Cp4.1LG20g02280.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g02280.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	dof zinc finger protein DOF5.6
Location	Cp4.1LG20: 1369484 .. 1371377 (+)
Sequence length	1780
RNA-Seq Expression	Cp4.1LG20g02280.1
Synteny	Cp4.1LG20g02280.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGCTTTACCCTTCCTTGTGGGGTACCACCACCCTACACACAGTCTTGGGATGGGACCCACTTTGACATCATCTCTGCTGCTAACGCACTCCCTCCCTTCCGTCTCTTCAAATATACCCTTTTTTTCTTCCTTCTTATTCACATCCCCTTCTTATAAACAGAGGAACTGAAACAGAGGAACAATGGAGTGACTGTGAAGTGAAGTTTTTGTTTGGCTGTTGGAAACATCTTTTTCTTTCTGCTCTGTTCTTCATTCATATGGGTTTAACTTCTCTACAAGTCTGCATGGACTCCTCTGATTGGCTGCAGGTAAGAACATCAACCAATTCCCATGATTATCAGAACAGAGCAGAAAACAGAACAGAACAGAGCAAATGTCTCTGTTTTTTGTGACTGTTTTTTTTTTTTTTTCTTTGGTTTCAGGGCACCATTAACGAGGAGTCTGGCATGGATTCTTCGTCGCTATCAGGGGACATGCTGTCATGTTCAAGGCCGCTGACAGAGAGGAGGCTTAGACCACCACATGATCAAGCACTGAAATGCCCAAGATGTGACTCAACGCACACCAAATTTTGCTACTACAACAATTACAGCCTCACCCAGCCGCGTTACTTTTGCAAGACATGTCGTAGGTACTGGACCAAAGGCGGCACTCTTCGTAACATCCCTGTCGGTGGTGGCTGTCGAAAGAACAAGAAAGTTGCCACTACTAAGAAATCCAATGACCCACAACACCAACAGCCACAAAATCAACAACCCATCTCCCAAAATCACCACCAAGGCTCTTCTTCTTCTTCTGCCCATCACATTCACAACCCCACTGATCTCCATCTCTCATTTCCCGACCAAGTACAATTCCCTCATTTCAACCATCTCATTGGAACAACCCCAAGTTTCATGGACGCCAAATACACCATTGGAATGCTTGAAAGTCACCACCAACATCACACTACTCGACCCATTGATTTCATGGACACCAAAATGGACGCCATTGTTGGGAATGCTCATTACCCTACAAACCCTGATCACTTAGCCATGGTTGGTGGGCTAGCTGGAGATCACATCGCCGCCGCCGGGCATACTCTGTCGCCGAGTTTCCATGGCCTTTGCTCCCCTTATGGGCTGTCACTCGATGGGAACACCATTGGACAAGGACTGATGATTCCTTATGATCAGCATGAACCAAATGAGGAGCCAAATGCAATGGATGTGAAACCAAATACAAAGCTTCTGGCTTTGGAATGGCAAGATCAGGGATGTTCAGACAAAGTTGAATCGTATGGATACATAAATGGAATTGGGTCGTCTTGGAATGGGATGATGAATGGATATGGACCATCAACAACGAACCCATTGGTGTAAAATTTGATAGGGAAATGGTACACAAACCAAACGAAATCAACGTCTATTTGCCTTGGTTACTATAAGTAGTGTCCAAATGTGGGTATCATAATTAGTGCCTTTTTCTTGCTATCAGTTCCTTCAAAATGCGTCTGATTTTTGCTTTGGCCTTGGGATAGTGTCGCAAATCCAAGGCTCTCTCTTAGGATTTTCTTGTAATATTGAGGAACCTTATCTAAGGAGTGCTTTTGTGGTATAAACAAAAACAACCAAGTGTGATTTGGTGCCTAATTATTATTGTTATTTAAGTGCTAATTTTATTTAATTTGTTATGTCTAATAATTAATTAAGCTCGATAAAATTCGAGCATCGAAGTTAATGTGAACTTAGCTCAACTCATATAAAACGGACACTCTCGAATCTTCTAATGGTTATGCTATTAAGCTCTACCTAAAAAAGAAAAAACATGCAACAAATATTCCTCCATTGTATTGGAAGCCTCATGCATGACTTTTGGCTGTAAAATTGGAGACATTTGTATGTAAGAATATA

mRNA sequence

TTTGCTTTACCCTTCCTTGTGGGGTACCACCACCCTACACACAGTCTTGGGATGGGACCCACTTTGACATCATCTCTGCTGCTAACGCACTCCCTCCCTTCCGTCTCTTCAAATATACCCTTTTTTTCTTCCTTCTTATTCACATCCCCTTCTTATAAACAGAGGAACTGAAACAGAGGAACAATGGAGTGACTGTGAAGTGAAGTTTTTGTTTGGCTGTTGGAAACATCTTTTTCTTTCTGCTCTGTTCTTCATTCATATGGGTTTAACTTCTCTACAAGTCTGCATGGACTCCTCTGATTGGCTGCAGGGCACCATTAACGAGGAGTCTGGCATGGATTCTTCGTCGCTATCAGGGGACATGCTGTCATGTTCAAGGCCGCTGACAGAGAGGAGGCTTAGACCACCACATGATCAAGCACTGAAATGCCCAAGATGTGACTCAACGCACACCAAATTTTGCTACTACAACAATTACAGCCTCACCCAGCCGCGTTACTTTTGCAAGACATGTCGTAGGTACTGGACCAAAGGCGGCACTCTTCGTAACATCCCTGTCGGTGGTGGCTGTCGAAAGAACAAGAAAGTTGCCACTACTAAGAAATCCAATGACCCACAACACCAACAGCCACAAAATCAACAACCCATCTCCCAAAATCACCACCAAGGCTCTTCTTCTTCTTCTGCCCATCACATTCACAACCCCACTGATCTCCATCTCTCATTTCCCGACCAAGTACAATTCCCTCATTTCAACCATCTCATTGGAACAACCCCAAGTTTCATGGACGCCAAATACACCATTGGAATGCTTGAAAGTCACCACCAACATCACACTACTCGACCCATTGATTTCATGGACACCAAAATGGACGCCATTGTTGGGAATGCTCATTACCCTACAAACCCTGATCACTTAGCCATGGTTGGTGGGCTAGCTGGAGATCACATCGCCGCCGCCGGGCATACTCTGTCGCCGAGTTTCCATGGCCTTTGCTCCCCTTATGGGCTGTCACTCGATGGGAACACCATTGGACAAGGACTGATGATTCCTTATGATCAGCATGAACCAAATGAGGAGCCAAATGCAATGGATGTGAAACCAAATACAAAGCTTCTGGCTTTGGAATGGCAAGATCAGGGATGTTCAGACAAAGTTGAATCGTATGGATACATAAATGGAATTGGGTCGTCTTGGAATGGGATGATGAATGGATATGGACCATCAACAACGAACCCATTGGTGTAAAATTTGATAGGGAAATGGTACACAAACCAAACGAAATCAACGTCTATTTGCCTTGGTTACTATAAGTAGTGTCCAAATGTGGGTATCATAATTAGTGCCTTTTTCTTGCTATCAGTTCCTTCAAAATGCGTCTGATTTTTGCTTTGGCCTTGGGATAGTGTCGCAAATCCAAGGCTCTCTCTTAGGATTTTCTTGTAATATTGAGGAACCTTATCTAAGGAGTGCTTTTGTGGTATAAACAAAAACAACCAAGTGTGATTTGGTGCCTAATTATTATTGTTATTTAAGTGCTAATTTTATTTAATTTGTTATGTCTAATAATTAATTAAGCTCGATAAAATTCGAGCATCGAAGTTAATGTGAACTTAGCTCAACTCATATAAAACGGACACTCTCGAATCTTCTAATGGTTATGCTATTAAGCTCTACCTAAAAAAGAAAAAACATGCAACAAATATTCCTCCATTGTATTGGAAGCCTCATGCATGACTTTTGGCTGTAAAATTGGAGACATTTGTATGTAAGAATATA

Coding sequence (CDS)

ATGGGTTTAACTTCTCTACAAGTCTGCATGGACTCCTCTGATTGGCTGCAGGGCACCATTAACGAGGAGTCTGGCATGGATTCTTCGTCGCTATCAGGGGACATGCTGTCATGTTCAAGGCCGCTGACAGAGAGGAGGCTTAGACCACCACATGATCAAGCACTGAAATGCCCAAGATGTGACTCAACGCACACCAAATTTTGCTACTACAACAATTACAGCCTCACCCAGCCGCGTTACTTTTGCAAGACATGTCGTAGGTACTGGACCAAAGGCGGCACTCTTCGTAACATCCCTGTCGGTGGTGGCTGTCGAAAGAACAAGAAAGTTGCCACTACTAAGAAATCCAATGACCCACAACACCAACAGCCACAAAATCAACAACCCATCTCCCAAAATCACCACCAAGGCTCTTCTTCTTCTTCTGCCCATCACATTCACAACCCCACTGATCTCCATCTCTCATTTCCCGACCAAGTACAATTCCCTCATTTCAACCATCTCATTGGAACAACCCCAAGTTTCATGGACGCCAAATACACCATTGGAATGCTTGAAAGTCACCACCAACATCACACTACTCGACCCATTGATTTCATGGACACCAAAATGGACGCCATTGTTGGGAATGCTCATTACCCTACAAACCCTGATCACTTAGCCATGGTTGGTGGGCTAGCTGGAGATCACATCGCCGCCGCCGGGCATACTCTGTCGCCGAGTTTCCATGGCCTTTGCTCCCCTTATGGGCTGTCACTCGATGGGAACACCATTGGACAAGGACTGATGATTCCTTATGATCAGCATGAACCAAATGAGGAGCCAAATGCAATGGATGTGAAACCAAATACAAAGCTTCTGGCTTTGGAATGGCAAGATCAGGGATGTTCAGACAAAGTTGAATCGTATGGATACATAAATGGAATTGGGTCGTCTTGGAATGGGATGATGAATGGATATGGACCATCAACAACGAACCCATTGGTGTAA

Protein sequence

MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQHQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFMDAKYTIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAMVGGLAGDHIAAAGHTLSPSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQDQGCSDKVESYGYINGIGSSWNGMMNGYGPSTTNPLV

Homology

[Close]

BLAST of Cp4.1LG20g02280.1 vs. ExPASy Swiss-Prot
Match: Q9FM03 (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana OX=3702 GN=DOF5.6 PE=2 SV=2)

HSP 1 Score: 234.6 bits (597), Expect = 1.6e-60
Identity = 168/396 (42.42%), Postives = 211/396 (53.28%), Query Frame = 0


Query: 1   MGLTSLQVCMDSSDWLQ-----GTINEESGMDSSSLSGDMLSCS-RPLTE---------- 60
           MGLTSLQVCMD SDWLQ     G    +S  +S S +  + +CS RP             
Sbjct: 1   MGLTSLQVCMD-SDWLQESESSGGSMLDSSTNSPSAADILAACSTRPQASAVAVAAAALM 60

Query: 61  ---RRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVG 120
              RRLRPPHD   KCPRC+STHTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVG
Sbjct: 61  DGGRRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVG 120

Query: 121 GGCRKNKKVATTKKSNDPQH-QQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQV 180
           GGCRKNKK +++  S+     ++P N    + +     + S  ++ H+P          +
Sbjct: 121 GGCRKNKKPSSSNSSSSTSSGKKPSNIVTANTSDLMALAHSHQNYQHSP----------L 180

Query: 181 QFPHFNHLIG--TTP-----SFMDAKYTIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHY 240
            F HF  ++G  +TP      F+++KY  G+L       + RPIDF+D+K D +      
Sbjct: 181 GFSHFGGMMGSYSTPEHGNVGFLESKYG-GLLS-----QSPRPIDFLDSKFDLM------ 240

Query: 241 PTNPDHLAMVG-GLAGDHIAAAGHTLSPSFHGL--------CSPYGLSLDGNTIGQGLM- 300
             N D+L MV  G  GDH     H +  + HG+            G+S  GN  G GLM 
Sbjct: 241 GVNNDNLVMVNHGSNGDHHHHHNHHMGLN-HGVGLNNNNNNGGFNGISTGGNGNGGGLMD 300

Query: 301 ---------IPYDQHEPNEEPN------AMDVKPNTKLLALEWQDQGCSDK--------- 330
                      YD H  N + +       MDVKPN KLL+L+WQ   C            
Sbjct: 301 ISTCQRLMLSNYDHHHYNHQEDHQRVATIMDVKPNPKLLSLDWQQDQCYSNGGGSGGAGK 360

[Close]

BLAST of Cp4.1LG20g02280.1 vs. ExPASy Swiss-Prot
Match: Q9SXG8 (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.2e-28
Identity = 69/136 (50.74%), Postives = 86/136 (63.24%), Query Frame = 0


Query: 43  TERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGG 102
           TERR RP  ++AL CPRC+ST+TKFCYYNNYSL QPRYFCKTCRRYWT+GG+LRN+PVGG
Sbjct: 66  TERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGG 125

Query: 103 GCRKNKKVATTKKSNDPQHQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPD-QVQ 162
           G RKNK+ +++  S  P      N    S +     +S+      NP  +H    D  + 
Sbjct: 126 GSRKNKRSSSSAASASPASASTANSVVTSASMSMSMASTGGGASKNPKLVHEGAQDLNLA 185

Query: 163 FPHFNHL--IGTTPSF 176
           FPH   L   G  P+F
Sbjct: 186 FPHHGGLQAPGEFPAF 201

[Close]

BLAST of Cp4.1LG20g02280.1 vs. ExPASy Swiss-Prot
Match: Q8LAP8 (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 1.1e-27
Identity = 61/101 (60.40%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 44  ERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGG 103
           ER+ RP  DQA+ CPRC+ST+TKFCYYNNYSLTQPRYFCK CRRYWT+GG+LRNIPVGGG
Sbjct: 42  ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101

Query: 104 CRKNKKVATTK---KSNDPQHQQPQNQQPISQNHHQGSSSS 142
            RKNK+  ++     +N     QP  ++ +S +HH   S S
Sbjct: 102 SRKNKRSHSSSSDISNNHSDSTQPATKKHLSDHHHHLMSMS 142

[Close]

BLAST of Cp4.1LG20g02280.1 vs. ExPASy Swiss-Prot
Match: Q84JQ8 (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 9.0e-27
Identity = 57/92 (61.96%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 44  ERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGG 103
           ER+ RP  DQAL CPRC+S +TKFCYYNNYSLTQPRYFCK CRRYWT GG+LRNIPVGGG
Sbjct: 38  ERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGG 97

Query: 104 CRKNKKVATTKKSNDPQHQQPQNQQPISQNHH 136
            RKNK+ ++   S+ P      +++P+  N++
Sbjct: 98  VRKNKRSSSNSSSSSPS-SSSSSKKPLFANNN 128

[Close]

BLAST of Cp4.1LG20g02280.1 vs. ExPASy Swiss-Prot
Match: Q9M1E6 (Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana OX=3702 GN=DOF3.2 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 9.0e-27
Identity = 56/89 (62.92%), Postives = 71/89 (79.78%), Query Frame = 0


Query: 28  SSSLSGDMLSCSRPLTERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRR 87
           SS  + D  +  +PL+  R  PP +Q+L+CPRCDST+TKFCYYNNYSL+QPRYFCK+CRR
Sbjct: 14  SSCSTQDYQNQKKPLSATRPAPP-EQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRR 73

Query: 88  YWTKGGTLRNIPVGGGCRKNKKVATTKKS 117
           YWTKGG LRNIP+GG  RK+K+ ++  KS
Sbjct: 74  YWTKGGILRNIPIGGAYRKHKRSSSATKS 101

[Close]

BLAST of Cp4.1LG20g02280.1 vs. NCBI nr
Match: XP_022923989.1 (dof zinc finger protein DOF5.6 [Cucurbita moschata] >XP_023519146.1 dof zinc finger protein DOF5.6-like [Cucurbita pepo subsp. pepo] >KAG6584221.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 692 bits (1787), Expect = 5.33e-252
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0


Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60
           MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC
Sbjct: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60

Query: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120
           DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ
Sbjct: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120

Query: 121 HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFMDAKY 180
           HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFMDAKY
Sbjct: 121 HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFMDAKY 180

Query: 181 TIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAMVGGLAGDHIAAAGHTLSP 240
           TIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAMVGGLAGDHIAAAGHTLSP
Sbjct: 181 TIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAMVGGLAGDHIAAAGHTLSP 240

Query: 241 SFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQDQGCSDKV 300
           SFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQDQGCSDKV
Sbjct: 241 SFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQDQGCSDKV 300

Query: 301 ESYGYINGIGSSWNGMMNGYGPSTTNPLV 329
           ESYGYINGIGSSWNGMMNGYGPSTTNPLV
Sbjct: 301 ESYGYINGIGSSWNGMMNGYGPSTTNPLV 329

[Close]

BLAST of Cp4.1LG20g02280.1 vs. NCBI nr
Match: XP_023000697.1 (dof zinc finger protein DOF5.6-like [Cucurbita maxima])

HSP 1 Score: 688 bits (1775), Expect = 3.74e-250
Identity = 329/330 (99.70%), Postives = 329/330 (99.70%), Query Frame = 0


Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60
           MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC
Sbjct: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60

Query: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120
           DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ
Sbjct: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120

Query: 121 HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFMDAKY 180
           HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFMDAKY
Sbjct: 121 HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFMDAKY 180

Query: 181 TIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAMVGGLAGDHIAAA-GHTLS 240
           TIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAMVGGLAGDHIAAA GHTLS
Sbjct: 181 TIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAMVGGLAGDHIAAAAGHTLS 240

Query: 241 PSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQDQGCSDK 300
           PSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQDQGCSDK
Sbjct: 241 PSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQDQGCSDK 300

Query: 301 VESYGYINGIGSSWNGMMNGYGPSTTNPLV 329
           VESYGYINGIGSSWNGMMNGYGPSTTNPLV
Sbjct: 301 VESYGYINGIGSSWNGMMNGYGPSTTNPLV 330

[Close]

BLAST of Cp4.1LG20g02280.1 vs. NCBI nr
Match: KAG7019819.1 (Dof zinc finger protein DOF5.6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 687 bits (1772), Expect = 6.26e-249
Identity = 329/333 (98.80%), Postives = 329/333 (98.80%), Query Frame = 0


Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60
           MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC
Sbjct: 45  MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 104

Query: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120
           DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ
Sbjct: 105 DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 164

Query: 121 HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFMDAKY 180
           HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFMDAKY
Sbjct: 165 HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFMDAKY 224

Query: 181 TIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAMVGGLAGDHIAAA----GH 240
           TIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAMVGGLAGDHIAAA    GH
Sbjct: 225 TIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAMVGGLAGDHIAAAAAAAGH 284

Query: 241 TLSPSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQDQGC 300
           TLSPSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQDQGC
Sbjct: 285 TLSPSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQDQGC 344

Query: 301 SDKVESYGYINGIGSSWNGMMNGYGPSTTNPLV 329
           SDKVESYGYINGIGSSWNGMMNGYGPSTTNPLV
Sbjct: 345 SDKVESYGYINGIGSSWNGMMNGYGPSTTNPLV 377

[Close]

BLAST of Cp4.1LG20g02280.1 vs. NCBI nr
Match: XP_038893900.1 (dof zinc finger protein DOF5.6 [Benincasa hispida])

HSP 1 Score: 562 bits (1448), Expect = 2.23e-200
Identity = 285/337 (84.57%), Postives = 299/337 (88.72%), Query Frame = 0


Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60
           MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRP HDQALKCPRC
Sbjct: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPQHDQALKCPRC 60

Query: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120
           DSTHTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV+TTKKSND Q
Sbjct: 61  DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSTTKKSNDQQ 120

Query: 121 HQQPQNQQPISQNHH----QGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFM 180
            QQPQ QQPISQNHH      SSSSS+ HIHNPTDLHLSFPDQVQFPHFN LIG +P+F 
Sbjct: 121 QQQPQIQQPISQNHHLLHGPSSSSSSSLHIHNPTDLHLSFPDQVQFPHFNPLIGNSPNF- 180

Query: 181 DAKYTIGMLESHHQHH-TTRPIDFMDTKMDAIVGN-AHYPTNPDHLAMVGGLAGDH--IA 240
               TIGMLE+HH HH  TRPIDFMDTKM+AIVGN  HY TNPDHLAM+GGL GDH  I 
Sbjct: 181 ----TIGMLETHHHHHHQTRPIDFMDTKMEAIVGNNGHYSTNPDHLAMIGGLNGDHHHIT 240

Query: 241 AAGHTLSPSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQ 300
           AA    + +FHG+CSPYGLSLDGN I Q +MIPYDQH+ NE+PN MDVKPNTKLLALEWQ
Sbjct: 241 AA----ATNFHGICSPYGLSLDGN-INQ-MMIPYDQHQTNEDPNGMDVKPNTKLLALEWQ 300

Query: 301 DQGCSDKVESYGYINGIGSSWNGMMNGYGPSTTNPLV 329
           DQGCSDKVESYGYINGIGSSWNGMMNGYGPSTTNPLV
Sbjct: 301 DQGCSDKVESYGYINGIGSSWNGMMNGYGPSTTNPLV 326

[Close]

BLAST of Cp4.1LG20g02280.1 vs. NCBI nr
Match: XP_004152476.1 (dof zinc finger protein DOF5.6 [Cucumis sativus] >KAE8652587.1 hypothetical protein Csa_013847 [Cucumis sativus])

HSP 1 Score: 548 bits (1411), Expect = 1.25e-194
Identity = 281/342 (82.16%), Postives = 295/342 (86.26%), Query Frame = 0


Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60
           MGLTSLQVCMDSSDWLQGT+NEESGMDSSSLSGDMLSCSRPLTERRLRP HDQALKCPRC
Sbjct: 1   MGLTSLQVCMDSSDWLQGTMNEESGMDSSSLSGDMLSCSRPLTERRLRPQHDQALKCPRC 60

Query: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120
           DSTHTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV+TTKKSND Q
Sbjct: 61  DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSTTKKSNDSQ 120

Query: 121 HQQ--PQNQQPISQNHH-----QGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTP 180
            QQ  PQ QQPISQNHH       SSSSS HHIHNPTDLHLSFPDQ+QFPHFN L   TP
Sbjct: 121 QQQQQPQIQQPISQNHHLLHGPSSSSSSSLHHIHNPTDLHLSFPDQIQFPHFNPL---TP 180

Query: 181 SFMDAKYTIGMLESHHQHHT-TRPIDFMDTKMDAIVGNA--HYPTNPDHLAMVGGLAGDH 240
           +F     TIGMLE+HH HH  TRPIDFMDTKM+AIVGN   HY TN DHLAMVGGL  DH
Sbjct: 181 NF-----TIGMLETHHHHHQQTRPIDFMDTKMEAIVGNNGHHYTTNTDHLAMVGGLTSDH 240

Query: 241 --IAAAGHTLSPSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLA 300
              AAA    + +FHG+CSPYGLSLDGN I Q +MIPYDQH+ NE+PN MDVKPNTKLLA
Sbjct: 241 HITAAAAAAAATNFHGICSPYGLSLDGNNINQ-MMIPYDQHQQNEDPNGMDVKPNTKLLA 300

Query: 301 LEWQDQG-CSDKVESYGYINGIGSSWNGMMNGYGPSTTNPLV 329
           LEWQDQG CS+KVESYGYINGIGSSWNGMMNGYGPSTTNPLV
Sbjct: 301 LEWQDQGGCSEKVESYGYINGIGSSWNGMMNGYGPSTTNPLV 333

[Close]

BLAST of Cp4.1LG20g02280.1 vs. ExPASy TrEMBL
Match: A0A6J1E7W5 (dof zinc finger protein DOF5.6 OS=Cucurbita moschata OX=3662 GN=LOC111431542 PE=4 SV=1)

HSP 1 Score: 692 bits (1787), Expect = 2.58e-252
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0


Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60
           MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC
Sbjct: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60

Query: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120
           DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ
Sbjct: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120

Query: 121 HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFMDAKY 180
           HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFMDAKY
Sbjct: 121 HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFMDAKY 180

Query: 181 TIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAMVGGLAGDHIAAAGHTLSP 240
           TIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAMVGGLAGDHIAAAGHTLSP
Sbjct: 181 TIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAMVGGLAGDHIAAAGHTLSP 240

Query: 241 SFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQDQGCSDKV 300
           SFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQDQGCSDKV
Sbjct: 241 SFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQDQGCSDKV 300

Query: 301 ESYGYINGIGSSWNGMMNGYGPSTTNPLV 329
           ESYGYINGIGSSWNGMMNGYGPSTTNPLV
Sbjct: 301 ESYGYINGIGSSWNGMMNGYGPSTTNPLV 329

[Close]

BLAST of Cp4.1LG20g02280.1 vs. ExPASy TrEMBL
Match: A0A6J1KED8 (dof zinc finger protein DOF5.6-like OS=Cucurbita maxima OX=3661 GN=LOC111495059 PE=4 SV=1)

HSP 1 Score: 688 bits (1775), Expect = 1.81e-250
Identity = 329/330 (99.70%), Postives = 329/330 (99.70%), Query Frame = 0


Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60
           MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC
Sbjct: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60

Query: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120
           DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ
Sbjct: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120

Query: 121 HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFMDAKY 180
           HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFMDAKY
Sbjct: 121 HQQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTPSFMDAKY 180

Query: 181 TIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAMVGGLAGDHIAAA-GHTLS 240
           TIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAMVGGLAGDHIAAA GHTLS
Sbjct: 181 TIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHYPTNPDHLAMVGGLAGDHIAAAAGHTLS 240

Query: 241 PSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQDQGCSDK 300
           PSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQDQGCSDK
Sbjct: 241 PSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQDQGCSDK 300

Query: 301 VESYGYINGIGSSWNGMMNGYGPSTTNPLV 329
           VESYGYINGIGSSWNGMMNGYGPSTTNPLV
Sbjct: 301 VESYGYINGIGSSWNGMMNGYGPSTTNPLV 330

[Close]

BLAST of Cp4.1LG20g02280.1 vs. ExPASy TrEMBL
Match: A0A5A7UKX0 (Dof zinc finger protein DOF5.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00690 PE=4 SV=1)

HSP 1 Score: 547 bits (1410), Expect = 8.88e-195
Identity = 281/343 (81.92%), Postives = 295/343 (86.01%), Query Frame = 0


Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60
           MGLTSLQVCMDSSDWLQGT+NEESGMDSSSLSGDMLSCSRPLTERRLRP HDQALKCPRC
Sbjct: 1   MGLTSLQVCMDSSDWLQGTMNEESGMDSSSLSGDMLSCSRPLTERRLRPQHDQALKCPRC 60

Query: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120
           DSTHTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV+TTKKSND Q
Sbjct: 61  DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSTTKKSNDSQ 120

Query: 121 HQQ--PQNQQPISQNHH-----QGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTP 180
            QQ  PQ QQPISQNHH       SSSSS HHIHNPTDLHLSFPDQ+QFPHFN L   TP
Sbjct: 121 QQQQQPQIQQPISQNHHLLHGPSSSSSSSLHHIHNPTDLHLSFPDQIQFPHFNPL---TP 180

Query: 181 SFMDAKYTIGMLESHHQHH--TTRPIDFMDTKMDAIVGNA--HYPTNPDHLAMVGGLAGD 240
           +F     TIGMLE+HH HH   TRPIDFMDTKM+AIVGN   HY TN DHLAMVGGL  D
Sbjct: 181 NF-----TIGMLETHHHHHHQQTRPIDFMDTKMEAIVGNNGHHYTTNTDHLAMVGGLTSD 240

Query: 241 H--IAAAGHTLSPSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLL 300
           H   AAA    + +FHG+CSPYGLSLDGN I Q +MIPYDQH+ NE+PN MDVKPNTKLL
Sbjct: 241 HHITAAAAAAAATNFHGICSPYGLSLDGNNINQ-MMIPYDQHQQNEDPNGMDVKPNTKLL 300

Query: 301 ALEWQDQG-CSDKVESYGYINGIGSSWNGMMNGYGPSTTNPLV 329
           ALEWQDQG CS+KVESYGYINGIGSSWNGMMNGYGPSTTNPLV
Sbjct: 301 ALEWQDQGGCSEKVESYGYINGIGSSWNGMMNGYGPSTTNPLV 334

[Close]

BLAST of Cp4.1LG20g02280.1 vs. ExPASy TrEMBL
Match: A0A1S3AWZ0 (dof zinc finger protein DOF5.6 OS=Cucumis melo OX=3656 GN=LOC103483519 PE=4 SV=1)

HSP 1 Score: 547 bits (1410), Expect = 8.88e-195
Identity = 281/343 (81.92%), Postives = 295/343 (86.01%), Query Frame = 0


Query: 1   MGLTSLQVCMDSSDWLQGTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPRC 60
           MGLTSLQVCMDSSDWLQGT+NEESGMDSSSLSGDMLSCSRPLTERRLRP HDQALKCPRC
Sbjct: 1   MGLTSLQVCMDSSDWLQGTMNEESGMDSSSLSGDMLSCSRPLTERRLRPQHDQALKCPRC 60

Query: 61  DSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSNDPQ 120
           DSTHTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV+TTKKSND Q
Sbjct: 61  DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSTTKKSNDSQ 120

Query: 121 HQQ--PQNQQPISQNHH-----QGSSSSSAHHIHNPTDLHLSFPDQVQFPHFNHLIGTTP 180
            QQ  PQ QQPISQNHH       SSSSS HHIHNPTDLHLSFPDQ+QFPHFN L   TP
Sbjct: 121 QQQQQPQIQQPISQNHHLLHGPSSSSSSSLHHIHNPTDLHLSFPDQIQFPHFNPL---TP 180

Query: 181 SFMDAKYTIGMLESHHQHH--TTRPIDFMDTKMDAIVGNA--HYPTNPDHLAMVGGLAGD 240
           +F     TIGMLE+HH HH   TRPIDFMDTKM+AIVGN   HY TN DHLAMVGGL  D
Sbjct: 181 NF-----TIGMLETHHHHHHQQTRPIDFMDTKMEAIVGNNGHHYTTNTDHLAMVGGLTSD 240

Query: 241 H--IAAAGHTLSPSFHGLCSPYGLSLDGNTIGQGLMIPYDQHEPNEEPNAMDVKPNTKLL 300
           H   AAA    + +FHG+CSPYGLSLDGN I Q +MIPYDQH+ NE+PN MDVKPNTKLL
Sbjct: 241 HHITAAAAAAAATNFHGICSPYGLSLDGNNINQ-MMIPYDQHQQNEDPNGMDVKPNTKLL 300

Query: 301 ALEWQDQG-CSDKVESYGYINGIGSSWNGMMNGYGPSTTNPLV 329
           ALEWQDQG CS+KVESYGYINGIGSSWNGMMNGYGPSTTNPLV
Sbjct: 301 ALEWQDQGGCSEKVESYGYINGIGSSWNGMMNGYGPSTTNPLV 334

[Close]

BLAST of Cp4.1LG20g02280.1 vs. ExPASy TrEMBL
Match: A0A6J1K5Q8 (dof zinc finger protein DOF5.6-like OS=Cucurbita maxima OX=3661 GN=LOC111490291 PE=4 SV=1)

HSP 1 Score: 530 bits (1364), Expect = 8.06e-188
Identity = 278/338 (82.25%), Postives = 299/338 (88.46%), Query Frame = 0


Query: 1   MGLTSLQVCMDSSDWLQ-GTINEESGMDSSSLSGDMLSCSRPLTERRLRPPHDQALKCPR 60
           MGLTSLQVCMDSSDWLQ G+ NEESGMD SSLSGDMLSCSRPLTERRLRP HDQALKCPR
Sbjct: 1   MGLTSLQVCMDSSDWLQQGSGNEESGMDCSSLSGDMLSCSRPLTERRLRPQHDQALKCPR 60

Query: 61  CDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVATTKKSN-D 120
           CDSTHTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV TTKKSN D
Sbjct: 61  CDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVTTTKKSNND 120

