Cp4.1LG20g07950.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g07950.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-H2 finger protein ATL63-like
Location	Cp4.1LG20: 7887575 .. 7888366 (+)
Sequence length	792
RNA-Seq Expression	Cp4.1LG20g07950.1
Synteny	Cp4.1LG20g07950.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTCAATTCCACTTCGCTGATCGGTTTCGCTCAGAGCGTATTCTCCTACAACAGCAACATCATGCTCGCTGCTCTCATTTCTCTTCTCCTCGTCGTCCTCTTCGTCCTTCTCCTCCACGCCTACGCCAATTGCTTCTTCCCTCAGCCTCGCCACCGCCGGACTTCTGTCACTGTCTCCTACGTCCTCGGTCCGCCTCGCCTCTCGCGTTTCGATTCGGTTCCATTCGATTCAGGCGCCGCTCCGTCGAAAGGCCTCGATCCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTACGAATCCGAGGAGAAGAAGTGCGCGGCGGTGATGGAGTGCGTGATTTGCCTCAGCGAATTTGAGGAACGAGAGCTTGGACGACGCTTGCCGAAATGTAGCCATGGATTTCACCTCGAGTGTATCGATATGTGGCTGAATTCTCACGCGAGTTGTCCTGTTTGTAGAGCGCCGGTGCTTGGCGACGCCACGGATTGTTCCGATGCGGTAGAATCCGGCCGGTTGAGTGGCGAGAGGGAAATCGGAGGAGAGATTGTAACGGAGGAGCGGCGCAATTGTGAGATTCAGAGAAACGAGGGGCAAAACGGTCAGTTTCATTCTGATTCTTCCTCTTCTTCCTCTTCTTCTTCTTCTTCGTCTTCTTTATCTTCGTCGAGTTCTTCGACTGATCAGCCATTGATGTCGCTTGGAGCGTCTTTAAAACGAATGTTGAGCAGAAACAGATCGGACGGGAGGATTTTCCCCTCCTCCGATGGCGACGAATTGGATGTTTGA

mRNA sequence

ATGGCGTTCAATTCCACTTCGCTGATCGGTTTCGCTCAGAGCGTATTCTCCTACAACAGCAACATCATGCTCGCTGCTCTCATTTCTCTTCTCCTCGTCGTCCTCTTCGTCCTTCTCCTCCACGCCTACGCCAATTGCTTCTTCCCTCAGCCTCGCCACCGCCGGACTTCTGTCACTGTCTCCTACGTCCTCGGTCCGCCTCGCCTCTCGCGTTTCGATTCGGTTCCATTCGATTCAGGCGCCGCTCCGTCGAAAGGCCTCGATCCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTACGAATCCGAGGAGAAGAAGTGCGCGGCGGTGATGGAGTGCGTGATTTGCCTCAGCGAATTTGAGGAACGAGAGCTTGGACGACGCTTGCCGAAATGTAGCCATGGATTTCACCTCGAGTGTATCGATATGTGGCTGAATTCTCACGCGAGTTGTCCTGTTTGTAGAGCGCCGGTGCTTGGCGACGCCACGGATTGTTCCGATGCGGTAGAATCCGGCCGGTTGAGTGGCGAGAGGGAAATCGGAGGAGAGATTGTAACGGAGGAGCGGCGCAATTGTGAGATTCAGAGAAACGAGGGGCAAAACGGTCAGTTTCATTCTGATTCTTCCTCTTCTTCCTCTTCTTCTTCTTCTTCGTCTTCTTTATCTTCGTCGAGTTCTTCGACTGATCAGCCATTGATGTCGCTTGGAGCGTCTTTAAAACGAATGTTGAGCAGAAACAGATCGGACGGGAGGATTTTCCCCTCCTCCGATGGCGACGAATTGGATGTTTGA

Coding sequence (CDS)

