CsGy1G015090.1 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G015090.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Pentatricopeptide repeat-containing protein
Location	Gy14Chr1: 11013869 .. 11015983 (+)
Sequence length	2115
RNA-Seq Expression	CsGy1G015090.1
Synteny	CsGy1G015090.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTCCAGCTCTGCTATTCGCCGCCCACCTTCTTTACCGAACACCATTTCCTTTCCAATTCTCTCACTCCTCAACGTAAAACAACTCTGTCCAACTCCTCTCCTCTTTTCAAGCTCAGTCCCATTCCTCGTCACTCAAAACCGTTCCTCCAAATTACCAATGTCTCGCTACAGGAACACGCTCCTCAAGATACCCAAAATACAATTCCCTCTGCTGATGAAATCTCCAAATACCCAGATTCGAAATCCGGTTCCTCCTCGAACAGCTCCGTTTGGGTCAATCCTAGAAGCCCCAGAGCTTCCAAACTTCGGAAGCAGTCGTACGAAGCAAGATATGCTTCTCTTATTAGAGTATCGGAGTCTTTAGACTCTTCTAATCCATGTGAGGTAGATGTTGCTGATGTCTTGAAGGTGATAGGTAATAACATTTTAGAACGGGACGCTATTTTAGTGCTGAATAACATGTCAAATTCCCAAACTGCGTTGCTTGCTCTTCGCTACTTCCAGGATATGCTGAAATCAAGTAAACAGACAATTTTTTATAACGTGACACTGAAGGTGTTTAGGAAGTGCAGAGATATGGAGGGTGCAGAGAAACTGTTCGAAGAAATGATTAACAGAGGAGTTAAGCCTGATAATGTGACATTTTCTACAATTATTAGTTGTGCTAGGTTGTGTTCTTTACCAAGTAAGGCTGTTGAGTGGTTTGAGAAGATGCCAAGTTTTGACTGTAATCCTGATGATGTTACTTACTCTACGATGATTGATGCCTATGGACGTGCTGGTAATGTTGACATGGCTTTCAGTTTGTATGACCGTGCAAGAACGGAAAACTGGCGAATTGATCCTGCGACATTCTCGACAATGATCAAAATTCATGGAGTGGCTGGGAACTATGATGGGTGCTTGAATGTTTATGAAGAAATGAAGGCTATAGGCATCAAGCCAAACTTGGTTATATATAACTGCTTGTTGGATGCTATGGGTAGGGCTAAAAGACCTTGGCAGATCAAAACCATTTACAAAGAGATGATTAAAAATGGATTTTCACCAAGTTGGGCAACTTATGCTTCTCTTTTACGTGCCTATGGAAGAGCCAGGTATGGTGAGGATGCTCTCATTGTTTACAAGGAGATGAAGGAAAAGGGACTGCAGTTAAACGTAATTCTCTACAATACGCTTTTAGCTATGTGTGCTGATGTTGGCTATGTTAATGAGGCTGTTGAAATTTTTCAAGATATGAAGAGTTCTGGCACTTGCTCACCTGACAGTTGGACATTTTCTTCCATGATCACCATATATTCCTGCGGTGGAAAAGTATCAGAGGCTGAAGAAATGTTGAACGATATGGTGGAAGCTGGTTTTGACCCTAATATCTTTGTCTTAACATCACTAATCCAGTGCTATGGGAAAGCTAAACGTGTTGATGATGTAGTGAGGACATTCAATCAATTGATAGAGTTAGGATTAACTCCAGACGATCGATTCTGTGGCTGCCTTCTCAATGTGATTACCCAGACACCAAAAGGGGAACTTGGTAAGCTGATTGATTGTGTTGTGAGAGCTAATCCAAAACTCGGGTTTGTGGTTGAACTCTTGCTAGGGGAGCAAGACAAGGAAGGAAATTTCAGAACTGAAGCCTCAGAACTCTTTAGTGTTGTCAGTGCTGATGTGAGAAAAGCTTACTGCAATTGCTTAATTGATCTCTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAACTACTGGATTTGGGGCTTACACTTCAGATATATAAAGATTTGCAGTCCAGGTCTCCAACTCAGTGGTCTCTTTATCTTAAGGGTCTTTCTCTTGGGGCTGCTCTCACTGCATTACACGTTTGGATAAAGGACTTAACAAAGGTACTTGAATCTGGGGAGGAACTTCCACCATTACTTGGAATAAATACTGGACATGGAAAACACAAGTATTCAGATAAGGGTTTGGCAAGCGTCTTTGAATCACATTTAAAGGAATTAAATGCTCCATTCCATGAGGCTCCAGAAAAGGTCGGATGGTTTTTGACAACTAAAGTGGCAGCAAAATCATGGTTGGAGTCTAGAAGTTCCCCTGAATTGGTTGCAGCATAG

mRNA sequence

ATGGCGTTCCAGCTCTGCTATTCGCCGCCCACCTTCTTTACCGAACACCATTTCCTTTCCAATTCTCTCACTCCTCAACGTAAAACAACTCTGTCCAACTCCTCTCCTCTTTTCAAGCTCAGTCCCATTCCTCGTCACTCAAAACCGTTCCTCCAAATTACCAATGTCTCGCTACAGGAACACGCTCCTCAAGATACCCAAAATACAATTCCCTCTGCTGATGAAATCTCCAAATACCCAGATTCGAAATCCGGTTCCTCCTCGAACAGCTCCGTTTGGGTCAATCCTAGAAGCCCCAGAGCTTCCAAACTTCGGAAGCAGTCGTACGAAGCAAGATATGCTTCTCTTATTAGAGTATCGGAGTCTTTAGACTCTTCTAATCCATGTGAGGTAGATGTTGCTGATGTCTTGAAGGTGATAGGTAATAACATTTTAGAACGGGACGCTATTTTAGTGCTGAATAACATGTCAAATTCCCAAACTGCGTTGCTTGCTCTTCGCTACTTCCAGGATATGCTGAAATCAAGTAAACAGACAATTTTTTATAACGTGACACTGAAGGTGTTTAGGAAGTGCAGAGATATGGAGGGTGCAGAGAAACTGTTCGAAGAAATGATTAACAGAGGAGTTAAGCCTGATAATGTGACATTTTCTACAATTATTAGTTGTGCTAGGTTGTGTTCTTTACCAAGTAAGGCTGTTGAGTGGTTTGAGAAGATGCCAAGTTTTGACTGTAATCCTGATGATGTTACTTACTCTACGATGATTGATGCCTATGGACGTGCTGGTAATGTTGACATGGCTTTCAGTTTGTATGACCGTGCAAGAACGGAAAACTGGCGAATTGATCCTGCGACATTCTCGACAATGATCAAAATTCATGGAGTGGCTGGGAACTATGATGGGTGCTTGAATGTTTATGAAGAAATGAAGGCTATAGGCATCAAGCCAAACTTGGTTATATATAACTGCTTGTTGGATGCTATGGGTAGGGCTAAAAGACCTTGGCAGATCAAAACCATTTACAAAGAGATGATTAAAAATGGATTTTCACCAAGTTGGGCAACTTATGCTTCTCTTTTACGTGCCTATGGAAGAGCCAGGTATGGTGAGGATGCTCTCATTGTTTACAAGGAGATGAAGGAAAAGGGACTGCAGTTAAACGTAATTCTCTACAATACGCTTTTAGCTATGTGTGCTGATGTTGGCTATGTTAATGAGGCTGTTGAAATTTTTCAAGATATGAAGAGTTCTGGCACTTGCTCACCTGACAGTTGGACATTTTCTTCCATGATCACCATATATTCCTGCGGTGGAAAAGTATCAGAGGCTGAAGAAATGTTGAACGATATGGTGGAAGCTGGTTTTGACCCTAATATCTTTGTCTTAACATCACTAATCCAGTGCTATGGGAAAGCTAAACGTGTTGATGATGTAGTGAGGACATTCAATCAATTGATAGAGTTAGGATTAACTCCAGACGATCGATTCTGTGGCTGCCTTCTCAATGTGATTACCCAGACACCAAAAGGGGAACTTGGTAAGCTGATTGATTGTGTTGTGAGAGCTAATCCAAAACTCGGGTTTGTGGTTGAACTCTTGCTAGGGGAGCAAGACAAGGAAGGAAATTTCAGAACTGAAGCCTCAGAACTCTTTAGTGTTGTCAGTGCTGATGTGAGAAAAGCTTACTGCAATTGCTTAATTGATCTCTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAACTACTGGATTTGGGGCTTACACTTCAGATATATAAAGATTTGCAGTCCAGGTCTCCAACTCAGTGGTCTCTTTATCTTAAGGGTCTTTCTCTTGGGGCTGCTCTCACTGCATTACACGTTTGGATAAAGGACTTAACAAAGGTACTTGAATCTGGGGAGGAACTTCCACCATTACTTGGAATAAATACTGGACATGGAAAACACAAGTATTCAGATAAGGGTTTGGCAAGCGTCTTTGAATCACATTTAAAGGAATTAAATGCTCCATTCCATGAGGCTCCAGAAAAGGTCGGATGGTTTTTGACAACTAAAGTGGCAGCAAAATCATGGTTGGAGTCTAGAAGTTCCCCTGAATTGGTTGCAGCATAG

