CsGy3G000950.1 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G000950.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Gy14Chr3: 679612 .. 683393 (+)
Sequence length	1553
RNA-Seq Expression	CsGy3G000950.1
Synteny	CsGy3G000950.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATATTTCTTACCCAACCAAATCCCCAAAGTAATCGTCTCTCCACTTCTTCCTCCGTTTGACAAGTGAAGCAGAGCAGTGGCGTAAATCCATGGAGCTTCTTTCACGCTGTTCAACTCTCACTCCTCACGCCTCCTCTCTCGGCCTTCCCAATTCTCATGGAAAACCATCTAATTTCTTCCCCAAGCTCAAATCCACTCTCTCTTTTCCTTCGGCTTCATCAGTACTCAAAACAACCGCTCTTAAACCCTCCAGAACCCTACCTCCGCCGTGCTCCGTTATGACGGCTCCTCAGACGCCGGATGCCGCCCGGAGAGGCGCTGAAACTGACGCCATGGGATTGCTTCTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCATTGATGATTTTGTAGCTGATGCTATTATCAGTCAGCTCTTACTCTTGGATGCCAAGGACTCTACTAAAGATATTAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGGTATTCATGAGCTGATTTTTCGTGCATAACGCAGTAGATATGGAATATGTGATTTAGGCTTGTTTTTGTTCTTCCCAGACGATTTAGGTAACTTGATTTCTACGAATATGCGTTTTTTTGCCTAATTTTGTCGAGATTTTTCTTCACCTGCATCACAAACAGTTAGCCCACTATTTGGTGCATTCATTCATGTGATGACTCTCGTTCTAGAGTTGACATTAATAAACAACCAGCTAAAATAATGCTTAACCATTATCGAATAGATGGAAAAGAATCAGGTAAATCTTTGTAGAGATGCATTTTGTTTGAAGTTTGAAACCTTTGGCTCGTATCCACTTGCAAATCTTCTAACCTCCAGCTGAATAATATAAAAGGCAGATTGGAAGAACCCTTTTTATCTTCGGTTTCGGGAGGAAAAGACTTAGTTCTTCATTTGGACTATGGCTCACAAGAGGCTAAACACTTGTTGGATTAAAAAGAAGAACCCATCCATGGCCTTATCTCCGCCTGTTTGCTCTTCTAATCTAATGAAGAAACGCTCGACCATCTTTTATTTTATTGGGAATATGTTGCACAGAAGATTCACTTGCCATTTTATTTGTCTTGGGCTGGAAACAATTCTACTGATGAAATGAGATGATACATAAAGGTAAACTCATTCAAAAAATTTATCCAGTTGGATATAAAAGAATTTAAGCTGCATATATTAGAAGTATCCATACTTCAAGTAGGAAGCTTTATTTTTAAAAAAAAATTATTGAGTTCTTTTCATTCTAAATCTTCCAAATAACTGCCTTCAACCAATGGGTATTCTATGTTGACCTGAACAGATGATCTATCAGCTGCAAATTTAGCCAATAAAAAATCCCATTTTCTATAAGGGCCAATTTCTCAAATCAGTACTTCTTTGGGAAAGTGCCAACTCCTCCTTCTATGAGAGTAAGCATGTAGACCTAATCAAAGTTCTTTTGAACAAGTAAAAATCCAGGCCTTCTTGTTCATTCTCTATGAGATTCTCAGTGGAGGTGGTGGAAGTTGAAGATACCAAAGGTTCCCTAATTACTACAGTATGGTAGTAATGCATCTATCATCGTTTACCCGTCTCTCCCTTTTCATTTATGGTAAATTTTGAATAACTTGATAAGGGTTGTGAAAAAGAACTGAATTCAGAATGTATGTTGTCAAAATGTCTCATATTATTATCTATTTGTATCATGTTTTTCTTTGCATTTTTTAACACTTAGTCCTCACAGTATAAACTTATAATGAAATCATGTAATCTATATATGTAATATGCAACCAATCTAATTTTATGCATTGGAAACATTCTAGAGTAATTTAATTTAGATTTCTGTGCTTTTTGGATGACCTTTTGATTATCTTCTCTTCGCATCTTTGATGTGCAGCCACTTTCTTTTCTAATGATAAATCTATCATGCACTACAAAACCATAATTGTTCTAAATGTATACTGAAATGTAACTTAAGGATGCCCGTGAGACTTAAGAGTTGACAACTGAAGAAATTATGTGCTTTGCCTAACTCAGTTCATTTTTCAGAAAATGTTATGTTTTTCAGTTCCACAACCACTTATCCTCGTGTTGATAAGGAAAACACCTTCCAACTTTCTCGTATCTCAAACCCAGTTTTTCAATTGTCTATCAAACAGTACCTTCTCAGCCCATTGCCCCACAATTTCGTGCGTGTCAAGCAATCACTTACAATCTCTCCTTTTGTACTAGCAATGGAGTAGATATTGTGAAACACCTAACTCAAAGATGGAATTAAACCAGCTATCTTCCTAGATTCTAAGCTCATTTCCCATTTTATAAAGAAAACCCTGTTCCGACGAACCCATTCATCTAGCTAAATAGGGCCAAGGGCAAAACACAGATTTGCTTAAATAGTTTTATTTGTTTTTTGTATAGCAGAACTTAAAATTTTAGAAGCGGGAGTGTCATATTCACAACTTGTGAATATATGAATCCTCTTGTTATTTGAAGCCTGAATTATTGATTACTAGGCTTTTTAAATAAATAAGTATATTTTGTCTTCCCCTCTCGGTCTTGAGAATTTAGATTAAGAGGACAATCAGTGGTACCTGATCTCATCTAGTTTTGCATCATGTTCTTCGTCACTTTGAAAGTTTATATTTTTCTTAGTTATTTGGTGTTTTGTTGTAGGACATTAGCCTTGATTGACTTTCTTCTATTAATGGTGTTTTTGTTAGTTCTACCATGGCTATCTACGATGTCGTACAGCTTGTGAGGGCTGATGTCTCCACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTTGGCGGTGGCACCAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGAGCGAGTGGGCTAGCATTGGATGTGGAAATTCAAGCACGCGAAATCATGCAGAACAAGGACAACGTTATAAGAATCATCTCTGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCACCCATAGAGGCTGTAGAATATGGATTTATTGATGGAGTAATCGACCAAGACAGCATTATACCGCTCATGCCAGTGCCCGATAAAGTGAAAGGAAAATTCAATTATACAGAAGTTATGAAAGATCCCATGAAGTTCTTGACACCAGACGTTCCTGATGACGAGATATATTAGATTTGGGCGTTCTGGCAAACTTTTCTCTAGGGCTTTGATTTAAATGTTTTACATGTAGGATCTTATGTGTAAGCAAAGTCATGGTGGGTGGAAAGGGAAACCAGAATATGATGGAACTTGATGAGCTAATCATCTTTAGAGTTTCAACTTTTAGCGAAATGTCTCTACTTACCAGAAGTTAAAAAGGTACTTGGAGTTTGGACTCTTTTCTTTGGCTATGACATTCTTCAAATGAGCAAAATGAGGATGGAAAAATTGGTATCGATTTGTATTGGCAGTGTATATTTTTCATACTTTGCTTGATTATCTCTTTCTCCAAACCTCCAAGCATGTTTTTTTTTTTCTTTTTAGTTCAACACAACATAAACCGATGTGAATCGTCTAGTCTCCTAGTTGAACGTGAGGTGTAAGTTCAACCCAAATAACCGACAACACAGACTATCAAATTCATATTATATAAGTTGAGTTGAATATTTTTGTTTGGGTTGAGTTGGGTCTCGGAGGTTGAAGATTTTGGTTCAACCTAACTCAAATTAATATATAATATATAATTTATTTAATAAAAGTAAAGTTAGGAGT

mRNA sequence

TTTATATTTCTTACCCAACCAAATCCCCAAAGTAATCGTCTCTCCACTTCTTCCTCCGTTTGACAAGTGAAGCAGAGCAGTGGCGTAAATCCATGGAGCTTCTTTCACGCTGTTCAACTCTCACTCCTCACGCCTCCTCTCTCGGCCTTCCCAATTCTCATGGAAAACCATCTAATTTCTTCCCCAAGCTCAAATCCACTCTCTCTTTTCCTTCGGCTTCATCAGTACTCAAAACAACCGCTCTTAAACCCTCCAGAACCCTACCTCCGCCGTGCTCCGTTATGACGGCTCCTCAGACGCCGGATGCCGCCCGGAGAGGCGCTGAAACTGACGCCATGGGATTGCTTCTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCATTGATGATTTTGTAGCTGATGCTATTATCAGTCAGCTCTTACTCTTGGATGCCAAGGACTCTACTAAAGATATTAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGTTCTACCATGGCTATCTACGATGTCGTACAGCTTGTGAGGGCTGATGTCTCCACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTTGGCGGTGGCACCAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGAGCGAGTGGGCTAGCATTGGATGTGGAAATTCAAGCACGCGAAATCATGCAGAACAAGGACAACGTTATAAGAATCATCTCTGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCACCCATAGAGGCTGTAGAATATGGATTTATTGATGGAGTAATCGACCAAGACAGCATTATACCGCTCATGCCAGTGCCCGATAAAGTGAAAGGAAAATTCAATTATACAGAAGTTATGAAAGATCCCATGAAGTTCTTGACACCAGACGTTCCTGATGACGAGATATATTAGATTTGGGCGTTCTGGCAAACTTTTCTCTAGGGCTTTGATTTAAATGTTTTACATGTAGGATCTTATGTGTAAGCAAAGTCATGGTGGGTGGAAAGGGAAACCAGAATATGATGGAACTTGATGAGCTAATCATCTTTAGAGTTTCAACTTTTAGCGAAATGTCTCTACTTACCAGAAGTTAAAAAGGTACTTGGAGTTTGGACTCTTTTCTTTGGCTATGACATTCTTCAAATGAGCAAAATGAGGATGGAAAAATTGGTATCGATTTGTATTGGCAGTGTATATTTTTCATACTTTGCTTGATTATCTCTTTCTCCAAACCTCCAAGCATGTTTTTTTTTTTCTTTTTAGTTCAACACAACATAAACCGATGTGAATCGTCTAGTCTCCTAGTTGAACGTGAGGTGTAAGTTCAACCCAAATAACCGACAACACAGACTATCAAATTCATATTATATAAGTTGAGTTGAATATTTTTGTTTGGGTTGAGTTGGGTCTCGGAGGTTGAAGATTTTGGTTCAACCTAACTCAAATTAATATATAATATATAATTTATTTAATAAAAGTAAAGTTAGGAGT

Coding sequence (CDS)

ATGGAGCTTCTTTCACGCTGTTCAACTCTCACTCCTCACGCCTCCTCTCTCGGCCTTCCCAATTCTCATGGAAAACCATCTAATTTCTTCCCCAAGCTCAAATCCACTCTCTCTTTTCCTTCGGCTTCATCAGTACTCAAAACAACCGCTCTTAAACCCTCCAGAACCCTACCTCCGCCGTGCTCCGTTATGACGGCTCCTCAGACGCCGGATGCCGCCCGGAGAGGCGCTGAAACTGACGCCATGGGATTGCTTCTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCATTGATGATTTTGTAGCTGATGCTATTATCAGTCAGCTCTTACTCTTGGATGCCAAGGACTCTACTAAAGATATTAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGTTCTACCATGGCTATCTACGATGTCGTACAGCTTGTGAGGGCTGATGTCTCCACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTTGGCGGTGGCACCAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGAGCGAGTGGGCTAGCATTGGATGTGGAAATTCAAGCACGCGAAATCATGCAGAACAAGGACAACGTTATAAGAATCATCTCTGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCACCCATAGAGGCTGTAGAATATGGATTTATTGATGGAGTAATCGACCAAGACAGCATTATACCGCTCATGCCAGTGCCCGATAAAGTGAAAGGAAAATTCAATTATACAGAAGTTATGAAAGATCCCATGAAGTTCTTGACACCAGACGTTCCTGATGACGAGATATATTAG

Protein sequence

MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCSVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKDIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY*

Homology

[Close]

BLAST of CsGy3G000950.1 vs. ExPASy Swiss-Prot
Match: Q94B60 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP4 PE=1 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 3.9e-98
Identity = 201/295 (68.14%), Postives = 229/295 (77.63%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPS--ASSVLKTTALKPSRTLP 60
           M  LS  S+L P   S  L +S    S+ FPK  +    P+   S  L+TT+  P R   
Sbjct: 1   MGTLSLSSSLKPSLVSSRLNSSSSASSSSFPKPNNLYLKPTKLISPPLRTTSPSPLRFAN 60

