CsGy3G000560.1 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G000560.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	F-box protein
Location	Gy14Chr3: 413216 .. 416115 (+)
Sequence length	1429
RNA-Seq Expression	CsGy3G000560.1
Synteny	CsGy3G000560.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCGTGAAATTCAAATAAAGATGAAACCCTAGCCCCTCTTTCACTTCTCGTCCCTATTTTCCCTCCCTTCCTCTCTCTCTCTCTCTCTCTAACTCGTTCTCGTTCTGCGCATTTCGAGGAATTTATCCTGAACTCTCTCGATTCCGAGGTTTTGTTTTGTTTTGATTTAATTCATTTTCGTTTTCTCTGTTTTGATTTTGTTCCCCATTTCGATTCTTGCTCCGTTTCTTGTGTGTTTTCGATTTGTAATCACTTGCTCGTCTTGAGGGGATTTGGGTTGTATTTTTTAAAAACTGTTTTTGAGGTGGGTTTTTTCTTTTTTCTTTTTTGAATGTTCAAGAAGTTGTTTCTTGGGGTTTTAAGTTTCTTCGGTGGTTAATGAAATGGGAAGTGTTTTGAATTTTATATGGCAGGTTATGTTGATGGGTTGGGTTTAATTATTGATGTTGAGGGTTTATTGGAGGAGTAGAAAAAAGGCGTTTGTTTGTGGTTGCTGTAAATTGGGGAAATCGAGGAAGGGATGGGGAAGGTGTTTACGAATGATAGGGAGCCAAAGAAATTGAAGCGGAGAAGGAGGTCGAAGGGTTCTGGTGGGAAGTATTTGAAGCCGGGTGCTTTGGCGAAGCTCAGGTGTAGCAAGGGTTCGGTTGCTAAATCTTGTACTGATCTTGGGAGGAAGAGGGTGGCTGTGTTGGATGCTGGGAAGACGAAGAGGAATGTAGTGCTTGAGGATAAGGTTTCTGATAGAAGTCCTTTGATGTTGTCACCTGTGAAATTGGTGATGCATATAAACCATATTGGTACTCCAAAAACCCCTCGGGTTGAAGACTGTGAATCAGAGTCACGGCTGGAATCTCTACCTATGGATCTATTGGTATTGTGATTATTATACATCTCTTTCTTTTCTGTTTCCTAGAAGAATCCCCTCTTTTTTTAGCATAAAGTTACCTCAAATGCATAAAATCGAATATTTTCTATTTCTTTTCAAGTTGTATGGATCTTCCTTTAGGTTCCATTGTTTTTTATCTATGGGAGGAGAACTTATAGAGATCCTCAAGATAGCCTGTTATTTGAGCTGTCAGTTATGAATTACTTTCTCAGTTACTTGATGGTGGAGTTTTCGGTGGTTTTTTTTCTTCATTCTAGTGTCAAGCAGTTGTTTCTTGTCTTAATGAGTAGATGAAACTTTCTTGTGAGCCTTTTCACTCCGTGAGGGTATTATTAAGGAGTATACGTCACCTACTTTTCTTTTTTCTTCTTTTGAGTTCCCAACATGTGGAGCTTTGGATTTTATCTACTTTTAGTAAAATGGCCTAAACCTTTGTGCTTATGCATGTGGTATTCAGCAATTTTAGCTAGAACTCAGCTGTATTTTTCTTAATCATAAACCTAAAAAACCCAAGTTTTTAAAATTTAAGGGCATGTTTCACGGCATAGAAGTTTGATGCACTCATGTTGATCTAATCTGGATACTTGCTGTTGGATCAGTGTCTGTACTCTTTGAACGTGATCTTACATGTAATGGTATTTTGTAGTATAGGATATTAATTTTCTGCGTTGTTTGGCTGCCGATGTTCTAATGTTTTCCATTTGTAACTTCAAGGTGAAAATACTTTGCCATTTACACCACGACCAACTGAGGGCCGTTTTTCATGTCTCTCAACGAATCAGAAAGGCTGTAAGTCTTTTATCTGTCTGCTTCAAATGTACCACAAATTTTGGATGTTGACCATCTTTGTTTTTAACAGGTTTTGCTGGCAAGGCAATTCCACTTCAATTACACAACTCCAGATCGGTCCAGGCAGGAGATGTTGAGGATAACCACCCCTCGACCTACTGAACACTGGCCCTTCGTAAAGTTAGTATTGATTTAAACCTTTCGTTTGTTTGGCATCTTTATGTTAGAGCTAAGTTAAAAATAATATCTCACTATTACTTGTTTAGAAAAGGAGTAACAGTGTTCCAAACATGTTAGAACTTTGGACAAAAATTGGCCCCGGAGCATGTGTGGCTGTGTTTGTGTTCCAAACTTTCTTTCCAAGTCACTCTCGCTCATATTCAAGTTCCAATCTTTCTTGAACATTCTATTGGATTTTGATTACAGTGTTATTTCTGAAACTGGTATAAAGGATTAAGGATAATATTGCAACTTTTGAAAGAAAAATTGTAATATTGAAACTTTTGAAAAAATAATCGTATTCTTGAAAGCATCTTTTTTGCAATTTTTCCTTGTCTTATTGATCTGATCAAAACAATGATCTACAGCAAGGGAGATGGCAAAGGGTTTTCATTGCCAAGCCCTCACACTCCAAAAGCACCAAGACATGGTCCTCGTCCACCATCTCGTCTCAAAGTTTCAGAAATGAGGCAGGTTGCTGCAGTTCTCTTTCAAGAATCAGCTTTTCCCCCAAGATGCATGGTGCCATCTGTTATATCTAAACCTCTCTGCAAATCCTTGGCTTCAAACCGGGTTCTGTTTTACGAGGACGAGTTATGCCAAGCTGTTGCTCAAAACAAACTTCGTTGATTATAGTGGCTAGCAATGTCCCGCTGTGTTTTGTTTCTGTATATATGGGTTTTTTCCCTTTTTGTTGGTGCAGCAATTATATAGGAATTTCTACAAATTTTGTAGGCCTGCGTTGATGCAGATTTAGGTATCATGGAAAGGAACTTCTTGTTCTGTTGGAGTGAGAGGGTTGAAAAGTATTCAAGACTGTAGTTGTGGGAATAATCTATTCCGAACTTGTTACTTGTATAGTTCTATATATATATTCTAAACAGTGGTTTGTTCTGTTTTTCCCTGAATTTATTGTTTATAGCACTACTTTTTTGTTGCTTATTCAACCAATGGTTACCCATTACACCATTGTTTGGCCTGTAAAGATAAGTTGTGGAATC