Coding sequence (CDS)

ATGGCGTTCCAGCTCTGCTATTCGCCGCCCACCTTCTTTACCGAACACCATTTCCTTTCCAATTCTCTCACTCCTCAACGTAAAACAACTCTGTCCAACTCCTCTCCTCTTTTCAAGCTCAGTCCCATTCCTCGTCACTCAAAACCGTTCCTCCAAATTACCAATGTCTCGCTACAGGAACACGCTCCTCAAGATACCCAAAATACAATTCCCTCTGCTGATGAAATCTCCAAATACCCAGATTCGAAATCCGGTTCCTCCTCGAACAGCTCCGTTTGGGTCAATCCTAGAAGCCCCAGAGCTTCCAAACTTCGGAAGCAGTCGTACGAAGCAAGATATGCTTCTCTTATTAGAGTATCGGAGTCTTTAGACTCTTCTAATCCATGTGAGGTAGATGTTGCTGATGTCTTGAAGGTGATAGGTAATAACATTTTAGAACGGGACGCTATTTTAGTGCTGAATAACATGTCAAATTCCCAAACTGCGTTGCTTGCTCTTCGCTACTTCCAGGATATGCTGAAATCAAGTAAACAGACAATTTTTTATAACGTGACACTGAAGGTGTTTAGGAAGTGCAGAGATATGGAGGGTGCAGAGAAACTGTTCGAAGAAATGATTAACAGAGGAGTTAAGCCTGATAATGTGACATTTTCTACAATTATTAGTTGTGCTAGGTTGTGTTCTTTACCAAGTAAGGCTGTTGAGTGGTTTGAGAAGATGCCAAGTTTTGACTGTAATCCTGATGATGTTACTTACTCTACGATGATTGATGCCTATGGACGTGCTGGTAATGTTGACATGGCTTTCAGTTTGTATGACCGTGCAAGAACGGAAAACTGGCGAATTGATCCTGCGACATTCTCGACAATGATCAAAATTCATGGAGTGGCTGGGAACTATGATGGGTGCTTGAATGTTTATGAAGAAATGAAGGCTATAGGCATCAAGCCAAACTTGGTTATATATAACTGCTTGTTGGATGCTATGGGTAGGGCTAAAAGACCTTGGCAGATCAAAACCATTTACAAAGAGATGATTAAAAATGGATTTTCACCAAGTTGGGCAACTTATGCTTCTCTTTTACGTGCCTATGGAAGAGCCAGGTATGGTGAGGATGCTCTCATTGTTTACAAGGAGATGAAGGAAAAGGGACTGCAGTTAAACGTAATTCTCTACAATACGCTTTTAGCTATGTGTGCTGATGTTGGCTATGTTAATGAGGCTGTTGAAATTTTTCAAGATATGAAGAGTTCTGGCACTTGCTCACCTGACAGTTGGACATTTTCTTCCATGATCACCATATATTCCTGCGGTGGAAAAGTATCAGAGGCTGAAGAAATGTTGAACGATATGGTGGAAGCTGGTTTTGACCCTAATATCTTTGTCTTAACATCACTAATCCAGTGCTATGGGAAAGCTAAACGTGTTGATGATGTAGTGAGGACATTCAATCAATTGATAGAGTTAGGATTAACTCCAGACGATCGATTCTGTGGCTGCCTTCTCAATGTGATTACCCAGACACCAAAAGGGGAACTTGGTAAGCTGATTGATTGTGTTGTGAGAGCTAATCCAAAACTCGGGTTTGTGGTTGAACTCTTGCTAGGGGAGCAAGACAAGGAAGGAAATTTCAGAACTGAAGCCTCAGAACTCTTTAGTGTTGTCAGTGCTGATGTGAGAAAAGCTTACTGCAATTGCTTAATTGATCTCTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAACTACTGGATTTGGGGCTTACACTTCAGATATATAAAGATTTGCAGTCCAGGTCTCCAACTCAGTGGTCTCTTTATCTTAAGGGTCTTTCTCTTGGGGCTGCTCTCACTGCATTACACGTTTGGATAAAGGACTTAACAAAGGTACTTGAATCTGGGGAGGAACTTCCACCATTACTTGGAATAAATACTGGACATGGAAAACACAAGTATTCAGATAAGGGTTTGGCAAGCGTCTTTGAATCACATTTAAAGGAATTAAATGCTCCATTCCATGAGGCTCCAGAAAAGGTCGGATGGTTTTTGACAACTAAAGTGGCAGCAAAATCATGGTTGGAGTCTAGAAGTTCCCCTGAATTGGTTGCAGCATAG

Protein sequence

MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQEHAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVSESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTIFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA*

Homology

[Close]

BLAST of CsGy1G015090.1 vs. ExPASy Swiss-Prot
Match: Q8GWE0 (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P67 PE=1 SV=3)

HSP 1 Score: 920.6 bits (2378), Expect = 1.1e-266
Identity = 453/702 (64.53%), Postives = 561/702 (79.91%), Query Frame = 0


Query: 5   LCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQEHAPQ 64
           LC SP +   +   L N L+   K+T  +    +  +    HS+  LQ T+VS+QE  PQ
Sbjct: 6   LCSSPSSLLHDPLPLCNLLSVYPKSTPRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQ 65

Query: 65  DTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVSESLD 124
             ++ +   D     P     ++S S VWVNP+SPRAS+LR++SY++RY+SLI+++ESLD
Sbjct: 66  SEKSKLVDVDLPIPEP-----TASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLD 125

Query: 125 SSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTIFYNV 184
           +  P E DV DV+   G  + E+DA++ LNNM+N +TA L L    + +K S++ I YNV
Sbjct: 126 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 185

Query: 185 TLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKMPSFD 244
           T+KVFRK +D+E +EKLF+EM+ RG+KPDN TF+TIISCAR   +P +AVEWFEKM SF 
Sbjct: 186 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG 245

Query: 245 CNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCL 304
           C PD+VT + MIDAYGRAGNVDMA SLYDRARTE WRID  TFST+I+I+GV+GNYDGCL
Sbjct: 246 CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL 305

Query: 305 NVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAY 364
           N+YEEMKA+G+KPNLVIYN L+D+MGRAKRPWQ K IYK++I NGF+P+W+TYA+L+RAY
Sbjct: 306 NIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 365

Query: 365 GRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPD 424
           GRARYG+DAL +Y+EMKEKGL L VILYNTLL+MCAD  YV+EA EIFQDMK+  TC PD
Sbjct: 366 GRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPD 425

Query: 425 SWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFN 484
           SWTFSS+IT+Y+C G+VSEAE  L  M EAGF+P +FVLTS+IQCYGKAK+VDDVVRTF+
Sbjct: 426 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 485

Query: 485 QLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQD-KEGN 544
           Q++ELG+TPDDRFCGCLLNV+TQTP  E+GKLI CV +A PKLG VV++L+ EQ+ +EG 
Sbjct: 486 QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV 545

Query: 545 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRSPTQ 604
           F+ EASEL   + +DV+KAY NCLIDLCVNL+ L++ACE+L LGL   IY  LQS+S TQ
Sbjct: 546 FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ 605

Query: 605 WSLYLKGLSLGAALTALHVWIKDLTK-VLESGEELPPLLGINTGHGKHKYSDKGLASVFE 664
           WSL+LK LSLGAALTALHVW+ DL++  LESGEE PPLLGINTGHGKHKYSDKGLA+VFE
Sbjct: 606 WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE 665

Query: 665 SHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
           SHLKELNAPFHEAP+KVGWFLTT VAAK+WLESR S   V+A
Sbjct: 666 SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702

[Close]

BLAST of CsGy1G015090.1 vs. ExPASy Swiss-Prot
Match: Q10PZ4 (Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0215900 PE=3 SV=1)

HSP 1 Score: 714.5 bits (1843), Expect = 1.2e-204
Identity = 369/671 (54.99%), Postives = 471/671 (70.19%), Query Frame = 0


Query: 40  LSPIPRHSKPFLQITNVSLQEHAPQDTQNTIPSADEISKYPDSKSGSSSNSS--VWVNPR 99
           LS  P++  P      VS+Q+  P       P +D      +   G SSN+S  VWVNP 
Sbjct: 17  LSFQPKNPSPSPATARVSVQDPPP-------PPSD-----ANPSPGRSSNTSRYVWVNPN 76

Query: 100 SPRASKL-RKQSYEARYASLIRVSESLDSSNPCEVDVADVLK-VIGNNILERDAILVLNN 159
           SPRA+ L R ++   R A L   + +L +    E  VA  L+        E+DA++VLN 
Sbjct: 77  SPRAAGLARARAGSGRRARLAAAAAALAACEAGEAPVAAALEAAFPEPPSEQDAVIVLNT 136

Query: 160 MSNSQTA-LLALRYFQDMLKSSKQTIFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDN 219
            S    A +LAL +F    +  K+ I YNV LK  RK R    AE L+EEM+  GV+PDN
Sbjct: 137 TSARPAAVVLALWWFLRNAEVRKEVILYNVALKALRKRRRWSDAEALWEEMLREGVQPDN 196

Query: 220 VTFSTIISCARLCSLPSKAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDR 279
            TFST+ISCAR C +P KAVEWFEKMP F C+PD +TYS +IDAYGRAG+ + A  LYDR
Sbjct: 197 ATFSTVISCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRAGDAETALRLYDR 256

Query: 280 ARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKR 339
           AR E W++DP   +T+I++H  +GN+DG LNV+EEMKA G+KPNLV+YN +LDAMGRA R
Sbjct: 257 ARAEKWQLDPVICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYNTVLDAMGRAMR 316

Query: 340 PWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNT 399
           PW +KTI++E++     P+ ATY  LL AY RARYGEDA+ VY+ MK++ + ++V+LYN 
Sbjct: 317 PWVVKTIHRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDEVMDIDVVLYNM 376

Query: 400 LLAMCADVGYVNEAVEIFQDMKSS--GTCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMV 459
           LL+MCAD+GYV EA EIF+DMK+S      PDSW++SSM+T+YSC G V+ AE +LN+MV
Sbjct: 377 LLSMCADIGYVEEAEEIFRDMKASMDSRSKPDSWSYSSMVTLYSCTGNVAGAEGILNEMV 436

Query: 460 EAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQTPKGE 519
           EAGF PNIF+LTSLI+CYGKA R DDVVR+F  L +LG+TPDDRFCGCLL V   TP  E
Sbjct: 437 EAGFKPNIFILTSLIRCYGKAGRTDDVVRSFAMLEDLGITPDDRFCGCLLTVAAGTPADE 496

Query: 520 LGKLIDCVVRANPKLGFVVELLLGEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCV 579
           LGK+I C+ R++ +LG VV LL+         R  A EL       VR  YCNCL+DL V
Sbjct: 497 LGKVIGCIDRSSAQLGAVVRLLVDAAAPSEPLREAAGELLGGARGVVRMPYCNCLMDLAV 556

Query: 580 NLDLLDKACELLDLGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWIKDLTKVLE 639
           NL  ++KAC LLD+ L L IY ++Q+R+ TQWSL+L+GLS+GAALT LHVW+ DL   L+
Sbjct: 557 NLSQMEKACALLDVALRLGIYSNVQTRTQTQWSLHLRGLSVGAALTTLHVWMSDLYAALQ 616

Query: 640 SGEELPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSW 699
           +G+ELPPLLGI+TG GK+ YS KGLA+VFESHLKEL+APFHEAP+K GWFLTT VAA+ W
Sbjct: 617 AGDELPPLLGIHTGQGKNTYSYKGLATVFESHLKELDAPFHEAPDKAGWFLTTSVAARHW 675

Query: 700 LESRSSPELVA 704
           LE++ S ELVA
Sbjct: 677 LETKKSAELVA 675

[Close]

BLAST of CsGy1G015090.1 vs. ExPASy Swiss-Prot
Match: B4F8Z1 (Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4577 GN=ATP4 PE=2 SV=1)

HSP 1 Score: 709.1 bits (1829), Expect = 4.8e-203
Identity = 376/708 (53.11%), Postives = 485/708 (68.50%), Query Frame = 0


Query: 5   LCYSPPTFFTE--HHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQEHA 64
           LC SP +      H  +S S  P+  +           SP+  H         VS+QE  
Sbjct: 6   LCRSPSSLLPSWPHRPISASFNPKNPS-----------SPVAAH---------VSVQETP 65

Query: 65  PQDTQNTIPSADEISKYPDSKSGSSSNSS-VWVNPRSPRASKL-RKQSYEARYASLIRVS 124
           PQ      PS    S    ++  SSSN+  +WVNP SPRA+ + R ++   R A L   +
Sbjct: 66  PQPQD---PSPPSDSNPNGTRPSSSSNTRFLWVNPNSPRAADVARARAGSGRRARLASAA 125

Query: 125 ESLDSSNPCEVDVADVLK-VIGNNILERDAILVLNN--MSNSQTALLALRYFQDMLKSSK 184
            +L +    E  V   L+        E+DA++VLN    + ++TA+LALR+F    K  K
Sbjct: 126 AALGACETTESAVEAALQAAFPEPPSEQDAVIVLNTAAATRAETAVLALRWFLGNAKVRK 185

Query: 185 QTIFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWF 244
           + I YNV LK+ RK R     E L+ EM+  GV+PDN TFST+ISCAR C L SKAVEWF
Sbjct: 186 KVILYNVVLKLLRKKRLWSETEALWAEMLRDGVQPDNATFSTVISCARACGLHSKAVEWF 245

Query: 245 EKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVA 304
           +KMP F C+PD +TYS +IDAYG AGN + A  LYDRAR E W++DP   ST+IK+H  +
Sbjct: 246 DKMPEFGCSPDMLTYSAVIDAYGHAGNSEAALRLYDRARAEKWQLDPVICSTVIKVHSTS 305

Query: 305 GNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATY 364
           GN+DG LNV+EEMKAIG++PNLV+YN +LDAMGRA RPW +KTI++EM+     PS ATY
Sbjct: 306 GNFDGALNVFEEMKAIGVRPNLVVYNTMLDAMGRALRPWVVKTIHREMVDQQVQPSRATY 365

Query: 365 ASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKS 424
             LL AY RARYGEDA+ VY+ MK++ + ++V+LYN LL+MCAD+GYV+EA EIF+DMK+
Sbjct: 366 CCLLHAYTRARYGEDAMAVYRLMKDEAMGIDVMLYNMLLSMCADIGYVDEAEEIFRDMKA 425

Query: 425 S--GTCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKR 484
           S      PDSW++SSM+T+YS    V  AE +LN+MVEAGF PNIFVLTSLI+CYGK  R
Sbjct: 426 SMGAHSKPDSWSYSSMVTLYSSTANVLSAEGILNEMVEAGFKPNIFVLTSLIRCYGKVGR 485

Query: 485 VDDVVRTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLL 544
            DDVVR+F  L +LG+ PDDRFCGCLL+V   TP  ELGK+I C+ R+N +LG VV+LL+
Sbjct: 486 TDDVVRSFGMLQDLGIIPDDRFCGCLLSVAANTPAEELGKVISCIERSNVQLGAVVKLLV 545

Query: 545 GEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKD 604
                E +FR  A EL       V+  YCNCL+DLCVNL+ ++KAC LLD    L IY +
Sbjct: 546 DRSSSE-SFREAARELLRSSRGVVKMPYCNCLMDLCVNLNQMEKACALLDAAQQLGIYAN 605

Query: 605 LQSRSPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEE-LPPLLGINTGHGKHKYSD 664
           +Q+R+ TQWSL+L+GLS+GAALT LHVW+ DL   L++G E LPPLLGI+TG GK+ YSD
Sbjct: 606 IQTRTQTQWSLHLRGLSVGAALTTLHVWMNDLYTSLQTGNEGLPPLLGIHTGQGKNTYSD 665

Query: 665 KGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELV 703
           +GLA++FE+HLKEL+APFHEAP+K GWFLTT VAAK WLES+++ ELV
Sbjct: 666 RGLAAMFEAHLKELDAPFHEAPDKAGWFLTTNVAAKQWLESKAASELV 689

[Close]

BLAST of CsGy1G015090.1 vs. ExPASy Swiss-Prot
Match: Q9LS25 (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g46580 PE=2 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.0e-131
Identity = 268/709 (37.80%), Postives = 408/709 (57.55%), Query Frame = 0


Query: 2   AFQLCYSPPTFFTEHH--FLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQ 61
           A  +C++P    T+ H  FL  SL  Q ++   N S      P     +P    T    +
Sbjct: 8   AIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISCSSLKQPKTLEEEPITTKTPSLSE 67

Query: 62  EHAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQ-------SYEAR 121
           +  P           +I   P          SVWVNP  P+ S L  Q       SY  +
Sbjct: 68  QLKPLSATTLRQEQTQILSKP---------KSVWVNPTRPKRSVLSLQRQKRSAYSYNPQ 127

Query: 122 YASLIRVSESLDSSNPCE-VDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQD 181
              L   +  L+SS   E  +   +L  I +     +A+LVLN++   Q       + + 
Sbjct: 128 IKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFNWVKS 187

Query: 182 MLKSSKQTIFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPS 241
                 +TIFYNVT+K  R  R  +  E++  EM+  GV+ DN+T+STII+CA+ C+L +
Sbjct: 188 KSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYN 247

Query: 242 KAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMI 301
           KA+EWFE+M      PD+VTYS ++D Y ++G V+   SLY+RA    W+ D   FS + 
Sbjct: 248 KAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLG 307

Query: 302 KIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFS 361
           K+ G AG+YDG   V +EMK++ +KPN+V+YN LL+AMGRA +P   ++++ EM++ G +
Sbjct: 308 KMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLT 367

Query: 362 PSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEI 421
           P+  T  +L++ YG+AR+  DAL +++EMK K   ++ ILYNTLL MCAD+G   EA  +
Sbjct: 368 PNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERL 427

Query: 422 FQDMKSSGTCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYG 481
           F DMK S  C PD++++++M+ IY  GGK  +A E+  +M++AG   N+   T L+QC G
Sbjct: 428 FNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLG 487

Query: 482 KAKRVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQTPKGE-LGKLIDCVVRANPKLGFV 541
           KAKR+DDVV  F+  I+ G+ PDDR CGCLL+V+      E   K++ C+ RAN KL   
Sbjct: 488 KAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTF 547

Query: 542 VELLLGEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTL 601
           V L++ E+ +    + E   + +    + R+ +CNCLID+C   +  ++A ELL LG   
Sbjct: 548 VNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLF 607

Query: 602 QIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKH 661
            +Y  L +++  +WSL ++ LS+GAA TAL  W++ L  +++  EELP L    TG G H
Sbjct: 608 GLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTGTGTH 667

Query: 662 KYSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSP 700
           ++S +GLA+ F  HL++L+APF ++ ++ G F+ TK    SWLES+  P
Sbjct: 668 RFS-QGLANSFALHLQQLSAPFRQS-DRPGIFVATKEDLVSWLESKFPP 705

[Close]

BLAST of CsGy1G015090.1 vs. ExPASy Swiss-Prot
Match: Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 8.6e-51
Identity = 148/567 (26.10%), Postives = 272/567 (47.97%), Query Frame = 0


Query: 167 RYFQDMLKSSKQ--TIFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCA 226
           ++F +M ++  Q   I +N  L V  +    E A  LF+EM NR ++ D  +++T++   
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384

Query: 227 RLCSLPSKAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDP 286
                   A E   +MP     P+ V+YST+ID + +AG  D A +L+   R     +D 
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444

Query: 287 ATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKE 346
            +++T++ I+   G  +  L++  EM ++GIK ++V YN LL   G+  +  ++K ++ E
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504

Query: 347 MIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGY 406
           M +    P+  TY++L+  Y +    ++A+ +++E K  GL+ +V+LY+ L+      G 
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564

Query: 407 VNEAVEIFQDMKSSGTCSPDSWTFSSMITI------------YSCGGKVSEAEEMLNDMV 466
           V  AV +  +M   G  SP+  T++S+I              YS GG +  +   L+ + 
Sbjct: 565 VGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALT 624

Query: 467 EAGFDPNIFVLTSLI---------QCYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLLN 526
           E   +  I +   L           C    + +  ++  F ++ +L + P+      +LN
Sbjct: 625 ETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILN 684

Query: 527 VITQTPKGELGKLIDCVVRA--NPKLGFVVELLLGEQDKEGNFRTEASELFSVVS---AD 586
             ++    E   ++   +R   N   G V  LL+G+++   N   +A  LF  V+     
Sbjct: 685 ACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRE---NVWLQAQSLFDKVNEMDGS 744

Query: 587 VRKAYCNCLIDLCVNLDLLDKACELLDL-GLTLQIYKDLQSRSPTQWSLYLKGLSLGAAL 646
              A+ N L D+  +     +  EL+ L G + Q+++++ S S     L L  +S GAA 
Sbjct: 745 TASAFYNALTDMLWHFG-QKRGAELVALEGRSRQVWENVWSDS----CLDLHLMSSGAAR 804

Query: 647 TALHVWIKDLTKVLESGEELPPLLGINTGHGKHK--YSDKGLASVFESHLKELNAPFHEA 703
             +H W+ ++  ++  G ELP +L I TG GKH     D  L    E  L+ ++APFH +
Sbjct: 805 AMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLS 864

[Close]

BLAST of CsGy1G015090.1 vs. NCBI nr
Match: XP_004139516.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis sativus] >KGN64994.1 hypothetical protein Csa_022775 [Cucumis sativus])