ATGGCGTTCAATTCCACTTCGCTGATCGGTTTCGCTCAGAGCGTATTCTCCTACAACAGCAACATCATGCTCGCTGCTCTCATTTCTCTTCTCCTCGTCGTCCTCTTCGTCCTTCTCCTCCACGCCTACGCCAATTGCTTCTTCCCTCAGCCTCGCCACCGCCGGACTTCTGTCACTGTCTCCTACGTCCTCGGTCCGCCTCGCCTCTCGCGTTTCGATTCGGTTCCATTCGATTCAGGCGCCGCTCCGTCGAAAGGCCTCGATCCGTCTGTAATCTCTGCGATTCCTCTGTTCGTTTACGAATCCGAGGAGAAGAAGTGCGCGGCGGTGATGGAGTGCGTGATTTGCCTCAGCGAATTTGAGGAACGAGAGCTTGGACGACGCTTGCCGAAATGTAGCCATGGATTTCACCTCGAGTGTATCGATATGTGGCTGAATTCTCACGCGAGTTGTCCTGTTTGTAGAGCGCCGGTGCTTGGCGACGCCACGGATTGTTCCGATGCGGTAGAATCCGGCCGGTTGAGTGGCGAGAGGGAAATCGGAGGAGAGATTGTAACGGAGGAGCGGCGCAATTGTGAGATTCAGAGAAACGAGGGGCAAAACGGTCAGTTTCATTCTGATTCTTCCTCTTCTTCCTCTTCTTCTTCTTCTTCGTCTTCTTTATCTTCGTCGAGTTCTTCGACTGATCAGCCATTGATGTCGCTTGGAGCGTCTTTAAAACGAATGTTGAGCAGAAACAGATCGGACGGGAGGATTTTCCCCTCCTCCGATGGCGACGAATTGGATGTTTGA

Protein sequence

MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREIGGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQPLMSLGASLKRMLSRNRSDGRIFPSSDGDELDV

Homology

[Close]

BLAST of Cp4.1LG20g07950.1 vs. ExPASy Swiss-Prot
Match: Q9LUZ9 (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.3e-31
Identity = 110/283 (38.87%), Postives = 153/283 (54.06%), Query Frame = 0


Query: 6   TSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP---------------Q 65
           +SL  F + + SYNSN++LAAL+ LLLVVLFVLLLH YA  F+                +
Sbjct: 13  SSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRR 72

Query: 66  PRHRRTSVTVSYVLGPPRLSRFD---SVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKC 125
            R+RR +VT + ++    L  FD   S P  +     KGLD SVIS+IPLFVYE  E++ 
Sbjct: 73  RRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEE 132

Query: 126 AAVMECVICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATD--- 185
               ECVICL  +E  + GR+L  C HGFH+ECIDMWL+SH++CP+CR+PVL   +D   
Sbjct: 133 DEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEEN 192

Query: 186 ---CSDAVE---------------SGRLSGEREIG------------GEIVTEERRNCEI 231
                +AVE                  +SG+R +             G+   EE    E+
Sbjct: 193 LKLAVNAVEEEAEVRLQMSPAGENESNVSGDRRVSLSLSVMEDDLKTGDDDGEEEVRIEV 252

[Close]

BLAST of Cp4.1LG20g07950.1 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.7e-21
Identity = 60/156 (38.46%), Postives = 85/156 (54.49%), Query Frame = 0


Query: 9   IGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPR 68
           +    S ++ N  IML+++I L + V+ +L  H+YA   F +   R      S+      
Sbjct: 15  VSHTSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSH------ 74

Query: 69  LSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYES------EEKKCAAVMECVICLSEFEE 128
           L    + P D      + LD +V+  IP+FVY S      EEK+     EC +CLSEFEE
Sbjct: 75  LRTLSASPRD------QALDQAVLDKIPIFVYSSKNPPPPEEKE-----ECSVCLSEFEE 134

Query: 129 RELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPV 159
            + GR LPKC H FH++CID W  S ++CP+CRAPV
Sbjct: 135 EDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of Cp4.1LG20g07950.1 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 9.5e-19
Identity = 80/260 (30.77%), Postives = 121/260 (46.54%), Query Frame = 0


Query: 16  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR--------RTSVTVSYVLGPP 75
           ++ +  IML+A++ L  VV+ ++ LH YA  +  + R R        R +  V +   P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  RLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEFEERELGR 135
             +        +    S+GLDP+VI ++P+F +  E  K    +EC +CLSEFEE E GR
Sbjct: 84  TAA--------TSVVASRGLDPNVIKSLPVFTFSDETHK--DPIECAVCLSEFEESETGR 143

Query: 136 RLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREIGGEIVTE 195
            LP C H FH++CIDMW +SH++CP+CR+ V     +    +ES   + ERE+   + ++
Sbjct: 144 VLPNCQHTFHVDCIDMWFHSHSTCPLCRSLV-----ESLAGIESTAAAREREVVIAVDSD 203

Query: 196 ERRNCEIQRNEGQNGQFHSDSSSSSSSSSSS-------------SSLSSSSSSTDQPL-- 248
                E   + G   + H   SS      S              S      +  D P   
Sbjct: 204 PVLVIEPSSSSGLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDSPASQ 263

[Close]

BLAST of Cp4.1LG20g07950.1 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.1e-18
Identity = 79/219 (36.07%), Postives = 111/219 (50.68%), Query Frame = 0


Query: 14  SVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPRLSRFD 73
           S +S N  IMLA++I L + V+ +L  H+YA   F + ++RR    +S  L     +R D
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLF-RRQNRRIRRRISAHLRSLAAAR-D 79

Query: 74  SVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEFEERELGRRLPKCS 133
                S  +P   LDP+V+  IP+FVY  +  + + + EC +CLSEFEE + GR LPKC 
Sbjct: 80  PTQSSSSLSP---LDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDDEGRVLPKCG 139

Query: 134 HGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREIGGEIVTEERRNCE 193
           H FH++CID W  S +SCP+CRAPV                        + VTE      
Sbjct: 140 HVFHVDCIDTWFRSRSSCPLCRAPVQ---------------------PAQPVTEPEPVAA 199

Query: 194 IQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQPL 233
           +  +        + SSSSS  S SS+  SSS S    P+
Sbjct: 200 VFPSVKPIEDTEAGSSSSSDESESSTPSSSSGSPVRFPM 211

[Close]

BLAST of Cp4.1LG20g07950.1 vs. ExPASy Swiss-Prot
Match: Q9SLC3 (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 6.8e-17
Identity = 76/239 (31.80%), Postives = 119/239 (49.79%), Query Frame = 0


Query: 14  SVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPRLSRFD 73
           S +  NS IMLAA+ SL  V+L V  LH YA       R RR +       G P + R  
Sbjct: 23  STYDLNSKIMLAAVASLSGVILIVFALHLYARFVL---RRRREAFR-----GLPVIFRH- 82

Query: 74  SVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEFEERELGRRLPKCS 133
             PF+    P +GL+P+VI+++P F   + +   A+  EC +CLS  +E++  R LP C 
Sbjct: 83  --PFE---MPKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCK 142

Query: 134 HGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREIGGEIVTEERRNCE 193
           H FH++C+D WL + ++CPVCR  V     +    +E     G      +++ E R N  
Sbjct: 143 HIFHVDCVDTWLTTCSTCPVCRTEV-----EPRPRLEPEPREGPVGTAPQLLVETRLNLT 202

Query: 194 IQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQPLMSLGASLKRMLSRNRSDGRI 253
           ++              ++SSSSS + ++ S +S  +        S +++L+R RS  RI
Sbjct: 203 VE--------------AASSSSSDNKTVVSPASRLN--------SFRKILTRERSSNRI 220

[Close]

BLAST of Cp4.1LG20g07950.1 vs. NCBI nr
Match: XP_023519269.1 (RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 494 bits (1272), Expect = 1.03e-175
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60
           MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV
Sbjct: 1   MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60

Query: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120
           SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF
Sbjct: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120

Query: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREI 180
           EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREI
Sbjct: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREI 180

