTGGGAATCGATCCGGCTAGGAACTGAATTGAGTTTTGGTAATTAGGGGATTTTTGGGCCGGGGAATGCGTGTAAATAATAAATAATAATGAAGGTATTATGTGAGAATGTAATATAAATTTTCCGTTCAGGTAAGGAACTTTGATCGTTCAGAATCAATCTGAGATCTCCG

mRNA sequence

TCCACATCGACACCTAATACCATTTTCTTCTTCGAACACCGGCTTAGCTTCACCATACCTCCAGAACCATCTTCTACTTTCTCACCCCTATAAAATCCGCCCACTATCGACCTTCCACTCATAAACCTAACCAAAATGGCGCTCAGGTATTTGGTATCTCGAATGGCCGCCAATGGCTTCAAAACATCATATGAAAGCACAAGAACCTACGCCACGGCGACCACTCCAAGAATGAAATCTTACGCGCCCACGGCCGATTTCTCCCACTTCCATCACCAGAGTAAGCCAAAGGCCTCAAGAGCCGGCGATTTTGTTCCGGTATACGTGGCCATCGGAATGATTGCTCTCTCTGTTGGTCTCGGATTGCACATGGCGAAACAGCAATTGGCTCACTCGCCATCGGTTTCCGTTCGGAAGAAACGGAGAGAGACGATCCCGGAGGTGGTGGAGCCGGAGCACGTGGCGGAGGAGACAGAGAAGTTCTTCGCTAAATCTTTCTTTAGAAAAGTGGCTCACATTCAGGAGGTAGAGAAATTTGGGGACTACAAAGTTCCTTATGATCCTCTGCTCGGCGATGCATATGCTCATCCTCACCGTACTGAGTCGCTGAAGTCCGTGGGAATCGATCCGGCTAGGAACTGAATTGAGTTTTGGTAATTAGGGGATTTTTGGGCCGGGGAATGCGTGTAAATAATAAATAATAATGAAGGTATTATGTGAGAATGTAATATAAATTTTCCGTTCAGGTAAGGAACTTTGATCGTTCAGAATCAATCTGAGATCTCCG

Coding sequence (CDS)

ATGGCGCTCAGGTATTTGGTATCTCGAATGGCCGCCAATGGCTTCAAAACATCATATGAAAGCACAAGAACCTACGCCACGGCGACCACTCCAAGAATGAAATCTTACGCGCCCACGGCCGATTTCTCCCACTTCCATCACCAGAGTAAGCCAAAGGCCTCAAGAGCCGGCGATTTTGTTCCGGTATACGTGGCCATCGGAATGATTGCTCTCTCTGTTGGTCTCGGATTGCACATGGCGAAACAGCAATTGGCTCACTCGCCATCGGTTTCCGTTCGGAAGAAACGGAGAGAGACGATCCCGGAGGTGGTGGAGCCGGAGCACGTGGCGGAGGAGACAGAGAAGTTCTTCGCTAAATCTTTCTTTAGAAAAGTGGCTCACATTCAGGAGGTAGAGAAATTTGGGGACTACAAAGTTCCTTATGATCCTCTGCTCGGCGATGCATATGCTCATCCTCACCGTACTGAGTCGCTGAAGTCCGTGGGAATCGATCCGGCTAGGAACTGA

Protein sequence

MALRYLVSRMAANGFKTSYESTRTYATATTPRMKSYAPTADFSHFHHQSKPKASRAGDFVPVYVAIGMIALSVGLGLHMAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKSFFRKVAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN*

Homology

[Close]

BLAST of CsGy3G017355.1 vs. NCBI nr
Match: XP_011651187.1 (uncharacterized protein LOC105434852 [Cucumis sativus])

HSP 1 Score: 330 bits (845), Expect = 9.47e-114
Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MALRYLVSRMAANGFKTSYESTRTYATATTPRMKSYAPTADFSHFHHQSKPKASRAGDFV 60
           MALRYLVSRMAANGFKTSY STRTYATATTPRMKSYAPTADFSHFHHQSKPKASRAGDFV
Sbjct: 1   MALRYLVSRMAANGFKTSYGSTRTYATATTPRMKSYAPTADFSHFHHQSKPKASRAGDFV 60

Query: 61  PVYVAIGMIALSVGLGLHMAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKS 120
           PVYVAIGMIALSVGLGLH AKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKS
Sbjct: 61  PVYVAIGMIALSVGLGLHTAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKS 120

Query: 121 FFRKVAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168
           FFRKVAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN
Sbjct: 121 FFRKVAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168

[Close]

BLAST of CsGy3G017355.1 vs. NCBI nr
Match: KAE8650469.1 (hypothetical protein Csa_023715, partial [Cucumis sativus])

HSP 1 Score: 323 bits (827), Expect = 4.58e-111
Identity = 162/164 (98.78%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 5   YLVSRMAANGFKTSYESTRTYATATTPRMKSYAPTADFSHFHHQSKPKASRAGDFVPVYV 64
           YLVSRMAANGFKTSY STRTYATATTPRMKSYAPTADFSHFHHQSKPKASRAGDFVPVYV
Sbjct: 1   YLVSRMAANGFKTSYGSTRTYATATTPRMKSYAPTADFSHFHHQSKPKASRAGDFVPVYV 60

Query: 65  AIGMIALSVGLGLHMAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKSFFRK 124
           AIGMIALSVGLGLH AKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKSFFRK
Sbjct: 61  AIGMIALSVGLGLHTAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKSFFRK 120

Query: 125 VAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168
           VAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN
Sbjct: 121 VAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 164

[Close]

BLAST of CsGy3G017355.1 vs. NCBI nr
Match: XP_008439275.1 (PREDICTED: uncharacterized protein LOC103484107 [Cucumis melo] >KAA0033690.1 uncharacterized protein E6C27_scaffold239G001600 [Cucumis melo var. makuwa] >TYK22983.1 uncharacterized protein E5676_scaffold386G00890 [Cucumis melo var. makuwa])

HSP 1 Score: 320 bits (820), Expect = 6.15e-110
Identity = 161/168 (95.83%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MALRYLVSRMAANGFKTSYESTRTYATATTPRMKSYAPTADFSHFHHQSKPKASRAGDFV 60
           MALRYLVSRMAANGF+TS +STRTYATATTPRMKSYAPTADFSHF HQSKPKASRAGDFV
Sbjct: 1   MALRYLVSRMAANGFRTSNKSTRTYATATTPRMKSYAPTADFSHFDHQSKPKASRAGDFV 60

Query: 61  PVYVAIGMIALSVGLGLHMAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKS 120
           PVYVAIGMIALSVGLGLH AKQQLA+SPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKS
Sbjct: 61  PVYVAIGMIALSVGLGLHTAKQQLAYSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKS 120

Query: 121 FFRKVAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168
           FFRKVAH+QEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN
Sbjct: 121 FFRKVAHVQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168

[Close]

BLAST of CsGy3G017355.1 vs. NCBI nr
Match: XP_038877441.1 (uncharacterized protein LOC120069725 [Benincasa hispida])

HSP 1 Score: 291 bits (744), Expect = 2.82e-98
Identity = 150/173 (86.71%), Postives = 156/173 (90.17%), Query Frame = 0


Query: 1   MALRYLVSRMAANGFKTSYESTRTYATATTPRMKSYAPTADFSHFHH-----QSKPKASR 60
           MALRYLV+R AANGF+T+ +S RTY TAT P MKSYAP ADFS F H     QSKPKASR
Sbjct: 1   MALRYLVTRTAANGFRTANKSPRTYTTATAPWMKSYAPAADFSRFDHHHRQQQSKPKASR 60

Query: 61  AGDFVPVYVAIGMIALSVGLGLHMAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEK 120
           AGDFVPVYVAIGMIALSVGLGLH AKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEK
Sbjct: 61  AGDFVPVYVAIGMIALSVGLGLHTAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEK 120

Query: 121 FFAKSFFRKVAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168
           FFAKSFFRKVAH+QEVEKFGDYKVPYDPLLGDAYAH HRTE+LKSVGIDPA N
Sbjct: 121 FFAKSFFRKVAHVQEVEKFGDYKVPYDPLLGDAYAHGHRTETLKSVGIDPASN 173

[Close]

BLAST of CsGy3G017355.1 vs. NCBI nr
Match: XP_022945500.1 (uncharacterized protein LOC111449717 [Cucurbita moschata] >KAG6574202.1 hypothetical protein SDJN03_28089, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013263.1 hypothetical protein SDJN02_26021, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 264 bits (674), Expect = 1.31e-87
Identity = 134/173 (77.46%), Postives = 149/173 (86.13%), Query Frame = 0


Query: 1   MALRYLVSRMAANGFKTSYESTRTYATATTPRMKSYAPTADFSHFHH-----QSKPKASR 60
           MA R+L +R+AAN F+T  +S ++YATAT  RMKSYAP ADFS F H     QSKPKASR
Sbjct: 1   MAFRFLATRLAANSFRTVNKSPKSYATATEARMKSYAPAADFSRFDHNYQQQQSKPKASR 60

Query: 61  AGDFVPVYVAIGMIALSVGLGLHMAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEK 120
           AGDFVPVYVAIG+IALSV LGLH AKQQLAHSPSVSVRKKRRETIPEV EPEHVAEETEK
Sbjct: 61  AGDFVPVYVAIGLIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120

Query: 121 FFAKSFFRKVAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168
           FFAKSFFRKVAH+QE+EK  +Y+VPYDP LGDAYAH HRTE+L+SVG+DPA N
Sbjct: 121 FFAKSFFRKVAHVQELEKLRNYRVPYDPQLGDAYAHRHRTETLRSVGVDPASN 173

[Close]

BLAST of CsGy3G017355.1 vs. ExPASy TrEMBL
Match: A0A0A0L610 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183970 PE=4 SV=1)

HSP 1 Score: 330 bits (845), Expect = 4.59e-114
Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MALRYLVSRMAANGFKTSYESTRTYATATTPRMKSYAPTADFSHFHHQSKPKASRAGDFV 60
           MALRYLVSRMAANGFKTSY STRTYATATTPRMKSYAPTADFSHFHHQSKPKASRAGDFV
Sbjct: 1   MALRYLVSRMAANGFKTSYGSTRTYATATTPRMKSYAPTADFSHFHHQSKPKASRAGDFV 60

Query: 61  PVYVAIGMIALSVGLGLHMAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKS 120
           PVYVAIGMIALSVGLGLH AKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKS
Sbjct: 61  PVYVAIGMIALSVGLGLHTAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKS 120

Query: 121 FFRKVAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168
           FFRKVAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN
Sbjct: 121 FFRKVAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168

[Close]

BLAST of CsGy3G017355.1 vs. ExPASy TrEMBL
Match: A0A5D3DHE3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00890 PE=4 SV=1)

HSP 1 Score: 320 bits (820), Expect = 2.98e-110
Identity = 161/168 (95.83%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MALRYLVSRMAANGFKTSYESTRTYATATTPRMKSYAPTADFSHFHHQSKPKASRAGDFV 60
           MALRYLVSRMAANGF+TS +STRTYATATTPRMKSYAPTADFSHF HQSKPKASRAGDFV
Sbjct: 1   MALRYLVSRMAANGFRTSNKSTRTYATATTPRMKSYAPTADFSHFDHQSKPKASRAGDFV 60

Query: 61  PVYVAIGMIALSVGLGLHMAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKS 120
           PVYVAIGMIALSVGLGLH AKQQLA+SPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKS
Sbjct: 61  PVYVAIGMIALSVGLGLHTAKQQLAYSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKS 120

Query: 121 FFRKVAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168
           FFRKVAH+QEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN
Sbjct: 121 FFRKVAHVQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168

[Close]

BLAST of CsGy3G017355.1 vs. ExPASy TrEMBL
Match: A0A1S3AZ27 (uncharacterized protein LOC103484107 OS=Cucumis melo OX=3656 GN=LOC103484107 PE=4 SV=1)

HSP 1 Score: 320 bits (820), Expect = 2.98e-110
Identity = 161/168 (95.83%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MALRYLVSRMAANGFKTSYESTRTYATATTPRMKSYAPTADFSHFHHQSKPKASRAGDFV 60
           MALRYLVSRMAANGF+TS +STRTYATATTPRMKSYAPTADFSHF HQSKPKASRAGDFV
Sbjct: 1   MALRYLVSRMAANGFRTSNKSTRTYATATTPRMKSYAPTADFSHFDHQSKPKASRAGDFV 60

Query: 61  PVYVAIGMIALSVGLGLHMAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKS 120
           PVYVAIGMIALSVGLGLH AKQQLA+SPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKS
Sbjct: 61  PVYVAIGMIALSVGLGLHTAKQQLAYSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKS 120

Query: 121 FFRKVAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168
           FFRKVAH+QEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN
Sbjct: 121 FFRKVAHVQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168

[Close]

BLAST of CsGy3G017355.1 vs. ExPASy TrEMBL
Match: A0A6J1G139 (uncharacterized protein LOC111449717 OS=Cucurbita moschata OX=3662 GN=LOC111449717 PE=4 SV=1)

HSP 1 Score: 264 bits (674), Expect = 6.34e-88
Identity = 134/173 (77.46%), Postives = 149/173 (86.13%), Query Frame = 0


Query: 1   MALRYLVSRMAANGFKTSYESTRTYATATTPRMKSYAPTADFSHFHH-----QSKPKASR 60
           MA R+L +R+AAN F+T  +S ++YATAT  RMKSYAP ADFS F H     QSKPKASR
Sbjct: 1   MAFRFLATRLAANSFRTVNKSPKSYATATEARMKSYAPAADFSRFDHNYQQQQSKPKASR 60

Query: 61  AGDFVPVYVAIGMIALSVGLGLHMAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEK 120
           AGDFVPVYVAIG+IALSV LGLH AKQQLAHSPSVSVRKKRRETIPEV EPEHVAEETEK
Sbjct: 61  AGDFVPVYVAIGLIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120

Query: 121 FFAKSFFRKVAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168
           FFAKSFFRKVAH+QE+EK  +Y+VPYDP LGDAYAH HRTE+L+SVG+DPA N
Sbjct: 121 FFAKSFFRKVAHVQELEKLRNYRVPYDPQLGDAYAHRHRTETLRSVGVDPASN 173

[Close]

BLAST of CsGy3G017355.1 vs. ExPASy TrEMBL
Match: A0A6J1HUK3 (uncharacterized protein LOC111467595 OS=Cucurbita maxima OX=3661 GN=LOC111467595 PE=4 SV=1)

HSP 1 Score: 261 bits (667), Expect = 7.38e-87
Identity = 134/173 (77.46%), Postives = 148/173 (85.55%), Query Frame = 0


Query: 1   MALRYLVSRMAANGFKTSYESTRTYATATTPRMKSYAPTADFSHFHH-----QSKPKASR 60
           MA RYL +R+AAN F+T  +S ++YATAT  RMKSYAP ADFS F H     QSK KASR
Sbjct: 1   MAFRYLAARVAANSFRTVNKSPKSYATATEARMKSYAPAADFSRFDHDYQQQQSKLKASR 60

Query: 61  AGDFVPVYVAIGMIALSVGLGLHMAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEK 120
           AGDFVPVYVAIG+IALSV LGLH AKQQLAHSPSVSVRKKRRETIPEV EPEHVAEETEK
Sbjct: 61  AGDFVPVYVAIGLIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEK 120

Query: 121 FFAKSFFRKVAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDPARN 168
           FFAKSFFRKVAH+QE+EK  +Y+VPYDP LGDAYAH HRTE+L+SVG+DPA N
Sbjct: 121 FFAKSFFRKVAHVQELEKLRNYRVPYDPQLGDAYAHRHRTETLRSVGVDPASN 173

[Close]

BLAST of CsGy3G017355.1 vs. TAIR 10
Match: AT5G07330.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 115.5 bits (288), Expect = 4.0e-26
Identity = 65/151 (43.05%), Postives = 91/151 (60.26%), Query Frame = 0


Query: 16  KTSYESTRTYATATT-PRMKSYAPTADFSHFHHQSKPKASRAGDFVPVYVAIGMIALSVG 75
           K   +  RTY  ATT PR K+Y+  A        +   A+  GDF PVYV+IG+I+LSV 
Sbjct: 10  KNVVQRLRTYTKATTVPRSKAYSTAATEYGGQRTATTAAATKGDFTPVYVSIGLISLSVT 69

Query: 76  LGLHMAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKSFFRKVAHIQEVEKF 135
            G++ A   L  +P V V KK RET+PE+ +P+ V  E ++F  +S+FRK+AH+QE +K 
Sbjct: 70  FGVYTAYLHLHENPGVRVNKKMRETVPEIEDPDRVLNEADRFANRSWFRKIAHVQEFDK- 129

Query: 136 GDYKVPYDPLLGDAYAHPHRTESLKSVGIDP 166
               V  DP+  D +AH  R  +LK VG+DP
Sbjct: 130 --QDVISDPIRKDQFAHKPRALTLKDVGVDP 157

[Close]

BLAST of CsGy3G017355.1 vs. TAIR 10
Match: AT1G63060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07330.1); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 3.8e-16
Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 0


Query: 48  QSKPKASRAGDFVPVYVAIGMIALSVGLGLHMAKQQLAHSPSVSVRKKRRETIPEVVEPE 107
           Q+  K S  G+F PV +  G + L+V +  H  KQQL H+P++S RK RR  + EV +PE
Sbjct: 32  QTYNKFSIMGEFAPVAIIGGFVGLAVLMAGHSLKQQLMHAPAISTRKNRRAAVAEVDDPE 91

Query: 108 HVAEETEKFFAKSFFRKVAHIQEVEKFGDYKVPYDPLLGDAYAHPHRTESLKSVGIDP 166
           +     +KF  KS+ RKV  IQ+  K     +  DP   + +  P   E+L SVG+ P
Sbjct: 92  NCVSSADKFINKSWLRKVGQIQDKSK----AILSDPTRPNPFTTPRNAETLNSVGVAP 145

The following BLAST results are available for this feature:

BLAST of CsGy3G017355.1 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G017355.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651187.1	9.47e-114	98.81	uncharacterized protein LOC105434852 [Cucumis sativus]	[more]
KAE8650469.1	4.58e-111	98.78	hypothetical protein Csa_023715, partial [Cucumis sativus]	[more]
XP_008439275.1	6.15e-110	95.83	PREDICTED: uncharacterized protein LOC103484107 [Cucumis melo] >KAA0033690.1 unc...	[more]
XP_038877441.1	2.82e-98	86.71	uncharacterized protein LOC120069725 [Benincasa hispida]	[more]
XP_022945500.1	1.31e-87	77.46	uncharacterized protein LOC111449717 [Cucurbita moschata] >KAG6574202.1 hypothet...	[more]

BLAST of CsGy3G017355.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L610	4.59e-114	98.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183970 PE=4 SV=1	[more]
A0A5D3DHE3	2.98e-110	95.83	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AZ27	2.98e-110	95.83	uncharacterized protein LOC103484107 OS=Cucumis melo OX=3656 GN=LOC103484107 PE=...	[more]
A0A6J1G139	6.34e-88	77.46	uncharacterized protein LOC111449717 OS=Cucurbita moschata OX=3662 GN=LOC1114497...	[more]
A0A6J1HUK3	7.38e-87	77.46	uncharacterized protein LOC111467595 OS=Cucurbita maxima OX=3661 GN=LOC111467595...	[more]

BLAST of CsGy3G017355.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07330.1	4.0e-26	43.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G63060.1	3.8e-16	38.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33919:SF11	PROTEIN, PUTATIVE-RELATED	coord: 1..166
None	No IPR available	PANTHER	PTHR33919	OS09G0127700 PROTEIN	coord: 1..166

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy3G017355	CsGy3G017355	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G017355.1.exon1	CsGy3G017355.1.exon1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G017355.1.utr3p1	CsGy3G017355.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy3G017355.1	cds.CsGy3G017355.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G017355.1.utr5p1	CsGy3G017355.1.utr5p1	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy3G017355.1	CsGy3G017355.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane