Cp4.1LG20g06450.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g06450.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Acyl carrier protein
Location	Cp4.1LG20: 4142340 .. 4150371 (+)
Sequence length	1619
RNA-Seq Expression	Cp4.1LG20g06450.1
Synteny	Cp4.1LG20g06450.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTCTTCTCAAACTCACGGTTGTACGTCGATGTGAATTTGATCCACTATAGCGAGTATCGTATCATTGCTAGGGGAAGGAATGTTCAACGTGCATGGGAGTTGCTAGGGGCGGCGCCCTGCAGGCTATCATTTCTATGTTTTATTGGCCGGATTTATTAGGGGAAAGACCATTCAGCCTATAATTCAAGTTAGTTCTATTGAAATTTATGTCCTAAAGTCTCTTAATTAATTATTTATCTGTAATAATTTTAATTATTATATCTGCAATTTAATAAAATCTAAATTTCGAAATGATTTTAATTTTAAATGGTTACAAATTTAATGGTTACAAAGTACGAAGGTTACCGACTCTTTAAATGACTAAGCATTTCATTTTGAGCCTATACAAACTATGTATGTTATTTTTGTAAAAGAGACCTGGAAAATGAAGTACAAAGAGCATTTGTGTTTTCTTTTAGCCAATGTGACAAGTTTTTTTATTTTATTTTATTCAATTATAAGTTGTTTAGATTGTATGTTTAAAATCATTCAAGTATGACATGATCATCTTGCTTGTGGAGTGATTGATTCGAATCTCAAACGAGTGTTATTACCTTGGGATATTTGATCAACAAGATAATTCGAATTTAACTTTCTCTTGGAGTGATTCCTTTATCATTAAAACTAAGTTTTTTTGCAATTCTACGTTGTTTAAGTTGCATGTTTAGAATCATTCAAACTTACATGATCGATCTTTCTTGTGGAGTGATTCAAATCTCAAATTCTCAAACAAGTATTATTGTCTTGAGATATTTGATCAACAAAGTAATCTGAATCTTACTTCACTGGCAGTGATTTCTTAATTTGGTATCAGATATTTCCTTTAAGTTGATTTTATATCATTTGGTATATGAGCTTTAGACTCAAGATTAGATATATGTTTCATTTGCTTTCTTTTGAATTTTTTTCTCCAAATTGTTCAGTTTTGTCCCTACCTGATAGTTATATGCAGTAAGTCGTTGTTGTTGTCTTTGCTTACATTCCCATGTAACACTAATTTCAATTTCTCAAATCTTGCTTTCAAAACTCTCTTTCGAAATCTCTCTGCCCCCGTTTTCTAAAACTTTCTTCTTGAACCGGAGCCAGAGGCTCGAGTATACATCGCTTGGCCGTAGGCGACGCAAGAACGAATAGGCTTAACTCACTCGTTAATAGGAAGTGTGTGCCTCACAATCGCAAGTCTTCTAATTAATTATTAATTTTTAACAATTTTGATTGTTATATCTCCGATTAATATTATACATTTTTGTAATTGTTACAAATGATTTGATTTAAACTATCTCGTGAGAACTTGTCCTTTAATTTGTATGAGTGATAATGATGATTTTTATATTCGATTCAATATGCTTAACATTTTGGAGACTTGACCAAATAAGGTGGTGTGTGTTAGACGAACACGACTCTCCACAATAGTATGATATTGTCCACTTTGAGCATAAGGGCTTTGCTTTGGGCTTCCCCAAAAGGTCTGCCCGATGTGGGGCTTTCATCACGAACAAAGTATACCTCCCCTTAATCGAGACTCGACTCCTCCTTCTTCTTCTTGGAGTCTTAGTCATTTCTTAACTATGCCTTCGAGGAGGCTCGACTTCTTTTTTTTTGGAGTCCTTCGTTCAACATCCGAGATTTACCAATCTATTGGCATGACTAAGTTTAGACATGACTCTGATACCATGTTAGAACTCTACACAATGGCATGATATTATCCACTTTGAGCATAAGCTCTCATGACTTTGCTTTGGGCTCCCCAAAAACCTCGTACCAATGAAGATAGTATTATTTGATTATAAACCCATGATCATTCCTTAAATTAGCGGACTTGAGACTTTCATCATCCAACACTGTAGAACATAATATTATGAGTTGAAGTTCACTCATTTCCACCCCGAAGAGATGAGTATTTTTTAAACAGAGTTAAAATTATTTTTTAAACAAAATATTAATATTTTAAAGATTTTTGTTTTTTCTAATTTTAAAATATTATTGAAATTTTTAAAATTTTAAATATTTTTCTTAGATAAAATATTAAAAGTTTTTACAAAAATATATTTTGTTGTACTTTTTAGGCAATTGCTATTTTATCTTGTTAACCCCTCAGTCTAGTGAAAGCTCCAAACTGGGAATCTTCTCGGAGGACTTGAAATGGCGATGGTATAACAGCCGCAGTTTCAATTTCAGGCAATTCGGCGGACGCTTCACTGAGAATATTTCCACCACCTTACAGCCAGTAGCTGCTAGTCTCGTAAGTAAATAGGTTTCCAACTTTTTTCTTTTTTTTTTTTTTNTCTTTACTTTTGTTGCAATCTTCCTCTTTCTTGCTTTTCTTTTCCAATTTTACAGATTCGTTGTATTATAGTTTGTTCGTAAGCCTATTTTTCTCACGATTTTGGGTAAAAATTTGTTGGTTTATGATAATGAAGGGTGAAATGTTTGAAGGAATCTGGATTTTTAGACGCTTTGTTTGTTTGGGGAATGTGTTTGGCATTTTAGGTTGCTGAGTTTGTCCTGATGTTTGAGCTATTTCAAGTTTTGCGTAGATTCCATCTAGGGTTTCTCTGTGATTCTTTTAAGCAGTGTGTAGTGTTCAGTAATGGACTCTGGAATGTGGAGTTGGTTTCTGAAACTTTTTGGGAAAAGGATGTGCTCATTAGATTAAGTCATTGGAAGTTGAAAGATGGTTCTATGAATACTCCCTAGGGGCGGATTTGGTTGTAATTGGGGTTGGAGTTTTGGGTGGGAGTTTAGTTGAAGGTTTGGGTTTAAGCCTCTGAGTGGAAGGATTTTGTAACACCCTTAAGTCCATCACTGGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTTCCCTCAAGGTTTTTAAAACGTGTTTGCTCGGCAAAGGTTTCCACATTCTTATAAAGAATGTTTCGTTCTCCTCCCCAACCGATGTGGGATATCACAATTCACCCCCTTCGGCACTCAGCGTCTTTGCTGCCACTCATTCCCTTCTCCAATCGATGTGGGACCCCCCTTCCTTCCCCCAATCCACCCCATTTGGGGCCAGCGTCTTTGCTGGCACACTGCTCGTGTCCACCACTCTTCGAGGCTCAGCCTCCTCGCTGCACATCGCTCAGTGTCTGCCTATGATACCATTTGTAACAGCCCAAACCCACCGCTAATAGATATTGTCCTCTTTGGGCTTTCTCTCAAGGTCTTTAAAATGCATATGCTAGGTAGAGATTTCCACACCTTTTTAAAGAATGCTTCATTCTCCTCCCCAACCTACATGGGATCTCACAGATTTCAAAATCAGAGAAAATTCTAATGGTTTGCTGGAGTTTATATTATGACTTGCAATGTCTTTATGTCAAGCAGTGGGCCAAATACCATGGCGATATCAAAGAAAATTACAAGTTTCATCCTTGAACTTTATAGTTGTATGTAACGAGTCCTAAACGTTAAAAATGCATCTAGTAACTTTCAATTTTGTTTCTAATATTCTTGAATTTTTTAAACCGTTGAACTTTCAATTTTGTGCTTAACAGGTCCCTAACTTATACAATATTTTTAAAAAAATATATGAATCTATTGGATACCAAATTCAAATGTTAACTTCCTACTAAACACAAAATTGAAAATTGAGGGAGAGACCTCTTGGATATTTTAAAAGTTTAAAAGTTTAATGATCTATTAAAAGTTTAAAAGTTTAATGATCTATTAAAAGTTTAAAAGTTTAATGATCTATTAGACACAAAATTGAAGGTATAAAGACCTATTATATTGTACTTTTAAAAACTATTTTAAGTTTTTGGATCTATAAGGTAGAACTCTGAATGTTTAGTGGATTAGCTTGTAATTTAATCCCAAAAAAATTTATACATCTAGCTACGAAGAAAGCACTGATTCCCATCCTCATTTCTGTTGGCTATCTAAAATCAGTTACATTCCTCCTCAACATAAACATCGAAGGCATTCCAAATGCATTCCAATTAGTGAAGCCCATCTCTAGTCCTTATCCTGTTCTGCCTGAGGCCTTTAGGTTAAACAGATGGCACTAAGAGCCCCAAAAAATGCCTTAAAGTAATCAGGGGACACCTGGTTTATGTATAGCATCCAAGGGACCCATTAAGGATCCTTTGTATGTCATATGGGTTTGATGACCAAGAAAAAGGAACTAACAGCAGCTGGAAAACAATCCTTTCTGTTGATTCTGCTTGAACGGGGTTAGGAACCCATTGCCATCGGTGTGGTTTACATATTTTAGGTGTTAAAATGTTGATTAGTGCTTGCTATTGTAATTAATTAGCAGCTAGGAACATCTTGGGGCTAATAAACGGGGTTAGGAACCCATCAGGACGGCCCTATAACAGTGGACGGAAAACATGATTCAATAAGGACCGAACAACTCTAGGACATGGACACTGTGTAGAGGTAACTAAAATATGTTTCTTTGATATATTCAAATACTTCTCTGCAGATTATTGGTTTGCTATTTTGAAAGGATTAAAATCATTTTTGTCGTATTCAAATTCACTATGAAACCTTACTTCAATCATTCAAAATCAACGTTTAATTTTACACTTTTGAAACTGATTTCCATATGATCAAAATTGAATTTCAAGGAAAACATGTTTTGGGGTGATTTTAAACGTGACAGTCTCAAACATGCACTTAATATACAAGACATGATGGATGAAGACAAAATTTAACACTTTTTAGAGAAGTTAGTGGTACTAGCAAATTTTTAATAATACAATGCATTATAACAACTATTTTGAAGAAAATCCGAAATGAAATATATGTTTCCTTCAATGGTTTTGGAAAGCCAAGTTTTAAATAGTCTTAAATGATCCCTGGAATTGTCACTTTGTTAGTGCTTTAGTTAAAAAGTTGACCGCAGTAAGTGTTTACATGGCTATGATTACGTAGCTTTTTAAATCATTTTTTAATAATACTTTTGCTTGTCTGGTAGCAGAAACTATTTGCTGCCTTTAGGTTCATTTCTTTGTCCATTTCGTTCTATGTTATTGACTTTTGATGTAACTCGTCTCTCCTCGAGGATGTCATGACCCCTTGAACTTTATACATTAATCTCAACTTTATGATGAACTATATTCTTGTTTATTATTATGAACAAAATATCATTTGTTATAATGTTTTTTGGCCTACAAAGTGATGTTTAGTGTAGGAAGTTCCGCCAATTTATTTTCATAACCTCCTTCAAACTTTTCACTCATGCCCTCTGTTTTCATTTCCTTTATTTATCATTTTTTTTTTTTTTTTCTTTTTGGTTGGTGACTTCCTGTTTCTGTACCAGTCTTTTTATGAATTGGAATTGTTTCTTGTGGATTTAGCTCAGATGGTGATGCATATCTACTTAGACATGCCCTTAAATTTCTTGATTTGGCTAACAAAATTTATGTAAAGCTGTTTATAGAGCTTGCTATTTTTTTAGTTTTCTGGTGCAAACATAGACGTTATAGCATAGCATTTTCCTAATCAAATTCATCCCCCCACCCCACCCCACGCACACCACGCGCACTTTCTAGCAAATATTGTATTTTATGTATTTTCTTTCGAGGACTCTTATAACAGTCTAAATCCACCGCTAGCAGATATTGTTCTCTTTGGGCTTCCCCTTTCGGGTTTCCCTTCAAGGTTTTTAAAACACGTCTACTAGGGAGAGGTTTCCACATCCTTAAAATGAATATTTTGTTCCTCACTCCAACCAATGTGGGATCTCACAATCCACCCTCTTGAGGCCCAGCGTCCTCGCTGGCACACCGCCCGAGGACTGACTCTGATACCATTTGTACGGTCCAAGCCCACCGCTATCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGTTTTTAAAACGCGTCTACTAGGGAGAGGTTTTCATACCCTTATAAGGAATGTTTCGTTCCCCTCTCCAACCGATGTGGGATCTCACAACTCTGATATTGTAACGTGTTTCAGTGGTTCTTGAAGTTGCAGGTTTGAGAAAAGTTAGATCTTGATAACTTAACATGCACGTGCAAAATTTATTTGTTGAACTCCCTTCATACACCGAGGATATTTCACATTTCAGACTTTGATAATTTGTATTCTATCTATGATACCGGAACTTGTCAATCCTTTGTTTTCGGACTGTAATGGAATTTGTTAATTTCAGCTCCTGTAAACATGCAAAGCATCAGATATTCAATCCTGAAGCACATGAAGATCAGAGTACCTAATACTACAACACAGTTGTTGATAAAGGATGAGAATATAATGGAAAAGCTAAGTTGCCATTTGTGCACATCAACAGATACAAGCTCCGACGAAATAGTTGATCGAGTGATTGGATTGGTTAAGAAGTTCGATAGAATTGATGCCTGTAAGGTAATTATCCAGGATCGATCACCTATCATCTCGTCTTTGAATTTTTATATCACTTGCCAGGATTTTTGTAGATTCACTCCTAATTATCATATGCTATTGAAACGACTGAGCAGGTTACTGAAACGGCTGATTTTCAGAAGGACTTAAGCCTGGACAGCTTGGACAGGGTGGAGCTTGTTATGGCTTTTGAACAGGAATTCTCCATTGAAATCCCAGATGAAAAGGCAGATAAGCTTACCTGCTGTGCCGATGTAGCACGATACATAGCTTCTCAAGTAGAGGAAAATAAAGAGGAGAAACACTGAACGACTTCAGTTTTTCGTCATACATCATCGTGTAATGCTCATTAACTAATGCTTTCTTGTTCGCTATATGAACTGATCTTATGATAGTTCATCTTTTGTTTGGGATTAGATCATCCATCAGGCTATGCACTGATTGTTAAAGAACACACGATCTCTTTGGCTCCCAATAGAATTTTAAGGGTAGAATTACACCTTGTGAGTAAGTTCAACTGTGTGGAAGACTCGATGCAGCATCTGTCGTATTTGGTATGAAATAGATTGCGGTATTACATAATCTAGATGTTTTTATACACAAACGATACATATTTATGCAAGCTCGATTTATCGTGCTAACTATGAACGAATAACTCATCATTGTGACTCAGCGCCATCTACATGAGCCATATATTCTGGTCTGTAACCAATTACTTCACTTTACTAGGCTTCTCTTGTGGTCTGATGGTTAATCCTCCCCTCTTATACAAGCTTGCAGAGGTCGAGATGTTTGGTGCTGCAGCCTAAGGATGCCAGAAGTATATGTCCTTATGCCACCTCCGAACGACGATAATTGCAGCTGTTCACTGCCAGCTAAATGAGCAGGTCGACAGCGTGTGTTCTTCGGTGTCCGAAGAATCTTGATAGAACAGGCCTTTTCGAAGCTGCTGGTTGCATGAAGATGGGATGGAATATCAATAACAAAGTCTCCAAATTCATCGGTAACTCCATTAACCCATTCATAAGATTTGCTGTTTTTTCCAGTGTTCTTGCAATTCACACCCACCATGGCACCTGCAGTGATTGATTTTAAACTCATCAGAAAGGTAAAAACCAAGCTTGATTTCATAGGTGGTGTTTTTGAACTAAGAAATTAGCTGCTATTGTGTTACCTTCAATAGGCCATGCATGAACTTGATGTTCATCACCATGCAAACAAGCTTCACAAAGAACAGAGCCTGTGACCAAAACTGTGGACAGTCTCTCCTCGCCATATCCAGCTATCTGTCTCCAATCATCTCGACCCAAAAGATCGGATAACGGGGTCTCGCCTTCTGCATATTCGACTACCATCGGAAATCCATGGCCGAAAAGGAGGAAGAAGAAGAAGAAGAAACGAATCGAAAACAGGCTGACAGAATTATGGAAGCTACAAACTCTGGTAATCATCTTCTTGCTTTATCAATCAATCTGACACCATTTTTAGATACATATGCATTGGTTTATATAATGTTATAACAAAAGAGACGACCCTACACGTCGAATTTACAGAAATACCCCTTCCGGGTTTGACGTTGACCAGGCAGTTCCTCTATGTTGGATTT

mRNA sequence

ATGGGCAATTGCTATTTTATCTTGTTAACCCCTCAGTCTAGTGAAAGCTCCAAACTGGGAATCTTCTCGGAGGACTTGAAATGGCGATGGTATAACAGCCGCAGTTTCAATTTCAGGCAATTCGGCGGACGCTTCACTGAGAATATTTCCACCACCTTACAGCCAGTAGCTGCTACTCCTGTAAACATGCAAAGCATCAGATATTCAATCCTGAAGCACATGAAGATCAGAGTACCTAATACTACAACACAGTTGTTGATAAAGGATGAGAATATAATGGAAAAGCTAAGTTGCCATTTGTGCACATCAACAGATACAAGCTCCGACGAAATAGTTGATCGAGTGATTGGATTGGTTAAGAAGTTCGATAGAATTGATGCCTGTAAGGTTACTGAAACGGCTGATTTTCAGAAGGACTTAAGCCTGGACAGCTTGGACAGGGTGGAGCTTGTTATGGCTTTTGAACAGGAATTCTCCATTGAAATCCCAGATGAAAAGGCAGATAAGCTTACCTGCTGTGCCGATGTAGCACGATACATAGCTTCTCAAGTAGAGGAAAATAAAGAGGAGAAACACTGAACGACTTCAGTTTTTCGTCATACATCATCGTATCATCCATCAGGCTATGCACTGATTGTTAAAGAACACACGATCTCTTTGGCTCCCAATAGAATTTTAAGGGTAGAATTACACCTTGTGAGTAAGTTCAACTGTGTGGAAGACTCGATGCAGCATCTGTCGTATTTGGTATGAAATAGATTGCGGTATTACATAATCTAGATGTTTTTATACACAAACGATACATATTTATGCAAGCTCGATTTATCGTGCTAACTATGAACGAATAACTCATCATTGTGACTCAGCGCCATCTACATGAGCCATATATTCTGGTCTGTAACCAATTACTTCACTTTACTAGGCTTCTCTTGTGGTCTGATGGTTAATCCTCCCCTCTTATACAAGCTTGCAGAGGTCGAGATGTTTGGTGCTGCAGCCTAAGGATGCCAGAAGTATATGTCCTTATGCCACCTCCGAACGACGATAATTGCAGCTGTTCACTGCCAGCTAAATGAGCAGGTCGACAGCGTGTGTTCTTCGGTGTCCGAAGAATCTTGATAGAACAGGCCTTTTCGAAGCTGCTGGTTGCATGAAGATGGGATGGAATATCAATAACAAAGTCTCCAAATTCATCGGCCATGCATGAACTTGATGTTCATCACCATGCAAACAAGCTTCACAAAGAACAGAGCCTGTGACCAAAACTGTGGACAGTCTCTCCTCGCCATATCCAGCTATCTGTCTCCAATCATCTCGACCCAAAAGATCGGATAACGGGGTCTCGCCTTCTGCATATTCGACTACCATCGGAAATCCATGGCCGAAAAGGAGGAAGAAGAAGAAGAAGAAACGAATCGAAAACAGGCTGACAGAATTATGGAAGCTACAAACTCTGGTAATCATCTTCTTGCTTTATCAATCAATCTGACACCATTTTTAGATACATATGCATTGGTTTATATAATGTTATAACAAAAGAGACGACCCTACACGTCGAATTTACAGAAATACCCCTTCCGGGTTTGACGTTGACCAGGCAGTTCCTCTATGTTGGATTT

Coding sequence (CDS)

ATGGGCAATTGCTATTTTATCTTGTTAACCCCTCAGTCTAGTGAAAGCTCCAAACTGGGAATCTTCTCGGAGGACTTGAAATGGCGATGGTATAACAGCCGCAGTTTCAATTTCAGGCAATTCGGCGGACGCTTCACTGAGAATATTTCCACCACCTTACAGCCAGTAGCTGCTACTCCTGTAAACATGCAAAGCATCAGATATTCAATCCTGAAGCACATGAAGATCAGAGTACCTAATACTACAACACAGTTGTTGATAAAGGATGAGAATATAATGGAAAAGCTAAGTTGCCATTTGTGCACATCAACAGATACAAGCTCCGACGAAATAGTTGATCGAGTGATTGGATTGGTTAAGAAGTTCGATAGAATTGATGCCTGTAAGGTTACTGAAACGGCTGATTTTCAGAAGGACTTAAGCCTGGACAGCTTGGACAGGGTGGAGCTTGTTATGGCTTTTGAACAGGAATTCTCCATTGAAATCCCAGATGAAAAGGCAGATAAGCTTACCTGCTGTGCCGATGTAGCACGATACATAGCTTCTCAAGTAGAGGAAAATAAAGAGGAGAAACACTGA

Protein sequence

MGNCYFILLTPQSSESSKLGIFSEDLKWRWYNSRSFNFRQFGGRFTENISTTLQPVAATPVNMQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENKEEKH

Homology

[Close]

BLAST of Cp4.1LG20g06450.1 vs. ExPASy Swiss-Prot
Match: Q9FGJ4 (Acyl carrier protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP2 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.6e-29
Identity = 73/131 (55.73%), Postives = 90/131 (68.70%), Query Frame = 0


Query: 63  MQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTS---TDTSSDEIVDRVIGLV 122
           M  IR SIL+H+++RV    T LL ++EN  + +     TS    D   D+I+ RVI LV
Sbjct: 1   MHCIRSSILQHLRLRVSVRPTSLL-QNENGFKSIGIFNFTSEAAADGGQDQILSRVIELV 60

Query: 123 KKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARY 182
           KK+D+ +  +VTE ADFQKDLSLDSLD+ ELVMA E+EFSIEIPDEKADKLTCC DVA Y
Sbjct: 61  KKYDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATY 120

Query: 183 IASQVEENKEE 191
           I S+      E
Sbjct: 121 ILSETPTKASE 130

[Close]

BLAST of Cp4.1LG20g06450.1 vs. ExPASy Swiss-Prot
Match: P53665 (Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP1 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 7.2e-16
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 65  SIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTSTDTSSDEIVDRVIGLVKKFDR 124
           ++R +IL+H  +RVP  T  L       +  +          S + +VDRV+ +VK F +
Sbjct: 2   ALRNAILRH--LRVPVQTLGLNQSKIGFLGTIRSFSSHDDHLSREAVVDRVLDVVKSFPK 61

Query: 125 IDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYI 181
           +D  KVT    FQ DL LDSLD VE+VMA E+EF +EIPD++ADK+  C+    Y+
Sbjct: 62  VDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYV 115

[Close]

BLAST of Cp4.1LG20g06450.1 vs. ExPASy Swiss-Prot
Match: O80800 (Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP2 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.1e-14
Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 110 EIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADK 169
           E+ DRV+ +VK F ++D  KVT  A+FQ DL LDSLD VE+VMA E+EF  EIPD +ADK
Sbjct: 49  EVTDRVLSVVKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADK 108

Query: 170 LTCCADVARYIAS 183
           +        +IAS
Sbjct: 109 IQSIDLAVDFIAS 121

[Close]

BLAST of Cp4.1LG20g06450.1 vs. ExPASy Swiss-Prot
Match: Q54E22 (Acyl carrier protein, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=ndufab1 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 8.7e-14
Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = 0


Query: 107 SSDEIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEK 166
           S  EI DRVIG+V ++D++    VT T  F K+L LDSLD  ++++A E+EF IEIPDE+
Sbjct: 41  SEKEITDRVIGVVSQYDKVSGKTVTPTTTF-KELGLDSLDSADILVAVEEEFGIEIPDEE 100

Query: 167 ADKLTCCADVARYI 181
           ADK+T CA+   Y+
Sbjct: 101 ADKITSCAETISYL 113

[Close]

BLAST of Cp4.1LG20g06450.1 vs. ExPASy Swiss-Prot
Match: Q9CR21 (Acyl carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Ndufab1 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.3e-13
Identity = 40/89 (44.94%), Postives = 57/89 (64.04%), Query Frame = 0


Query: 99  HLC----TSTDTSSDEIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVELVMAF 158
           HLC     +   + D I DRV+ ++K +D+ID  K++  + F KDL LDSLD+VE++MA 
Sbjct: 63  HLCRQYSDAPPLTLDGIKDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAM 122

Query: 159 EQEFSIEIPDEKADKLTCCADVARYIASQ 184
           E EF  EIPD  A+KL C  ++  YIA +
Sbjct: 123 EDEFGFEIPDIDAEKLMCPQEIVDYIADK 151

[Close]

BLAST of Cp4.1LG20g06450.1 vs. NCBI nr
Match: XP_023520171.1 (acyl carrier protein 3, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023520172.1 acyl carrier protein 3, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254 bits (650), Expect = 3.43e-84
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 63  MQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTSTDTSSDEIVDRVIGLVKKF 122
           MQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTSTDTSSDEIVDRVIGLVKKF
Sbjct: 1   MQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTSTDTSSDEIVDRVIGLVKKF 60

Query: 123 DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIAS 182
           DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIAS
Sbjct: 61  DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIAS 120

Query: 183 QVEENKEEKH 192
           QVEENKEEKH
Sbjct: 121 QVEENKEEKH 130

[Close]

BLAST of Cp4.1LG20g06450.1 vs. NCBI nr
Match: XP_022927338.1 (acyl carrier protein 3, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 253 bits (645), Expect = 4.30e-83
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 61  VNMQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTSTDTSSDEIVDRVIGLVK 120
           VNMQSIRYSILKHMKIRVPNTTTQLLIKDENIM+KLS HLCTSTDTSSDEIVDRVIGLVK
Sbjct: 22  VNMQSIRYSILKHMKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVK 81

Query: 121 KFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYI 180
           KFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYI
Sbjct: 82  KFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYI 141

Query: 181 ASQVEENKEEKH 192
           ASQVEENKEEKH
Sbjct: 142 ASQVEENKEEKH 153

[Close]