mRNA sequence

GTTTCGTGAAATTCAAATAAAGATGAAACCCTAGCCCCTCTTTCACTTCTCGTCCCTATTTTCCCTCCCTTCCTCTCTCTCTCTCTCTCTCTAACTCGTTCTCGTTCTGCGCATTTCGAGGAATTTATCCTGAACTCTCTCGATTCCGAGGTTATGTTGATGGGTTGGGTTTAATTATTGATGTTGAGGGTTTATTGGAGGAGTAGAAAAAAGGCGTTTGTTTGTGGTTGCTGTAAATTGGGGAAATCGAGGAAGGGATGGGGAAGGTGTTTACGAATGATAGGGAGCCAAAGAAATTGAAGCGGAGAAGGAGGTCGAAGGGTTCTGGTGGGAAGTATTTGAAGCCGGGTGCTTTGGCGAAGCTCAGGTGTAGCAAGGGTTCGGTTGCTAAATCTTGTACTGATCTTGGGAGGAAGAGGGTGGCTGTGTTGGATGCTGGGAAGACGAAGAGGAATGTAGTGCTTGAGGATAAGGTTTCTGATAGAAGTCCTTTGATGTTGTCACCTGTGAAATTGGTGATGCATATAAACCATATTGGTACTCCAAAAACCCCTCGGGTTGAAGACTGTGAATCAGAGTCACGGCTGGAATCTCTACCTATGGATCTATTGGTGAAAATACTTTGCCATTTACACCACGACCAACTGAGGGCCGTTTTTCATGTCTCTCAACGAATCAGAAAGGCTGTTTTGCTGGCAAGGCAATTCCACTTCAATTACACAACTCCAGATCGGTCCAGGCAGGAGATGTTGAGGATAACCACCCCTCGACCTACTGAACACTGGCCCTTCGTAAACAAGGGAGATGGCAAAGGGTTTTCATTGCCAAGCCCTCACACTCCAAAAGCACCAAGACATGGTCCTCGTCCACCATCTCGTCTCAAAGTTTCAGAAATGAGGCAGGTTGCTGCAGTTCTCTTTCAAGAATCAGCTTTTCCCCCAAGATGCATGGTGCCATCTGTTATATCTAAACCTCTCTGCAAATCCTTGGCTTCAAACCGGGTTCTGTTTTACGAGGACGAGTTATGCCAAGCTGTTGCTCAAAACAAACTTCGTTGATTATAGTGGCTAGCAATGTCCCGCTGTGTTTTGTTTCTGTATATATGGGTTTTTTCCCTTTTTGTTGGTGCAGCAATTATATAGGAATTTCTACAAATTTTGTAGGCCTGCGTTGATGCAGATTTAGGTATCATGGAAAGGAACTTCTTGTTCTGTTGGAGTGAGAGGGTTGAAAAGTATTCAAGACTGTAGTTGTGGGAATAATCTATTCCGAACTTGTTACTTGTATAGTTCTATATATATATTCTAAACAGTGGTTTGTTCTGTTTTTCCCTGAATTTATTGTTTATAGCACTACTTTTTTGTTGCTTATTCAACCAATGGTTACCCATTACACCATTGTTTGGCCTGTAAAGATAAGTTGTGGAATC

Coding sequence (CDS)

ATGGGGAAGGTGTTTACGAATGATAGGGAGCCAAAGAAATTGAAGCGGAGAAGGAGGTCGAAGGGTTCTGGTGGGAAGTATTTGAAGCCGGGTGCTTTGGCGAAGCTCAGGTGTAGCAAGGGTTCGGTTGCTAAATCTTGTACTGATCTTGGGAGGAAGAGGGTGGCTGTGTTGGATGCTGGGAAGACGAAGAGGAATGTAGTGCTTGAGGATAAGGTTTCTGATAGAAGTCCTTTGATGTTGTCACCTGTGAAATTGGTGATGCATATAAACCATATTGGTACTCCAAAAACCCCTCGGGTTGAAGACTGTGAATCAGAGTCACGGCTGGAATCTCTACCTATGGATCTATTGGTGAAAATACTTTGCCATTTACACCACGACCAACTGAGGGCCGTTTTTCATGTCTCTCAACGAATCAGAAAGGCTGTTTTGCTGGCAAGGCAATTCCACTTCAATTACACAACTCCAGATCGGTCCAGGCAGGAGATGTTGAGGATAACCACCCCTCGACCTACTGAACACTGGCCCTTCGTAAACAAGGGAGATGGCAAAGGGTTTTCATTGCCAAGCCCTCACACTCCAAAAGCACCAAGACATGGTCCTCGTCCACCATCTCGTCTCAAAGTTTCAGAAATGAGGCAGGTTGCTGCAGTTCTCTTTCAAGAATCAGCTTTTCCCCCAAGATGCATGGTGCCATCTGTTATATCTAAACCTCTCTGCAAATCCTTGGCTTCAAACCGGGTTCTGTTTTACGAGGACGAGTTATGCCAAGCTGTTGCTCAAAACAAACTTCGTTGA

Protein sequence

MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVNKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPLCKSLASNRVLFYEDELCQAVAQNKLR*

Homology

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BLAST of CsGy3G000560.1 vs. ExPASy Swiss-Prot
Match: Q5XF11 (F-box protein At4g35930 OS=Arabidopsis thaliana OX=3702 GN=At4g35930 PE=2 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.2e-77
Identity = 168/321 (52.34%), Postives = 203/321 (63.24%), Query Frame = 0