Query: 121 P-QHQQPQNQQPISQ-NHHQGSSSSSAHHIHNPTDLHLSFPDQVQFP-HFNHLIGTTPSF 180
           P  HQQ Q +QPISQ +HH  +SSSS+ H HNPTDLHLSF +QV FP  FN LIGT P+F
Sbjct: 121 PIHHQQQQPRQPISQIHHHHIASSSSSLHNHNPTDLHLSFSNQVHFPSQFNPLIGT-PNF 180

Query: 181 MDAKYTIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHY-PTNPDHLAMVGGLAGDHIAAA 240
           + +   IGMLE+HH  HT RPIDFMD+KM+A+VGNAHY PTN DHLAMVGG AGDHIAAA
Sbjct: 181 ISS---IGMLEAHH--HTARPIDFMDSKMEALVGNAHYNPTNSDHLAMVGGFAGDHIAAA 240

Query: 241 GHTLSPSFHGLCSPYGLSLDGNT--IGQGLMIPYDQHEPNEEPNAMDVKPNTKLLALEWQ 300
           GH LSPSFHGLCSPYGLSLDGN   +GQG+MIPY+ HE NE+PNAM+VKPNTKLLALEWQ
Sbjct: 241 GHALSPSFHGLCSPYGLSLDGNAAGMGQGVMIPYE-HEQNEDPNAMEVKPNTKLLALEWQ 300

Query: 301 DQ-GCSDKVESYGYINGIGSSWNGMMNGYGPSTTNPLV 329
           DQ GCS+KVESYG+INGIGSSWNGMMNGYG STTNPLV
Sbjct: 301 DQEGCSEKVESYGFINGIGSSWNGMMNGYGSSTTNPLV 331

[Close]

BLAST of Cp4.1LG20g02280.1 vs. TAIR 10
Match: AT5G62940.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 234.6 bits (597), Expect = 1.2e-61
Identity = 168/396 (42.42%), Postives = 211/396 (53.28%), Query Frame = 0


Query: 1   MGLTSLQVCMDSSDWLQ-----GTINEESGMDSSSLSGDMLSCS-RPLTE---------- 60
           MGLTSLQVCMD SDWLQ     G    +S  +S S +  + +CS RP             
Sbjct: 1   MGLTSLQVCMD-SDWLQESESSGGSMLDSSTNSPSAADILAACSTRPQASAVAVAAAALM 60

Query: 61  ---RRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVG 120
              RRLRPPHD   KCPRC+STHTKFCYYNNYSL+QPRYFCKTCRRYWTKGGTLRNIPVG
Sbjct: 61  DGGRRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVG 120

Query: 121 GGCRKNKKVATTKKSNDPQH-QQPQNQQPISQNHHQGSSSSSAHHIHNPTDLHLSFPDQV 180
           GGCRKNKK +++  S+     ++P N    + +     + S  ++ H+P          +
Sbjct: 121 GGCRKNKKPSSSNSSSSTSSGKKPSNIVTANTSDLMALAHSHQNYQHSP----------L 180

Query: 181 QFPHFNHLIG--TTP-----SFMDAKYTIGMLESHHQHHTTRPIDFMDTKMDAIVGNAHY 240
            F HF  ++G  +TP      F+++KY  G+L       + RPIDF+D+K D +      
Sbjct: 181 GFSHFGGMMGSYSTPEHGNVGFLESKYG-GLLS-----QSPRPIDFLDSKFDLM------ 240

Query: 241 PTNPDHLAMVG-GLAGDHIAAAGHTLSPSFHGL--------CSPYGLSLDGNTIGQGLM- 300
             N D+L MV  G  GDH     H +  + HG+            G+S  GN  G GLM 
Sbjct: 241 GVNNDNLVMVNHGSNGDHHHHHNHHMGLN-HGVGLNNNNNNGGFNGISTGGNGNGGGLMD 300

Query: 301 ---------IPYDQHEPNEEPN------AMDVKPNTKLLALEWQDQGCSDK--------- 330
                      YD H  N + +       MDVKPN KLL+L+WQ   C            
Sbjct: 301 ISTCQRLMLSNYDHHHYNHQEDHQRVATIMDVKPNPKLLSLDWQQDQCYSNGGGSGGAGK 360

[Close]

BLAST of Cp4.1LG20g02280.1 vs. TAIR 10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 125.6 bits (314), Expect = 7.6e-29
Identity = 61/101 (60.40%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 44  ERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGG 103
           ER+ RP  DQA+ CPRC+ST+TKFCYYNNYSLTQPRYFCK CRRYWT+GG+LRNIPVGGG
Sbjct: 42  ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101

Query: 104 CRKNKKVATTK---KSNDPQHQQPQNQQPISQNHHQGSSSS 142
            RKNK+  ++     +N     QP  ++ +S +HH   S S
Sbjct: 102 SRKNKRSHSSSSDISNNHSDSTQPATKKHLSDHHHHLMSMS 142

[Close]

BLAST of Cp4.1LG20g02280.1 vs. TAIR 10
Match: AT1G64620.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 122.5 bits (306), Expect = 6.4e-28
Identity = 57/92 (61.96%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 44  ERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGG 103
           ER+ RP  DQAL CPRC+S +TKFCYYNNYSLTQPRYFCK CRRYWT GG+LRNIPVGGG
Sbjct: 38  ERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGG 97

Query: 104 CRKNKKVATTKKSNDPQHQQPQNQQPISQNHH 136
            RKNK+ ++   S+ P      +++P+  N++
Sbjct: 98  VRKNKRSSSNSSSSSPS-SSSSSKKPLFANNN 128

[Close]

BLAST of Cp4.1LG20g02280.1 vs. TAIR 10
Match: AT3G45610.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 122.5 bits (306), Expect = 6.4e-28
Identity = 56/89 (62.92%), Postives = 71/89 (79.78%), Query Frame = 0


Query: 28  SSSLSGDMLSCSRPLTERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRR 87
           SS  + D  +  +PL+  R  PP +Q+L+CPRCDST+TKFCYYNNYSL+QPRYFCK+CRR
Sbjct: 14  SSCSTQDYQNQKKPLSATRPAPP-EQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRR 73

Query: 88  YWTKGGTLRNIPVGGGCRKNKKVATTKKS 117
           YWTKGG LRNIP+GG  RK+K+ ++  KS
Sbjct: 74  YWTKGGILRNIPIGGAYRKHKRSSSATKS 101

[Close]

BLAST of Cp4.1LG20g02280.1 vs. TAIR 10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6 )

HSP 1 Score: 117.5 bits (293), Expect = 2.1e-26
Identity = 80/181 (44.20%), Postives = 99/181 (54.70%), Query Frame = 0


Query: 22  EESGMDSSS----LSGDMLSCSRPLTERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQ 81
           E  G+  SS    L  D    S      R +PP + AL+CPRCDST+TKFCYYNNYSLTQ
Sbjct: 19  EAMGLSYSSNPTPLDNDQKKPSPATAVTRPQPP-ELALRCPRCDSTNTKFCYYNNYSLTQ 78

Query: 82  PRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKK--------VATTKK--SNDPQHQQPQNQ 141
           PRYFCK+CRRYWTKGGTLRNIPVGGGCRKNK+        + TT +  S+D +       
Sbjct: 79  PRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEPASHDGKVFSAAGF 138

Query: 142 QPISQNHHQGSSSSSA--HHIHNPTDLHLSFPDQVQFPH---FNHLIGTTPSFMDAKYTI 184
              S N H   S + A  +  H  +   L F  ++   H      + GT+    +A Y  
Sbjct: 139 NGYSNNEHIDLSLAFALLNKQHPGSSSQLGFHSELGSSHQSDMEGMFGTSQQKENATYAF 198

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g02280.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FM03	1.6e-60	42.42	Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana OX=3702 GN=DOF5.6 PE=2 SV...	[more]
Q9SXG8	2.2e-28	50.74	Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 ...	[more]
Q8LAP8	1.1e-27	60.40	Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV...	[more]
Q84JQ8	9.0e-27	61.96	Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV...	[more]
Q9M1E6	9.0e-27	62.92	Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana OX=3702 GN=DOF3.2 PE=1 SV...	[more]

BLAST of Cp4.1LG20g02280.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923989.1	5.33e-252	100.00	dof zinc finger protein DOF5.6 [Cucurbita moschata] >XP_023519146.1 dof zinc fin...	[more]
XP_023000697.1	3.74e-250	99.70	dof zinc finger protein DOF5.6-like [Cucurbita maxima]	[more]
KAG7019819.1	6.26e-249	98.80	Dof zinc finger protein DOF5.6, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_038893900.1	2.23e-200	84.57	dof zinc finger protein DOF5.6 [Benincasa hispida]	[more]
XP_004152476.1	1.25e-194	82.16	dof zinc finger protein DOF5.6 [Cucumis sativus] >KAE8652587.1 hypothetical prot...	[more]

BLAST of Cp4.1LG20g02280.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E7W5	2.58e-252	100.00	dof zinc finger protein DOF5.6 OS=Cucurbita moschata OX=3662 GN=LOC111431542 PE=...	[more]
A0A6J1KED8	1.81e-250	99.70	dof zinc finger protein DOF5.6-like OS=Cucurbita maxima OX=3661 GN=LOC111495059 ...	[more]
A0A5A7UKX0	8.88e-195	81.92	Dof zinc finger protein DOF5.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3AWZ0	8.88e-195	81.92	dof zinc finger protein DOF5.6 OS=Cucumis melo OX=3656 GN=LOC103483519 PE=4 SV=1	[more]
A0A6J1K5Q8	8.06e-188	82.25	dof zinc finger protein DOF5.6-like OS=Cucurbita maxima OX=3661 GN=LOC111490291 ...	[more]

BLAST of Cp4.1LG20g02280.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62940.1	1.2e-61	42.42	Dof-type zinc finger DNA-binding family protein	[more]
AT4G24060.1	7.6e-29	60.40	Dof-type zinc finger DNA-binding family protein	[more]
AT1G64620.1	6.4e-28	61.96	Dof-type zinc finger DNA-binding family protein	[more]
AT3G45610.1	6.4e-28	62.92	Dof-type zinc finger DNA-binding family protein	[more]
AT5G60200.1	2.1e-26	44.20	TARGET OF MONOPTEROS 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 52..109 e-value: 3.2E-33 score: 113.7
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 57..93
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 55..109 score: 29.124189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..148
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 11..323
None	No IPR available	PANTHER	PTHR31992:SF158	SUBFAMILY NOT NAMED	coord: 11..323

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG20g02280	Cp4.1LG20g02280	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g02280.1:five_prime_utr:001	Cp4.1LG20g02280.1:five_prime_utr:001	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g02280.1:exon:001	Cp4.1LG20g02280.1:exon:001	exon
Cp4.1LG20g02280.1:exon:002	Cp4.1LG20g02280.1:exon:002	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g02280.1:cds:001	Cp4.1LG20g02280.1:cds:001	CDS
Cp4.1LG20g02280.1:cds:002	Cp4.1LG20g02280.1:cds:002	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g02280.1:three_prime_utr:001	Cp4.1LG20g02280.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g02280.1	Cp4.1LG20g02280.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding