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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAGCTTCCCTGTGCTCCGTTCGAAATCGTCGCCCAATCCTTCACGCCTCTCCTTCGAAAATGAAATGAGCTTCTTTGTGCTCCGTTCGAAATCACCCTTTATATTCAGATTGTAAATCTGAGCCTTTGTGTGTTCTCTCTGGTCTTGAGATTTCTCGACTCTCTGATATTTTCAAAACCCTACATCTAGAGTACGACGAGACAACTTGGTTGAAGGAGAGGGGAATGGTGGAGAGACAACGAGGCGGATGGCAGAGGCTGAGAGTGACAAAGAAGCTGGCTGAAGGAGAGGAGGCAAAGGACAGAGAGGTGAACAACGAATATAGTTTGTTGAATAAGACGACTGCTCAAATGACAAAGAGTGTTCAAGAAGAGGCGTGA mRNA sequence ATGAGCTTCCCTGTGCTCCGTTCGAAATCGTCGCCCAATCCTTCACGCCTCTCCTTCGAAAATGAAATGAGCTTCTTTATTTCTCGACTCTCTGATATTTTCAAAACCCTACATCTAGAGTACGACGAGACAACTTGGTTGAAGGAGAGGGGAATGGTGGAGAGACAACGAGGCGGATGGCAGAGGCTGAGAGTGACAAAGAAGCTGGCTGAAGGAGAGGAGGCAAAGGACAGAGAGGTGAACAACGAATATAGTTTGTTGAATAAGACGACTGCTCAAATGACAAAGAGTGTTCAAGAAGAGGCGTGA Coding sequence (CDS) ATGAGCTTCCCTGTGCTCCGTTCGAAATCGTCGCCCAATCCTTCACGCCTCTCCTTCGAAAATGAAATGAGCTTCTTTATTTCTCGACTCTCTGATATTTTCAAAACCCTACATCTAGAGTACGACGAGACAACTTGGTTGAAGGAGAGGGGAATGGTGGAGAGACAACGAGGCGGATGGCAGAGGCTGAGAGTGACAAAGAAGCTGGCTGAAGGAGAGGAGGCAAAGGACAGAGAGGTGAACAACGAATATAGTTTGTTGAATAAGACGACTGCTCAAATGACAAAGAGTGTTCAAGAAGAGGCGTGA Protein sequence MSFPVLRSKSSPNPSRLSFENEMSFFISRLSDIFKTLHLEYDETTWLKERGMVERQRGGWQRLRVTKKLAEGEEAKDREVNNEYSLLNKTTAQMTKSVQEEA*
Homology
BLAST of CsGy2G005780.2 vs. NCBI nr
Match: KGN61094.1 (hypothetical protein Csa_021283 [Cucumis sativus]) HSP 1 Score: 191 bits (485), Expect = 5.60e-61 Identity = 99/102 (97.06%), Postives = 100/102 (98.04%), Query Frame = 0
Query: 1 MSFPVLRSKSSPNPSRLSFENEMSFFISRLSDIFKTLHLEYDETTWLKERGMVERQRGGW 60
MSFPVLRSKSSPNPSRLSF+NEMSF ISRLSDIFKTL LEYDETTWLKERGMVERQRGGW
Sbjct: 1 MSFPVLRSKSSPNPSRLSFKNEMSFCISRLSDIFKTLDLEYDETTWLKERGMVERQRGGW 60
Query: 61 QRLRVTKKLAEGEEAKDREVNNEYSLLNKTTAQMTKSVQEEA 102
QRLRVTKKLAEGEEAKDREVNNEYSLLNKTTAQMTKSVQEEA
Sbjct: 61 QRLRVTKKLAEGEEAKDREVNNEYSLLNKTTAQMTKSVQEEA 102
BLAST of CsGy2G005780.2 vs. ExPASy TrEMBL
Match: A0A0A0LJ64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G049340 PE=4 SV=1) HSP 1 Score: 191 bits (485), Expect = 2.71e-61 Identity = 99/102 (97.06%), Postives = 100/102 (98.04%), Query Frame = 0
Query: 1 MSFPVLRSKSSPNPSRLSFENEMSFFISRLSDIFKTLHLEYDETTWLKERGMVERQRGGW 60
MSFPVLRSKSSPNPSRLSF+NEMSF ISRLSDIFKTL LEYDETTWLKERGMVERQRGGW
Sbjct: 1 MSFPVLRSKSSPNPSRLSFKNEMSFCISRLSDIFKTLDLEYDETTWLKERGMVERQRGGW 60
Query: 61 QRLRVTKKLAEGEEAKDREVNNEYSLLNKTTAQMTKSVQEEA 102
QRLRVTKKLAEGEEAKDREVNNEYSLLNKTTAQMTKSVQEEA
Sbjct: 61 QRLRVTKKLAEGEEAKDREVNNEYSLLNKTTAQMTKSVQEEA 102
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KGN61094.1 | 5.60e-61 | 97.06 | hypothetical protein Csa_021283 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LJ64 | 2.71e-61 | 97.06 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G049340 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsGy2G005780.2.exon1 | CsGy2G005780.2.exon1 | exon |
| CsGy2G005780.2.exon2 | CsGy2G005780.2.exon2 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| cds.CsGy2G005780.2 | cds.CsGy2G005780.2 | CDS |
| cds.CsGy2G005780.2 | cds.CsGy2G005780.2_2 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsGy2G005780.2 | CsGy2G005780.2-protein | polypeptide |
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