Cp4.1LG18g03510.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g03510.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Translation machinery-associated protein 22
Location	Cp4.1LG18: 4933294 .. 4938392 (+)
Sequence length	1000
RNA-Seq Expression	Cp4.1LG18g03510.1
Synteny	Cp4.1LG18g03510.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAACATTCCAACGCAATACATTCACCGTTCATCGCCTCTCGAATCTCATTCTTAGGCTACAAAGCAAAAGAGAGCGGAAACTAATTGTCTTTCGCACCAAAAAGGGGGCGGAGAGACTGTGCTTGAGGAGCTCTAATGGCGGACAAACCCCAGCCGGTGCGCGTTTTGTACTGTCCGGTCTGCAGTTTGCCGGCGGAGTATTGCGAATTCGGACCCGATTTCGAAAAATGCAAGCCCTGGTTGATCCAAAATGCTCCCGACCTCTATCCCGATCTTCTCAAAGGTCCTTCGCACTCCCAAACCCTAATCGCAAGTGTTACTCCAAATCCGATTTTGTTAACTAATATTTCTTTGTCTGTTTATTTGTCTCTGTAGAGGCCAATGCGAAGGAAGCTGGTGAAGTTTCTAATAAACTGCAATCGACCAGTATCTCATCTGCTGCTGGTGATGGAGCTACTTCTTCAGGTTAACTTTTCGATTTTATTTATGTGCGCGCGCGTGTTTGCATCTATATGTGCATAGTTATTTTTGTTTTTGTTTTGTTGTAATTACCTGCTAGGTTCACTTGAAGATATTGAAAGCTACCGACCACAATGTTAATGTTCGCTTTATGATTTTGATTTTTTTCGTGAAATTTCACCTCGCTAATTCTACTTAGTTAACTAAGAGGCCTCATCGGGTAGTGGACACTCAATTTCCTCTGCAGTGTTGGGTTTTGGCGGTAATTTTGCACGTTTGAGACCTTGGCCATTGAATTATCTTTTCCATGTTTTGGTCATGTGTGGAAAGATGGAAATAAAATGATTATCATTTCGGGTACTTTGTGGAAGTCCTTATGTACGATTGGTCTGCCAAAGAGTTTTTGGGATCAATTCAATTGTTTGAGCTTGAGCGGACTTAACTTTGTGATCCTTTCATAGACTTGTCCTGATGTACCTACTTAGAGTTAGCGTTTCTAATATTGGATCTTTGCAGATTGTTGGAAATAGAACATTTGTAATGAGTATATGTATAGTTAATTGATCCCAAAATATATGGTTTTATCTAGTTAGTCAAATTTCTTTTATTTCAAAGACATTGCAGCAAGTAATCCCATTAATTTTTCCCCATTTTGCCAATTGGTTCACTTACCCCTATTCTCAAGGTAACATTTGATTTGGTTATCTGACATCTTCTGACTGTATGGTATTTTATCTGACGTTGGCTTCTCCATAATAATTTTATATTTGTTTGGTCTCAACCTATGACTTATAGCTCTAGTCACTCTTTTCTCTTTTGGTGGAGAAATACAGCGCCTAAGCAAGAGGAAGTGAAACGTCTTCCTGGTGGCAAGATAAAGAAAAAAGTAATTTAGTTATTAAACTCAGTTCTGCTGTCACTCTTCAATAAGACGTTGACGGGATGGATCTAATTAGTTGGATGTTCATGTAGGAGAGGCAAGAAGTTATCATTGAGAAGGTTACTCGCAATAAGAGAAAGTGCATTACAACTGTAAAAGGGTTAGACCTTTTTGGTGAGCAATACTTTGTTTTCTATCCCTACTTGACATTTCTATTGTTACATTAATTTTCAATAACAGTGTCTGTAACTGTTTTTAGGAGTTAAACTAAGTGATGCTTCAAAGAAACTTGGAAAGAAGTTTGCTACTGGGGCCTCTGTGGTTAAGGTTATTCACTTCTGGTGTCATGACTCAAGTGTCTTTCTACTGTTGATGCTTCTTGATATCTTATCGTCTGCTTAATGCTTGGTTTTAGGGGCCAACTGAGAAAGAGCAAATTGATGTTCAAGGGGACATATCTTATGACATTGTGGATTTCATCACCGAGACTTGGCGTGATGTAAGATACTTATCCTTATTAATTTTTTAGGGATAAAAGAATAAACCAGCCCCCCATTCATCTGAACTCTATACATCACTGTACTTGAATAGGGTTAATGATTTCTAGTATGAGCAGCTCATAAATTATACCATATCGTTGGTTTTAATAAACGTTGACACTTTCAACTTCTGGTGATATAAATAAGGTTGGCACTATTTGTTTTTCTGTAAAGGGTCTACGTGTTCAATTATATTTCTCCATTATCAAGTGATTCTAAAATCGTAACAATTTTGTGATTAACACTCCCATCTCTCAATAGGCCCATCCTCCACTGTGATGTTATGCTTGTCTTGTTCTCCCACCCTCTCTCTCTCTAAAATTTTGCTGGATCTTGGCATCAATTAAGCATTTGAAGTTGGTGTCAGTTTGTGAATGGGTAGTCTCCTTCCTCAACCCTCTTTAAGAATTGGTTGAGTGGATTGGGACTATAAATATTAGCAGTTTGGTCCTTTTAGACTCTAGTATGACACGTTCCCATCGCATTGGACAAAATCTTTGTCTAAGCTTTAAGTTTTAATCTTTAACTTTGCTTTTATTATTTTCATAATCCTGTCAAATTCATTGACTTAATTCTTACCCCTCTGCTTTCTGATTTGTAGTTGTCCATGTTCTTATGATCTACTACCTGTTTTGGGGTTCACTACCTACATTTTTTATTTCATAAATTTTAACGACAACTTTTAGAAATAAATCTCAAAATTTTCATGGATGGTCACACATACTTATGCATGTGATGGAGGAGAGGAATAATAGGAAATTGAGAGGGGTTAGGAGGGGCTCTTGTGATGTCTTGTCCCTCGTTAGGTTTTATGTTCCTCTTTAGGTGTCGATGACGAAGTCTTTTTGTCATTACTCTTTAGGTCTCATTTTACTTGCTTGGAGCCCAGTTCTTTAGCTGGACTGTTGCACCACATCCCTAGGATTCAAATCAAGATTTGACATGTAATGACCCCAACATTCTCCTATTCTAAGAGTGAAGTCTACGGTGTCCTTCTAGCATGTTTTGTTCTCACTCACATGCATCCTGGGAAAATTTCCAAGAGGTCACCCAACATAGAATTACTCCAAGAAAAACACGTTTAACCTTGGAGTTTCTATGATTGAGCCATTGAAGGTGCATCTTGTTGGTATAGGTAGTGACTTTCAATTCTTTTAAGCCTTTCTTAGCTAACCTATCCTCAGAGTCTCTCTCATTCGGATGTGATCTTGGTTCATTCATGTACCCCTCCTTACTCGGGTGTCACATGCCCACTAGCTTCCGTGTTAGTTTGTCTCGGAATTCATGTACCCCTCCTTATCGATATTGAAAATGTTCTCTTGACATGTAGGGACATTATATTTAGGGCATGCATGGGATCGATTTTGAAAGGGTTAAAATAACTTTTGTCAGGTTTCAAATTAACTCAAAACATGCTTTTAATCCTCCAAAATCAATTTAAGGTTGGGTTTTACTCTTTTAACACGACTTTCACATTAAAAATTGTTTTTGGATGATTATAACCATGTTTCAAAGTGATTTGAACATGAAAAAAGTGATTTTAATAATTTCAAAAGTCACTCCAAAACGTGCTATTTTAGTTGTTTTAAGAAAAATCTATGTTACTTTTAACTAATTTTAGATGTCCTACGCTCCTCTATTCTCTTCTATCATTCCTTCCCTATCCTGCTAATGCTCGAATGTCCGATCTATATGAAAAATTGGGGCGTTATTAGATTTTTAGCCTCATGTATAGCATTTCTATGATAACAAGCATGGCCCCATTTAACTGAAGCTCTTTTCTTGATGGGCTGACTCATCCTGCGCTCCTCTATACTTCTAGAACATTAGTATTAGTACATCATATTGGTGCCGTGGAAGGCCCATCCTTTTTGTTCTAAGAACTTGAGTTGCTCATTTTCCCCTCTTTAATGGGGATGGTGCAATGTAGACCTTCTTTTAGTGCTAAAAAATTAGATTGTAAATACATTTATGATTGGGTCTAGTGTGGTAGATTAAATAGATAGAGCTTTATGTTGGTCTTTTAACCATAAAGTAGGCTTCAACTTGGTTATTTTCCATTTGGCCTTTTCCCCCAGTCCTCAACTATCATTTTCTTTTATTGGTCTTTTCCGTTTCTTTGGGGTCTGGCATTGTCATGATGGATACTATGGAGTTTAGACTATTTAGCAAAAAACTGAATTTGAATTTAGAAACATCTAATGGTTTAGAGAAAAATTAGAACATATCGACTAGATAAGAAATTAACTAGCCATTTCATTAGTGATACATATAGTTCCACTATAGATGCTTTCTATTTGAACACTACCTTCGACTTCAATTTCACTTTCATCAGTGATACATATAGCTCCACTATAGATGCCTTCTTTTTTAACACCACCTTCGACTTGAACTTCACTTTCTGAACCTAGTATTTTTTGGATTTTTCAATCATGTACCAAGCAATAAATAACAGTGAAATTAAAAACAACTATTTATTTATTCTTGTTCTAATGTAGAAAATGGCGCCCTTTATATTTGTTTTCATAAGTTTGATGTCAAATGAGACTGCTTTTTGAAAAAGTTGTCAATGTTGCTTGATGTTTTCTAATGTTTGATGCATACTTCATTCCTTGCTAATTGTACTGTCGTTCCCCTTTCAAATTTCCCTCCTCTCGTCATTTATTTCTAATCATAAATATGTGGGCATAACACATATTTGAAAATTTTTAGAGGGGAATGCCCTCCGGGATAGAGAGGTTCTTTGAGCATTATACATGCCTCTTAATCCTTTCTTGTAACAGGTCCCAGAAACTGCAATTTTCTTCATCGAAGATGGGAAGAAGGTTCCTGCTGCCTGACAATGAAATCATGGCAAACAAATAATATGTGGGCTTCTGTGCATCCTTTTCCCTTCTTGTGCGAGTCCTTTAAAGATTCCACAAGTAAGTGGTCATTACAGTTTTTTTTTTTTTTTTTTTTTTCAGTTCCAAAAACCTTTGTATCGGATCACGAGACTTTTTGTCCTACTTTCTTCAATCCTTGTACCTTTTCTCAGGAGATGAGCTTTTATTTATTTTGGCCTTTTTTATTTAGGGAAGAAAAAAGAAAAAAGAAATATATATCTTGGTCAAACTCTGTTCCAACTTATGGGTTATTTGTATAGAGGACTATATCTCGATATTATAATTTTTTTTTCTACCCTTTACAGAAACAACTCTAGAAACGTCTATCTCCATAT