Query: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKV   D + K   R+++ K S  KYLKPGAL +L  SK S AKSC +LG+KRV V D 
Sbjct: 1   MGKVSPKDLDSKTSVRKKKLKSSSNKYLKPGALVQLCYSKASAAKSCNELGKKRVPVFDT 60

Query: 61  ------GK-----------------------------------TKRNVVLEDKVSD---- 120
                 GK                                    KR+ ++     D    
Sbjct: 61  KSCNDLGKKRVPVFDIKHARNNKMAVEQLNSPKSPLMLSPVNVVKRSTLVRPMKFDDLQV 120

Query: 121 -------RSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVKILCHLHHD 180
                  +SPLMLSP+ +VM    + TPKTP+ + C SES+LESLPMDLLVKI+CHLHHD
Sbjct: 121 ESNNTCKKSPLMLSPMGIVMQNTLLRTPKTPQADPCVSESQLESLPMDLLVKIVCHLHHD 180

Query: 181 QLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVNKGDGKGFS 240
           QL+AVFHVSQRIR A +LARQ+HFNYTTPDRSRQEMLR+ TP P   WPF  +GDG    
Sbjct: 181 QLKAVFHVSQRIRMATILARQYHFNYTTPDRSRQEMLRVMTPVPINRWPF-RRGDGNPTM 240

Query: 241 LPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQ-ESAFPPRCMVPSVISKP-LCKSLAS 266
           + SPHTPKAP+H PRPPSR K++EM+Q+ AVLFQ ++ FP RC+VPSV+ +P L K +A 
Sbjct: 241 VSSPHTPKAPKHAPRPPSRTKLAEMKQITAVLFQDQTPFPSRCIVPSVLQRPTLFKPMAP 300

[Close]

BLAST of CsGy3G000560.1 vs. ExPASy Swiss-Prot
Match: Q8GX77 (F-box protein At1g61340 OS=Arabidopsis thaliana OX=3702 GN=At1g61340 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-09
Identity = 29/64 (45.31%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 97  KTPRVEDCESESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTT 156
           KT  V + +S   LE LP+D+LV+I+C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+T
Sbjct: 69  KTTSVAEGQSR-ELEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYST 128

Query: 157 PDRS 161
           P ++
Sbjct: 129 PRKT 131

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BLAST of CsGy3G000560.1 vs. ExPASy Swiss-Prot
Match: O65416 (F-box protein SKIP27 OS=Arabidopsis thaliana OX=3702 GN=SKIP27 PE=1 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 1.2e-08
Identity = 43/133 (32.33%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 31  GALAKLRCSKGSVAKSCTDLGRKRVAVLDAGK--TKRNVVLEDKVSDRSPLMLSPVKLVM 90
           G   +L    GSV +    LGRKR+ +    +    R+ V    VS+  P+  S  +   
Sbjct: 51  GEEEELELGLGSV-RFTRGLGRKRILISSCVRESLSRSAVEIPVVSESPPVKSSLKRQRS 110

Query: 91  HINHIGTPKTPRVEDCESESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLAR 150
            I  + +  +        +SRLE LP DLL++++C + H+ L+++  VS+ IR+A L+A+
Sbjct: 111 RITIVSSSSS-------EKSRLECLPQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAK 170

Query: 151 QFHFNYTTPDRSR 162
             HF YTTP ++R
Sbjct: 171 TLHFAYTTPKKTR 175

[Close]

BLAST of CsGy3G000560.1 vs. ExPASy Swiss-Prot
Match: Q9S9T6 (F-box protein At4g05010 OS=Arabidopsis thaliana OX=3702 GN=At4g05010 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-07
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 97  KTPRVEDCES-ESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYT 156
           K P  E  ES  S LE+L  D+L+++LCH+ H+ L  +  VS+ IRKAV+ A++ HF+Y+
Sbjct: 50  KRPSHETTESCRSLLETLHQDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKKSHFDYS 109

Query: 157 TPDR 160
           TP +
Sbjct: 110 TPKK 113

[Close]

BLAST of CsGy3G000560.1 vs. NCBI nr
Match: XP_004146154.1 (F-box protein At4g35930 [Cucumis sativus] >XP_031738005.1 F-box protein At4g35930 [Cucumis sativus] >KGN55645.1 hypothetical protein Csa_011427 [Cucumis sativus])

HSP 1 Score: 533 bits (1372), Expect = 7.71e-191
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120
           GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

[Close]

BLAST of CsGy3G000560.1 vs. NCBI nr
Match: XP_008448525.1 (PREDICTED: F-box protein At4g35930 [Cucumis melo] >KAA0052947.1 F-box protein [Cucumis melo var. makuwa] >TYK11403.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 526 bits (1356), Expect = 2.12e-188
Identity = 263/266 (98.87%), Postives = 264/266 (99.25%), Query Frame = 0


Query: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALA+LRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120
           GK KRN VLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKAKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

[Close]

BLAST of CsGy3G000560.1 vs. NCBI nr
Match: XP_038903596.1 (F-box protein At4g35930 [Benincasa hispida])

HSP 1 Score: 515 bits (1326), Expect = 7.94e-184
Identity = 256/266 (96.24%), Postives = 262/266 (98.50%), Query Frame = 0


Query: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKVFT+DREPKKLKRRRRSKGSGGKYLKPGALA+LRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTSDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120
           GKTKRNVVLEDKVSDRSPLMLSPVKLVMHI+HI TP+TPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHISHISTPRTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFVN
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVN 180

Query: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KG+GKG  LPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSV+SKPL
Sbjct: 181 KGEGKGLLLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVLSKPL 240

Query: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

[Close]

BLAST of CsGy3G000560.1 vs. NCBI nr
Match: XP_022145262.1 (F-box protein At4g35930 [Momordica charantia] >XP_022145263.1 F-box protein At4g35930 [Momordica charantia])

HSP 1 Score: 499 bits (1285), Expect = 1.41e-177
Identity = 247/265 (93.21%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKVF+NDR+ KKLKRRRRSKGSGGKYLKPGALA+LRCSKGSVAKSCTDLGRKRVAVLD 
Sbjct: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60

Query: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120
           GKTKRN V EDKVSD+SP+MLSPVKLVMHINHIGTP+TPRVE CESESRLESLPMDLLVK
Sbjct: 61  GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRP+EHWPFV+
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS 180

Query: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKG  +PSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEDELCQAVAQNKL 265
           CKSLASNRVLFYE+ELCQAVAQNKL
Sbjct: 241 CKSLASNRVLFYEEELCQAVAQNKL 265

[Close]

BLAST of CsGy3G000560.1 vs. NCBI nr
Match: XP_022943859.1 (F-box protein At4g35930 [Cucurbita moschata] >KAG6596254.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027800.1 F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 485 bits (1248), Expect = 8.24e-172
Identity = 242/267 (90.64%), Postives = 253/267 (94.76%), Query Frame = 0


Query: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MG+ F+N+RE KKLKRRRR+KGS GKYLKPGAL+KLRCSKGSV KSCT LGRKRVAVLDA
Sbjct: 8   MGEAFSNERESKKLKRRRRAKGSSGKYLKPGALSKLRCSKGSVGKSCTYLGRKRVAVLDA 67

Query: 61  GKTKRNVV-LEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLV 120
           GKTKRN   LEDKVSDRSPLMLSPVKLVMHINHI TP+TPRVE CESESRLESLPMDLLV
Sbjct: 68  GKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLESLPMDLLV 127

Query: 121 KILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFV 180
           K+LCHLHHDQLRAVFHVSQRIRKAVL+ARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFV
Sbjct: 128 KVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFV 187

Query: 181 NKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKP 240
           +KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQE+ FP RCMVPSVI KP
Sbjct: 188 SKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQETGFPSRCMVPSVIPKP 247

Query: 241 LCKSLASNRVLFYEDELCQAVAQNKLR 266
           LCKSLASNRVLFYE+ELCQAVAQNKLR
Sbjct: 248 LCKSLASNRVLFYEEELCQAVAQNKLR 274

[Close]

BLAST of CsGy3G000560.1 vs. ExPASy TrEMBL
Match: A0A0A0L111 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002650 PE=4 SV=1)

HSP 1 Score: 533 bits (1372), Expect = 3.73e-191
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120
           GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

[Close]

BLAST of CsGy3G000560.1 vs. ExPASy TrEMBL
Match: A0A5A7UEK6 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00560 PE=4 SV=1)

HSP 1 Score: 526 bits (1356), Expect = 1.03e-188
Identity = 263/266 (98.87%), Postives = 264/266 (99.25%), Query Frame = 0


Query: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALA+LRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120
           GK KRN VLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKAKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

[Close]

BLAST of CsGy3G000560.1 vs. ExPASy TrEMBL
Match: A0A1S3BKS0 (F-box protein At4g35930 OS=Cucumis melo OX=3656 GN=LOC103490677 PE=4 SV=1)

HSP 1 Score: 526 bits (1356), Expect = 1.03e-188
Identity = 263/266 (98.87%), Postives = 264/266 (99.25%), Query Frame = 0


Query: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALA+LRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120
           GK KRN VLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKAKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

[Close]

BLAST of CsGy3G000560.1 vs. ExPASy TrEMBL
Match: A0A6J1CW37 (F-box protein At4g35930 OS=Momordica charantia OX=3673 GN=LOC111014758 PE=4 SV=1)

HSP 1 Score: 499 bits (1285), Expect = 6.84e-178
Identity = 247/265 (93.21%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKVF+NDR+ KKLKRRRRSKGSGGKYLKPGALA+LRCSKGSVAKSCTDLGRKRVAVLD 
Sbjct: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60

Query: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120
           GKTKRN V EDKVSD+SP+MLSPVKLVMHINHIGTP+TPRVE CESESRLESLPMDLLVK
Sbjct: 61  GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRP+EHWPFV+
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS 180

Query: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKG  +PSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEDELCQAVAQNKL 265
           CKSLASNRVLFYE+ELCQAVAQNKL
Sbjct: 241 CKSLASNRVLFYEEELCQAVAQNKL 265

[Close]

BLAST of CsGy3G000560.1 vs. ExPASy TrEMBL
Match: A0A6J1FVG9 (F-box protein At4g35930 OS=Cucurbita moschata OX=3662 GN=LOC111448461 PE=4 SV=1)

HSP 1 Score: 485 bits (1248), Expect = 3.99e-172
Identity = 242/267 (90.64%), Postives = 253/267 (94.76%), Query Frame = 0


Query: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MG+ F+N+RE KKLKRRRR+KGS GKYLKPGAL+KLRCSKGSV KSCT LGRKRVAVLDA
Sbjct: 8   MGEAFSNERESKKLKRRRRAKGSSGKYLKPGALSKLRCSKGSVGKSCTYLGRKRVAVLDA 67

Query: 61  GKTKRNVV-LEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLV 120
           GKTKRN   LEDKVSDRSPLMLSPVKLVMHINHI TP+TPRVE CESESRLESLPMDLLV
Sbjct: 68  GKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLESLPMDLLV 127

Query: 121 KILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFV 180
           K+LCHLHHDQLRAVFHVSQRIRKAVL+ARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFV
Sbjct: 128 KVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFV 187

Query: 181 NKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKP 240
           +KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQE+ FP RCMVPSVI KP
Sbjct: 188 SKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQETGFPSRCMVPSVIPKP 247

Query: 241 LCKSLASNRVLFYEDELCQAVAQNKLR 266
           LCKSLASNRVLFYE+ELCQAVAQNKLR
Sbjct: 248 LCKSLASNRVLFYEEELCQAVAQNKLR 274

[Close]

BLAST of CsGy3G000560.1 vs. TAIR 10
Match: AT4G35930.1 (F-box family protein )

HSP 1 Score: 291.2 bits (744), Expect = 8.5e-79
Identity = 168/321 (52.34%), Postives = 203/321 (63.24%), Query Frame = 0


Query: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKV   D + K   R+++ K S  KYLKPGAL +L  SK S AKSC +LG+KRV V D 
Sbjct: 1   MGKVSPKDLDSKTSVRKKKLKSSSNKYLKPGALVQLCYSKASAAKSCNELGKKRVPVFDT 60

Query: 61  ------GK-----------------------------------TKRNVVLEDKVSD---- 120
                 GK                                    KR+ ++     D    
Sbjct: 61  KSCNDLGKKRVPVFDIKHARNNKMAVEQLNSPKSPLMLSPVNVVKRSTLVRPMKFDDLQV 120

Query: 121 -------RSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVKILCHLHHD 180
                  +SPLMLSP+ +VM    + TPKTP+ + C SES+LESLPMDLLVKI+CHLHHD
Sbjct: 121 ESNNTCKKSPLMLSPMGIVMQNTLLRTPKTPQADPCVSESQLESLPMDLLVKIVCHLHHD 180

Query: 181 QLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVNKGDGKGFS 240
           QL+AVFHVSQRIR A +LARQ+HFNYTTPDRSRQEMLR+ TP P   WPF  +GDG    
Sbjct: 181 QLKAVFHVSQRIRMATILARQYHFNYTTPDRSRQEMLRVMTPVPINRWPF-RRGDGNPTM 240

Query: 241 LPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQ-ESAFPPRCMVPSVISKP-LCKSLAS 266
           + SPHTPKAP+H PRPPSR K++EM+Q+ AVLFQ ++ FP RC+VPSV+ +P L K +A 
Sbjct: 241 VSSPHTPKAPKHAPRPPSRTKLAEMKQITAVLFQDQTPFPSRCIVPSVLQRPTLFKPMAP 300

[Close]

BLAST of CsGy3G000560.1 vs. TAIR 10
Match: AT1G61340.1 (F-box family protein )

HSP 1 Score: 63.9 bits (154), Expect = 2.2e-10
Identity = 29/64 (45.31%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 97  KTPRVEDCESESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTT 156
           KT  V + +S   LE LP+D+LV+I+C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+T
Sbjct: 69  KTTSVAEGQSR-ELEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYST 128

Query: 157 PDRS 161
           P ++
Sbjct: 129 PRKT 131

[Close]

BLAST of CsGy3G000560.1 vs. TAIR 10
Match: AT4G21510.1 (F-box family protein )

HSP 1 Score: 62.0 bits (149), Expect = 8.4e-10
Identity = 43/133 (32.33%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 31  GALAKLRCSKGSVAKSCTDLGRKRVAVLDAGK--TKRNVVLEDKVSDRSPLMLSPVKLVM 90
           G   +L    GSV +    LGRKR+ +    +    R+ V    VS+  P+  S  +   
Sbjct: 51  GEEEELELGLGSV-RFTRGLGRKRILISSCVRESLSRSAVEIPVVSESPPVKSSLKRQRS 110

Query: 91  HINHIGTPKTPRVEDCESESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLAR 150
            I  + +  +        +SRLE LP DLL++++C + H+ L+++  VS+ IR+A L+A+
Sbjct: 111 RITIVSSSSS-------EKSRLECLPQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAK 170

Query: 151 QFHFNYTTPDRSR 162
             HF YTTP ++R
Sbjct: 171 TLHFAYTTPKKTR 175

[Close]

BLAST of CsGy3G000560.1 vs. TAIR 10
Match: AT4G05010.1 (F-box family protein )

HSP 1 Score: 58.9 bits (141), Expect = 7.1e-09
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 97  KTPRVEDCES-ESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYT 156
           K P  E  ES  S LE+L  D+L+++LCH+ H+ L  +  VS+ IRKAV+ A++ HF+Y+
Sbjct: 50  KRPSHETTESCRSLLETLHQDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKKSHFDYS 109

Query: 157 TPDR 160
           TP +
Sbjct: 110 TPKK 113

[Close]

BLAST of CsGy3G000560.1 vs. TAIR 10
Match: AT1G61340.2 (F-box family protein )

HSP 1 Score: 50.1 bits (118), Expect = 3.3e-06
Identity = 19/44 (43.18%), Postives = 35/44 (79.55%), Query Frame = 0


Query: 117 LLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRS 161
           ++V+I+C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+TP ++
Sbjct: 134 VIVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRKT 177