BLAST of Cp4.1LG20g06450.1 vs. NCBI nr
Match: XP_023001631.1 (acyl carrier protein 3, mitochondrial [Cucurbita maxima] >XP_023001632.1 acyl carrier protein 3, mitochondrial [Cucurbita maxima])

HSP 1 Score: 250 bits (638), Expect = 2.31e-82
Identity = 129/130 (99.23%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 63  MQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTSTDTSSDEIVDRVIGLVKKF 122
           MQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLS HLCTSTDTSSDEIVDRVIGLVKKF
Sbjct: 1   MQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSRHLCTSTDTSSDEIVDRVIGLVKKF 60

Query: 123 DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIAS 182
           DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIAS
Sbjct: 61  DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIAS 120

Query: 183 QVEENKEEKH 192
           QVEENKEEKH
Sbjct: 121 QVEENKEEKH 130

[Close]

BLAST of Cp4.1LG20g06450.1 vs. NCBI nr
Match: XP_022927340.1 (acyl carrier protein 3, mitochondrial isoform X2 [Cucurbita moschata] >KAG7019387.1 Acyl carrier protein 3, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 249 bits (635), Expect = 6.61e-82
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 63  MQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTSTDTSSDEIVDRVIGLVKKF 122
           MQSIRYSILKHMKIRVPNTTTQLLIKDENIM+KLS HLCTSTDTSSDEIVDRVIGLVKKF
Sbjct: 1   MQSIRYSILKHMKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKF 60

Query: 123 DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIAS 182
           DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIAS
Sbjct: 61  DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIAS 120

Query: 183 QVEENKEEKH 192
           QVEENKEEKH
Sbjct: 121 QVEENKEEKH 130

[Close]

BLAST of Cp4.1LG20g06450.1 vs. NCBI nr
Match: XP_038895695.1 (acyl carrier protein 3, mitochondrial [Benincasa hispida] >XP_038895696.1 acyl carrier protein 3, mitochondrial [Benincasa hispida])

HSP 1 Score: 229 bits (584), Expect = 3.87e-74
Identity = 119/129 (92.25%), Postives = 122/129 (94.57%), Query Frame = 0


Query: 63  MQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTSTDTSSDEIVDRVIGLVKKF 122
           MQSIR SILKHMKIR PNTTTQLL+KDEN+MEKL+ HLCTST  SSDEIVDRVIGLVKKF
Sbjct: 1   MQSIRNSILKHMKIRGPNTTTQLLMKDENVMEKLTRHLCTSTGRSSDEIVDRVIGLVKKF 60

Query: 123 DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIAS 182
           DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYI S
Sbjct: 61  DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYITS 120

Query: 183 QVEENKEEK 191
           QVEE KEEK
Sbjct: 121 QVEEKKEEK 129

[Close]

BLAST of Cp4.1LG20g06450.1 vs. ExPASy TrEMBL
Match: A0A6J1EKQ6 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111434196 PE=3 SV=1)

HSP 1 Score: 253 bits (645), Expect = 2.08e-83
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 61  VNMQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTSTDTSSDEIVDRVIGLVK 120
           VNMQSIRYSILKHMKIRVPNTTTQLLIKDENIM+KLS HLCTSTDTSSDEIVDRVIGLVK
Sbjct: 22  VNMQSIRYSILKHMKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVK 81

Query: 121 KFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYI 180
           KFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYI
Sbjct: 82  KFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYI 141

Query: 181 ASQVEENKEEKH 192
           ASQVEENKEEKH
Sbjct: 142 ASQVEENKEEKH 153

[Close]

BLAST of Cp4.1LG20g06450.1 vs. ExPASy TrEMBL
Match: A0A6J1KJ66 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111495700 PE=3 SV=1)

HSP 1 Score: 250 bits (638), Expect = 1.12e-82
Identity = 129/130 (99.23%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 63  MQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTSTDTSSDEIVDRVIGLVKKF 122
           MQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLS HLCTSTDTSSDEIVDRVIGLVKKF
Sbjct: 1   MQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSRHLCTSTDTSSDEIVDRVIGLVKKF 60

Query: 123 DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIAS 182
           DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIAS
Sbjct: 61  DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIAS 120

Query: 183 QVEENKEEKH 192
           QVEENKEEKH
Sbjct: 121 QVEENKEEKH 130

[Close]

BLAST of Cp4.1LG20g06450.1 vs. ExPASy TrEMBL
Match: A0A6J1ENM4 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111434196 PE=3 SV=1)

HSP 1 Score: 249 bits (635), Expect = 3.20e-82
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 63  MQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTSTDTSSDEIVDRVIGLVKKF 122
           MQSIRYSILKHMKIRVPNTTTQLLIKDENIM+KLS HLCTSTDTSSDEIVDRVIGLVKKF
Sbjct: 1   MQSIRYSILKHMKIRVPNTTTQLLIKDENIMDKLSRHLCTSTDTSSDEIVDRVIGLVKKF 60

Query: 123 DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIAS 182
           DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIAS
Sbjct: 61  DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIAS 120

Query: 183 QVEENKEEKH 192
           QVEENKEEKH
Sbjct: 121 QVEENKEEKH 130

[Close]

BLAST of Cp4.1LG20g06450.1 vs. ExPASy TrEMBL
Match: A0A1S4E499 (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103501710 PE=3 SV=1)

HSP 1 Score: 214 bits (545), Expect = 2.10e-68
Identity = 111/132 (84.09%), Postives = 120/132 (90.91%), Query Frame = 0


Query: 60  PVNMQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTSTDTSSDEIVDRVIGLV 119
           P NMQSIR SILKHMKIR PN TT+ L+KDEN++EKL+  LCTST  SS+EI DRVIGLV
Sbjct: 6   PANMQSIRNSILKHMKIRGPNNTTKQLMKDENVIEKLTRCLCTSTGRSSNEIADRVIGLV 65

Query: 120 KKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARY 179
           KKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDE+ADKLTCCA+VARY
Sbjct: 66  KKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEQADKLTCCANVARY 125

Query: 180 IASQVEENKEEK 191
           I SQVE+ KEEK
Sbjct: 126 ITSQVEKKKEEK 137

[Close]

BLAST of Cp4.1LG20g06450.1 vs. ExPASy TrEMBL
Match: A0A6J1CN02 (Acyl carrier protein OS=Momordica charantia OX=3673 GN=LOC111012616 PE=3 SV=1)

HSP 1 Score: 213 bits (541), Expect = 6.56e-68
Identity = 109/128 (85.16%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 63  MQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTSTDTSSDEIVDRVIGLVKKF 122
           MQSI  SILKHM+IR+PNTTT L +KDE +MEKL+ HLCTS  TSSD+IVDRVIGLVKKF
Sbjct: 1   MQSISNSILKHMRIRIPNTTTWLFMKDETVMEKLTXHLCTSKGTSSDQIVDRVIGLVKKF 60

Query: 123 DRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYIAS 182
           DRIDA KVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYI S
Sbjct: 61  DRIDASKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYITS 120

Query: 183 QVEENKEE 190
           +VEE +EE
Sbjct: 121 KVEEEREE 128

[Close]

BLAST of Cp4.1LG20g06450.1 vs. TAIR 10
Match: AT5G47630.1 (mitochondrial acyl carrier protein 3 )

HSP 1 Score: 128.3 bits (321), Expect = 6.8e-30
Identity = 73/131 (55.73%), Postives = 90/131 (68.70%), Query Frame = 0


Query: 63  MQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTS---TDTSSDEIVDRVIGLV 122
           M  IR SIL+H+++RV    T LL ++EN  + +     TS    D   D+I+ RVI LV
Sbjct: 1   MHCIRSSILQHLRLRVSVRPTSLL-QNENGFKSIGIFNFTSEAAADGGQDQILSRVIELV 60

Query: 123 KKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARY 182
           KK+D+ +  +VTE ADFQKDLSLDSLD+ ELVMA E+EFSIEIPDEKADKLTCC DVA Y
Sbjct: 61  KKYDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATY 120

Query: 183 IASQVEENKEE 191
           I S+      E
Sbjct: 121 ILSETPTKASE 130

[Close]

BLAST of Cp4.1LG20g06450.1 vs. TAIR 10
Match: AT5G47630.2 (mitochondrial acyl carrier protein 3 )

HSP 1 Score: 128.3 bits (321), Expect = 6.8e-30
Identity = 73/131 (55.73%), Postives = 90/131 (68.70%), Query Frame = 0


Query: 63  MQSIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTS---TDTSSDEIVDRVIGLV 122
           M  IR SIL+H+++RV    T LL ++EN  + +     TS    D   D+I+ RVI LV
Sbjct: 1   MHCIRSSILQHLRLRVSVRPTSLL-QNENGFKSIGIFNFTSEAAADGGQDQILSRVIELV 60

Query: 123 KKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARY 182
           KK+D+ +  +VTE ADFQKDLSLDSLD+ ELVMA E+EFSIEIPDEKADKLTCC DVA Y
Sbjct: 61  KKYDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATY 120

Query: 183 IASQVEENKEE 191
           I S+      E
Sbjct: 121 ILSETPTKASE 130

[Close]

BLAST of Cp4.1LG20g06450.1 vs. TAIR 10
Match: AT2G44620.1 (mitochondrial acyl carrier protein 1 )

HSP 1 Score: 85.5 bits (210), Expect = 5.1e-17
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 65  SIRYSILKHMKIRVPNTTTQLLIKDENIMEKLSCHLCTSTDTSSDEIVDRVIGLVKKFDR 124
           ++R +IL+H  +RVP  T  L       +  +          S + +VDRV+ +VK F +
Sbjct: 2   ALRNAILRH--LRVPVQTLGLNQSKIGFLGTIRSFSSHDDHLSREAVVDRVLDVVKSFPK 61

Query: 125 IDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADKLTCCADVARYI 181
           +D  KVT    FQ DL LDSLD VE+VMA E+EF +EIPD++ADK+  C+    Y+
Sbjct: 62  VDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYV 115

[Close]

BLAST of Cp4.1LG20g06450.1 vs. TAIR 10
Match: AT1G65290.1 (mitochondrial acyl carrier protein 2 )

HSP 1 Score: 79.3 bits (194), Expect = 3.6e-15
Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 110 EIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVELVMAFEQEFSIEIPDEKADK 169
           E+ DRV+ +VK F ++D  KVT  A+FQ DL LDSLD VE+VMA E+EF  EIPD +ADK
Sbjct: 49  EVTDRVLSVVKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADK 108

Query: 170 LTCCADVARYIAS 183
           +        +IAS
Sbjct: 109 IQSIDLAVDFIAS 121

[Close]

BLAST of Cp4.1LG20g06450.1 vs. TAIR 10
Match: AT3G05020.1 (acyl carrier protein 1 )

HSP 1 Score: 49.3 bits (116), Expect = 4.0e-06
Identity = 29/98 (29.59%), Postives = 47/98 (47.96%), Query Frame = 0


Query: 91  NIMEKLSCHLCTSTDTSSDEIVDRVIGLVKKFDRIDACKVTETADFQKDLSLDSLDRVEL 150
           N+   +     + +  +  E +++V  +VKK   +   K         DL  DSLD VE+
Sbjct: 40  NLRRSIPSRRLSVSCAAKQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEI 99

Query: 151 VMAFEQEFSIEIPDEKADKLTCCADVARYIASQVEENK 189
           VM  E+EF+I++ +EKA K+      A  I   + E K
Sbjct: 100 VMGLEEEFNIQMAEEKAQKIATVEQAAELIEELINEKK 137

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g06450.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGJ4	9.6e-29	55.73	Acyl carrier protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP2 ...	[more]
P53665	7.2e-16	40.52	Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP1 ...	[more]
O80800	5.1e-14	53.42	Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTACP2 ...	[more]
Q54E22	8.7e-14	51.35	Acyl carrier protein, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=nduf...	[more]
Q9CR21	4.3e-13	44.94	Acyl carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Ndufab1 PE=1 SV=...	[more]

BLAST of Cp4.1LG20g06450.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520171.1	3.43e-84	100.00	acyl carrier protein 3, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023520172...	[more]
XP_022927338.1	4.30e-83	98.48	acyl carrier protein 3, mitochondrial isoform X1 [Cucurbita moschata]	[more]
XP_023001631.1	2.31e-82	99.23	acyl carrier protein 3, mitochondrial [Cucurbita maxima] >XP_023001632.1 acyl ca...	[more]
XP_022927340.1	6.61e-82	98.46	acyl carrier protein 3, mitochondrial isoform X2 [Cucurbita moschata] >KAG701938...	[more]
XP_038895695.1	3.87e-74	92.25	acyl carrier protein 3, mitochondrial [Benincasa hispida] >XP_038895696.1 acyl c...	[more]

BLAST of Cp4.1LG20g06450.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EKQ6	2.08e-83	98.48	Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111434196 PE=3 SV=1	[more]
A0A6J1KJ66	1.12e-82	99.23	Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111495700 PE=3 SV=1	[more]
A0A6J1ENM4	3.20e-82	98.46	Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111434196 PE=3 SV=1	[more]
A0A1S4E499	2.10e-68	84.09	Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103501710 PE=3 SV=1	[more]
A0A6J1CN02	6.56e-68	85.16	Acyl carrier protein OS=Momordica charantia OX=3673 GN=LOC111012616 PE=3 SV=1	[more]

BLAST of Cp4.1LG20g06450.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47630.1	6.8e-30	55.73	mitochondrial acyl carrier protein 3	[more]
AT5G47630.2	6.8e-30	55.73	mitochondrial acyl carrier protein 3	[more]
AT2G44620.1	5.1e-17	40.52	mitochondrial acyl carrier protein 1	[more]
AT1G65290.1	3.6e-15	53.42	mitochondrial acyl carrier protein 2	[more]
AT3G05020.1	4.0e-06	29.59	acyl carrier protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003231	Acyl carrier protein (ACP)	TIGRFAM	TIGR00517	TIGR00517	coord: 109..183 e-value: 2.0E-22 score: 76.8
IPR003231	Acyl carrier protein (ACP)	PANTHER	PTHR20863	ACYL CARRIER PROTEIN	coord: 60..189
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 110..184 score: 16.257858
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 114..180 e-value: 3.0E-9 score: 37.1
IPR009081	Phosphopantetheine binding ACP domain	PROSITE	PS50075	CARRIER	coord: 109..184 score: 17.727859
IPR036736	ACP-like superfamily	GENE3D	1.10.1200.10		coord: 101..191 e-value: 7.2E-25 score: 89.0
IPR036736	ACP-like superfamily	SUPERFAMILY	47336	ACP-like	coord: 107..187
None	No IPR available	PANTHER	PTHR20863:SF60	ACYL CARRIER PROTEIN 3, MITOCHONDRIAL	coord: 60..189

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG20g06450	Cp4.1LG20g06450	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g06450.1:exon:001	Cp4.1LG20g06450.1:exon:001	exon
Cp4.1LG20g06450.1:exon:002	Cp4.1LG20g06450.1:exon:002	exon
Cp4.1LG20g06450.1:exon:003	Cp4.1LG20g06450.1:exon:003	exon
Cp4.1LG20g06450.1:exon:004	Cp4.1LG20g06450.1:exon:004	exon
Cp4.1LG20g06450.1:exon:005	Cp4.1LG20g06450.1:exon:005	exon
Cp4.1LG20g06450.1:exon:006	Cp4.1LG20g06450.1:exon:006	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g06450.1:cds:001	Cp4.1LG20g06450.1:cds:001	CDS
Cp4.1LG20g06450.1:cds:002	Cp4.1LG20g06450.1:cds:002	CDS
Cp4.1LG20g06450.1:cds:003	Cp4.1LG20g06450.1:cds:003	CDS
Cp4.1LG20g06450.1:cds:004	Cp4.1LG20g06450.1:cds:004	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g06450.1:three_prime_utr:001	Cp4.1LG20g06450.1:three_prime_utr:001	three_prime_UTR
Cp4.1LG20g06450.1:three_prime_utr:002	Cp4.1LG20g06450.1:three_prime_utr:002	three_prime_UTR
Cp4.1LG20g06450.1:three_prime_utr:003	Cp4.1LG20g06450.1:three_prime_utr:003	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g06450.1	Cp4.1LG20g06450.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0000036	acyl carrier activity