HSP 1 Score: 1406 bits (3640), Expect = 0.0
Identity = 704/704 (100.00%), Postives = 704/704 (100.00%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
           MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE
Sbjct: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60

Query: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
           HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS
Sbjct: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120

Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
           ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
           FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
           LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420

Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
           CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480

Query: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
           RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]

BLAST of CsGy1G015090.1 vs. NCBI nr
Match: XP_008464281.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis melo] >KAA0042345.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK15469.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1354 bits (3504), Expect = 0.0
Identity = 674/704 (95.74%), Postives = 691/704 (98.15%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
           MAFQLC+SPPTFFT HH LSNSLTPQRKTTLSNSSPLFKL+PIPRHS PFLQITN+SLQE
Sbjct: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60

Query: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
           H+PQ+T NTIPS DEISKY D+KSGSSS SSVWVNPRSPRASKLRKQSYEARYASL+R+S
Sbjct: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120

Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
           ESLDS NPCEVDVADVLKVIGNNILE+DA++VLNNMSNSQTALLALRYFQDMLKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
           FYNVTLKVFRKCRDMEGAE+LFEEM+NRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
           LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMK+SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420

Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
           CSPDSWTFSSMITIYSC GKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480

Query: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
           RTFNQLIELGLTPDDRFCGCLLNVITQTPK E+ KLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSLYLKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]

BLAST of CsGy1G015090.1 vs. NCBI nr
Match: XP_038877791.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Benincasa hispida])

HSP 1 Score: 1313 bits (3399), Expect = 0.0
Identity = 654/704 (92.90%), Postives = 678/704 (96.31%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
           MAFQLC+SP TFFT+HH LSNSLT QRKTTL NSS LFKL+PIPRHSKPFLQITNVSLQE
Sbjct: 1   MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQE 60

Query: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
           +APQ+T N  PS DEISKYPD KS SSS SSVWVNPRSPRASKLRKQSYEARYASL R+S
Sbjct: 61  YAPQETHNPSPSNDEISKYPDGKSSSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRIS 120

Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
           ESLDS NPC+ DVADVLK IG+NIL++DA++VLNNMSNSQTALLALRYFQD+LKSSKQ I
Sbjct: 121 ESLDSCNPCQEDVADVLKEIGSNILQQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAI 180

Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
           FYNVTLKVFRKCRDMEGAEKLFEEM+ RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
           LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYV EAVE+FQDMKSSGT
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVYEAVEVFQDMKSSGT 420

Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
           CSPDSWTFSSMITIYSC GKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480

Query: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
           RTF++LIELGLTPDDRFCGCLLNVITQTPK EL KLIDCVVRANPKLGFVV+LL+GEQDK
Sbjct: 481 RTFSRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVKLLMGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQ+YKDLQSRS
Sbjct: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQLYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSLYLKGLSLGA LTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAGLTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]

BLAST of CsGy1G015090.1 vs. NCBI nr
Match: XP_022142513.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Momordica charantia])

HSP 1 Score: 1237 bits (3200), Expect = 0.0
Identity = 618/704 (87.78%), Postives = 652/704 (92.61%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
           MAFQLC+SP TFF++HH LSNSL  Q + TL  SS  FKL+P P HSK  L+ITNVSLQE
Sbjct: 1   MAFQLCHSPSTFFSDHHPLSNSLNSQHRITLRKSSHRFKLNPTPHHSKTCLRITNVSLQE 60

Query: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
           +A Q+ QN IP+ DE SKYPD KS SSS SSVWVNPRSPRASKLR QSYEARYASL R+S
Sbjct: 61  YAAQEAQNPIPTQDESSKYPDGKSNSSSKSSVWVNPRSPRASKLRNQSYEARYASLTRIS 120

Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
           ESLDS NPCE DVADVLK +G+NILE+DA+ VLNNMSNS TALLAL+ FQ +LKSSK+ I
Sbjct: 121 ESLDSCNPCEEDVADVLKGMGSNILEQDAVAVLNNMSNSSTALLALQMFQKVLKSSKKAI 180

Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
            YNVTLKV RK RDMEGAEKLF+EM+ RGVKPDNVTFST+ISCARLCSLP+KAVEWFEKM
Sbjct: 181 LYNVTLKVLRKSRDMEGAEKLFDEMLKRGVKPDNVTFSTVISCARLCSLPNKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFST+IKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTLIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
           LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIF+DMKSSG 
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFEDMKSSGA 420

Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
           CSPDSWTFSSMITIYSC GKVSEAEEMLN+M+EAGFDPNIFVLTSLIQCYGK KRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKGKRVDDVV 480

Query: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
           RTF++L+ELGLTPDDRFCGCLLNVITQTPK EL KLIDCV RAN KLG+VV+LLLGEQDK
Sbjct: 481 RTFDRLVELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANSKLGYVVKLLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EG+ RTEASEL SVVSADVRKAYCNCLIDLCVNLDLL+KACELLDLGLTLQIY  LQS S
Sbjct: 541 EGDLRTEASELLSVVSADVRKAYCNCLIDLCVNLDLLEKACELLDLGLTLQIYTGLQSTS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSL+LKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLHLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 704

[Close]

BLAST of CsGy1G015090.1 vs. NCBI nr
Match: KAG6583722.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1222 bits (3163), Expect = 0.0
Identity = 613/705 (86.95%), Postives = 653/705 (92.62%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTL-SNSSPLFKLSPIPRHSKPFLQITNVSLQ 60
           MAFQL + P TFFT+H    NSLT   KTTL  +SS +FKL+PIP HSKPFLQITNVS Q
Sbjct: 1   MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSSSRVFKLNPIPYHSKPFLQITNVSQQ 60

Query: 61  EHAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRV 120
           E+APQ+T+N  PS DEISK+PD KSGSSS +SVWVNP SPRASKLRKQSYEARYASL ++
Sbjct: 61  EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120

Query: 121 SESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQT 180
           SESLDS NPCE DVADVLK I + ILE+DAI VLNNMSNSQTALL LRYFQD+LKSSKQ 
Sbjct: 121 SESLDSCNPCEDDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVLRYFQDVLKSSKQA 180

Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEK 240
           +FYNVTLKVFRKCRD EGAEKLF+EM+ RGVKPDNVTFSTIISCARLCSLP+KAVEWFEK
Sbjct: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240

Query: 241 MPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 300
           MPSFDCNPD++TYS MIDAYGRAGNVDMAFSLYDRARTENWRID +TFSTMIKIHGVAGN
Sbjct: 241 MPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGN 300

Query: 301 YDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYAS 360
           YDGCLNVYEEMKA+GIKPNL IYN LL AMGRAKRPWQIKTIYKEM KNGFSPSWATYAS
Sbjct: 301 YDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYAS 360

Query: 361 LLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSG 420
           LLRAY RARY ED ++VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA+E+F+DMKSSG
Sbjct: 361 LLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSG 420

Query: 421 TCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
           TCSPDSWTFSSMITIYSC G VSEAEEMLN+M+EAGFDPNIFVLTSLIQCYGKAKRVDDV
Sbjct: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480

Query: 481 VRTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQD 540
           VRTF++L+ELGLTPDDRFCGCLLNVITQTPK EL KLIDCV RANPKLGFVV+LLLGE+D
Sbjct: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKD 540

Query: 541 KEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSR 600
            EG+FRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELLDLGL++QIY DLQSR
Sbjct: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600

Query: 601 SPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS 660
           SPTQWSLYLKGLSLGAALTALHVWI DLTK L+SGEELPPLLGINTGHGKHKYSDKGL+S
Sbjct: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660

Query: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
           VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701

[Close]

BLAST of CsGy1G015090.1 vs. ExPASy TrEMBL
Match: A0A0A0LVP1 (Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=3 SV=1)

