CsGy1G014885.1 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G014885.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	receptor-like kinase TMK3
Location	Gy14Chr1: 10801839 .. 10802487 (+)
Sequence length	612
RNA-Seq Expression	CsGy1G014885.1
Synteny	CsGy1G014885.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGATGACAAGTTGGGGCTGTGTATCTCTCTCATTTTGTTGTGTCTTTCAACTGTTTGTTTTTGTACCTCTGACATAAATGATGTCAAAATTCTGAATGATTTCAGAGAGGGCTTGGAAAATCCAGAGCTTCTCAAATGGCCTGATAATGGGGATGACCCATGCGGGATCCCTCCATGGCCTCATGTTTACTGTGCAGGTGATAGAGTTTCTCAGATTTAGGTTCAGGGTTTGGGTCTAAAAGGGCCCTTGCCTCAGAATTTTAACCAGCTCTCTAAGCTCTCCAATTTGGGTCTTTGAATATAATCCTTTTAATGCCGCTGTTGATGAGCTTGCCAAGTCAGTTCAGCTCACAAATCTTTCACTGGTGCAGAGTAATCTGGCTGGACCTCTCCCTGAGTTCTTGGGGACATTGTCATCACTAACAACTTTGAAGCTTTCCTATAACAGGTTAACAGGTCAAATTCCTAAAAGTTTTGGTCAGTTTTTTATGCAGATTTTGTGGCTAAATGATCAAGATATAGGAATGACCGGTCCGATTGACGCAATTTCATCAATGTCTTCTTTGACTCAACTATGGCTTCATGGAAACCAGTTCTCAGGGGTTATCCCTCAAAATATTGGGGATCTTAGTATCTTTGTATGA

mRNA sequence

ATGGTGGATGACAAGTTGGGGCTGTGTATCTCTCTCATTTTGTTGTGTCTTTCAACTGTTTGTTTTTGTACCTCTGACATAAATGATGTCAAAATTCTGAATGATTTCAGAGAGGGCTTGGAAAATCCAGAGCTTCTCAAATGGCCTGATAATGGGGATGACCCATGCGGGATCCCTCCATGGCCTCATGTTTACTGTGCAGGTGATAGAGGCCCTTGCCTCAGAATTTTAACCAGCTCTCTAAGCTCTCCAATTTGGGTCTTTGAATATAATCCTTTTAATGCCGCTGTTGATGAGCTTGCCAAGTCAGTTCAGCTCACAAATCTTTCACTGGTGCAGAGTAATCTGGCTGGACCTCTCCCTGAGTTCTTGGGGACATTGTCATCACTAACAACTTTGAAGCTTTCCTATAACAGGTTAACAGGTCAAATTCCTAAAAGTTTTGGTCAGTTTTTTATGCAGATTTTGTGGCTAAATGATCAAGATATAGGAATGACCGGTCCGATTGACGCAATTTCATCAATGTCTTCTTTGACTCAACTATGGCTTCATGGAAACCAGTTCTCAGGGGTTATCCCTCAAAATATTGGGGATCTTAGTATCTTTGTATGA

Coding sequence (CDS)

ATGGTGGATGACAAGTTGGGGCTGTGTATCTCTCTCATTTTGTTGTGTCTTTCAACTGTTTGTTTTTGTACCTCTGACATAAATGATGTCAAAATTCTGAATGATTTCAGAGAGGGCTTGGAAAATCCAGAGCTTCTCAAATGGCCTGATAATGGGGATGACCCATGCGGGATCCCTCCATGGCCTCATGTTTACTGTGCAGGTGATAGAGGCCCTTGCCTCAGAATTTTAACCAGCTCTCTAAGCTCTCCAATTTGGGTCTTTGAATATAATCCTTTTAATGCCGCTGTTGATGAGCTTGCCAAGTCAGTTCAGCTCACAAATCTTTCACTGGTGCAGAGTAATCTGGCTGGACCTCTCCCTGAGTTCTTGGGGACATTGTCATCACTAACAACTTTGAAGCTTTCCTATAACAGGTTAACAGGTCAAATTCCTAAAAGTTTTGGTCAGTTTTTTATGCAGATTTTGTGGCTAAATGATCAAGATATAGGAATGACCGGTCCGATTGACGCAATTTCATCAATGTCTTCTTTGACTCAACTATGGCTTCATGGAAACCAGTTCTCAGGGGTTATCCCTCAAAATATTGGGGATCTTAGTATCTTTGTATGA