The following BLAST results are available for this feature:

BLAST of CsGy3G000560.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XF11	1.2e-77	52.34	F-box protein At4g35930 OS=Arabidopsis thaliana OX=3702 GN=At4g35930 PE=2 SV=1	[more]
Q8GX77	3.1e-09	45.31	F-box protein At1g61340 OS=Arabidopsis thaliana OX=3702 GN=At1g61340 PE=2 SV=1	[more]
O65416	1.2e-08	32.33	F-box protein SKIP27 OS=Arabidopsis thaliana OX=3702 GN=SKIP27 PE=1 SV=2	[more]
Q9S9T6	1.0e-07	45.31	F-box protein At4g05010 OS=Arabidopsis thaliana OX=3702 GN=At4g05010 PE=2 SV=1	[more]

BLAST of CsGy3G000560.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146154.1	7.71e-191	100.00	F-box protein At4g35930 [Cucumis sativus] >XP_031738005.1 F-box protein At4g3593...	[more]
XP_008448525.1	2.12e-188	98.87	PREDICTED: F-box protein At4g35930 [Cucumis melo] >KAA0052947.1 F-box protein [C...	[more]
XP_038903596.1	7.94e-184	96.24	F-box protein At4g35930 [Benincasa hispida]	[more]
XP_022145262.1	1.41e-177	93.21	F-box protein At4g35930 [Momordica charantia] >XP_022145263.1 F-box protein At4g...	[more]
XP_022943859.1	8.24e-172	90.64	F-box protein At4g35930 [Cucurbita moschata] >KAG6596254.1 F-box protein, partia...	[more]

BLAST of CsGy3G000560.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L111	3.73e-191	100.00	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002650 PE=4 ...	[more]
A0A5A7UEK6	1.03e-188	98.87	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00560 ...	[more]
A0A1S3BKS0	1.03e-188	98.87	F-box protein At4g35930 OS=Cucumis melo OX=3656 GN=LOC103490677 PE=4 SV=1	[more]
A0A6J1CW37	6.84e-178	93.21	F-box protein At4g35930 OS=Momordica charantia OX=3673 GN=LOC111014758 PE=4 SV=1	[more]
A0A6J1FVG9	3.99e-172	90.64	F-box protein At4g35930 OS=Cucurbita moschata OX=3662 GN=LOC111448461 PE=4 SV=1	[more]

BLAST of CsGy3G000560.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35930.1	8.5e-79	52.34	F-box family protein	[more]
AT1G61340.1	2.2e-10	45.31	F-box family protein	[more]
AT4G21510.1	8.4e-10	32.33	F-box family protein	[more]
AT4G05010.1	7.1e-09	45.31	F-box family protein	[more]
AT1G61340.2	3.3e-06	43.18	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..209
None	No IPR available	PANTHER	PTHR34049:SF2	F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 1..266
None	No IPR available	PANTHER	PTHR34049	F-BOX PROTEIN SKIP27	coord: 1..266
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 107..155 score: 9.02057
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 99..176

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy3G000560	CsGy3G000560	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G000560.1.utr5p1	CsGy3G000560.1.utr5p1	five_prime_UTR
CsGy3G000560.1.utr5p2	CsGy3G000560.1.utr5p2	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G000560.1.exon1	CsGy3G000560.1.exon1	exon
CsGy3G000560.1.exon2	CsGy3G000560.1.exon2	exon
CsGy3G000560.1.exon3	CsGy3G000560.1.exon3	exon
CsGy3G000560.1.exon4	CsGy3G000560.1.exon4	exon
CsGy3G000560.1.exon5	CsGy3G000560.1.exon5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy3G000560.1	cds.CsGy3G000560.1	CDS
cds.CsGy3G000560.1	cds.CsGy3G000560.1_2	CDS
cds.CsGy3G000560.1	cds.CsGy3G000560.1_3	CDS
cds.CsGy3G000560.1	cds.CsGy3G000560.1_4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy3G000560.1.utr3p1	CsGy3G000560.1.utr3p1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy3G000560.1	CsGy3G000560.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding