Cp4.1LG20g08720.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g08720.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Unknown protein
Location	Cp4.1LG20: 7200832 .. 7201233 (+)
Sequence length	402
RNA-Seq Expression	Cp4.1LG20g08720.1
Synteny	Cp4.1LG20g08720.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCGTCTGCATATCCGAATGCATCAACGACACCTGTATTATCCCCGCCGGCCGGCCGACGTATTTCAGCTTGCAGCGGTGGCCGGAGGAGGAGGATGGGTCTGTAGAGCCCCGTCGGCCACGGCTGAGAGCGGCAGACGGGATCTCTCGCCGGCAAATGTACTTGAGGAGCTACACCTTCTCAAGGGAGGACACCGAAGTCCATGAGAGTACAGCGCAGACCTGCCTTGGGAAGCTCAAGCGGCGACGGAGGCCGGCAGAGATCCGCGGCGGCGGAAGGAGGAGCCGCTGTTTCGCCATCGTGAGGGCCGCCGCTGCGAAGGCTTCTTCCGGCGCCTTGCTCTCCATGTTCCGGCGGTTGCTTTCTTGCGTGGCGAAAGTTGACGGTCGTAAGTGA

mRNA sequence

ATGGCCTCCGTCTGCATATCCGAATGCATCAACGACACCTGTATTATCCCCGCCGGCCGGCCGACGTATTTCAGCTTGCAGCGGTGGCCGGAGGAGGAGGATGGGTCTGTAGAGCCCCGTCGGCCACGGCTGAGAGCGGCAGACGGGATCTCTCGCCGGCAAATGTACTTGAGGAGCTACACCTTCTCAAGGGAGGACACCGAAGTCCATGAGAGTACAGCGCAGACCTGCCTTGGGAAGCTCAAGCGGCGACGGAGGCCGGCAGAGATCCGCGGCGGCGGAAGGAGGAGCCGCTGTTTCGCCATCGTGAGGGCCGCCGCTGCGAAGGCTTCTTCCGGCGCCTTGCTCTCCATGTTCCGGCGGTTGCTTTCTTGCGTGGCGAAAGTTGACGGTCGTAAGTGA

Coding sequence (CDS)

ATGGCCTCCGTCTGCATATCCGAATGCATCAACGACACCTGTATTATCCCCGCCGGCCGGCCGACGTATTTCAGCTTGCAGCGGTGGCCGGAGGAGGAGGATGGGTCTGTAGAGCCCCGTCGGCCACGGCTGAGAGCGGCAGACGGGATCTCTCGCCGGCAAATGTACTTGAGGAGCTACACCTTCTCAAGGGAGGACACCGAAGTCCATGAGAGTACAGCGCAGACCTGCCTTGGGAAGCTCAAGCGGCGACGGAGGCCGGCAGAGATCCGCGGCGGCGGAAGGAGGAGCCGCTGTTTCGCCATCGTGAGGGCCGCCGCTGCGAAGGCTTCTTCCGGCGCCTTGCTCTCCATGTTCCGGCGGTTGCTTTCTTGCGTGGCGAAAGTTGACGGTCGTAAGTGA

Protein sequence

MASVCISECINDTCIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSYTFSREDTEVHESTAQTCLGKLKRRRRPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMFRRLLSCVAKVDGRK

Homology

[Close]

BLAST of Cp4.1LG20g08720.1 vs. NCBI nr
Match: XP_023519361.1 (uncharacterized protein LOC111782795 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262 bits (669), Expect = 4.54e-88
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MASVCISECINDTCIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY 60
           MASVCISECINDTCIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY
Sbjct: 1   MASVCISECINDTCIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY 60

Query: 61  TFSREDTEVHESTAQTCLGKLKRRRRPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMFR 120
           TFSREDTEVHESTAQTCLGKLKRRRRPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMFR
Sbjct: 61  TFSREDTEVHESTAQTCLGKLKRRRRPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMFR 120

Query: 121 RLLSCVAKVDGRK 133
           RLLSCVAKVDGRK
Sbjct: 121 RLLSCVAKVDGRK 133

[Close]

BLAST of Cp4.1LG20g08720.1 vs. NCBI nr
Match: XP_022970388.1 (uncharacterized protein LOC111469389 [Cucurbita maxima])

HSP 1 Score: 258 bits (659), Expect = 1.52e-86
Identity = 131/133 (98.50%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 1   MASVCISECINDTCIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY 60
           MASVCISECIND CIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY
Sbjct: 1   MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY 60

Query: 61  TFSREDTEVHESTAQTCLGKLKRRRRPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMFR 120
           TFSREDTEVHESTAQTCLGKLKRRRRPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMFR
Sbjct: 61  TFSREDTEVHESTAQTCLGKLKRRRRPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMFR 120

Query: 121 RLLSCVAKVDGRK 133
           RLL CVAKVDGRK
Sbjct: 121 RLLCCVAKVDGRK 133

[Close]

BLAST of Cp4.1LG20g08720.1 vs. NCBI nr
Match: XP_022964754.1 (uncharacterized protein LOC111464745 [Cucurbita moschata])

HSP 1 Score: 251 bits (641), Expect = 8.46e-84
Identity = 128/133 (96.24%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 1   MASVCISECINDTCIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY 60
           MASVCISECIND CIIPAGRPTYFSLQRWPEEEDGSVEPRRPR+RAADGISRRQMYLRSY
Sbjct: 1   MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSY 60

Query: 61  TFSREDTEVHESTAQTCLGKLKRRRRPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMFR 120
           TF REDT VHESTAQTCLGKLK RRRPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMFR
Sbjct: 61  TFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMFR 120

Query: 121 RLLSCVAKVDGRK 133
           RLLSCVAKVDGRK
Sbjct: 121 RLLSCVAKVDGRK 133

[Close]

BLAST of Cp4.1LG20g08720.1 vs. NCBI nr
Match: KAG6583454.1 (hypothetical protein SDJN03_19386, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019211.1 hypothetical protein SDJN02_18169, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 245 bits (626), Expect = 1.64e-81
Identity = 126/133 (94.74%), Postives = 127/133 (95.49%), Query Frame = 0


Query: 1   MASVCISECINDTCIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY 60
           MAS CISECIND CIIPAGRPTYFSLQRWPEEEDGSVEPRRPR+RAADGISRRQMYLRSY
Sbjct: 1   MASGCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSY 60

Query: 61  TFSREDTEVHESTAQTCLGKLKRRRRPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMFR 120
           TF REDT VHESTAQTCLGKLK RRRPAEIRGGGRRS CFAIVRAAAAKASSGALLSMFR
Sbjct: 61  TFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSCCFAIVRAAAAKASSGALLSMFR 120

Query: 121 RLLSCVAKVDGRK 133
           RLLSCVAKVDGRK
Sbjct: 121 RLLSCVAKVDGRK 133

[Close]

BLAST of Cp4.1LG20g08720.1 vs. NCBI nr
Match: XP_008457578.1 (PREDICTED: uncharacterized protein LOC103497245 [Cucumis melo] >KAA0033875.1 uncharacterized protein E6C27_scaffold43059G00600 [Cucumis melo var. makuwa] >TYK01259.1 uncharacterized protein E5676_scaffold49G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (475), Expect = 1.88e-58
Identity = 97/133 (72.93%), Postives = 111/133 (83.46%), Query Frame = 0


Query: 1   MASVCISECINDTCIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY 60
           MASVCISEC+++ CI+ A +PTY +LQRW EEE  S E RRPR RAA+GISRRQMYLRSY
Sbjct: 1   MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSY 60

Query: 61  TFSREDTEVHESTAQTCLGKLKRRR-RPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMF 120
           TFSREDT V E+T Q C GK++RRR RPA IRG  RRSRCFA+V+AAA +ASSGAL+ MF
Sbjct: 61  TFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRCFAMVKAAATQASSGALVLMF 120

Query: 121 RRLLSCVAKVDGR 132
           RRLL CVAKVDGR
Sbjct: 121 RRLLCCVAKVDGR 133

[Close]

BLAST of Cp4.1LG20g08720.1 vs. ExPASy TrEMBL
Match: A0A6J1I3Q2 (uncharacterized protein LOC111469389 OS=Cucurbita maxima OX=3661 GN=LOC111469389 PE=4 SV=1)

HSP 1 Score: 258 bits (659), Expect = 7.36e-87
Identity = 131/133 (98.50%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 1   MASVCISECINDTCIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY 60
           MASVCISECIND CIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY
Sbjct: 1   MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY 60

Query: 61  TFSREDTEVHESTAQTCLGKLKRRRRPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMFR 120
           TFSREDTEVHESTAQTCLGKLKRRRRPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMFR
Sbjct: 61  TFSREDTEVHESTAQTCLGKLKRRRRPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMFR 120

Query: 121 RLLSCVAKVDGRK 133
           RLL CVAKVDGRK
Sbjct: 121 RLLCCVAKVDGRK 133

[Close]

BLAST of Cp4.1LG20g08720.1 vs. ExPASy TrEMBL
Match: A0A6J1HP59 (uncharacterized protein LOC111464745 OS=Cucurbita moschata OX=3662 GN=LOC111464745 PE=4 SV=1)

HSP 1 Score: 251 bits (641), Expect = 4.10e-84
Identity = 128/133 (96.24%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 1   MASVCISECINDTCIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY 60
           MASVCISECIND CIIPAGRPTYFSLQRWPEEEDGSVEPRRPR+RAADGISRRQMYLRSY
Sbjct: 1   MASVCISECINDACIIPAGRPTYFSLQRWPEEEDGSVEPRRPRVRAADGISRRQMYLRSY 60

Query: 61  TFSREDTEVHESTAQTCLGKLKRRRRPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMFR 120
           TF REDT VHESTAQTCLGKLK RRRPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMFR
Sbjct: 61  TFCREDTVVHESTAQTCLGKLKWRRRPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMFR 120

Query: 121 RLLSCVAKVDGRK 133
           RLLSCVAKVDGRK
Sbjct: 121 RLLSCVAKVDGRK 133

[Close]

BLAST of Cp4.1LG20g08720.1 vs. ExPASy TrEMBL
Match: A0A5A7SXG3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00460 PE=4 SV=1)

HSP 1 Score: 187 bits (475), Expect = 9.08e-59
Identity = 97/133 (72.93%), Postives = 111/133 (83.46%), Query Frame = 0


Query: 1   MASVCISECINDTCIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY 60
           MASVCISEC+++ CI+ A +PTY +LQRW EEE  S E RRPR RAA+GISRRQMYLRSY
Sbjct: 1   MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSY 60

Query: 61  TFSREDTEVHESTAQTCLGKLKRRR-RPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMF 120
           TFSREDT V E+T Q C GK++RRR RPA IRG  RRSRCFA+V+AAA +ASSGAL+ MF
Sbjct: 61  TFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRCFAMVKAAATQASSGALVLMF 120

Query: 121 RRLLSCVAKVDGR 132
           RRLL CVAKVDGR
Sbjct: 121 RRLLCCVAKVDGR 133

[Close]

BLAST of Cp4.1LG20g08720.1 vs. ExPASy TrEMBL
Match: A0A1S3C748 (uncharacterized protein LOC103497245 OS=Cucumis melo OX=3656 GN=LOC103497245 PE=4 SV=1)

HSP 1 Score: 187 bits (475), Expect = 9.08e-59
Identity = 97/133 (72.93%), Postives = 111/133 (83.46%), Query Frame = 0


Query: 1   MASVCISECINDTCIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY 60
           MASVCISEC+++ CI+ A +PTY +LQRW EEE  S E RRPR RAA+GISRRQMYLRSY
Sbjct: 1   MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSY 60

Query: 61  TFSREDTEVHESTAQTCLGKLKRRR-RPAEIRGGGRRSRCFAIVRAAAAKASSGALLSMF 120
           TFSREDT V E+T Q C GK++RRR RPA IRG  RRSRCFA+V+AAA +ASSGAL+ MF
Sbjct: 61  TFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRCFAMVKAAATQASSGALVLMF 120

Query: 121 RRLLSCVAKVDGR 132
           RRLL CVAKVDGR
Sbjct: 121 RRLLCCVAKVDGR 133

[Close]

BLAST of Cp4.1LG20g08720.1 vs. ExPASy TrEMBL
Match: A0A0A0LXY3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G497810 PE=4 SV=1)

HSP 1 Score: 187 bits (475), Expect = 9.38e-59
Identity = 97/134 (72.39%), Postives = 111/134 (82.84%), Query Frame = 0


Query: 1   MASVCISECINDTCIIPAGRPTYFSLQRWPEEEDGSVEPRRPRLRAADGISRRQMYLRSY 60
           MASVCISEC+++ CI+ A RPTY +LQRW EEE  S E RRPR RAADGISRRQMYLRSY
Sbjct: 1   MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSY 60

Query: 61  TFSREDTEVHESTAQTCLGKLKRRRR-PAEIRGGGRRSRCFAIVRAAAAKASSGALLSMF 120
           TFSRED  V E+T Q C GK++RRRR PA IRGG RRSRC A+V+AAA++ SSGALL +F
Sbjct: 61  TFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRCLAMVKAAASQVSSGALLFLF 120

Query: 121 RRLLSCVAKVDGRK 133
           RRLL CVAKVDGR+
Sbjct: 121 RRLLCCVAKVDGRR 134

[Close]

BLAST of Cp4.1LG20g08720.1 vs. TAIR 10
Match: AT5G02640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15
Identity = 62/156 (39.74%), Postives = 76/156 (48.72%), Query Frame = 0


Query: 1   MASVCISECINDT----CIIPAGRPTYFSLQRWPEEEDGSVEPRR-----PRLRAADGIS 60
           M SVCIS CIND       +   R +Y +L +WPE +   V   R     P  R  D IS
Sbjct: 1   MNSVCISSCINDAHDPRVPVRPVRASYVNLYKWPESDAEFVRSVRRGGGLPAARVVDSIS 60

Query: 61  RRQMYLRSYTFSREDTE-----VHESTAQTCLGKLK----RRRRPAEIRG--------GG 120
            RQMYLRSYTFSRED E     V   T  +CLG++K     RR+  E  G          
Sbjct: 61  CRQMYLRSYTFSREDDESKSEKVSSGTQTSCLGRVKGTASSRRKSKEENGIIIVESTKPR 120

Query: 121 RRSRCFAIVRAAAAKASSGALLSMFRRLLSCVAKVD 131
           RR     + R    + +   +L +FRRLLSC A VD
Sbjct: 121 RRGEKRRVSRKNKQEQACSVILRIFRRLLSCAATVD 156

[Close]

BLAST of Cp4.1LG20g08720.1 vs. TAIR 10
Match: AT3G46300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46310.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 5.6e-07
Identity = 43/136 (31.62%), Postives = 61/136 (44.85%), Query Frame = 0


Query: 1   MASVCISECIN----DTCIIPAGRPTYFSLQRWPEEEDGSV-----EPRRPRLRAADGIS 60
           MAS CI +C+N      C+ P    TY +L +WP  E   V     +  + R    D IS
Sbjct: 1   MASKCIDDCVNIKRDSICVRPV--MTYANLYKWPMAEAEFVRSINHDGSQHRTTVVDSIS 60

Query: 61  RRQMYLRSYTFSREDTEVHESTAQTCLGKLKRRRRPAEIRGGGRRSRCFAIVRAAAAKAS 120
            RQMYLRSYTFS E+ E  +          +R  +     GGGR+      +R     + 
Sbjct: 61  CRQMYLRSYTFSTEENE-EDGDGGDGEAVTRRHNQSCFRGGGGRKKAAKNAMRNNKTWSC 120

Query: 121 SGALLSMFRRLLSCVA 128
              +  + R+ LSC +
Sbjct: 121 RTFVFRLVRKCLSCAS 133

[Close]

BLAST of Cp4.1LG20g08720.1 vs. TAIR 10
Match: AT3G46310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 35 Blast hits to 35 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 2.1e-06
Identity = 35/79 (44.30%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 1  MASVCISECI----NDTCIIPAGRPTYFSLQRWPEEE---------DGSVEPRRPRLRAA 60
          MAS CI +C+    N  C+ P GR T+  + +WP  E         DGS  PR  R  A 
Sbjct: 1  MASKCIGDCVNIKNNAICVRP-GR-THAKIHKWPMAEVEFVQSISQDGS--PR--RTTAV 60

Query: 61 DGISRRQMYLRSYTFSRED 67
          + +S RQMYLRSYTFSR++
Sbjct: 61 ESLSCRQMYLRSYTFSRKE 73

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g08720.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG20g08720.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519361.1	4.54e-88	100.00	uncharacterized protein LOC111782795 [Cucurbita pepo subsp. pepo]	[more]
XP_022970388.1	1.52e-86	98.50	uncharacterized protein LOC111469389 [Cucurbita maxima]	[more]
XP_022964754.1	8.46e-84	96.24	uncharacterized protein LOC111464745 [Cucurbita moschata]	[more]
KAG6583454.1	1.64e-81	94.74	hypothetical protein SDJN03_19386, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008457578.1	1.88e-58	72.93	PREDICTED: uncharacterized protein LOC103497245 [Cucumis melo] >KAA0033875.1 unc...	[more]

BLAST of Cp4.1LG20g08720.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I3Q2	7.36e-87	98.50	uncharacterized protein LOC111469389 OS=Cucurbita maxima OX=3661 GN=LOC111469389...	[more]
A0A6J1HP59	4.10e-84	96.24	uncharacterized protein LOC111464745 OS=Cucurbita moschata OX=3662 GN=LOC1114647...	[more]
A0A5A7SXG3	9.08e-59	72.93	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C748	9.08e-59	72.93	uncharacterized protein LOC103497245 OS=Cucumis melo OX=3656 GN=LOC103497245 PE=...	[more]
A0A0A0LXY3	9.38e-59	72.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G497810 PE=4 SV=1	[more]

BLAST of Cp4.1LG20g08720.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02640.1	1.1e-15	39.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G46300.1	5.6e-07	31.62	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G46310.1	2.1e-06	44.30	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35304:SF2	SUBFAMILY NOT NAMED	coord: 1..131
None	No IPR available	PANTHER	PTHR35304	OS05G0120300 PROTEIN-RELATED	coord: 1..131

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG20g08720	Cp4.1LG20g08720	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g08720.1:exon:001	Cp4.1LG20g08720.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g08720.1:cds:001	Cp4.1LG20g08720.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g08720.1	Cp4.1LG20g08720.1-protein	polypeptide