Protein sequence

MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPPWPHVYCAGDRGPCLRILTSSLSSPIWVFEYNPFNAAVDELAKSVQLTNLSLVQSNLAGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDAISSMSSLTQLWLHGNQFSGVIPQNIGDLSIFV*

Homology

[Close]

BLAST of CsGy1G014885.1 vs. ExPASy Swiss-Prot
Match: Q9LK43 (Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.2e-22
Identity = 51/108 (47.22%), Postives = 73/108 (67.59%), Query Frame = 0


Query: 99  ELAKSVQLTNLSLVQSNLAGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWL 158
           EL  S  LT + L  +N+AG LP+   +L+SL  L+LSYN +TG +P S G+  +Q LW+
Sbjct: 153 ELVDSTSLTTIYLDNTNIAGVLPDIFDSLASLQNLRLSYNNITGVLPPSLGKSSIQNLWI 212

Query: 159 NDQDIGMTGPIDAISSMSSLTQLWLHGNQFSGVIP-----QNIGDLSI 202
           N+QD+GM+G I+ +SSM+SL+Q WLH N F G IP     +N+ DL +
Sbjct: 213 NNQDLGMSGTIEVLSSMTSLSQAWLHKNHFFGPIPDLSKSENLFDLQL 260

[Close]

BLAST of CsGy1G014885.1 vs. ExPASy Swiss-Prot
Match: Q9SIT1 (Receptor-like kinase TMK3 OS=Arabidopsis thaliana OX=3702 GN=TMK3 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.8e-15
Identity = 50/119 (42.02%), Postives = 72/119 (60.50%), Query Frame = 0


Query: 89  EYNPFNAAV--DELAKSVQLTNLSLVQSNLAGPLPEFLG--TLSSLTTLKLSYNRLTGQI 148
           E NPF+  V  D + ++  L NL+L   ++ G +P+F G  +L SLT LKLS N L G++
Sbjct: 144 ENNPFDPWVIPDTVKEATSLQNLTLSNCSIIGKIPDFFGSQSLPSLTNLKLSQNGLEGEL 203

Query: 149 PKSFGQFFMQILWLNDQDIGMTGPIDAISSMSSLTQLWLHGNQFSGVIPQNIGDLSIFV 204
           P SF    +Q L+LN Q   + G I  + +M+SL ++ L GNQFSG IP   G +S+ V
Sbjct: 204 PMSFAGTSIQSLFLNGQK--LNGSISVLGNMTSLVEVSLQGNQFSGPIPDLSGLVSLRV 260

[Close]

BLAST of CsGy1G014885.1 vs. ExPASy Swiss-Prot
Match: Q9FYK0 (Receptor-like kinase TMK2 OS=Arabidopsis thaliana OX=3702 GN=TMK2 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.6e-13
Identity = 47/118 (39.83%), Postives = 66/118 (55.93%), Query Frame = 0


Query: 91  NPFNAAV--DELAKSVQLTNLSLVQSNLAGPLPEFL---GTLSSLTTLKLSYNRLTGQIP 150
           NPF++ V    L  +  L + S V  NL+G +P++L      SSLTTLKLSYN L  + P
Sbjct: 141 NPFDSWVIPPSLENATSLVDFSAVNCNLSGKIPDYLFEGKDFSSLTTLKLSYNSLVCEFP 200

Query: 151 KSFGQFFMQILWLNDQD--IGMTGPIDAISSMSSLTQLWLHGNQFSGVIPQNIGDLSI 202
            +F    +Q+L LN Q     + G I  +  M+SLT + L GN FSG +P   G +S+
Sbjct: 201 MNFSDSRVQVLMLNGQKGREKLHGSISFLQKMTSLTNVTLQGNSFSGPLPDFSGLVSL 258

[Close]

BLAST of CsGy1G014885.1 vs. ExPASy Swiss-Prot
Match: P43298 (Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.0e-13
Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 91  NPFNA--AVDELAKSVQLTNLSLVQSNLAGPLPEFLG--TLSSLTTLKLSYNRLTGQIPK 150
           NPF +    + L  +  L N S   +N++G LP FLG      L+ L L++N L G++P 
Sbjct: 145 NPFKSWEIPESLRNASALQNFSANSANVSGSLPGFLGPDEFPGLSILHLAFNNLEGELPM 204

Query: 151 SFGQFFMQILWLNDQDIGMTGPIDAISSMSSLTQLWLHGNQFSGVIPQNIG 198
           S     +Q LWLN Q   +TG I  + +M+ L ++WLH N+FSG +P   G
Sbjct: 205 SLAGSQVQSLWLNGQK--LTGDITVLQNMTGLKEVWLHSNKFSGPLPDFSG 253

