CsGy3G017285.1 (mRNA) Cucumber (Gy14) v2.1

Overview
NameCsGy3G017285.1
TypemRNA
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 13283158 .. 13283389 (+)
Sequence length232
RNA-Seq ExpressionCsGy3G017285.1
SyntenyCsGy3G017285.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCAATAGACCACGTGGGGACCCACTTGTCCAAGCCATTTCAGACAACGCCCTTTCCCTTCCTTATGTCCATTGTCCATCATCATCACTCATCGCCCATCGCCCATCGCCCATCGCCCATCGCCCCATCCATCTTGCTACCTGGCACCGACTGCCACGCCAGCTGTGCTTTAGTTTCCCCCATTTCTTGTAATTTCACACACCCTTCCCCCGACCCCAATTTCGTAA

mRNA sequence

ATGAAAGCAATAGACCACGTGGGGACCCACTTGTCCAAGCCATTTCAGACAACGCCCTTTCCCTTCCTTATGTCCATTGTCCATCATCATCACTCATCGCCCATCGCCCATCGCCCATCGCCCATCGCCCCATCCATCTTGCTACCTGGCACCGACTGCCACGCCAGCTGTGCTTTAGTTTCCCCCATTTCTTGTAATTTCACACACCCTTCCCCCGACCCCAATTTCGTAA

Coding sequence (CDS)

ATGAAAGCAATAGACCACGTGGGGACCCACTTGTCCAAGCCATTTCAGACAACGCCCTTTCCCTTCCTTATGTCCATTGTCCATCATCATCACTCATCGCCCATCGCCCATCGCCCATCGCCCATCGCCCCATCCATCTTGCTACCTGGCACCGACTGCCACGCCAGCTGTGCTTTAGTTTCCCCCATTTCTTGTAATTTCACACACCCTTCCCCCGACCCCAATTTCGTAA

Protein sequence

MKAIDHVGTHLSKPFQTTPFPFLMSIVHHHHSSPIAHRPSPIAPSILLPGTDCHASCALVSPISCNFTHPSPDPNFVX
Homology
[Close]
BLAST of CsGy3G017285.1 vs. NCBI nr
Match: KAE8650466.1 (hypothetical protein Csa_011528, partial [Cucumis sativus])

HSP 1 Score: 166 bits (420), Expect = 7.63e-52
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MKAIDHVGTHLSKPFQTTPFPFLMSIVHHHHSSPIAHRPSPIAPSILLPGTDCHASCALV 60
          MKAIDHVGTHLSKPFQTTPFPFLMSIVHHHHSSPIAHRPSPIAPSILLPGTDCHASCALV
Sbjct: 1  MKAIDHVGTHLSKPFQTTPFPFLMSIVHHHHSSPIAHRPSPIAPSILLPGTDCHASCALV 60

Query: 61 SPISCNFTHPSPDPNFV 77
          SPISCNFTHPSPDPNFV
Sbjct: 61 SPISCNFTHPSPDPNFV 77

The following BLAST results are available for this feature:
BLAST of CsGy3G017285.1 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G017285.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650466.17.63e-52100.00hypothetical protein Csa_011528, partial [Cucumis sativus][more]
BLAST of CsGy3G017285.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsGy3G017285.1 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy3G017285CsGy3G017285gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy3G017285.1.exon1CsGy3G017285.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.CsGy3G017285.1cds.CsGy3G017285.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy3G017285.1CsGy3G017285.1-proteinpolypeptide