HSP 1 Score: 1406 bits (3640), Expect = 0.0
Identity = 704/704 (100.00%), Postives = 704/704 (100.00%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
           MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE
Sbjct: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60

Query: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
           HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS
Sbjct: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120

Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
           ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
           FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
           LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420

Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
           CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480

Query: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
           RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]

BLAST of CsGy1G015090.1 vs. ExPASy TrEMBL
Match: A0A5A7TLM5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00400 PE=3 SV=1)

HSP 1 Score: 1354 bits (3504), Expect = 0.0
Identity = 674/704 (95.74%), Postives = 691/704 (98.15%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
           MAFQLC+SPPTFFT HH LSNSLTPQRKTTLSNSSPLFKL+PIPRHS PFLQITN+SLQE
Sbjct: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60

Query: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
           H+PQ+T NTIPS DEISKY D+KSGSSS SSVWVNPRSPRASKLRKQSYEARYASL+R+S
Sbjct: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120

Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
           ESLDS NPCEVDVADVLKVIGNNILE+DA++VLNNMSNSQTALLALRYFQDMLKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
           FYNVTLKVFRKCRDMEGAE+LFEEM+NRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
           LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMK+SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420

Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
           CSPDSWTFSSMITIYSC GKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480

Query: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
           RTFNQLIELGLTPDDRFCGCLLNVITQTPK E+ KLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSLYLKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]

BLAST of CsGy1G015090.1 vs. ExPASy TrEMBL
Match: A0A1S3CL39 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502208 PE=3 SV=1)

HSP 1 Score: 1354 bits (3504), Expect = 0.0
Identity = 674/704 (95.74%), Postives = 691/704 (98.15%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
           MAFQLC+SPPTFFT HH LSNSLTPQRKTTLSNSSPLFKL+PIPRHS PFLQITN+SLQE
Sbjct: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60

Query: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
           H+PQ+T NTIPS DEISKY D+KSGSSS SSVWVNPRSPRASKLRKQSYEARYASL+R+S
Sbjct: 61  HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120

Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
           ESLDS NPCEVDVADVLKVIGNNILE+DA++VLNNMSNSQTALLALRYFQDMLKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180

Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
           FYNVTLKVFRKCRDMEGAE+LFEEM+NRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
           LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMK+SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420

Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
           CSPDSWTFSSMITIYSC GKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480

Query: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
           RTFNQLIELGLTPDDRFCGCLLNVITQTPK E+ KLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSLYLKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]

BLAST of CsGy1G015090.1 vs. ExPASy TrEMBL
Match: A0A6J1CNE5 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012613 PE=3 SV=1)

HSP 1 Score: 1237 bits (3200), Expect = 0.0
Identity = 618/704 (87.78%), Postives = 652/704 (92.61%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
           MAFQLC+SP TFF++HH LSNSL  Q + TL  SS  FKL+P P HSK  L+ITNVSLQE
Sbjct: 1   MAFQLCHSPSTFFSDHHPLSNSLNSQHRITLRKSSHRFKLNPTPHHSKTCLRITNVSLQE 60

Query: 61  HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
           +A Q+ QN IP+ DE SKYPD KS SSS SSVWVNPRSPRASKLR QSYEARYASL R+S
Sbjct: 61  YAAQEAQNPIPTQDESSKYPDGKSNSSSKSSVWVNPRSPRASKLRNQSYEARYASLTRIS 120

Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
           ESLDS NPCE DVADVLK +G+NILE+DA+ VLNNMSNS TALLAL+ FQ +LKSSK+ I
Sbjct: 121 ESLDSCNPCEEDVADVLKGMGSNILEQDAVAVLNNMSNSSTALLALQMFQKVLKSSKKAI 180

Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
            YNVTLKV RK RDMEGAEKLF+EM+ RGVKPDNVTFST+ISCARLCSLP+KAVEWFEKM
Sbjct: 181 LYNVTLKVLRKSRDMEGAEKLFDEMLKRGVKPDNVTFSTVISCARLCSLPNKAVEWFEKM 240

Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
           PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFST+IKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTLIKIHGVAGNY 300

Query: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
           DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360

Query: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
           LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIF+DMKSSG 
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFEDMKSSGA 420

Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
           CSPDSWTFSSMITIYSC GKVSEAEEMLN+M+EAGFDPNIFVLTSLIQCYGK KRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKGKRVDDVV 480

Query: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
           RTF++L+ELGLTPDDRFCGCLLNVITQTPK EL KLIDCV RAN KLG+VV+LLLGEQDK
Sbjct: 481 RTFDRLVELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANSKLGYVVKLLLGEQDK 540

Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
           EG+ RTEASEL SVVSADVRKAYCNCLIDLCVNLDLL+KACELLDLGLTLQIY  LQS S
Sbjct: 541 EGDLRTEASELLSVVSADVRKAYCNCLIDLCVNLDLLEKACELLDLGLTLQIYTGLQSTS 600

Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
           PTQWSL+LKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLHLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660

Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
           FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 704

[Close]

BLAST of CsGy1G015090.1 vs. ExPASy TrEMBL
Match: A0A6J1EHV4 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434309 PE=3 SV=1)

HSP 1 Score: 1222 bits (3161), Expect = 0.0
Identity = 613/705 (86.95%), Postives = 652/705 (92.48%), Query Frame = 0


Query: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNS-SPLFKLSPIPRHSKPFLQITNVSLQ 60
           MAFQL + P TFFT+H    NSLT   KTTL  S S +FKL+PIP HSKPFLQITNVS Q
Sbjct: 1   MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQ 60

Query: 61  EHAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRV 120
           E+APQ+T+N  PS DEISK+PD KSGSSS +SVWVNP SPRASKLRKQSYEARYASL ++
Sbjct: 61  EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120

Query: 121 SESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQT 180
           SESLDS NPCEVDVADVLK I + ILE+DAI VLNNMSNSQTALL  RYFQD+LKSSKQ 
Sbjct: 121 SESLDSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQA 180

Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEK 240
           +FYNVTLKVFRKCRD EGAEKLF+EM+ RGVKPDNVTFSTIISCARLCSLP+KAVEWFEK
Sbjct: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240

Query: 241 MPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 300
           MPSFDCNPD++TYS MIDAYGRAGNVDMAFSLYDRARTENWRID +TFSTMIKIHGVAGN
Sbjct: 241 MPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGN 300

Query: 301 YDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYAS 360
           YDGCLNVYEEMKA+GIKPNL IYN LL AMGRAKRPWQIKTIYKEM KNGFSPSWATYAS
Sbjct: 301 YDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYAS 360

Query: 361 LLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSG 420
           LLRAY RARY ED ++VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA+E+F+DMKSSG
Sbjct: 361 LLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSG 420

Query: 421 TCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
           TCSPDSWTFSSMITIYSC G VSEAEEMLN+M+EAGFDPNIFVLTSLIQCYGKAKRVDDV
Sbjct: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480

Query: 481 VRTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQD 540
           VRTF++L+ELGLTPDDRFCGCLLNVITQTPK EL KLIDCV RANPKLGFVV+LLLGE+D
Sbjct: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKD 540

Query: 541 KEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSR 600
            EG+FRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELLDLGL++QIY DLQSR
Sbjct: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600

Query: 601 SPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS 660
           SPTQWSLYLKGLSLGAALTALHVWI DLTK L+SGEELPPLLGINTGHGKHKYSDKGL+S
Sbjct: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660

Query: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
           VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701

[Close]

BLAST of CsGy1G015090.1 vs. TAIR 10
Match: AT4G16390.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 920.6 bits (2378), Expect = 7.5e-268
Identity = 453/702 (64.53%), Postives = 561/702 (79.91%), Query Frame = 0


Query: 5   LCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQEHAPQ 64
           LC SP +   +   L N L+   K+T  +    +  +    HS+  LQ T+VS+QE  PQ
Sbjct: 6   LCSSPSSLLHDPLPLCNLLSVYPKSTPRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQ 65

Query: 65  DTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVSESLD 124
             ++ +   D     P     ++S S VWVNP+SPRAS+LR++SY++RY+SLI+++ESLD
Sbjct: 66  SEKSKLVDVDLPIPEP-----TASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLD 125

Query: 125 SSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTIFYNV 184
           +  P E DV DV+   G  + E+DA++ LNNM+N +TA L L    + +K S++ I YNV
Sbjct: 126 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 185

Query: 185 TLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKMPSFD 244
           T+KVFRK +D+E +EKLF+EM+ RG+KPDN TF+TIISCAR   +P +AVEWFEKM SF 
Sbjct: 186 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG 245

Query: 245 CNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCL 304
           C PD+VT + MIDAYGRAGNVDMA SLYDRARTE WRID  TFST+I+I+GV+GNYDGCL
Sbjct: 246 CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL 305

Query: 305 NVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAY 364
           N+YEEMKA+G+KPNLVIYN L+D+MGRAKRPWQ K IYK++I NGF+P+W+TYA+L+RAY
Sbjct: 306 NIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 365

Query: 365 GRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPD 424
           GRARYG+DAL +Y+EMKEKGL L VILYNTLL+MCAD  YV+EA EIFQDMK+  TC PD
Sbjct: 366 GRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPD 425

Query: 425 SWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFN 484
           SWTFSS+IT+Y+C G+VSEAE  L  M EAGF+P +FVLTS+IQCYGKAK+VDDVVRTF+
Sbjct: 426 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 485

Query: 485 QLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQD-KEGN 544
           Q++ELG+TPDDRFCGCLLNV+TQTP  E+GKLI CV +A PKLG VV++L+ EQ+ +EG 
Sbjct: 486 QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV 545

Query: 545 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRSPTQ 604
           F+ EASEL   + +DV+KAY NCLIDLCVNL+ L++ACE+L LGL   IY  LQS+S TQ
Sbjct: 546 FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ 605

Query: 605 WSLYLKGLSLGAALTALHVWIKDLTK-VLESGEELPPLLGINTGHGKHKYSDKGLASVFE 664
           WSL+LK LSLGAALTALHVW+ DL++  LESGEE PPLLGINTGHGKHKYSDKGLA+VFE
Sbjct: 606 WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE 665

Query: 665 SHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
           SHLKELNAPFHEAP+KVGWFLTT VAAK+WLESR S   V+A
Sbjct: 666 SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702

[Close]

BLAST of CsGy1G015090.1 vs. TAIR 10
Match: AT5G46580.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 472.2 bits (1214), Expect = 7.1e-133
Identity = 268/709 (37.80%), Postives = 408/709 (57.55%), Query Frame = 0


Query: 2   AFQLCYSPPTFFTEHH--FLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQ 61
           A  +C++P    T+ H  FL  SL  Q ++   N S      P     +P    T    +
Sbjct: 8   AIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISCSSLKQPKTLEEEPITTKTPSLSE 67

Query: 62  EHAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQ-------SYEAR 121
           +  P           +I   P          SVWVNP  P+ S L  Q       SY  +
Sbjct: 68  QLKPLSATTLRQEQTQILSKP---------KSVWVNPTRPKRSVLSLQRQKRSAYSYNPQ 127

Query: 122 YASLIRVSESLDSSNPCE-VDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQD 181
              L   +  L+SS   E  +   +L  I +     +A+LVLN++   Q       + + 
Sbjct: 128 IKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFNWVKS 187

Query: 182 MLKSSKQTIFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPS 241
                 +TIFYNVT+K  R  R  +  E++  EM+  GV+ DN+T+STII+CA+ C+L +
Sbjct: 188 KSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYN 247

Query: 242 KAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMI 301
           KA+EWFE+M      PD+VTYS ++D Y ++G V+   SLY+RA    W+ D   FS + 
Sbjct: 248 KAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLG 307

Query: 302 KIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFS 361
           K+ G AG+YDG   V +EMK++ +KPN+V+YN LL+AMGRA +P   ++++ EM++ G +
Sbjct: 308 KMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLT 367

Query: 362 PSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEI 421
           P+  T  +L++ YG+AR+  DAL +++EMK K   ++ ILYNTLL MCAD+G   EA  +
Sbjct: 368 PNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERL 427

Query: 422 FQDMKSSGTCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYG 481
           F DMK S  C PD++++++M+ IY  GGK  +A E+  +M++AG   N+   T L+QC G
Sbjct: 428 FNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLG 487

Query: 482 KAKRVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQTPKGE-LGKLIDCVVRANPKLGFV 541
           KAKR+DDVV  F+  I+ G+ PDDR CGCLL+V+      E   K++ C+ RAN KL   
Sbjct: 488 KAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTF 547

Query: 542 VELLLGEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTL 601
           V L++ E+ +    + E   + +    + R+ +CNCLID+C   +  ++A ELL LG   
Sbjct: 548 VNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLF 607

Query: 602 QIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKH 661
            +Y  L +++  +WSL ++ LS+GAA TAL  W++ L  +++  EELP L    TG G H
Sbjct: 608 GLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTGTGTH 667

Query: 662 KYSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSP 700
           ++S +GLA+ F  HL++L+APF ++ ++ G F+ TK    SWLES+  P
Sbjct: 668 RFS-QGLANSFALHLQQLSAPFRQS-DRPGIFVATKEDLVSWLESKFPP 705

[Close]

BLAST of CsGy1G015090.1 vs. TAIR 10
Match: AT2G31400.1 (genomes uncoupled 1 )

HSP 1 Score: 203.4 bits (516), Expect = 6.1e-52
Identity = 148/567 (26.10%), Postives = 272/567 (47.97%), Query Frame = 0


Query: 167 RYFQDMLKSSKQ--TIFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCA 226
           ++F +M ++  Q   I +N  L V  +    E A  LF+EM NR ++ D  +++T++   
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384

Query: 227 RLCSLPSKAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDP 286
                   A E   +MP     P+ V+YST+ID + +AG  D A +L+   R     +D 
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444

Query: 287 ATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKE 346
            +++T++ I+   G  +  L++  EM ++GIK ++V YN LL   G+  +  ++K ++ E
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504

Query: 347 MIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGY 406
           M +    P+  TY++L+  Y +    ++A+ +++E K  GL+ +V+LY+ L+      G 
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564

Query: 407 VNEAVEIFQDMKSSGTCSPDSWTFSSMITI------------YSCGGKVSEAEEMLNDMV 466
           V  AV +  +M   G  SP+  T++S+I              YS GG +  +   L+ + 
Sbjct: 565 VGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALT 624

Query: 467 EAGFDPNIFVLTSLI---------QCYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLLN 526
           E   +  I +   L           C    + +  ++  F ++ +L + P+      +LN
Sbjct: 625 ETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILN 684

Query: 527 VITQTPKGELGKLIDCVVRA--NPKLGFVVELLLGEQDKEGNFRTEASELFSVVS---AD 586
             ++    E   ++   +R   N   G V  LL+G+++   N   +A  LF  V+     
Sbjct: 685 ACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRE---NVWLQAQSLFDKVNEMDGS 744

Query: 587 VRKAYCNCLIDLCVNLDLLDKACELLDL-GLTLQIYKDLQSRSPTQWSLYLKGLSLGAAL 646
              A+ N L D+  +     +  EL+ L G + Q+++++ S S     L L  +S GAA 
Sbjct: 745 TASAFYNALTDMLWHFG-QKRGAELVALEGRSRQVWENVWSDS----CLDLHLMSSGAAR 804

Query: 647 TALHVWIKDLTKVLESGEELPPLLGINTGHGKHK--YSDKGLASVFESHLKELNAPFHEA 703
             +H W+ ++  ++  G ELP +L I TG GKH     D  L    E  L+ ++APFH +
Sbjct: 805 AMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLS 864

[Close]

BLAST of CsGy1G015090.1 vs. TAIR 10
Match: AT1G74750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 166.4 bits (420), Expect = 8.3e-41
Identity = 113/495 (22.83%), Postives = 227/495 (45.86%), Query Frame = 0


Query: 209 GVKPDNVTFSTIISCARLCSLPSKAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMA 268
           G K D  T++T++          +  +  ++M    C P+ VTY+ +I +YGRA  +  A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413

Query: 269 FSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDA 328
            +++++ +      D  T+ T+I IH  AG  D  +++Y+ M+  G+ P+   Y+ +++ 
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473

Query: 329 MGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLN 388
           +G+A        ++ EM+  G +P+  T+  ++  + +AR  E AL +Y++M+  G Q +
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533

Query: 389 VILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPDSWTFSSMITIYSCGGKVSEAEEML 448
            + Y+ ++ +    G++ EA  +F +M+      PD   +  ++ ++   G V +A +  
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYGLLVDLWGKAGNVDKAWQWY 593

Query: 449 NDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQT 508
             M++AG  PN+    SL+  + +  R+ +       ++ LGL P  +    LL+  T  
Sbjct: 594 QAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDA 653

Query: 509 ----PKGELGKLIDCVVRANPKLGFVVELLLGEQDKEGNFRTEASELFSVVSADVR---K 568
                 G  G+L+   V  +P   F++++     D +   R   S     + ++ R   +
Sbjct: 654 RSNFDMGFCGQLM--AVSGHPAHMFLLKMPPAGPDGQ-KVRDHVSNFLDFMHSEDRESKR 713

Query: 569 AYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKD-LQSRSPTQWSLYLKGLSLGAALTAL 628
              + ++D      L ++A  + ++     +Y D L+ +S + W + L  +S G A+ AL
Sbjct: 714 GLMDAVVDFLHKSGLKEEAGSVWEVAAGKNVYPDALREKSYSYWLINLHVMSEGTAVIAL 773

Query: 629 HVWIKDLTKVLESGEELPPLLGINTGHGKHK--YSDKGLASVFESHLKELNAPFHEAPEK 688
              +    K +    + P  + I TG G+         +    E  L   N PF      
Sbjct: 774 SRTLAWFRKQMLVSGDCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFNFPFFTENGN 833

Query: 689 VGWFLTTKVAAKSWL 694
            G F+ +    K+WL
Sbjct: 834 SGCFVGSGEPLKNWL 844

[Close]

BLAST of CsGy1G015090.1 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 164.9 bits (416), Expect = 2.4e-40
Identity = 100/350 (28.57%), Postives = 176/350 (50.29%), Query Frame = 0


Query: 164 LALRYFQDMLKSSK-QTIFYNVTLKVFRKCRDMEG----AEKLFEEMINRGVKPDNVTFS 223
           LALR F   +K    Q++  N  + +       EG    A  +F  +   G   D  +++
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYT 212

Query: 224 TIISCARLCSLPSKAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNV-DMAFSLYDRART 283
           ++IS         +AV  F+KM    C P  +TY+ +++ +G+ G   +   SL ++ ++
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272

Query: 284 ENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQ 343
           +    D  T++T+I        +     V+EEMKA G   + V YN LLD  G++ RP +
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332

Query: 344 IKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLA 403
              +  EM+ NGFSPS  TY SL+ AY R    ++A+ +  +M EKG + +V  Y TLL+
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392

Query: 404 MCADVGYVNEAVEIFQDMKSSGTCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFD 463
                G V  A+ IF++M+++G C P+  TF++ I +Y   GK +E  ++ +++   G  
Sbjct: 393 GFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 452

Query: 464 PNIFVLTSLIQCYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQ 508
           P+I    +L+  +G+     +V   F ++   G  P+      L++  ++
Sbjct: 453 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501

The following BLAST results are available for this feature:

BLAST of CsGy1G015090.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWE0	1.1e-266	64.53	Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidop...	[more]
Q10PZ4	1.2e-204	54.99	Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza...	[more]
B4F8Z1	4.8e-203	53.11	Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4...	[more]
Q9LS25	1.0e-131	37.80	Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidop...	[more]
Q9SIC9	8.6e-51	26.10	Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop...	[more]

BLAST of CsGy1G015090.1 vs. NCBI nr


Match Name	Identity	Description
XP_004139516.1	100.00	pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis sa...	[more]
XP_008464281.1	95.74	PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic ...	[more]
XP_038877791.1	92.90	pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Benincasa ...	[more]
XP_022142513.1	87.78	pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Momordica ...	[more]
KAG6583722.1	86.95	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]

BLAST of CsGy1G015090.1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0LVP1	100.00	Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=3 SV...	[more]
A0A5A7TLM5	95.74	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CL39	95.74	pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis ...	[more]
A0A6J1CNE5	87.78	pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Momordic...	[more]
A0A6J1EHV4	86.95	pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbit...	[more]

BLAST of CsGy1G015090.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16390.1	7.5e-268	64.53	pentatricopeptide (PPR) repeat-containing protein	[more]
AT5G46580.1	7.1e-133	37.80	pentatricopeptide (PPR) repeat-containing protein	[more]
AT2G31400.1	6.1e-52	26.10	genomes uncoupled 1	[more]
AT1G74750.1	8.3e-41	22.83	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G02860.1	2.4e-40	28.57	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002625	Smr domain	SMART	SM00463	SMR_2	coord: 603..693 e-value: 2.8E-14 score: 63.4
IPR002625	Smr domain	PROSITE	PS50828	SMR	coord: 606..690 score: 16.564125
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 372..523 e-value: 8.3E-36 score: 126.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 268..371 e-value: 4.8E-25 score: 90.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 115..259 e-value: 1.2E-27 score: 98.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 308..365 e-value: 1.7E-9 score: 37.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 286..318 e-value: 4.2E-5 score: 21.4 coord: 427..459 e-value: 1.0E-6 score: 26.5 coord: 463..494 e-value: 5.8E-6 score: 24.2 coord: 391..424 e-value: 6.2E-6 score: 24.1 coord: 320..354 e-value: 1.4E-5 score: 23.0 coord: 182..213 e-value: 1.7E-5 score: 22.7 coord: 356..388 e-value: 7.2E-6 score: 23.9 coord: 250..283 e-value: 6.9E-8 score: 30.2 coord: 215..248 e-value: 0.0014 score: 16.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 179..223 e-value: 5.0E-11 score: 42.6 coord: 247..292 e-value: 2.8E-9 score: 37.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 213..247 score: 8.604678
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 318..352 score: 10.764054
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 178..212 score: 10.785976
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 248..282 score: 11.016164
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 388..422 score: 10.687325
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 459..493 score: 10.424253
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 424..458 score: 11.421732
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 283..317 score: 10.961357
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 353..387 score: 10.490022
IPR033443	Pentacotripeptide-repeat region of PRORP	PFAM	PF17177	PPR_long	coord: 372..508 e-value: 4.5E-12 score: 45.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..97
None	No IPR available	PANTHER	PTHR47447:SF8	PENTATRICOPEPTIDE REPEAT PROTEIN-RELATED	coord: 45..703
None	No IPR available	PANTHER	PTHR47447	OS03G0856100 PROTEIN	coord: 45..703
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 293..492

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy1G015090	CsGy1G015090	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G015090.1.exon1	CsGy1G015090.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy1G015090.1	cds.CsGy1G015090.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy1G015090.1	CsGy1G015090.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0031425	chloroplast RNA processing
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003729	mRNA binding