[Close]

BLAST of CsGy1G014885.1 vs. ExPASy Swiss-Prot
Match: Q9LH52 (Leucine-rich repeat protein FLOR 1 OS=Arabidopsis thaliana OX=3702 GN=FLR1 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.9e-12
Identity = 58/206 (28.16%), Postives = 93/206 (45.15%), Query Frame = 0


Query: 6   LGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPPWPHVY 65
           L +  S++ + L +   CT   ND   L   ++ L NP LL   +   D C    W  V 
Sbjct: 7   LSIFFSILFITLPSSYSCTE--NDKNALLQIKKALGNPPLLSSWNPRTDCC--TGWTGVE 66

Query: 66  CAGDRGPCLRILTSSLSSPIWV------------FEYNPF--NAAVDELAKSVQLTNLSL 125
           C   R   L + +  +S  I              F Y P         + K   L  L L
Sbjct: 67  CTNRRVTGLSVTSGEVSGQISYQIGDLVDLRTLDFSYLPHLTGNIPRTITKLKNLNTLYL 126

Query: 126 VQSNLAGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQF-FMQILWLNDQDIGMTGPID 185
             ++L+GP+P+++  L SLT L LS+N+ TG IP S  Q   ++ + +ND  +  + P  
Sbjct: 127 KHTSLSGPIPDYISELKSLTFLDLSFNQFTGPIPGSLSQMPKLEAIQINDNKLTGSIPNS 186

Query: 186 AISSMSSLTQLWLHGNQFSGVIPQNI 197
             S + ++  L+L  N+ SG IP+++
Sbjct: 187 FGSFVGNVPNLYLSNNKLSGKIPESL 208

[Close]

BLAST of CsGy1G014885.1 vs. NCBI nr
Match: KGN64970.1 (hypothetical protein Csa_022794 [Cucumis sativus])

HSP 1 Score: 416 bits (1070), Expect = 6.67e-147
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP
Sbjct: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60

Query: 61  WPHVYCAGDRGPCLRILTSSLSSPIWVFEYNPFNAAVDELAKSVQLTNLSLVQSNLAGPL 120
           WPHVYCAGDRGPCLRILTSSLSSPIWVFEYNPFNAAVDELAKSVQLTNLSLVQSNLAGPL
Sbjct: 61  WPHVYCAGDRGPCLRILTSSLSSPIWVFEYNPFNAAVDELAKSVQLTNLSLVQSNLAGPL 120

Query: 121 PEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDAISSMSSLTQ 180
           PEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPID ISSMSSLTQ
Sbjct: 121 PEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDVISSMSSLTQ 180

Query: 181 LWLHGNQFSGVIPQNIGDLSIFV 203
           LWLHGNQF GVIPQNIGDLSIFV
Sbjct: 181 LWLHGNQFLGVIPQNIGDLSIFV 203

[Close]

BLAST of CsGy1G014885.1 vs. NCBI nr
Match: XP_038877227.1 (receptor-like kinase TMK3 [Benincasa hispida])

HSP 1 Score: 308 bits (790), Expect = 1.76e-95
Identity = 164/264 (62.12%), Postives = 175/264 (66.29%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           MVDD+LGLCISLILL LSTVC C +DINDVKILNDFREGLEN ELLKWPDNGDDPCGIPP
Sbjct: 1   MVDDQLGLCISLILLSLSTVCLCATDINDVKILNDFREGLENQELLKWPDNGDDPCGIPP 60

Query: 61  WPHVYCAGDRGPCLRILTSSLSSP------------------------------------ 120
           WPHVYCAGDR   +++    L  P                                    
Sbjct: 61  WPHVYCAGDRVSQIQVQGLGLKGPLPSNFNQLSKLSNLGLQKNKFNGALPSFSGLSELEF 120

Query: 121 -----------------------IWVFEYNPFNAAV-----DELAKSVQLTNLSLVQSNL 180
                                  +   +YNPFNA V     DELAKSV+LTNLSLVQSNL
Sbjct: 121 AYLDFNEFDTIPSDFFDGLSSIRVLALDYNPFNATVGWSLPDELAKSVELTNLSLVQSNL 180

Query: 181 AGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDAISSMS 200
           AGPLPEFLGTL SLT LKLSYNRLTG IPKSFGQ  MQILWLNDQD GMTGPID I SM+
Sbjct: 181 AGPLPEFLGTLPSLTALKLSYNRLTGPIPKSFGQSLMQILWLNDQDTGMTGPIDVIPSMT 240