mRNA sequence

ATAACATTCCAACGCAATACATTCACCGTTCATCGCCTCTCGAATCTCATTCTTAGGCTACAAAGCAAAAGAGAGCGGAAACTAATTGTCTTTCGCACCAAAAAGGGGGCGGAGAGACTGTGCTTGAGGAGCTCTAATGGCGGACAAACCCCAGCCGGTGCGCGTTTTGTACTGTCCGGTCTGCAGTTTGCCGGCGGAGTATTGCGAATTCGGACCCGATTTCGAAAAATGCAAGCCCTGGTTGATCCAAAATGCTCCCGACCTCTATCCCGATCTTCTCAAAGAGGCCAATGCGAAGGAAGCTGGTGAAGTTTCTAATAAACTGCAATCGACCAGTATCTCATCTGCTGCTGGTGATGGAGCTACTTCTTCAGCGCCTAAGCAAGAGGAAGTGAAACGTCTTCCTGGTGGCAAGATAAAGAAAAAAGAGAGGCAAGAAGTTATCATTGAGAAGGTTACTCGCAATAAGAGAAAGTGCATTACAACTGTAAAAGGGTTAGACCTTTTTGGAGTTAAACTAAGTGATGCTTCAAAGAAACTTGGAAAGAAGTTTGCTACTGGGGCCTCTGTGGTTAAGGGGCCAACTGAGAAAGAGCAAATTGATGTTCAAGGGGACATATCTTATGACATTGTGGATTTCATCACCGAGACTTGGCGTGATGTCCCAGAAACTGCAATTTTCTTCATCGAAGATGGGAAGAAGGTTCCTGCTGCCTGACAATGAAATCATGGCAAACAAATAATATTTCCAAAAACCTTTGTATCGGATCACGAGACTTTTTGTCCTACTTTCTTCAATCCTTGTACCTTTTCTCAGGAGATGAGCTTTTATTTATTTTGGCCTTTTTTATTTAGGGAAGAAAAAAGAAAAAAGAAATATATATCTTGGTCAAACTCTGTTCCAACTTATGGGTTATTTGTATAGAGGACTATATCTCGATATTATAATTTTTTTTTCTACCCTTTACAGAAACAACTCTAGAAACGTCTATCTCCATAT

