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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAAACCGATTGGGTTTGCGGTTTGTTTGTGGGAATCGAACTTATTTCCGGTGGATTATGGAGTTGTGGTTGCAAATTTATAGGAACTATTGATGAAGGTTTGAAGGATTTGAAAGAAATTAAGAAAGAAAGAGCTGAGTATAATCCATCCAAGAACAGCTTCAGCAAAATTGTAGTCAACGGTGAGTACGAATATTCCCCAAATTTTCCCTCAAAATGTATAAATGATTAG mRNA sequence ATGGAAACCGATTGGGTTTGCGGTTTGTTTGTGGGAATCGAACTTATTTCCGGTGGATTATGGAGTTGTGGTTGCAAATTTATAGGAACTATTGATGAAGGTTTGAAGGATTTGAAAGAAATTAAGAAAGAAAGAGCTGAGTATAATCCATCCAAGAACAGCTTCAGCAAAATTGTAGTCAACGGTGAGTACGAATATTCCCCAAATTTTCCCTCAAAATGTATAAATGATTAG Coding sequence (CDS) ATGGAAACCGATTGGGTTTGCGGTTTGTTTGTGGGAATCGAACTTATTTCCGGTGGATTATGGAGTTGTGGTTGCAAATTTATAGGAACTATTGATGAAGGTTTGAAGGATTTGAAAGAAATTAAGAAAGAAAGAGCTGAGTATAATCCATCCAAGAACAGCTTCAGCAAAATTGTAGTCAACGGTGAGTACGAATATTCCCCAAATTTTCCCTCAAAATGTATAAATGATTAG Protein sequence METDWVCGLFVGIELISGGLWSCGCKFIGTIDEGLKDLKEIKKERAEYNPSKNSFSKIVVNGEYEYSPNFPSKCIND*
Homology
BLAST of CsGy2G006900.1 vs. NCBI nr
Match: KGN61211.1 (hypothetical protein Csa_006185 [Cucumis sativus]) HSP 1 Score: 168 bits (426), Expect = 9.27e-53 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
Query: 1 METDWVCGLFVGIELISGGLWSCGCKFIGTIDEGLKDLKEIKKERAEYNPSKNSFSKIVV 60
METDWVCGLFVGIELISGGLWSCGCKFIGTIDEGLKDLKEIKKERAEYNPSKNSFSKIVV
Sbjct: 1 METDWVCGLFVGIELISGGLWSCGCKFIGTIDEGLKDLKEIKKERAEYNPSKNSFSKIVV 60
Query: 61 NGEYEYSPNFPSKCIND 77
NGEYEYSPNFPSKCIND
Sbjct: 61 NGEYEYSPNFPSKCIND 77
BLAST of CsGy2G006900.1 vs. ExPASy TrEMBL
Match: A0A0A0LMK2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070280 PE=4 SV=1) HSP 1 Score: 168 bits (426), Expect = 4.49e-53 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
Query: 1 METDWVCGLFVGIELISGGLWSCGCKFIGTIDEGLKDLKEIKKERAEYNPSKNSFSKIVV 60
METDWVCGLFVGIELISGGLWSCGCKFIGTIDEGLKDLKEIKKERAEYNPSKNSFSKIVV
Sbjct: 1 METDWVCGLFVGIELISGGLWSCGCKFIGTIDEGLKDLKEIKKERAEYNPSKNSFSKIVV 60
Query: 61 NGEYEYSPNFPSKCIND 77
NGEYEYSPNFPSKCIND
Sbjct: 61 NGEYEYSPNFPSKCIND 77
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KGN61211.1 | 9.27e-53 | 100.00 | hypothetical protein Csa_006185 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LMK2 | 4.49e-53 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070280 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsGy2G006900.1.exon1 | CsGy2G006900.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| cds.CsGy2G006900.1 | cds.CsGy2G006900.1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsGy2G006900.1 | CsGy2G006900.1-protein | polypeptide |
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