[Close]

BLAST of CsGy1G014885.1 vs. NCBI nr
Match: XP_022142500.1 (receptor-like kinase TMK3 [Momordica charantia])

HSP 1 Score: 295 bits (754), Expect = 3.01e-90
Identity = 156/264 (59.09%), Postives = 171/264 (64.77%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           MV+++  LC SL+LLCLS+VCFC +D NDVKILNDFREGLENPELLKWP NGDDPCG PP
Sbjct: 1   MVNEEQRLCFSLVLLCLSSVCFCATDPNDVKILNDFREGLENPELLKWPVNGDDPCGTPP 60

Query: 61  WPHVYCAGDRGPCLRILTSSLSSP------------------------------------ 120
           WPHVYCAGDR   +++    L  P                                    
Sbjct: 61  WPHVYCAGDRVSQIQVQGLGLKGPLPQNFNQLSKLSNLGLQKNKFNGALPSFSGLSELEF 120

Query: 121 -----------------------IWVFEYNPFNAAV-----DELAKSVQLTNLSLVQSNL 180
                                  +   +YNPFNA V     DELA+SVQLTNLSLVQSNL
Sbjct: 121 AYLDFNEFDTIPSDFFDGLSSVRVLALDYNPFNATVGWSLPDELARSVQLTNLSLVQSNL 180

Query: 181 AGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDAISSMS 200
           AGPLPEFLGTL SLT LKLSYNRL+G IPKSFGQ  MQILWLNDQD GMTGPID I SM+
Sbjct: 181 AGPLPEFLGTLPSLTALKLSYNRLSGTIPKSFGQSLMQILWLNDQDTGMTGPIDVIPSMT 240

[Close]

BLAST of CsGy1G014885.1 vs. NCBI nr
Match: XP_022967055.1 (receptor-like kinase TMK3 [Cucurbita maxima])

HSP 1 Score: 290 bits (743), Expect = 1.08e-88
Identity = 152/264 (57.58%), Postives = 168/264 (63.64%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           M+D  LGLCISL+LLC STVCFC +D+NDVKILND R GLENPELLKWPDNGDDPCGIPP
Sbjct: 3   MMDYNLGLCISLVLLCTSTVCFCATDLNDVKILNDLRMGLENPELLKWPDNGDDPCGIPP 62

Query: 61  WPHVYCAGDRGPCLRILTSSLSSP------------------------------------ 120
           WPHVYCAGDR   +++    L  P                                    
Sbjct: 63  WPHVYCAGDRVSQIQVQGLGLKGPLPQNLNQLSKLSNLGLQKNKFNGALPSFSGLSELEF 122

Query: 121 -----------------------IWVFEYNPFNAAV-----DELAKSVQLTNLSLVQSNL 180
                                  +   +YNPFNA       DELAKSVQLTNLSLV SNL
Sbjct: 123 AYLDFNEFDTIPLDFFNGLTNIRVLALDYNPFNATAGWSLPDELAKSVQLTNLSLVHSNL 182

Query: 181 AGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDAISSMS 200
            GPLPEFLGTL SLT LKLSYNRLTG IP+SFGQ  MQILWLNDQD GMTG ID +  M+
Sbjct: 183 VGPLPEFLGTLPSLTALKLSYNRLTGPIPESFGQSLMQILWLNDQDTGMTGSIDVVPLMT 242

[Close]

BLAST of CsGy1G014885.1 vs. NCBI nr
Match: XP_023520709.1 (receptor-like kinase TMK3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 289 bits (740), Expect = 2.84e-88
Identity = 150/264 (56.82%), Postives = 171/264 (64.77%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           MVD+KLGLCISL LLCLS+VC   +D+NDVKILNDF++GL+NPELL+WPDNGDDPCG+PP
Sbjct: 1   MVDEKLGLCISLFLLCLSSVCLYATDVNDVKILNDFKKGLDNPELLEWPDNGDDPCGVPP 60

Query: 61  WPHVYCAGDRGPCLRILTSSLSSPI----------------------------------- 120
           WPHVYC+GDR   +++    L  P+                                   
Sbjct: 61  WPHVYCSGDRVSQIQVQGLGLKGPLPPNFNHLSKLSNLGLQKNKFNGALPSFSGLSELEF 120

Query: 121 ------------------------WVFEYNPFNAAV-----DELAKSVQLTNLSLVQSNL 180
                                      +YNP NA       DELAKSVQLTNLSL+QSNL
Sbjct: 121 AFLNDNEFDTIPSDFFDGLSSIRELALDYNPLNATSGWTLPDELAKSVQLTNLSLIQSNL 180

Query: 181 AGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDAISSMS 200
           AGPLPEFLGTL SL+ LKLSYNRLTG IPKSFGQ  MQILWLN QD GM GP+D I SM+
Sbjct: 181 AGPLPEFLGTLPSLSALKLSYNRLTGPIPKSFGQSLMQILWLNGQDTGMIGPLDVIPSMT 240

[Close]

BLAST of CsGy1G014885.1 vs. ExPASy TrEMBL
Match: A0A0A0LST6 (LRRNT_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G169940 PE=4 SV=1)

HSP 1 Score: 416 bits (1070), Expect = 3.23e-147
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP
Sbjct: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60

Query: 61  WPHVYCAGDRGPCLRILTSSLSSPIWVFEYNPFNAAVDELAKSVQLTNLSLVQSNLAGPL 120
           WPHVYCAGDRGPCLRILTSSLSSPIWVFEYNPFNAAVDELAKSVQLTNLSLVQSNLAGPL
Sbjct: 61  WPHVYCAGDRGPCLRILTSSLSSPIWVFEYNPFNAAVDELAKSVQLTNLSLVQSNLAGPL 120

Query: 121 PEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDAISSMSSLTQ 180
           PEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPID ISSMSSLTQ
Sbjct: 121 PEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDVISSMSSLTQ 180

Query: 181 LWLHGNQFSGVIPQNIGDLSIFV 203
           LWLHGNQF GVIPQNIGDLSIFV
Sbjct: 181 LWLHGNQFLGVIPQNIGDLSIFV 203

[Close]

BLAST of CsGy1G014885.1 vs. ExPASy TrEMBL
Match: A0A6J1CL40 (receptor-like kinase TMK3 OS=Momordica charantia OX=3673 GN=LOC111012604 PE=3 SV=1)

HSP 1 Score: 295 bits (754), Expect = 1.46e-90
Identity = 156/264 (59.09%), Postives = 171/264 (64.77%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           MV+++  LC SL+LLCLS+VCFC +D NDVKILNDFREGLENPELLKWP NGDDPCG PP
Sbjct: 1   MVNEEQRLCFSLVLLCLSSVCFCATDPNDVKILNDFREGLENPELLKWPVNGDDPCGTPP 60

Query: 61  WPHVYCAGDRGPCLRILTSSLSSP------------------------------------ 120
           WPHVYCAGDR   +++    L  P                                    
Sbjct: 61  WPHVYCAGDRVSQIQVQGLGLKGPLPQNFNQLSKLSNLGLQKNKFNGALPSFSGLSELEF 120

Query: 121 -----------------------IWVFEYNPFNAAV-----DELAKSVQLTNLSLVQSNL 180
                                  +   +YNPFNA V     DELA+SVQLTNLSLVQSNL
Sbjct: 121 AYLDFNEFDTIPSDFFDGLSSVRVLALDYNPFNATVGWSLPDELARSVQLTNLSLVQSNL 180

Query: 181 AGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDAISSMS 200
           AGPLPEFLGTL SLT LKLSYNRL+G IPKSFGQ  MQILWLNDQD GMTGPID I SM+
Sbjct: 181 AGPLPEFLGTLPSLTALKLSYNRLSGTIPKSFGQSLMQILWLNDQDTGMTGPIDVIPSMT 240

[Close]

BLAST of CsGy1G014885.1 vs. ExPASy TrEMBL
Match: A0A6J1HTA6 (receptor-like kinase TMK3 OS=Cucurbita maxima OX=3661 GN=LOC111466570 PE=3 SV=1)

HSP 1 Score: 290 bits (743), Expect = 5.22e-89
Identity = 152/264 (57.58%), Postives = 168/264 (63.64%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           M+D  LGLCISL+LLC STVCFC +D+NDVKILND R GLENPELLKWPDNGDDPCGIPP
Sbjct: 3   MMDYNLGLCISLVLLCTSTVCFCATDLNDVKILNDLRMGLENPELLKWPDNGDDPCGIPP 62

Query: 61  WPHVYCAGDRGPCLRILTSSLSSP------------------------------------ 120
           WPHVYCAGDR   +++    L  P                                    
Sbjct: 63  WPHVYCAGDRVSQIQVQGLGLKGPLPQNLNQLSKLSNLGLQKNKFNGALPSFSGLSELEF 122

Query: 121 -----------------------IWVFEYNPFNAAV-----DELAKSVQLTNLSLVQSNL 180
                                  +   +YNPFNA       DELAKSVQLTNLSLV SNL
Sbjct: 123 AYLDFNEFDTIPLDFFNGLTNIRVLALDYNPFNATAGWSLPDELAKSVQLTNLSLVHSNL 182

Query: 181 AGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDAISSMS 200
            GPLPEFLGTL SLT LKLSYNRLTG IP+SFGQ  MQILWLNDQD GMTG ID +  M+
Sbjct: 183 VGPLPEFLGTLPSLTALKLSYNRLTGPIPESFGQSLMQILWLNDQDTGMTGSIDVVPLMT 242

[Close]

BLAST of CsGy1G014885.1 vs. ExPASy TrEMBL
Match: A0A6J1EP20 (receptor-like kinase TMK3 OS=Cucurbita moschata OX=3662 GN=LOC111434293 PE=3 SV=1)

HSP 1 Score: 286 bits (731), Expect = 2.75e-87
Identity = 148/264 (56.06%), Postives = 170/264 (64.39%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           MVD++LGLC SL LLCLS+VC   +D+NDVKILNDF++GL+NPELL+WPDNGDDPCG+PP
Sbjct: 1   MVDERLGLCFSLFLLCLSSVCLYATDVNDVKILNDFKKGLDNPELLEWPDNGDDPCGVPP 60

Query: 61  WPHVYCAGDRGPCLRILTSSLSSPI----------------------------------- 120
           WPHVYC+GDR   +++    L  P+                                   
Sbjct: 61  WPHVYCSGDRVSQIQVQGLGLKGPLPPNFNHLSKLSNLGLQKNKFNGALPSFSGLSELEF 120

Query: 121 ------------------------WVFEYNPFNAAV-----DELAKSVQLTNLSLVQSNL 180
                                      +YNP NA V     DELAKSVQLTNLSL+QSNL
Sbjct: 121 AFLNDNEFDTIPADFFDGLSSIRELALDYNPLNATVGWTLPDELAKSVQLTNLSLIQSNL 180

Query: 181 AGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDAISSMS 200
           AGPLPEFLGTL SL+ LKLSYNRLTG IPKSFGQ  MQILWLN QD GM G +D I SM+
Sbjct: 181 AGPLPEFLGTLPSLSALKLSYNRLTGPIPKSFGQSLMQILWLNGQDTGMIGSLDVIPSMT 240

[Close]

BLAST of CsGy1G014885.1 vs. ExPASy TrEMBL
Match: A0A6J1I7R7 (receptor-like kinase TMK3 OS=Cucurbita maxima OX=3661 GN=LOC111471634 PE=3 SV=1)

HSP 1 Score: 285 bits (728), Expect = 7.46e-87
Identity = 147/264 (55.68%), Postives = 170/264 (64.39%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           MVD+KLGLC SL LLCLS+VC   +D+NDVKILNDF++GL+NPELL+WP+NGDDPCG+PP
Sbjct: 1   MVDEKLGLCFSLFLLCLSSVCLYATDVNDVKILNDFKKGLDNPELLEWPENGDDPCGVPP 60

Query: 61  WPHVYCAGDRGPCLRILTSSLSSPI----------------------------------- 120
           WPHVYC+GDR   +++    L  P+                                   
Sbjct: 61  WPHVYCSGDRVSQIQVQGLGLKGPLPPNFNHLSKLSNLGLQKNMFNGALPSFSGLSELEF 120

Query: 121 ------------------------WVFEYNPFNAAV-----DELAKSVQLTNLSLVQSNL 180
                                      +YNP NA       D+LAKSVQLTNLSL+QSNL
Sbjct: 121 AFLNDNEFDTIPADFFDDLSSIRELALDYNPLNATSGWTLPDKLAKSVQLTNLSLIQSNL 180

Query: 181 AGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDAISSMS 200
           AGPLPEFLGTL SL+ LKLSYNRLTG IPKSFGQ  MQILWLN QD GM GP+D I SM+
Sbjct: 181 AGPLPEFLGTLPSLSALKLSYNRLTGPIPKSFGQSLMQILWLNGQDTGMIGPLDVIPSMT 240

[Close]

BLAST of CsGy1G014885.1 vs. TAIR 10
Match: AT3G23750.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 106.3 bits (264), Expect = 3.0e-23
Identity = 51/108 (47.22%), Postives = 73/108 (67.59%), Query Frame = 0


Query: 99  ELAKSVQLTNLSLVQSNLAGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWL 158
           EL  S  LT + L  +N+AG LP+   +L+SL  L+LSYN +TG +P S G+  +Q LW+
Sbjct: 153 ELVDSTSLTTIYLDNTNIAGVLPDIFDSLASLQNLRLSYNNITGVLPPSLGKSSIQNLWI 212

Query: 159 NDQDIGMTGPIDAISSMSSLTQLWLHGNQFSGVIP-----QNIGDLSI 202
           N+QD+GM+G I+ +SSM+SL+Q WLH N F G IP     +N+ DL +
Sbjct: 213 NNQDLGMSGTIEVLSSMTSLSQAWLHKNHFFGPIPDLSKSENLFDLQL 260

[Close]

BLAST of CsGy1G014885.1 vs. TAIR 10
Match: AT2G01820.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 83.2 bits (204), Expect = 2.7e-16
Identity = 50/119 (42.02%), Postives = 72/119 (60.50%), Query Frame = 0


Query: 89  EYNPFNAAV--DELAKSVQLTNLSLVQSNLAGPLPEFLG--TLSSLTTLKLSYNRLTGQI 148
           E NPF+  V  D + ++  L NL+L   ++ G +P+F G  +L SLT LKLS N L G++
Sbjct: 144 ENNPFDPWVIPDTVKEATSLQNLTLSNCSIIGKIPDFFGSQSLPSLTNLKLSQNGLEGEL 203

Query: 149 PKSFGQFFMQILWLNDQDIGMTGPIDAISSMSSLTQLWLHGNQFSGVIPQNIGDLSIFV 204
           P SF    +Q L+LN Q   + G I  + +M+SL ++ L GNQFSG IP   G +S+ V
Sbjct: 204 PMSFAGTSIQSLFLNGQK--LNGSISVLGNMTSLVEVSLQGNQFSGPIPDLSGLVSLRV 260

[Close]

BLAST of CsGy1G014885.1 vs. TAIR 10
Match: AT1G24650.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 76.3 bits (186), Expect = 3.3e-14
Identity = 47/118 (39.83%), Postives = 66/118 (55.93%), Query Frame = 0


Query: 91  NPFNAAV--DELAKSVQLTNLSLVQSNLAGPLPEFL---GTLSSLTTLKLSYNRLTGQIP 150
           NPF++ V    L  +  L + S V  NL+G +P++L      SSLTTLKLSYN L  + P
Sbjct: 141 NPFDSWVIPPSLENATSLVDFSAVNCNLSGKIPDYLFEGKDFSSLTTLKLSYNSLVCEFP 200

Query: 151 KSFGQFFMQILWLNDQD--IGMTGPIDAISSMSSLTQLWLHGNQFSGVIPQNIGDLSI 202
            +F    +Q+L LN Q     + G I  +  M+SLT + L GN FSG +P   G +S+
Sbjct: 201 MNFSDSRVQVLMLNGQKGREKLHGSISFLQKMTSLTNVTLQGNSFSGPLPDFSGLVSL 258

[Close]

BLAST of CsGy1G014885.1 vs. TAIR 10
Match: AT1G66150.1 (transmembrane kinase 1 )

HSP 1 Score: 75.9 bits (185), Expect = 4.3e-14
Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 91  NPFNA--AVDELAKSVQLTNLSLVQSNLAGPLPEFLG--TLSSLTTLKLSYNRLTGQIPK 150
           NPF +    + L  +  L N S   +N++G LP FLG      L+ L L++N L G++P 
Sbjct: 145 NPFKSWEIPESLRNASALQNFSANSANVSGSLPGFLGPDEFPGLSILHLAFNNLEGELPM 204

Query: 151 SFGQFFMQILWLNDQDIGMTGPIDAISSMSSLTQLWLHGNQFSGVIPQNIG 198
           S     +Q LWLN Q   +TG I  + +M+ L ++WLH N+FSG +P   G
Sbjct: 205 SLAGSQVQSLWLNGQK--LTGDITVLQNMTGLKEVWLHSNKFSGPLPDFSG 253

[Close]

BLAST of CsGy1G014885.1 vs. TAIR 10
Match: AT3G12145.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 73.2 bits (178), Expect = 2.8e-13
Identity = 58/206 (28.16%), Postives = 93/206 (45.15%), Query Frame = 0


Query: 6   LGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPPWPHVY 65
           L +  S++ + L +   CT   ND   L   ++ L NP LL   +   D C    W  V 
Sbjct: 7   LSIFFSILFITLPSSYSCTE--NDKNALLQIKKALGNPPLLSSWNPRTDCC--TGWTGVE 66

Query: 66  CAGDRGPCLRILTSSLSSPIWV------------FEYNPF--NAAVDELAKSVQLTNLSL 125
           C   R   L + +  +S  I              F Y P         + K   L  L L
Sbjct: 67  CTNRRVTGLSVTSGEVSGQISYQIGDLVDLRTLDFSYLPHLTGNIPRTITKLKNLNTLYL 126

Query: 126 VQSNLAGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQF-FMQILWLNDQDIGMTGPID 185
             ++L+GP+P+++  L SLT L LS+N+ TG IP S  Q   ++ + +ND  +  + P  
Sbjct: 127 KHTSLSGPIPDYISELKSLTFLDLSFNQFTGPIPGSLSQMPKLEAIQINDNKLTGSIPNS 186

Query: 186 AISSMSSLTQLWLHGNQFSGVIPQNI 197
             S + ++  L+L  N+ SG IP+++
Sbjct: 187 FGSFVGNVPNLYLSNNKLSGKIPESL 208

The following BLAST results are available for this feature:

BLAST of CsGy1G014885.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LK43	4.2e-22	47.22	Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1	[more]
Q9SIT1	3.8e-15	42.02	Receptor-like kinase TMK3 OS=Arabidopsis thaliana OX=3702 GN=TMK3 PE=1 SV=1	[more]
Q9FYK0	4.6e-13	39.83	Receptor-like kinase TMK2 OS=Arabidopsis thaliana OX=3702 GN=TMK2 PE=1 SV=1	[more]
P43298	6.0e-13	37.84	Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1	[more]
Q9LH52	3.9e-12	28.16	Leucine-rich repeat protein FLOR 1 OS=Arabidopsis thaliana OX=3702 GN=FLR1 PE=1 ...	[more]

BLAST of CsGy1G014885.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64970.1	6.67e-147	99.01	hypothetical protein Csa_022794 [Cucumis sativus]	[more]
XP_038877227.1	1.76e-95	62.12	receptor-like kinase TMK3 [Benincasa hispida]	[more]
XP_022142500.1	3.01e-90	59.09	receptor-like kinase TMK3 [Momordica charantia]	[more]
XP_022967055.1	1.08e-88	57.58	receptor-like kinase TMK3 [Cucurbita maxima]	[more]
XP_023520709.1	2.84e-88	56.82	receptor-like kinase TMK3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy1G014885.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LST6	3.23e-147	99.01	LRRNT_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G169940 PE=...	[more]
A0A6J1CL40	1.46e-90	59.09	receptor-like kinase TMK3 OS=Momordica charantia OX=3673 GN=LOC111012604 PE=3 SV...	[more]
A0A6J1HTA6	5.22e-89	57.58	receptor-like kinase TMK3 OS=Cucurbita maxima OX=3661 GN=LOC111466570 PE=3 SV=1	[more]
A0A6J1EP20	2.75e-87	56.06	receptor-like kinase TMK3 OS=Cucurbita moschata OX=3662 GN=LOC111434293 PE=3 SV=...	[more]
A0A6J1I7R7	7.46e-87	55.68	receptor-like kinase TMK3 OS=Cucurbita maxima OX=3661 GN=LOC111471634 PE=3 SV=1	[more]

BLAST of CsGy1G014885.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23750.1	3.0e-23	47.22	Leucine-rich repeat protein kinase family protein	[more]
AT2G01820.1	2.7e-16	42.02	Leucine-rich repeat protein kinase family protein	[more]
AT1G24650.1	3.3e-14	39.83	Leucine-rich repeat protein kinase family protein	[more]
AT1G66150.1	4.3e-14	37.84	transmembrane kinase 1	[more]
AT3G12145.1	2.8e-13	28.16	Leucine-rich repeat (LRR) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 23..202 e-value: 1.9E-25 score: 91.7
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	PFAM	PF08263	LRRNT_2	coord: 28..66 e-value: 3.2E-4 score: 21.0
None	No IPR available	PANTHER	PTHR47986	OSJNBA0070M12.3 PROTEIN	coord: 88..200 coord: 8..74
None	No IPR available	PANTHER	PTHR47986:SF3	OSJNBA0070M12.3 PROTEIN	coord: 88..200 coord: 8..74
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 54..199

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy1G014885	CsGy1G014885	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G014885.1.exon1	CsGy1G014885.1.exon1	exon
CsGy1G014885.1.exon2	CsGy1G014885.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy1G014885.1	cds.CsGy1G014885.1	CDS
cds.CsGy1G014885.1	cds.CsGy1G014885.1_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy1G014885.1	CsGy1G014885.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016301	kinase activity