Coding sequence (CDS)

ATGGCGGACAAACCCCAGCCGGTGCGCGTTTTGTACTGTCCGGTCTGCAGTTTGCCGGCGGAGTATTGCGAATTCGGACCCGATTTCGAAAAATGCAAGCCCTGGTTGATCCAAAATGCTCCCGACCTCTATCCCGATCTTCTCAAAGAGGCCAATGCGAAGGAAGCTGGTGAAGTTTCTAATAAACTGCAATCGACCAGTATCTCATCTGCTGCTGGTGATGGAGCTACTTCTTCAGCGCCTAAGCAAGAGGAAGTGAAACGTCTTCCTGGTGGCAAGATAAAGAAAAAAGAGAGGCAAGAAGTTATCATTGAGAAGGTTACTCGCAATAAGAGAAAGTGCATTACAACTGTAAAAGGGTTAGACCTTTTTGGAGTTAAACTAAGTGATGCTTCAAAGAAACTTGGAAAGAAGTTTGCTACTGGGGCCTCTGTGGTTAAGGGGCCAACTGAGAAAGAGCAAATTGATGTTCAAGGGGACATATCTTATGACATTGTGGATTTCATCACCGAGACTTGGCGTGATGTCCCAGAAACTGCAATTTTCTTCATCGAAGATGGGAAGAAGGTTCCTGCTGCCTGA

Protein sequence

MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVSNKLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETAIFFIEDGKKVPAA

Homology

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BLAST of Cp4.1LG18g03510.1 vs. ExPASy Swiss-Prot
Match: Q2H5Z7 (Translation machinery-associated protein 22 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=TMA22 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.6e-31
Identity = 79/192 (41.15%), Postives = 114/192 (59.38%), Query Frame = 0


Query: 4   KPQPV--RVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVSN 63
           +P PV   ++YC VC+LP EYCE+G   +KC+ WL +  PDLY  +     + EA E + 
Sbjct: 3   EPTPVGREIIYCGVCTLPPEYCEYGGTTKKCQEWLEKKHPDLYARIW----SPEALEAAT 62

Query: 64  KLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKGL 123
              S +    A   A   A K E  ++    K+ K     V I+++ RNKRK +T+V GL
Sbjct: 63  ASLSLAAQERAAKDAAKKAAKAEAAEQKHADKLAK---SVVTIKRIERNKRKFVTSVTGL 122

Query: 124 DLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETAI 183
           + FG++L   +K  GKKFATGASV K P+  E+I VQGD+S +I +F+ E ++D+PE  I
Sbjct: 123 EAFGLELKKVAKDFGKKFATGASVTKVPSGGEEIVVQGDVSGEIEEFLLEKYKDIPEDNI 182

Query: 184 FFIEDGKKVPAA 194
             +ED KK  +A
Sbjct: 183 ELVEDKKKKASA 187

[Close]

BLAST of Cp4.1LG18g03510.1 vs. ExPASy Swiss-Prot
Match: O42929 (Translation machinery-associated protein 22 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tma22 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.6e-31
Identity = 80/186 (43.01%), Postives = 112/186 (60.22%), Query Frame = 0


Query: 5   PQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVSNKLQ 64
           P+   VLYC VC+LP EYCEF    +KCK WL  + PD+Y  L  E       ++S  L+
Sbjct: 7   PKLKSVLYCDVCTLPVEYCEFEGTLKKCKEWLKSSHPDVYDKLYGEQ------DLSKDLE 66

Query: 65  STSISSAAGDGATSSAPKQ--EEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKGLD 124
           +T   S   D      P +  +E KR+   + K+    +V+I+ + R KRK +TTV+GLD
Sbjct: 67  NTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRM-ASKVLIKTIERTKRKRVTTVQGLD 126

Query: 125 LFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETAIF 184
            FG++   A+K L  KFATGASV K   +K++I VQGD++YDI DFI E +++VPE  I 
Sbjct: 127 AFGIETKKAAKMLANKFATGASVTKTADKKDEIVVQGDLNYDIFDFILEKFKEVPEDNIK 185

Query: 185 FIEDGK 189
            +ED K
Sbjct: 187 IVEDTK 185

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BLAST of Cp4.1LG18g03510.1 vs. ExPASy Swiss-Prot
Match: Q9P3T4 (Translation machinery-associated protein 22 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=tma-22 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 8.7e-30
Identity = 74/181 (40.88%), Postives = 109/181 (60.22%), Query Frame = 0


Query: 10  VLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLK-EANAKEAGEVSNKLQSTSI 69
           V+YC VCSLP EYCE+G   +KC+ WL +N P +Y  +   E    E   +S + Q  ++
Sbjct: 9   VVYCGVCSLPPEYCEYGGTVKKCQQWLEKNQPTMYSRIWSPEVLEAEMASLSVEAQERAM 68

Query: 70  SSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKGLDLFGVKL 129
             A    A + A +Q++          K+    V I+++ RNKRK +T+V GL+ FG++L
Sbjct: 69  KDAKKKAAKAEAAEQKQA--------DKRANSVVTIKRIERNKRKYVTSVSGLEAFGLEL 128

Query: 130 SDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETAIFFIEDGK 189
              +K  GKKFATG+SV K P+  E+I VQGD+S +I +FI E +++VPE  I  +ED K
Sbjct: 129 KKVAKDFGKKFATGSSVTKVPSGGEEIVVQGDVSGEIEEFILEKYKEVPEDNIELVEDKK 181

[Close]

BLAST of Cp4.1LG18g03510.1 vs. ExPASy Swiss-Prot
Match: A1DAY1 (Translation machinery-associated protein 22 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=tma22 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.3e-29
Identity = 73/186 (39.25%), Postives = 114/186 (61.29%), Query Frame = 0


Query: 6   QPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLL-KEANAKEAGEVSNKLQ 65
           Q  +V+YC VC+LP EYCEFG   +KC+ WL  N  DLY  L  +EA +    E+S  ++
Sbjct: 13  QAKQVVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHADLYQRLYSEEALSSNLSELSVSVR 72

Query: 66  STSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKGLDLF 125
             +   AA   A ++A +  + +R    K++        I++V RNKRK +T + GL++ 
Sbjct: 73  ERAAKDAAKKEAKAAAAEARDAERKAAAKVQ--------IKRVERNKRKHVTVITGLEVH 132

Query: 126 GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETW-RDVPETAIFF 185
           G++    +K+LGKKFATG+SV K P   E+I VQGD+S D+ +++ E + +++PE+ I  
Sbjct: 133 GLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVQEWLLELYGKEIPESNIEL 190

Query: 186 IEDGKK 190
           +ED KK
Sbjct: 193 VEDKKK 190

[Close]

BLAST of Cp4.1LG18g03510.1 vs. ExPASy Swiss-Prot
Match: Q4WBL6 (Translation machinery-associated protein 22 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=tma22 PE=3 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 9.7e-29
Identity = 72/186 (38.71%), Postives = 114/186 (61.29%), Query Frame = 0


Query: 6   QPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLL-KEANAKEAGEVSNKLQ 65
           Q  +V+YC VC+LP EYCEFG   +KC+ WL  N  +LY  L  +EA +    E+S  ++
Sbjct: 13  QAKKVVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHAELYQRLYSEEALSSNLSELSVSVR 72

Query: 66  STSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKGLDLF 125
             +   AA   A ++A +  + +R    K++        I++V RNKRK +T + GL++ 
Sbjct: 73  ERAAKDAAKKEAKAAAAEARDAERKAAAKVQ--------IKRVERNKRKHVTVITGLEVH 132

Query: 126 GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETW-RDVPETAIFF 185
           G++    +K+LGKKFATG+SV K P   E+I VQGD+S D+ +++ E + +++PE+ I  
Sbjct: 133 GLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVKEWLLELYGKEIPESNIEL 190

Query: 186 IEDGKK 190
           +ED KK
Sbjct: 193 VEDKKK 190

[Close]

BLAST of Cp4.1LG18g03510.1 vs. NCBI nr
Match: XP_023516091.1 (translation machinery-associated protein 22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379 bits (974), Expect = 1.30e-132
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60
           MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS
Sbjct: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NKLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120
           NKLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG
Sbjct: 61  NKLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA 180

Query: 181 IFFIEDGKKVPAA 193
           IFFIEDGKKVPAA
Sbjct: 181 IFFIEDGKKVPAA 193

[Close]

BLAST of Cp4.1LG18g03510.1 vs. NCBI nr
Match: XP_022960996.1 (translation machinery-associated protein 22-like [Cucurbita moschata] >KAG7023664.1 tma22 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 378 bits (970), Expect = 5.29e-132
Identity = 192/193 (99.48%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60
           MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS
Sbjct: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NKLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120
           N+LQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA 180

Query: 181 IFFIEDGKKVPAA 193
           IFFIEDGKKVPAA
Sbjct: 181 IFFIEDGKKVPAA 193

[Close]

BLAST of Cp4.1LG18g03510.1 vs. NCBI nr
Match: XP_022987879.1 (translation machinery-associated protein 22-like [Cucurbita maxima])

HSP 1 Score: 377 bits (969), Expect = 7.51e-132
Identity = 191/193 (98.96%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60
           MADKPQPVRVLYCP+CSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS
Sbjct: 1   MADKPQPVRVLYCPICSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NKLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120
           N+LQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA 180

Query: 181 IFFIEDGKKVPAA 193
           IFFIEDGKKVPAA
Sbjct: 181 IFFIEDGKKVPAA 193

[Close]

BLAST of Cp4.1LG18g03510.1 vs. NCBI nr
Match: KAG6590002.1 (hypothetical protein SDJN03_15425, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 374 bits (961), Expect = 1.78e-129
Identity = 189/191 (98.95%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60
           MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS
Sbjct: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NKLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120
           N+LQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA 180

Query: 181 IFFIEDGKKVP 191
           IFFIEDGKK+P
Sbjct: 181 IFFIEDGKKIP 191

[Close]

BLAST of Cp4.1LG18g03510.1 vs. NCBI nr
Match: XP_004144004.1 (translation machinery-associated protein 22 [Cucumis sativus] >KAE8653433.1 hypothetical protein Csa_007666 [Cucumis sativus])

HSP 1 Score: 367 bits (941), Expect = 1.40e-127
Identity = 185/193 (95.85%), Postives = 190/193 (98.45%), Query Frame = 0


Query: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60
           MA+KPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS
Sbjct: 1   MAEKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NKLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120
           N+LQSTSISSAAGDGA SS PKQEEVKRLPGGKIKKK++QEVIIEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGAASSGPKQEEVKRLPGGKIKKKDKQEVIIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI+YDIVDFITETW DVPETA
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFITETWPDVPETA 180

Query: 181 IFFIEDGKKVPAA 193
           IFFIEDGKKVPAA
Sbjct: 181 IFFIEDGKKVPAA 193

[Close]

BLAST of Cp4.1LG18g03510.1 vs. ExPASy TrEMBL
Match: A0A6J1H953 (Translation machinery-associated protein 22 OS=Cucurbita moschata OX=3662 GN=LOC111461628 PE=3 SV=1)

HSP 1 Score: 378 bits (970), Expect = 2.56e-132
Identity = 192/193 (99.48%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60
           MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS
Sbjct: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NKLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120
           N+LQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA 180

Query: 181 IFFIEDGKKVPAA 193
           IFFIEDGKKVPAA
Sbjct: 181 IFFIEDGKKVPAA 193

[Close]

BLAST of Cp4.1LG18g03510.1 vs. ExPASy TrEMBL
Match: A0A6J1JK26 (Translation machinery-associated protein 22 OS=Cucurbita maxima OX=3661 GN=LOC111485287 PE=3 SV=1)

HSP 1 Score: 377 bits (969), Expect = 3.64e-132
Identity = 191/193 (98.96%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60
           MADKPQPVRVLYCP+CSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS
Sbjct: 1   MADKPQPVRVLYCPICSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NKLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120
           N+LQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA 180

Query: 181 IFFIEDGKKVPAA 193
           IFFIEDGKKVPAA
Sbjct: 181 IFFIEDGKKVPAA 193

[Close]

BLAST of Cp4.1LG18g03510.1 vs. ExPASy TrEMBL
Match: A0A6J1F5N5 (Translation machinery-associated protein 22 OS=Cucurbita moschata OX=3662 GN=LOC111441062 PE=3 SV=1)

HSP 1 Score: 361 bits (926), Expect = 1.31e-125
Identity = 180/193 (93.26%), Postives = 187/193 (96.89%), Query Frame = 0


Query: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60
           MADKPQP+RVLYCP+CSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEAN KE GEVS
Sbjct: 1   MADKPQPIRVLYCPICSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60

Query: 61  NKLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120
           N+LQST ISSAAGDGA SSAPK+EEVKRLPGGKIKKKE+QEV+IEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTCISSAAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEK+QIDVQGDI YDIVDFITETW DVPETA
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDVPETA 180

Query: 181 IFFIEDGKKVPAA 193
           IFFIEDGKKVPAA
Sbjct: 181 IFFIEDGKKVPAA 193

[Close]

BLAST of Cp4.1LG18g03510.1 vs. ExPASy TrEMBL
Match: A0A6J1D0S6 (Translation machinery-associated protein 22 OS=Momordica charantia OX=3673 GN=LOC111016533 PE=3 SV=1)

HSP 1 Score: 360 bits (924), Expect = 2.64e-125
Identity = 181/193 (93.78%), Postives = 188/193 (97.41%), Query Frame = 0


Query: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60
           MA+KPQPV VLYCPVCSLPAEYCEFGPDFEKCKPWLI+NAPDLYPDLLKEANAKEA E S
Sbjct: 1   MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEAS 60

Query: 61  NKLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120
           N+LQSTSISSAAGDGA SSAPKQEEVKRLPGGKIKKKE+QEV+IEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI+YDIVDF+TETW DVPETA
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDVPETA 180

Query: 181 IFFIEDGKKVPAA 193
           IFFIEDGKKVPAA
Sbjct: 181 IFFIEDGKKVPAA 193

[Close]

BLAST of Cp4.1LG18g03510.1 vs. ExPASy TrEMBL
Match: A0A6J1HZE2 (Translation machinery-associated protein 22 OS=Cucurbita maxima OX=3661 GN=LOC111467611 PE=3 SV=1)

HSP 1 Score: 358 bits (920), Expect = 1.08e-124
Identity = 179/193 (92.75%), Postives = 186/193 (96.37%), Query Frame = 0


Query: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60
           MADKPQP+RVLYCP+CSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEAN KE GEVS
Sbjct: 1   MADKPQPIRVLYCPICSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60

Query: 61  NKLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120
           N+LQST ISSAAGDGA SSAPK+EEVKRLPGGKIKKKE+QEV+IEKVTRNKRKCIT VKG
Sbjct: 61  NQLQSTCISSAAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITIVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDVPETA 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEK+QIDVQGDI YDIVDFITETW DVPETA
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDVPETA 180

Query: 181 IFFIEDGKKVPAA 193
           IFFIEDGKKVPAA
Sbjct: 181 IFFIEDGKKVPAA 193

[Close]

BLAST of Cp4.1LG18g03510.1 vs. TAIR 10
Match: AT5G11900.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 310.1 bits (793), Expect = 1.3e-84
Identity = 157/197 (79.70%), Postives = 172/197 (87.31%), Query Frame = 0


Query: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60
           MA+K +PV+VLYC VCSLPAEYCEFGPDF +CKPWL++NAPDLYPDLLKEAN K A  VS
Sbjct: 1   MAEKLEPVKVLYCGVCSLPAEYCEFGPDFARCKPWLVENAPDLYPDLLKEANEKAADNVS 60

Query: 61  NKLQSTSISSAAGDGATSSA-----PKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCI 120
           +KLQS  ISS   DGA SSA      K+EEVKRLPGGK+KKK+RQEVIIEKV RNKRKCI
Sbjct: 61  DKLQSVGISSGGADGAPSSAQTGGTSKKEEVKRLPGGKVKKKDRQEVIIEKVVRNKRKCI 120

Query: 121 TTVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRD 180
           T VKGL+LFG+KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI YDIV+FIT+TW D
Sbjct: 121 TIVKGLELFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIIYDIVEFITDTWPD 180

Query: 181 VPETAIFFIEDGKKVPA 193
           VPE +IFFIEDGKKV A
Sbjct: 181 VPERSIFFIEDGKKVQA 197

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g03510.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2H5Z7	3.6e-31	41.15	Translation machinery-associated protein 22 OS=Chaetomium globosum (strain ATCC ...	[more]
O42929	3.6e-31	43.01	Translation machinery-associated protein 22 OS=Schizosaccharomyces pombe (strain...	[more]
Q9P3T4	8.7e-30	40.88	Translation machinery-associated protein 22 OS=Neurospora crassa (strain ATCC 24...	[more]
A1DAY1	4.3e-29	39.25	Translation machinery-associated protein 22 OS=Neosartorya fischeri (strain ATCC...	[more]
Q4WBL6	9.7e-29	38.71	Translation machinery-associated protein 22 OS=Neosartorya fumigata (strain ATCC...	[more]

BLAST of Cp4.1LG18g03510.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516091.1	1.30e-132	100.00	translation machinery-associated protein 22-like [Cucurbita pepo subsp. pepo]	[more]
XP_022960996.1	5.29e-132	99.48	translation machinery-associated protein 22-like [Cucurbita moschata] >KAG702366...	[more]
XP_022987879.1	7.51e-132	98.96	translation machinery-associated protein 22-like [Cucurbita maxima]	[more]
KAG6590002.1	1.78e-129	98.95	hypothetical protein SDJN03_15425, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004144004.1	1.40e-127	95.85	translation machinery-associated protein 22 [Cucumis sativus] >KAE8653433.1 hypo...	[more]

BLAST of Cp4.1LG18g03510.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H953	2.56e-132	99.48	Translation machinery-associated protein 22 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JK26	3.64e-132	98.96	Translation machinery-associated protein 22 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1F5N5	1.31e-125	93.26	Translation machinery-associated protein 22 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1D0S6	2.64e-125	93.78	Translation machinery-associated protein 22 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1HZE2	1.08e-124	92.75	Translation machinery-associated protein 22 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Cp4.1LG18g03510.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11900.1	1.3e-84	79.70	Translation initiation factor SUI1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.780.10		coord: 51..180 e-value: 2.2E-19 score: 72.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..77
None	No IPR available	PANTHER	PTHR12789	DENSITY-REGULATED PROTEIN HOMOLOG	coord: 1..193
None	No IPR available	PANTHER	PTHR12789:SF3	TRANSLATION MACHINERY-ASSOCIATED PROTEIN 22	coord: 1..193
None	No IPR available	CDD	cd11607	DENR_C	coord: 100..185 e-value: 2.2474E-42 score: 135.378
IPR005873	DENR family, eukaryotes	TIGRFAM	TIGR01159	TIGR01159	coord: 7..181 e-value: 2.5E-53 score: 178.4
IPR001950	SUI1 domain	PFAM	PF01253	SUI1	coord: 100..172 e-value: 6.5E-20 score: 71.4
IPR001950	SUI1 domain	PROSITE	PS50296	SUI1	coord: 102..173 score: 19.442181
IPR036877	SUI1 domain superfamily	SUPERFAMILY	55159	eIF1-like	coord: 19..183

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG18g03510	Cp4.1LG18g03510	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG18g03510.1:five_prime_utr:001	Cp4.1LG18g03510.1:five_prime_utr:001	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG18g03510.1:exon:001	Cp4.1LG18g03510.1:exon:001	exon
Cp4.1LG18g03510.1:exon:002	Cp4.1LG18g03510.1:exon:002	exon
Cp4.1LG18g03510.1:exon:003	Cp4.1LG18g03510.1:exon:003	exon
Cp4.1LG18g03510.1:exon:004	Cp4.1LG18g03510.1:exon:004	exon
Cp4.1LG18g03510.1:exon:005	Cp4.1LG18g03510.1:exon:005	exon
Cp4.1LG18g03510.1:exon:006	Cp4.1LG18g03510.1:exon:006	exon
Cp4.1LG18g03510.1:exon:007	Cp4.1LG18g03510.1:exon:007	exon
Cp4.1LG18g03510.1:exon:008	Cp4.1LG18g03510.1:exon:008	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG18g03510.1:cds:001	Cp4.1LG18g03510.1:cds:001	CDS
Cp4.1LG18g03510.1:cds:002	Cp4.1LG18g03510.1:cds:002	CDS
Cp4.1LG18g03510.1:cds:003	Cp4.1LG18g03510.1:cds:003	CDS
Cp4.1LG18g03510.1:cds:004	Cp4.1LG18g03510.1:cds:004	CDS
Cp4.1LG18g03510.1:cds:005	Cp4.1LG18g03510.1:cds:005	CDS
Cp4.1LG18g03510.1:cds:006	Cp4.1LG18g03510.1:cds:006	CDS
Cp4.1LG18g03510.1:cds:007	Cp4.1LG18g03510.1:cds:007	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG18g03510.1:three_prime_utr:001	Cp4.1LG18g03510.1:three_prime_utr:001	three_prime_UTR
Cp4.1LG18g03510.1:three_prime_utr:002	Cp4.1LG18g03510.1:three_prime_utr:002	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG18g03510.1	Cp4.1LG18g03510.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
biological_process	GO:0001731	formation of translation preinitiation complex
biological_process	GO:0002188	translation reinitiation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003729	mRNA binding