Query: 61  PPCSVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDST 120
              + +   QT ++A RGAE+D MGLLLRERIVFLG+SIDDFVADAI+SQLLLLDAKD  
Sbjct: 61  ---ASIEMSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPK 120

Query: 121 KDIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPN 180
           KDI+LFINS GGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN
Sbjct: 121 KDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPN 180

Query: 181 ARIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSP 240
            RIM+HQPLGGASG A+DVEIQA+E+M NK+NV  II+  T   FE+V KDIDRDRYMSP
Sbjct: 181 TRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSP 240

Query: 241 IEAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 294
           IEAVEYG IDGVID DSIIPL PVPD+VK + NY E+ KDPMKFLTP++PDDEIY
Sbjct: 241 IEAVEYGLIDGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEIY 292

[Close]

BLAST of CsGy3G000950.1 vs. ExPASy Swiss-Prot
Match: Q3ANI8 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) OX=110662 GN=clpP1 PE=3 SV=2)

HSP 1 Score: 204.1 bits (518), Expect = 2.1e-51
Identity = 101/187 (54.01%), Postives = 139/187 (74.33%), Query Frame = 0


Query: 67  PQTPDAARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKDIRLFI 126
           P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++I
Sbjct: 10  PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYI 69

Query: 127 NSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 186
           NS GGS+++ +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+PNARIM+HQ
Sbjct: 70  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQ 129

Query: 187 PLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 246
           PLGGA G A+D+EIQA+EI+  K+ +  +++E TG P +K+ +D DRD ++SP EAVEYG
Sbjct: 130 PLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSPAEAVEYG 189

Query: 247 FIDGVID 253
            ID V+D
Sbjct: 190 LIDRVVD 196

[Close]

BLAST of CsGy3G000950.1 vs. ExPASy Swiss-Prot
Match: Q3B0U1 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) OX=316279 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.6e-51
Identity = 100/187 (53.48%), Postives = 139/187 (74.33%), Query Frame = 0


Query: 67  PQTPDAARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKDIRLFI 126
           P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI++++
Sbjct: 10  PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYV 69

Query: 127 NSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 186
           NS GGS+++ +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+PNARIM+HQ
Sbjct: 70  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQ 129

Query: 187 PLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 246
           PLGGA G A+D+EIQA+EI+  K+ +  +++E TG P +K+ +D DRD ++SP EAVEYG
Sbjct: 130 PLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYFLSPAEAVEYG 189

Query: 247 FIDGVID 253
            ID V+D
Sbjct: 190 LIDRVVD 196

[Close]

BLAST of CsGy3G000950.1 vs. ExPASy Swiss-Prot
Match: Q7V992 (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 4.0e-50
Identity = 102/195 (52.31%), Postives = 140/195 (71.79%), Query Frame = 0


Query: 59  PPCSVMTAPQTPDAARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDS 118
           P  S    P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D 
Sbjct: 19  PVSSPGILPTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDP 78

Query: 119 TKDIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMP 178
            KDI+++INS GGS+++ +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+P
Sbjct: 79  EKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALP 138

Query: 179 NARIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMS 238
           NARIM+HQPLGGA G A+D+EIQA+EI+  K+ +  +++E TG P  K+ +D DRD ++S
Sbjct: 139 NARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLNKIAEDTDRDHFLS 198

Query: 239 PIEAVEYGFIDGVID 253
           P +AVEYG ID V+D
Sbjct: 199 PAKAVEYGLIDRVVD 213

[Close]

BLAST of CsGy3G000950.1 vs. ExPASy Swiss-Prot
Match: Q7UA36 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain WH8102) OX=84588 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.2e-49
Identity = 98/187 (52.41%), Postives = 138/187 (73.80%), Query Frame = 0


Query: 67  PQTPDAARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKDIRLFI 126
           P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++I
Sbjct: 27  PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYI 86

Query: 127 NSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 186
           NS GGS+++ +AIYD +Q V  DV TI  G+AAS  + +L GG KGKRLA+PNARIM+HQ
Sbjct: 87  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGCKGKRLALPNARIMIHQ 146

Query: 187 PLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 246
           PLGGA G A+D+EIQA+EI+  K+ +  ++++ TG P +K+ +D DRD ++SP EAV+YG
Sbjct: 147 PLGGAQGQAVDIEIQAKEILFLKETLNGLMADHTGQPLDKIAEDTDRDYFLSPAEAVQYG 206

Query: 247 FIDGVID 253
            ID V+D
Sbjct: 207 LIDRVVD 213

[Close]

BLAST of CsGy3G000950.1 vs. NCBI nr
Match: XP_004146125.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis sativus] >KGN55689.1 hypothetical protein Csa_010517 [Cucumis sativus])

HSP 1 Score: 562 bits (1449), Expect = 1.14e-201
Identity = 292/293 (99.66%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP
Sbjct: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CSVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKD 120
           CSVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKD
Sbjct: 61  CSVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKD 120

Query: 121 IRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR 180
           IRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR
Sbjct: 121 IRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR 180

Query: 181 IMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIE 240
           IMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIE
Sbjct: 181 IMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIE 240

Query: 241 AVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 293
           AVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEI+
Sbjct: 241 AVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIF 293

[Close]

BLAST of CsGy3G000950.1 vs. NCBI nr
Match: XP_008448589.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis melo])

HSP 1 Score: 523 bits (1346), Expect = 5.68e-186
Identity = 271/293 (92.49%), Postives = 281/293 (95.90%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTL P ASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP
Sbjct: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CSVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKD 120
           CSVMTAPQTPDA+RRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTKD
Sbjct: 61  CSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKD 120

Query: 121 IRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR 180
           IRLFINSAGGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR
Sbjct: 121 IRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR 180

Query: 181 IMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIE 240
           IMVHQPLGGASG A+DVEIQAREIM NK+NV RIISEFTGHPFEKVQKDIDRDRYMSPIE
Sbjct: 181 IMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIE 240

Query: 241 AVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 293
           AVEYG IDGVID+DSIIPL+PVP++VK   NY E+ KDP KFLTPDVPDDEIY
Sbjct: 241 AVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY 293

[Close]

BLAST of CsGy3G000950.1 vs. NCBI nr
Match: XP_038876611.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 509 bits (1311), Expect = 1.27e-180
Identity = 267/294 (90.82%), Postives = 276/294 (93.88%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTL PHASS+GLP SHGKPSNF PKLKSTLSFPSASSVLKTTA KPSRT  PP
Sbjct: 1   MELLSRCSTLLPHASSIGLPTSHGKPSNFLPKLKSTLSFPSASSVLKTTAPKPSRTPAPP 60

Query: 61  CSV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120
           CSV MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTK
Sbjct: 61  CSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINSAGGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASG A+DVEIQAREIM NK+NV RIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 293
           EAVEYG IDGVID+DSIIPLMPVP++VK   NY E+ KDP KFL PDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPTKFLNPDVPDDEIY 294

[Close]

BLAST of CsGy3G000950.1 vs. NCBI nr
Match: KAG7015794.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 502 bits (1293), Expect = 7.01e-178
Identity = 262/294 (89.12%), Postives = 277/294 (94.22%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTL PHASSLGL NSHGKPSNF+PKLKS+LSFPSASSVLKTTA KPSRTL P 
Sbjct: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPS 60

Query: 61  CSV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120
           CSV MT PQTPDAA+RGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTK
Sbjct: 61  CSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS+GGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASG A+DVEIQAREIM NK+N+ RIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 293
           EAVEYG IDGVID+DSIIPL+PVP++VK   NY E+ KDP KFL+PDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY 294

[Close]

BLAST of CsGy3G000950.1 vs. NCBI nr
Match: XP_022145352.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica charantia])

HSP 1 Score: 501 bits (1289), Expect = 2.85e-177
Identity = 262/294 (89.12%), Postives = 273/294 (92.86%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTL PHASSL LPNSH KPSNF+PKLKS+LSFPSA SVLK TALKPSRTL  P
Sbjct: 1   MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASP 60

Query: 61  CSV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120
           CSV MTAPQTPD ARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTK
Sbjct: 61  CSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLS+TMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIGLGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASG A+DVEIQAREIM NK+NV RIISEFTGHPF+KVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 293
           EAVEYG IDGVID+DSIIPLMPVP++VK   NY E+ KDP KFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 294

[Close]

BLAST of CsGy3G000950.1 vs. ExPASy TrEMBL
Match: A0A0A0L3S1 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_3G005040 PE=3 SV=1)

HSP 1 Score: 562 bits (1449), Expect = 5.52e-202
Identity = 292/293 (99.66%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP
Sbjct: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CSVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKD 120
           CSVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKD
Sbjct: 61  CSVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKD 120

Query: 121 IRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR 180
           IRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR
Sbjct: 121 IRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR 180

Query: 181 IMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIE 240
           IMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIE
Sbjct: 181 IMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIE 240

Query: 241 AVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 293
           AVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEI+
Sbjct: 241 AVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIF 293

[Close]

BLAST of CsGy3G000950.1 vs. ExPASy TrEMBL
Match: A0A1S3BJF4 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103490719 PE=3 SV=1)

HSP 1 Score: 523 bits (1346), Expect = 2.75e-186
Identity = 271/293 (92.49%), Postives = 281/293 (95.90%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTL P ASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP
Sbjct: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CSVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKD 120
           CSVMTAPQTPDA+RRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTKD
Sbjct: 61  CSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKD 120

Query: 121 IRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR 180
           IRLFINSAGGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR
Sbjct: 121 IRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR 180

Query: 181 IMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIE 240
           IMVHQPLGGASG A+DVEIQAREIM NK+NV RIISEFTGHPFEKVQKDIDRDRYMSPIE
Sbjct: 181 IMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIE 240

Query: 241 AVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 293
           AVEYG IDGVID+DSIIPL+PVP++VK   NY E+ KDP KFLTPDVPDDEIY
Sbjct: 241 AVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY 293

[Close]

BLAST of CsGy3G000950.1 vs. ExPASy TrEMBL
Match: A0A6J1CWB9 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111014827 PE=3 SV=1)

HSP 1 Score: 501 bits (1289), Expect = 1.38e-177
Identity = 262/294 (89.12%), Postives = 273/294 (92.86%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTL PHASSL LPNSH KPSNF+PKLKS+LSFPSA SVLK TALKPSRTL  P
Sbjct: 1   MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASP 60

Query: 61  CSV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120
           CSV MTAPQTPD ARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTK
Sbjct: 61  CSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLS+TMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIGLGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASG A+DVEIQAREIM NK+NV RIISEFTGHPF+KVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 293
           EAVEYG IDGVID+DSIIPLMPVP++VK   NY E+ KDP KFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 294

[Close]

BLAST of CsGy3G000950.1 vs. ExPASy TrEMBL
Match: A0A6J1EC18 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111431188 PE=3 SV=1)

HSP 1 Score: 499 bits (1285), Expect = 3.09e-176
Identity = 261/294 (88.78%), Postives = 276/294 (93.88%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTL PHASSLGL NSHGKPSNF+PKLKS+LSFPSASSVLKTTA KPSRTL   
Sbjct: 48  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLATS 107

Query: 61  CSV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120
           CSV MT PQTPDAA+RGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTK
Sbjct: 108 CSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 167

Query: 121 DIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS+GGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 168 DIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 227

Query: 181 RIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASG A+DVEIQAREIM NK+N+ RIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 228 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 287

Query: 241 EAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 293
           EAVEYG IDGVID+DSIIPL+PVP++VK   NY E+ KDP KFL+PDVPDDEIY
Sbjct: 288 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY 341

[Close]

BLAST of CsGy3G000950.1 vs. ExPASy TrEMBL
Match: A0A6J1HNH6 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111465249 PE=3 SV=1)

HSP 1 Score: 492 bits (1267), Expect = 3.10e-174
Identity = 258/294 (87.76%), Postives = 273/294 (92.86%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTL PHASSLGL NSHGKPSNF+PKLKS LSFPSASSVLKTTA KPSRTL   
Sbjct: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSGLSFPSASSVLKTTARKPSRTLATS 60

Query: 61  CSV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120
            SV MT PQTPDAA+RGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTK
Sbjct: 61  SSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS+GGSLS+TMAIYDV+QLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIYDVIQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASG A+DVEIQAREIM NK+N+ RIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 293
           EAVEYG IDGVID+DSIIPL+PVP++VK   NY E+ KDP KF +PDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFFSPDVPDDEIY 294

[Close]

BLAST of CsGy3G000950.1 vs. TAIR 10
Match: AT5G45390.1 (CLP protease P4 )

HSP 1 Score: 359.4 bits (921), Expect = 2.8e-99
Identity = 201/295 (68.14%), Postives = 229/295 (77.63%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPS--ASSVLKTTALKPSRTLP 60
           M  LS  S+L P   S  L +S    S+ FPK  +    P+   S  L+TT+  P R   
Sbjct: 1   MGTLSLSSSLKPSLVSSRLNSSSSASSSSFPKPNNLYLKPTKLISPPLRTTSPSPLRFAN 60

Query: 61  PPCSVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDST 120
              + +   QT ++A RGAE+D MGLLLRERIVFLG+SIDDFVADAI+SQLLLLDAKD  
Sbjct: 61  ---ASIEMSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPK 120

Query: 121 KDIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPN 180
           KDI+LFINS GGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN
Sbjct: 121 KDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPN 180

Query: 181 ARIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSP 240
            RIM+HQPLGGASG A+DVEIQA+E+M NK+NV  II+  T   FE+V KDIDRDRYMSP
Sbjct: 181 TRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSP 240

Query: 241 IEAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 294
           IEAVEYG IDGVID DSIIPL PVPD+VK + NY E+ KDPMKFLTP++PDDEIY
Sbjct: 241 IEAVEYGLIDGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEIY 292

[Close]

BLAST of CsGy3G000950.1 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 )

HSP 1 Score: 195.7 bits (496), Expect = 5.3e-50
Identity = 98/203 (48.28%), Postives = 138/203 (67.98%), Query Frame = 0


Query: 62  SVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKDI 121
           S+ +  Q+P       E D   +LLR+RIVFLG+ +DD  AD +ISQLLLLDA+DS +DI
Sbjct: 67  SIDSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDI 126

Query: 122 RLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARI 181
            LFINS GGS+++ M IYD ++  +ADVST+ LG+AAS  + +L  G+KGKR  MPN+++
Sbjct: 127 TLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKV 186

Query: 182 MVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEA 241
           M+HQPLG A G A ++ I+ RE+M +K  + +I S  TG P  +++ D DRD +++P EA
Sbjct: 187 MIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEA 246

Query: 242 VEYGFIDGVIDQDSIIPLMPVPD 265
            EYG ID VID      + P+ D
Sbjct: 247 KEYGLIDAVIDDGKPGLIAPIGD 269

[Close]

BLAST of CsGy3G000950.1 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 171.8 bits (434), Expect = 8.3e-43
Identity = 84/167 (50.30%), Postives = 122/167 (73.05%), Query Frame = 0


Query: 85  LLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKDIRLFINSAGGSLSSTMAIYDVVQL 144
           L + RI+  G ++DD +A+ I++QLL LDA D TKDI +++NS GGS+++ MAI+D ++ 
Sbjct: 119 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH 178

Query: 145 VRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGLALDVEIQAREI 204
           +R DVST+ +G+AAS  + +L  GTKGKR ++PN+RIM+HQPLGGA G   D++IQA E+
Sbjct: 179 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 238

Query: 205 MQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGFIDGVI 252
           + +K N+   ++  TG   EK+ +D DRD +MS  EA EYG IDGVI
Sbjct: 239 LHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285

[Close]

BLAST of CsGy3G000950.1 vs. TAIR 10
Match: AT1G11750.1 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-38
Identity = 78/188 (41.49%), Postives = 115/188 (61.17%), Query Frame = 0


Query: 67  PQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKDIRLFIN 126
           P  P     G   D   +L R RI+F+G  I+  VA  +ISQL+ L + D   DI +++N
Sbjct: 83  PVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLN 142

Query: 127 SAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQP 186
             GGS  S +AIYD +  ++  V T+A G+AAS  +++L GG KG R AMPN R+M+HQP
Sbjct: 143 CPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQP 202

Query: 187 LGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGF 246
             G  G   DV  Q  E ++ +  + R+ + FTG P EKVQ+  +RDR++S  EA+E+G 
Sbjct: 203 QTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGL 262

Query: 247 IDGVIDQD 255
           IDG+++ +
Sbjct: 263 IDGLLETE 270

[Close]

BLAST of CsGy3G000950.1 vs. TAIR 10
Match: AT1G11750.2 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 155.2 bits (391), Expect = 8.0e-38
Identity = 95/253 (37.55%), Postives = 142/253 (56.13%), Query Frame = 0


Query: 11  TPHASSL--GL-PNSHGKPSNFFPKLKSTLSFPSASSVLKTT------ALKPSRTLPPPC 70
           +P+  SL  GL  N  G P     K  S+L  P  + +  +T       ++  +  PP  
Sbjct: 44  SPYGDSLKAGLSSNVSGSPIKIDNKAPSSLPLPILNILKSSTVYFIFGVIEAKKGNPP-- 103

Query: 71  SVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKDI 130
            VM +  TP     G   D   +L R RI+F+G  I+  VA  +ISQL+ L + D   DI
Sbjct: 104 -VMPSVMTP-----GGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDI 163

Query: 131 RLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARI 190
            +++N  GGS  S +AIYD +  ++  V T+A G+AAS  +++L GG KG R AMPN R+
Sbjct: 164 LMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRV 223

Query: 191 MVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEA 250
           M+HQP  G  G   DV  Q  E ++ +  + R+ + FTG P EKVQ+  +RDR++S  EA
Sbjct: 224 MIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEA 283

Query: 251 VEYGFIDGVIDQD 255
           +E+G IDG+++ +
Sbjct: 284 LEFGLIDGLLETE 288

The following BLAST results are available for this feature:

BLAST of CsGy3G000950.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94B60	3.9e-98	68.14	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis t...	[more]
Q3ANI8	2.1e-51	54.01	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC...	[more]
Q3B0U1	3.6e-51	53.48	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC...	[more]
Q7V992	4.0e-50	52.31	ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (str...	[more]
Q7UA36	1.2e-49	52.41	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain WH...	[more]

BLAST of CsGy3G000950.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146125.1	1.14e-201	99.66	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis sativus...	[more]
XP_008448589.1	5.68e-186	92.49	PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucu...	[more]
XP_038876611.1	1.27e-180	90.82	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Benincasa hispi...	[more]
KAG7015794.1	7.01e-178	89.12	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyr...	[more]
XP_022145352.1	2.85e-177	89.12	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica chara...	[more]

BLAST of CsGy3G000950.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3S1	5.52e-202	99.66	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A1S3BJF4	2.75e-186	92.49	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1CWB9	1.38e-177	89.12	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1EC18	3.09e-176	88.78	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1HNH6	3.10e-174	87.76	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of CsGy3G000950.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45390.1	2.8e-99	68.14	CLP protease P4	[more]
AT1G66670.1	5.3e-50	48.28	CLP protease proteolytic subunit 3	[more]
AT1G02560.1	8.3e-43	50.30	nuclear encoded CLP protease 5	[more]
AT1G11750.1	1.6e-38	41.49	CLP protease proteolytic subunit 6	[more]
AT1G11750.2	8.0e-38	37.55	CLP protease proteolytic subunit 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 172..191 score: 57.75 coord: 229..248 score: 53.38 coord: 120..140 score: 53.21 coord: 80..95 score: 46.88 coord: 151..168 score: 50.56
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 65..254 score: 36.083122
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 80..250 e-value: 3.61452E-95 score: 276.245
None	No IPR available	GENE3D	3.90.226.10		coord: 61..256 e-value: 4.8E-67 score: 227.5
None	No IPR available	PANTHER	PTHR10381:SF24	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 4, CHLOROPLASTIC	coord: 62..290
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 79..253 e-value: 2.5E-69 score: 232.8
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 62..290
IPR033135	ClpP, histidine active site	PROSITE	PS00382	CLP_PROTEASE_HIS	coord: 173..186
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 79..256

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy3G000950	CsGy3G000950	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G000950.1.utr5p1	CsGy3G000950.1.utr5p1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G000950.1.exon1	CsGy3G000950.1.exon1	exon
CsGy3G000950.1.exon2	CsGy3G000950.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy3G000950.1	cds.CsGy3G000950.1	CDS
cds.CsGy3G000950.1	cds.CsGy3G000950.1_2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G000950.1.utr3p1	CsGy3G000950.1.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy3G000950.1	CsGy3G000950.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009368	endopeptidase Clp complex
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0051117	ATPase binding