Query: 181 GGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQPLMSLGASLK 240
           GGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQPLMSLGASLK
Sbjct: 181 GGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQPLMSLGASLK 240

Query: 241 RMLSRNRSDGRIFPSSDGDELDV 263
           RMLSRNRSDGRIFPSSDGDELDV
Sbjct: 241 RMLSRNRSDGRIFPSSDGDELDV 263

[Close]

BLAST of Cp4.1LG20g07950.1 vs. NCBI nr
Match: XP_022964854.1 (RING-H2 finger protein ATL63-like [Cucurbita moschata])

HSP 1 Score: 483 bits (1244), Expect = 2.29e-171
Identity = 260/268 (97.01%), Postives = 261/268 (97.39%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60
           MAFNSTSLIGFAQS+FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60

Query: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120
           SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF
Sbjct: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120

Query: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREI 180
           EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDA DCSDAVESGRLSGEREI
Sbjct: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI 180

Query: 181 GGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSS-----LSSSSSSTDQPLMSL 240
           GGEIVTEERRNCEIQRNEGQNGQFHS SSSSSSSSSSSSS     LSSSSSSTDQPLMSL
Sbjct: 181 GGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPLMSL 240

Query: 241 GASLKRMLSRNRSDGRIFPSSDGDELDV 263
           GASLKRMLSRNRSDGRIFPSSDGDELDV
Sbjct: 241 GASLKRMLSRNRSDGRIFPSSDGDELDV 268

[Close]

BLAST of Cp4.1LG20g07950.1 vs. NCBI nr
Match: KAG6583350.1 (RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 481 bits (1239), Expect = 1.53e-170
Identity = 260/272 (95.59%), Postives = 261/272 (95.96%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60
           MAFNSTSLIGFAQS+FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60

Query: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120
           SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF
Sbjct: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120

Query: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREI 180
           EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDA DCSDAVES RLSGEREI
Sbjct: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESDRLSGEREI 180

Query: 181 GGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSS---------LSSSSSSTDQP 240
           GGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSS         LSSSSSSTDQP
Sbjct: 181 GGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQP 240

Query: 241 LMSLGASLKRMLSRNRSDGRIFPSSDGDELDV 263
           LMSLGASLKRMLSRNRSDGRIFPSSDGDELDV
Sbjct: 241 LMSLGASLKRMLSRNRSDGRIFPSSDGDELDV 272

[Close]

BLAST of Cp4.1LG20g07950.1 vs. NCBI nr
Match: KAG7019120.1 (RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 481 bits (1238), Expect = 2.26e-170
Identity = 260/273 (95.24%), Postives = 261/273 (95.60%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60
           MAFNSTSLIGFAQS+FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60

Query: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120
           SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF
Sbjct: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120

Query: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREI 180
           EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDA DCSDAVES RLSGEREI
Sbjct: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESDRLSGEREI 180

Query: 181 GGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSS----------LSSSSSSTDQ 240
           GGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSS          LSSSSSSTDQ
Sbjct: 181 GGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQ 240

Query: 241 PLMSLGASLKRMLSRNRSDGRIFPSSDGDELDV 263
           PLMSLGASLKRMLSRNRSDGRIFPSSDGDELDV
Sbjct: 241 PLMSLGASLKRMLSRNRSDGRIFPSSDGDELDV 273

[Close]

BLAST of Cp4.1LG20g07950.1 vs. NCBI nr
Match: XP_022970592.1 (RING-H2 finger protein ATL63-like [Cucurbita maxima])

HSP 1 Score: 477 bits (1227), Expect = 6.44e-169
Identity = 254/263 (96.58%), Postives = 256/263 (97.34%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60
           MAFNSTSLIGFAQS+FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60

Query: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120
           SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKC AVMECVICLSEF
Sbjct: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEF 120

Query: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREI 180
           EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDA DCSDAVESGRLSGEREI
Sbjct: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI 180

Query: 181 GGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQPLMSLGASLK 240
           GGEIVTEER NCEIQRNEGQNGQF+SDSSSSSSSSS    LSSSSSSTDQPLMSLGASLK
Sbjct: 181 GGEIVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSS----LSSSSSSTDQPLMSLGASLK 240

Query: 241 RMLSRNRSDGRIFPSSDGDELDV 263
           RMLSRNRSDGRIFPSSDGDELDV
Sbjct: 241 RMLSRNRSDGRIFPSSDGDELDV 259

[Close]

BLAST of Cp4.1LG20g07950.1 vs. ExPASy TrEMBL
Match: A0A6J1HPE0 (RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111464835 PE=4 SV=1)

HSP 1 Score: 483 bits (1244), Expect = 1.11e-171
Identity = 260/268 (97.01%), Postives = 261/268 (97.39%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60
           MAFNSTSLIGFAQS+FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60

Query: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120
           SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF
Sbjct: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120

Query: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREI 180
           EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDA DCSDAVESGRLSGEREI
Sbjct: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI 180

Query: 181 GGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSS-----LSSSSSSTDQPLMSL 240
           GGEIVTEERRNCEIQRNEGQNGQFHS SSSSSSSSSSSSS     LSSSSSSTDQPLMSL
Sbjct: 181 GGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQPLMSL 240

Query: 241 GASLKRMLSRNRSDGRIFPSSDGDELDV 263
           GASLKRMLSRNRSDGRIFPSSDGDELDV
Sbjct: 241 GASLKRMLSRNRSDGRIFPSSDGDELDV 268

[Close]

BLAST of Cp4.1LG20g07950.1 vs. ExPASy TrEMBL
Match: A0A6J1HZJ3 (RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111469533 PE=4 SV=1)

HSP 1 Score: 477 bits (1227), Expect = 3.12e-169
Identity = 254/263 (96.58%), Postives = 256/263 (97.34%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60
           MAFNSTSLIGFAQS+FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTV 60

Query: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEF 120
           SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKC AVMECVICLSEF
Sbjct: 61  SYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVMECVICLSEF 120

Query: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREI 180
           EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDA DCSDAVESGRLSGEREI
Sbjct: 121 EERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLSGEREI 180

Query: 181 GGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQPLMSLGASLK 240
           GGEIVTEER NCEIQRNEGQNGQF+SDSSSSSSSSS    LSSSSSSTDQPLMSLGASLK
Sbjct: 181 GGEIVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSS----LSSSSSSTDQPLMSLGASLK 240

Query: 241 RMLSRNRSDGRIFPSSDGDELDV 263
           RMLSRNRSDGRIFPSSDGDELDV
Sbjct: 241 RMLSRNRSDGRIFPSSDGDELDV 259

[Close]

BLAST of Cp4.1LG20g07950.1 vs. ExPASy TrEMBL
Match: A0A6J1GBH1 (RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111452651 PE=4 SV=1)

HSP 1 Score: 393 bits (1009), Expect = 3.29e-136
Identity = 214/266 (80.45%), Postives = 230/266 (86.47%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR---RTS 60
           MAFNSTSL  F QS+FSYNSN++LAALISLLLVVLFVLLLHAYANCFFP+PRHR   R+S
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICL 120
           VTVSYVLGPPRLSRF+S+PFD G A SKGLD SVISAIPLFVYESEEKKCA VMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGE 180
           SEFEERE+GRRLP C+HGFHLECIDMWLNSHA+CPVCRAPV+      ++AVESGRLSGE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVV------AEAVESGRLSGE 180

Query: 181 REIGGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQPLMSLGA 240
           REIG EIVTEER NCEIQRNE QNGQFHS SSSSSSS             TD PLMSLGA
Sbjct: 181 REIGEEIVTEERTNCEIQRNEEQNGQFHSSSSSSSSS-------------TDPPLMSLGA 240

Query: 241 SLKRMLSRNRSDGRIFPSSDGDELDV 263
           SLKRMLSRNRS+GRIFPSS+GDEL+V
Sbjct: 241 SLKRMLSRNRSNGRIFPSSNGDELNV 247

[Close]

BLAST of Cp4.1LG20g07950.1 vs. ExPASy TrEMBL
Match: A0A6J1KH83 (RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111493195 PE=4 SV=1)

HSP 1 Score: 388 bits (997), Expect = 2.21e-134
Identity = 211/266 (79.32%), Postives = 228/266 (85.71%), Query Frame = 0


Query: 1   MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR---RTS 60
           MAFNSTSL  F QS+FSYNSN++LAALISLLLVVLFVLLLHAYANCFFP+PRHR   R+S
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFFPRPRHRHAQRSS 60

Query: 61  VTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICL 120
           VTVSYVLGPPRLSRFDS+PFD G A SKGLD SVIS IPLFVYESEEKKCA VMECVICL
Sbjct: 61  VTVSYVLGPPRLSRFDSIPFDLGFAQSKGLDSSVISTIPLFVYESEEKKCATVMECVICL 120

Query: 121 SEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGE 180
           SEFEERE+GRRLP C+HGFHL+CIDMWLNSHA+CPVCRAPV+      ++AVES RLSGE
Sbjct: 121 SEFEEREIGRRLPICNHGFHLDCIDMWLNSHANCPVCRAPVV------AEAVESSRLSGE 180

Query: 181 REIGGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQPLMSLGA 240
           REIG EIVTEER NCEIQRNE QNGQFHS SSSS+SS             TD PLMSLGA
Sbjct: 181 REIGEEIVTEERTNCEIQRNEEQNGQFHSSSSSSNSS-------------TDPPLMSLGA 240

Query: 241 SLKRMLSRNRSDGRIFPSSDGDELDV 263
           SLKRMLSRNRS+GRIFPSS+GDEL+V
Sbjct: 241 SLKRMLSRNRSNGRIFPSSNGDELNV 247

[Close]

BLAST of Cp4.1LG20g07950.1 vs. ExPASy TrEMBL
Match: A0A5D3BFR6 (RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00790 PE=4 SV=1)

HSP 1 Score: 367 bits (942), Expect = 5.60e-126
Identity = 212/264 (80.30%), Postives = 224/264 (84.85%), Query Frame = 0


Query: 4   NSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRR-TSVTVSY 63
           NSTSL  FAQS+FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP PRHRR TSVTVSY
Sbjct: 5   NSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPHPRHRRRTSVTVSY 64

Query: 64  VLGPPRLSRFDSV-PFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEFE 123
           VL PPRLSRFDSV PFD G+APSKGLDPSVISAIPLFVYESEEKKCAA MECVICLSEFE
Sbjct: 65  VLAPPRLSRFDSVVPFDLGSAPSKGLDPSVISAIPLFVYESEEKKCAATMECVICLSEFE 124

Query: 124 ERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREIG 183
           ERELGRRLPKC HGFHLECIDMWLNSHA+CPVCR PV+G+A DCSDA ESG    E EIG
Sbjct: 125 ERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESG----EGEIG 184

Query: 184 GEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQP--LMSLGASL 243
            E V           NEGQ+GQF+SDSSSSSSSSSSSSS    SSS D P  + S+GASL
Sbjct: 185 RETV-----------NEGQSGQFNSDSSSSSSSSSSSSS----SSSIDPPPLMSSIGASL 244

Query: 244 KRMLSRNRSDGRIFPSSDGDELDV 263
            R+LSRNRSDGRIFPSS+G+ELDV
Sbjct: 245 IRILSRNRSDGRIFPSSNGEELDV 249

[Close]

BLAST of Cp4.1LG20g07950.1 vs. TAIR 10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63 )

HSP 1 Score: 136.0 bits (341), Expect = 4.5e-32
Identity = 110/283 (38.87%), Postives = 153/283 (54.06%), Query Frame = 0


Query: 6   TSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFP---------------Q 65
           +SL  F + + SYNSN++LAAL+ LLLVVLFVLLLH YA  F+                +
Sbjct: 13  SSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRR 72

Query: 66  PRHRRTSVTVSYVLGPPRLSRFD---SVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKC 125
            R+RR +VT + ++    L  FD   S P  +     KGLD SVIS+IPLFVYE  E++ 
Sbjct: 73  RRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEE 132

Query: 126 AAVMECVICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATD--- 185
               ECVICL  +E  + GR+L  C HGFH+ECIDMWL+SH++CP+CR+PVL   +D   
Sbjct: 133 DEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEEN 192

Query: 186 ---CSDAVE---------------SGRLSGEREIG------------GEIVTEERRNCEI 231
                +AVE                  +SG+R +             G+   EE    E+
Sbjct: 193 LKLAVNAVEEEAEVRLQMSPAGENESNVSGDRRVSLSLSVMEDDLKTGDDDGEEEVRIEV 252

[Close]

BLAST of Cp4.1LG20g07950.1 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.9e-22
Identity = 60/156 (38.46%), Postives = 85/156 (54.49%), Query Frame = 0


Query: 9   IGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPR 68
           +    S ++ N  IML+++I L + V+ +L  H+YA   F +   R      S+      
Sbjct: 15  VSHTSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSH------ 74

Query: 69  LSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYES------EEKKCAAVMECVICLSEFEE 128
           L    + P D      + LD +V+  IP+FVY S      EEK+     EC +CLSEFEE
Sbjct: 75  LRTLSASPRD------QALDQAVLDKIPIFVYSSKNPPPPEEKE-----ECSVCLSEFEE 134

Query: 129 RELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPV 159
            + GR LPKC H FH++CID W  S ++CP+CRAPV
Sbjct: 135 EDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of Cp4.1LG20g07950.1 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 95.5 bits (236), Expect = 6.7e-20
Identity = 80/260 (30.77%), Postives = 121/260 (46.54%), Query Frame = 0


Query: 16  FSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHR--------RTSVTVSYVLGPP 75
           ++ +  IML+A++ L  VV+ ++ LH YA  +  + R R        R +  V +   P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 76  RLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEFEERELGR 135
             +        +    S+GLDP+VI ++P+F +  E  K    +EC +CLSEFEE E GR
Sbjct: 84  TAA--------TSVVASRGLDPNVIKSLPVFTFSDETHK--DPIECAVCLSEFEESETGR 143

Query: 136 RLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREIGGEIVTE 195
            LP C H FH++CIDMW +SH++CP+CR+ V     +    +ES   + ERE+   + ++
Sbjct: 144 VLPNCQHTFHVDCIDMWFHSHSTCPLCRSLV-----ESLAGIESTAAAREREVVIAVDSD 203

Query: 196 ERRNCEIQRNEGQNGQFHSDSSSSSSSSSSS-------------SSLSSSSSSTDQPL-- 248
                E   + G   + H   SS      S              S      +  D P   
Sbjct: 204 PVLVIEPSSSSGLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDSPASQ 263

[Close]

BLAST of Cp4.1LG20g07950.1 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 92.8 bits (229), Expect = 4.4e-19
Identity = 79/219 (36.07%), Postives = 111/219 (50.68%), Query Frame = 0


Query: 14  SVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPRLSRFD 73
           S +S N  IMLA++I L + V+ +L  H+YA   F + ++RR    +S  L     +R D
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLF-RRQNRRIRRRISAHLRSLAAAR-D 79

Query: 74  SVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEFEERELGRRLPKCS 133
                S  +P   LDP+V+  IP+FVY  +  + + + EC +CLSEFEE + GR LPKC 
Sbjct: 80  PTQSSSSLSP---LDPTVLEKIPIFVYSVKTHE-SPLEECSVCLSEFEEDDEGRVLPKCG 139

Query: 134 HGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREIGGEIVTEERRNCE 193
           H FH++CID W  S +SCP+CRAPV                        + VTE      
Sbjct: 140 HVFHVDCIDTWFRSRSSCPLCRAPVQ---------------------PAQPVTEPEPVAA 199

Query: 194 IQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQPL 233
           +  +        + SSSSS  S SS+  SSS S    P+
Sbjct: 200 VFPSVKPIEDTEAGSSSSSDESESSTPSSSSGSPVRFPM 211

[Close]

BLAST of Cp4.1LG20g07950.1 vs. TAIR 10
Match: AT2G42360.1 (RING/U-box superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 4.8e-18
Identity = 76/239 (31.80%), Postives = 119/239 (49.79%), Query Frame = 0


Query: 14  SVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFFPQPRHRRTSVTVSYVLGPPRLSRFD 73
           S +  NS IMLAA+ SL  V+L V  LH YA       R RR +       G P + R  
Sbjct: 23  STYDLNSKIMLAAVASLSGVILIVFALHLYARFVL---RRRREAFR-----GLPVIFRH- 82

Query: 74  SVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVMECVICLSEFEERELGRRLPKCS 133
             PF+    P +GL+P+VI+++P F   + +   A+  EC +CLS  +E++  R LP C 
Sbjct: 83  --PFE---MPKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCK 142

Query: 134 HGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLSGEREIGGEIVTEERRNCE 193
           H FH++C+D WL + ++CPVCR  V     +    +E     G      +++ E R N  
Sbjct: 143 HIFHVDCVDTWLTTCSTCPVCRTEV-----EPRPRLEPEPREGPVGTAPQLLVETRLNLT 202

Query: 194 IQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQPLMSLGASLKRMLSRNRSDGRI 253
           ++              ++SSSSS + ++ S +S  +        S +++L+R RS  RI
Sbjct: 203 VE--------------AASSSSSDNKTVVSPASRLN--------SFRKILTRERSSNRI 220

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g07950.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUZ9	6.3e-31	38.87	RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1	[more]
O22255	2.7e-21	38.46	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q8L9T5	9.5e-19	30.77	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
Q9LZJ6	6.1e-18	36.07	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q9SLC3	6.8e-17	31.80	E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 ...	[more]

BLAST of Cp4.1LG20g07950.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519269.1	1.03e-175	100.00	RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo]	[more]
XP_022964854.1	2.29e-171	97.01	RING-H2 finger protein ATL63-like [Cucurbita moschata]	[more]
KAG6583350.1	1.53e-170	95.59	RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7019120.1	2.26e-170	95.24	RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022970592.1	6.44e-169	96.58	RING-H2 finger protein ATL63-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG20g07950.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HPE0	1.11e-171	97.01	RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111464835 ...	[more]
A0A6J1HZJ3	3.12e-169	96.58	RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111469533 PE...	[more]
A0A6J1GBH1	3.29e-136	80.45	RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111452651 ...	[more]
A0A6J1KH83	2.21e-134	79.32	RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111493195 PE...	[more]
A0A5D3BFR6	5.60e-126	80.30	RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Cp4.1LG20g07950.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58580.1	4.5e-32	38.87	TOXICOS EN LEVADURA 63	[more]
AT2G47560.1	1.9e-22	38.46	RING/U-box superfamily protein	[more]
AT3G16720.1	6.7e-20	30.77	TOXICOS EN LEVADURA 2	[more]
AT3G62690.1	4.4e-19	36.07	AtL5	[more]
AT2G42360.1	4.8e-18	31.80	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 113..154 e-value: 1.1E-6 score: 38.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 112..155 e-value: 5.1E-12 score: 45.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 113..155 score: 12.54829
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 78..159 e-value: 8.4E-22 score: 78.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..263
None	No IPR available	PANTHER	PTHR14155:SF514	CHROMATIN REGULATOR PHD FAMILY-RELATED	coord: 9..258
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 9..258
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 112..155 e-value: 1.09859E-18 score: 75.0391
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 112..159

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG20g07950	Cp4.1LG20g07950	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g07950.1:exon:001	Cp4.1LG20g07950.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g07950.1:cds:001	Cp4.1LG20g07950.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g07950.1	Cp4.1LG20g07950.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane