Cp4.1LG17g10450.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g10450.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	DUF761 domain-containing protein
Location	Cp4.1LG17: 7882565 .. 7883176 (+)
Sequence length	612
RNA-Seq Expression	Cp4.1LG17g10450.1
Synteny	Cp4.1LG17g10450.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATCTCTGTCTGAAAACAGTAGAGGGGGCTCTGAAGACCCTCTGATTGAGCTAGAAAATTCATCTGATTGCAATGGATCCATAGCAAGTTCCCCACATTCAGACCGGAGTTTTGCAAGTATTCCGAAAGCCTTATCCCGGGGAAAATCCGTTAGAACAGTTAGAGCAAATGCAGTAACAATGGAGGAAACGAACAGCCAAGAGATCAAAAACCAAGTTGAGAATGATAACAATACGAGAGAAGATGGAATGCGACATGGGCGGCCTAGTATTGTTAACCCGAATGCTCGTAATCCAAATCGTTTGTCGAAGACAACATTCTTGGGGATTGAGAAGCAGAAGGAAGACACTGAGAGTCTACTCACAGATGATGGTAAAGACCAGTCTGAGAGGGAGGATGAAACTATTTTTGGAAATTCAGATGAAGAAGCTGCTTCGAGCATGGTGGGAGATTCGGAATCAGGGGCGCACGAGGTCGACAAGAAAGCTGGGGAGTTCATAGCCAAGTTTAGGGAGCAAATACATCTTCAGAGGATGGCTTCAGCAGATAAAAGATTGAGAGGAGGATGGGGTTCATTCAGCAGCACAAGCAGCAGCCATTTCAGTTGA

mRNA sequence

ATGAGATCTCTGTCTGAAAACAGTAGAGGGGGCTCTGAAGACCCTCTGATTGAGCTAGAAAATTCATCTGATTGCAATGGATCCATAGCAAGTTCCCCACATTCAGACCGGAGTTTTGCAAGTATTCCGAAAGCCTTATCCCGGGGAAAATCCGTTAGAACAGTTAGAGCAAATGCAGTAACAATGGAGGAAACGAACAGCCAAGAGATCAAAAACCAAGTTGAGAATGATAACAATACGAGAGAAGATGGAATGCGACATGGGCGGCCTAGTATTGTTAACCCGAATGCTCGTAATCCAAATCGTTTGTCGAAGACAACATTCTTGGGGATTGAGAAGCAGAAGGAAGACACTGAGAGTCTACTCACAGATGATGGTAAAGACCAGTCTGAGAGGGAGGATGAAACTATTTTTGGAAATTCAGATGAAGAAGCTGCTTCGAGCATGGTGGGAGATTCGGAATCAGGGGCGCACGAGGTCGACAAGAAAGCTGGGGAGTTCATAGCCAAGTTTAGGGAGCAAATACATCTTCAGAGGATGGCTTCAGCAGATAAAAGATTGAGAGGAGGATGGGGTTCATTCAGCAGCACAAGCAGCAGCCATTTCAGTTGA

Coding sequence (CDS)

ATGAGATCTCTGTCTGAAAACAGTAGAGGGGGCTCTGAAGACCCTCTGATTGAGCTAGAAAATTCATCTGATTGCAATGGATCCATAGCAAGTTCCCCACATTCAGACCGGAGTTTTGCAAGTATTCCGAAAGCCTTATCCCGGGGAAAATCCGTTAGAACAGTTAGAGCAAATGCAGTAACAATGGAGGAAACGAACAGCCAAGAGATCAAAAACCAAGTTGAGAATGATAACAATACGAGAGAAGATGGAATGCGACATGGGCGGCCTAGTATTGTTAACCCGAATGCTCGTAATCCAAATCGTTTGTCGAAGACAACATTCTTGGGGATTGAGAAGCAGAAGGAAGACACTGAGAGTCTACTCACAGATGATGGTAAAGACCAGTCTGAGAGGGAGGATGAAACTATTTTTGGAAATTCAGATGAAGAAGCTGCTTCGAGCATGGTGGGAGATTCGGAATCAGGGGCGCACGAGGTCGACAAGAAAGCTGGGGAGTTCATAGCCAAGTTTAGGGAGCAAATACATCTTCAGAGGATGGCTTCAGCAGATAAAAGATTGAGAGGAGGATGGGGTTCATTCAGCAGCACAAGCAGCAGCCATTTCAGTTGA

Protein sequence

MRSLSENSRGGSEDPLIELENSSDCNGSIASSPHSDRSFASIPKALSRGKSVRTVRANAVTMEETNSQEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTESLLTDDGKDQSEREDETIFGNSDEEAASSMVGDSESGAHEVDKKAGEFIAKFREQIHLQRMASADKRLRGGWGSFSSTSSSHFS

Homology

[Close]

BLAST of Cp4.1LG17g10450.1 vs. NCBI nr
Match: XP_023514317.1 (uncharacterized protein LOC111778619 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380 bits (975), Expect = 7.85e-127
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MRSLSENSRGGSEDPLIELENSSDCNGSIASSPHSDRSFASIPKALSRGKSVRTVRANAV 60
           MRSLSENSRGGSEDPLIELENSSDCNGSIASSPHSDRSFASIPKALSRGKSVRTVRANAV
Sbjct: 391 MRSLSENSRGGSEDPLIELENSSDCNGSIASSPHSDRSFASIPKALSRGKSVRTVRANAV 450

Query: 61  TMEETNSQEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTES 120
           TMEETNSQEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTES
Sbjct: 451 TMEETNSQEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTES 510

Query: 121 LLTDDGKDQSEREDETIFGNSDEEAASSMVGDSESGAHEVDKKAGEFIAKFREQIHLQRM 180
           LLTDDGKDQSEREDETIFGNSDEEAASSMVGDSESGAHEVDKKAGEFIAKFREQIHLQRM
Sbjct: 511 LLTDDGKDQSEREDETIFGNSDEEAASSMVGDSESGAHEVDKKAGEFIAKFREQIHLQRM 570

Query: 181 ASADKRLRGGWGSFSSTSSSHFS 203
           ASADKRLRGGWGSFSSTSSSHFS
Sbjct: 571 ASADKRLRGGWGSFSSTSSSHFS 593

[Close]

BLAST of Cp4.1LG17g10450.1 vs. NCBI nr
Match: KAG6592930.1 (hypothetical protein SDJN03_12406, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 360 bits (925), Expect = 2.73e-119
Identity = 194/203 (95.57%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 1   MRSLSENSRGGSEDPLIELENSSDCNGSIASSPHSDRSFASIPKALSRGKSVRTVRANAV 60
           MRSLSENSRGGSEDPLIELENSSD NGS  SSPH D+SFASIPK LSRGKSVRTVRANAV
Sbjct: 391 MRSLSENSRGGSEDPLIELENSSDFNGSTVSSPHLDQSFASIPKTLSRGKSVRTVRANAV 450

Query: 61  TMEETNSQEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTES 120
           TMEET +QEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTES
Sbjct: 451 TMEETINQEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTES 510

Query: 121 LLTDDGKDQSEREDETIFGNSDEEAASSMVGDSESGAHEVDKKAGEFIAKFREQIHLQRM 180
           LLTDDGKDQSEREDETIFGNSDEEAASSM GDSESGAHEVDKKAGEFIAKFREQIHLQRM
Sbjct: 511 LLTDDGKDQSEREDETIFGNSDEEAASSMAGDSESGAHEVDKKAGEFIAKFREQIHLQRM 570

Query: 181 ASADKRLRGGWGSFSSTSSSHFS 203
           ASADKRLRGGWGSFSSTSSSHFS
Sbjct: 571 ASADKRLRGGWGSFSSTSSSHFS 593

[Close]

BLAST of Cp4.1LG17g10450.1 vs. NCBI nr
Match: XP_022960399.1 (uncharacterized protein LOC111461136 [Cucurbita moschata])

HSP 1 Score: 358 bits (918), Expect = 3.10e-118
Identity = 192/203 (94.58%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 1   MRSLSENSRGGSEDPLIELENSSDCNGSIASSPHSDRSFASIPKALSRGKSVRTVRANAV 60
           MRSLSENSRGGSEDPLIELENSSD NGS  SSPH D+SFASIPK LSRGKSVRT+RANAV
Sbjct: 391 MRSLSENSRGGSEDPLIELENSSDFNGSTVSSPHLDQSFASIPKILSRGKSVRTIRANAV 450

Query: 61  TMEETNSQEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTES 120
           TMEE  +QEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTES
Sbjct: 451 TMEEAINQEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTES 510

Query: 121 LLTDDGKDQSEREDETIFGNSDEEAASSMVGDSESGAHEVDKKAGEFIAKFREQIHLQRM 180
           LLTDDGKDQSEREDETIFGNSDEEAASSM GDSESGAHEVDKKAGEFIAKFREQIHLQRM
Sbjct: 511 LLTDDGKDQSEREDETIFGNSDEEAASSMAGDSESGAHEVDKKAGEFIAKFREQIHLQRM 570

Query: 181 ASADKRLRGGWGSFSSTSSSHFS 203
           ASADKRLRGGWGSFSSTSSSHFS
Sbjct: 571 ASADKRLRGGWGSFSSTSSSHFS 593

[Close]

BLAST of Cp4.1LG17g10450.1 vs. NCBI nr
Match: KAG7025338.1 (hypothetical protein SDJN02_11833, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358 bits (918), Expect = 3.10e-118
Identity = 192/203 (94.58%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 1   MRSLSENSRGGSEDPLIELENSSDCNGSIASSPHSDRSFASIPKALSRGKSVRTVRANAV 60
           MRSLSENSRGGSEDPLIELENSSD NGS  SSPH D+SFASIPK LSRGKSVRT+RANAV
Sbjct: 391 MRSLSENSRGGSEDPLIELENSSDFNGSTVSSPHLDQSFASIPKILSRGKSVRTIRANAV 450

Query: 61  TMEETNSQEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTES 120
           TMEE  +QEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTES
Sbjct: 451 TMEEAINQEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTES 510

Query: 121 LLTDDGKDQSEREDETIFGNSDEEAASSMVGDSESGAHEVDKKAGEFIAKFREQIHLQRM 180
           LLTDDGKDQSEREDETIFGNSDEEAASSM GDSESGAHEVDKKAGEFIAKFREQIHLQRM
Sbjct: 511 LLTDDGKDQSEREDETIFGNSDEEAASSMAGDSESGAHEVDKKAGEFIAKFREQIHLQRM 570

Query: 181 ASADKRLRGGWGSFSSTSSSHFS 203
           ASADKRLRGGWGSFSSTSSSHFS
Sbjct: 571 ASADKRLRGGWGSFSSTSSSHFS 593

[Close]

BLAST of Cp4.1LG17g10450.1 vs. NCBI nr
Match: XP_023004887.1 (uncharacterized protein LOC111498067 [Cucurbita maxima])

HSP 1 Score: 342 bits (876), Expect = 5.70e-112
Identity = 188/203 (92.61%), Postives = 189/203 (93.10%), Query Frame = 0


Query: 1   MRSLSENSRGGSEDPLIELENSSDCNGSIASSPHSDRSFASIPKALSRGKSVRTVRANAV 60
           MRSLSENSRGGSEDPLIELENSSD NGSI SSPH D+SFASIPK LSRGKSVRTVRANAV
Sbjct: 391 MRSLSENSRGGSEDPLIELENSSDFNGSIVSSPHLDQSFASIPKTLSRGKSVRTVRANAV 450

Query: 61  TMEETNSQEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTES 120
           TMEET SQEIKNQVENDNNTR     HGRPSIVNPNARNPN LSKTTFLGIEKQKEDTES
Sbjct: 451 TMEETISQEIKNQVENDNNTR-----HGRPSIVNPNARNPNHLSKTTFLGIEKQKEDTES 510

Query: 121 LLTDDGKDQSEREDETIFGNSDEEAASSMVGDSESGAHEVDKKAGEFIAKFREQIHLQRM 180
            LTDDGKDQSEREDETIFGNSDEEAASSM GDSESGAHEVDKKAGEFIAKFREQIHLQRM
Sbjct: 511 QLTDDGKDQSEREDETIFGNSDEEAASSMAGDSESGAHEVDKKAGEFIAKFREQIHLQRM 570

Query: 181 ASADKRLRGGWGSFSSTSSSHFS 203
           ASADKRLRGGWGSFSS SSSHFS
Sbjct: 571 ASADKRLRGGWGSFSSASSSHFS 588

[Close]

BLAST of Cp4.1LG17g10450.1 vs. ExPASy TrEMBL
Match: A0A6J1HAX3 (uncharacterized protein LOC111461136 OS=Cucurbita moschata OX=3662 GN=LOC111461136 PE=4 SV=1)

HSP 1 Score: 358 bits (918), Expect = 1.50e-118
Identity = 192/203 (94.58%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 1   MRSLSENSRGGSEDPLIELENSSDCNGSIASSPHSDRSFASIPKALSRGKSVRTVRANAV 60
           MRSLSENSRGGSEDPLIELENSSD NGS  SSPH D+SFASIPK LSRGKSVRT+RANAV
Sbjct: 391 MRSLSENSRGGSEDPLIELENSSDFNGSTVSSPHLDQSFASIPKILSRGKSVRTIRANAV 450

Query: 61  TMEETNSQEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTES 120
           TMEE  +QEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTES
Sbjct: 451 TMEEAINQEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTES 510

Query: 121 LLTDDGKDQSEREDETIFGNSDEEAASSMVGDSESGAHEVDKKAGEFIAKFREQIHLQRM 180
           LLTDDGKDQSEREDETIFGNSDEEAASSM GDSESGAHEVDKKAGEFIAKFREQIHLQRM
Sbjct: 511 LLTDDGKDQSEREDETIFGNSDEEAASSMAGDSESGAHEVDKKAGEFIAKFREQIHLQRM 570

Query: 181 ASADKRLRGGWGSFSSTSSSHFS 203
           ASADKRLRGGWGSFSSTSSSHFS
Sbjct: 571 ASADKRLRGGWGSFSSTSSSHFS 593

[Close]

BLAST of Cp4.1LG17g10450.1 vs. ExPASy TrEMBL
Match: A0A6J1KRM7 (uncharacterized protein LOC111498067 OS=Cucurbita maxima OX=3661 GN=LOC111498067 PE=4 SV=1)

HSP 1 Score: 342 bits (876), Expect = 2.76e-112
Identity = 188/203 (92.61%), Postives = 189/203 (93.10%), Query Frame = 0


Query: 1   MRSLSENSRGGSEDPLIELENSSDCNGSIASSPHSDRSFASIPKALSRGKSVRTVRANAV 60
           MRSLSENSRGGSEDPLIELENSSD NGSI SSPH D+SFASIPK LSRGKSVRTVRANAV
Sbjct: 391 MRSLSENSRGGSEDPLIELENSSDFNGSIVSSPHLDQSFASIPKTLSRGKSVRTVRANAV 450

Query: 61  TMEETNSQEIKNQVENDNNTREDGMRHGRPSIVNPNARNPNRLSKTTFLGIEKQKEDTES 120
           TMEET SQEIKNQVENDNNTR     HGRPSIVNPNARNPN LSKTTFLGIEKQKEDTES
Sbjct: 451 TMEETISQEIKNQVENDNNTR-----HGRPSIVNPNARNPNHLSKTTFLGIEKQKEDTES 510

Query: 121 LLTDDGKDQSEREDETIFGNSDEEAASSMVGDSESGAHEVDKKAGEFIAKFREQIHLQRM 180
            LTDDGKDQSEREDETIFGNSDEEAASSM GDSESGAHEVDKKAGEFIAKFREQIHLQRM
Sbjct: 511 QLTDDGKDQSEREDETIFGNSDEEAASSMAGDSESGAHEVDKKAGEFIAKFREQIHLQRM 570

Query: 181 ASADKRLRGGWGSFSSTSSSHFS 203
           ASADKRLRGGWGSFSS SSSHFS
Sbjct: 571 ASADKRLRGGWGSFSSASSSHFS 588

[Close]

BLAST of Cp4.1LG17g10450.1 vs. ExPASy TrEMBL
Match: A0A0A0K9X1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G103540 PE=4 SV=1)

HSP 1 Score: 251 bits (642), Expect = 3.91e-77
Identity = 149/220 (67.73%), Postives = 169/220 (76.82%), Query Frame = 0


Query: 1   MRSLSENSRGGSEDPLIELENSSDCNGSIASSPHSDRSFASIPKALSRGKSVRTVRANAV 60
           + SLSENSRG SEDPLI+ ENSS+CN S+ SSP  DR+FA+ PKALSRGKSVRTVRA+  
Sbjct: 381 LSSLSENSRGSSEDPLIDPENSSECNESVVSSPRLDRNFANTPKALSRGKSVRTVRASTS 440

Query: 61  TMEETNSQEI-KNQVENDNNT------------REDGMRHGRPSIVNPNARNPNRLSKTT 120
            +EE  +QE+ +NQVE+D+N             RED   HG P I N NA   NR SKTT
Sbjct: 441 AIEEMKAQEMYRNQVEHDDNVENKFEGGMSPYMREDETGHGWPGINNLNAAYSNRYSKTT 500

Query: 121 ----FLGIEKQKEDTESLLTDDGKDQSEREDETIFGNSDEEAASSMVGDSESGAHEVDKK 180
               F GIE+QKEDTES +TDDGKD SERED++ F +SDEEAA SM GDSESGAHEVDKK
Sbjct: 501 ATTTFSGIEEQKEDTESQVTDDGKDNSEREDDSFFESSDEEAALSMTGDSESGAHEVDKK 560

Query: 181 AGEFIAKFREQIHLQRMASADKRLRGGWGSFSSTSSSHFS 203
           AGEFIAKFREQI LQRMAS DKRLRGGWGSFSST+SS+FS
Sbjct: 561 AGEFIAKFREQIQLQRMASVDKRLRGGWGSFSSTTSSYFS 600

[Close]

BLAST of Cp4.1LG17g10450.1 vs. ExPASy TrEMBL
Match: A0A6J1H4M0 (uncharacterized protein LOC111459998 OS=Cucurbita moschata OX=3662 GN=LOC111459998 PE=4 SV=1)

HSP 1 Score: 249 bits (636), Expect = 2.55e-76
Identity = 146/222 (65.77%), Postives = 169/222 (76.13%), Query Frame = 0


Query: 3   SLSENSRGGSEDPLIELENSSDCNGSIASSPHSDRSFASIPKALSRGKSVRTVRANAVTM 62
           SLSENSRG SEDPLIE ENSS+CN S+ SSP SDR+FASIPKALS+GKSVR +RANA  +
Sbjct: 371 SLSENSRGSSEDPLIEQENSSECNESVVSSPRSDRNFASIPKALSQGKSVRRIRANAAAI 430

Query: 63  EETNSQEI-KNQVENDN--------------NTREDGMRHGRPSIVNPNARNPNRLSKTT 122
           E+  +QE+ + QV++D+                REDG   G P +VNPNA N NR  KTT
Sbjct: 431 EDMKAQEMHRKQVKHDDIIGNKFEEGGMSPPYMREDGTGQGWPDVVNPNAGNMNRFPKTT 490

Query: 123 FLGIEKQKEDTESLLTDDGKDQSEREDETIFGNSDEEAASSMVGDSESGAHEVDKKAGEF 182
           FLGI++QKE+TESL+ DD KD SE EDE++F +SDEEA SSM GDSESGA EVDKKAGEF
Sbjct: 491 FLGIKEQKEETESLVADDSKDDSEGEDESLFASSDEEAGSSMAGDSESGAFEVDKKAGEF 550

Query: 183 IAKFREQIHLQRMASADKRLRGG------WGSFSSTSSSHFS 203
           IAKFREQI LQRMAS +KRLRGG      WGSFSSTSSS+FS
Sbjct: 551 IAKFREQIQLQRMASVEKRLRGGGGGGGGWGSFSSTSSSYFS 592

[Close]

BLAST of Cp4.1LG17g10450.1 vs. ExPASy TrEMBL
Match: A0A5A7T9R9 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00370 PE=4 SV=1)

HSP 1 Score: 246 bits (628), Expect = 8.46e-76
Identity = 152/219 (69.41%), Postives = 169/219 (77.17%), Query Frame = 0


Query: 1   MRSLSENSRGGSEDPLIELENSSDCNGSIASSPHSDRSFASIPKALSRGKSVRTVRANAV 60
           + SLSENSRG SEDPLIE ENSS+CN SI SSP  DR+FA IPKALSRGKSVRT+RAN  
Sbjct: 308 LSSLSENSRGSSEDPLIEPENSSECNESIISSPRLDRNFAHIPKALSRGKSVRTIRANTS 367

Query: 61  TMEETNSQEI-KNQVENDNNT------------REDGMRHGRPSIVNPNARNPNRLSKTT 120
            +EE  +QE+ +NQVE+D+N             REDG  HG P I +PNA   NR  KTT
Sbjct: 368 AIEEMKAQEMYRNQVEHDDNVGNKFEGGMSPYMREDGTGHGWPGINSPNAGYSNRHPKTT 427

Query: 121 -FLGIEKQKEDTESLLTDD-GK-DQSEREDETIFGNSDEEAASSMVGDSESGAHEVDKKA 180
            F GIE+QKED ES LTDD GK D SERED + F +SDEEAASSM G+SESGA+EVDKKA
Sbjct: 428 TFSGIEEQKEDIESQLTDDDGKEDNSEREDVSFFESSDEEAASSMAGESESGAYEVDKKA 487

Query: 181 GEFIAKFREQIHLQRMASADKRLRGGWGSFSSTSSSHFS 203
           GEFIAKFREQI LQRMAS DKRLRGGWGSFSSTSSS+FS
Sbjct: 488 GEFIAKFREQIQLQRMASVDKRLRGGWGSFSSTSSSYFS 526

[Close]

BLAST of Cp4.1LG17g10450.1 vs. TAIR 10
Match: AT3G60380.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G16790.1); Has 6102 Blast hits to 3981 proteins in 424 species: Archae - 6; Bacteria - 372; Metazoa - 2603; Fungi - 655; Plants - 291; Viruses - 28; Other Eukaryotes - 2147 (source: NCBI BLink). )

HSP 1 Score: 53.5 bits (127), Expect = 2.3e-07
Identity = 53/164 (32.32%), Postives = 79/164 (48.17%), Query Frame = 0


Query: 37  RSFASIPKALSRGKSVRTVRANAVTMEETNSQEIKNQVENDNNTREDGMRHGRPSIVNPN 96
           RS+ +      RGKSVRT+R          S      V+ D ++ ED       S     
Sbjct: 588 RSWRASSNVSLRGKSVRTIR----------SDRHGKDVKTDGDSSEDRAEAKVESRGRTK 647

Query: 97  ARNPNRLSKTTFLGIEKQKEDTESLLTDD---GKDQSEREDETIFGNSDEEAASSMVGDS 156
           +R P +   +  L  EK  E       ++    + Q+E++ E  F   +EEAA     ++
Sbjct: 648 SRRPRQEELSIVLHQEKSSETRAKSEPEEVAMEEPQAEQQPEVTF-EEEEEAAWESQSNA 707

Query: 157 ESGAHEVDKKAGEFIAKFREQIHLQRMASADKRLRGGWGSFSST 198
               +EVD+KAGEFIAKFREQI LQ++ S ++   GG G F ++
Sbjct: 708 SHDHNEVDRKAGEFIAKFREQIRLQKLISGEQPRGGGTGIFRNS 740

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g10450.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG17g10450.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023514317.1	7.85e-127	100.00	uncharacterized protein LOC111778619 [Cucurbita pepo subsp. pepo]	[more]
KAG6592930.1	2.73e-119	95.57	hypothetical protein SDJN03_12406, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022960399.1	3.10e-118	94.58	uncharacterized protein LOC111461136 [Cucurbita moschata]	[more]
KAG7025338.1	3.10e-118	94.58	hypothetical protein SDJN02_11833, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023004887.1	5.70e-112	92.61	uncharacterized protein LOC111498067 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG17g10450.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAX3	1.50e-118	94.58	uncharacterized protein LOC111461136 OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]
A0A6J1KRM7	2.76e-112	92.61	uncharacterized protein LOC111498067 OS=Cucurbita maxima OX=3661 GN=LOC111498067...	[more]
A0A0A0K9X1	3.91e-77	67.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G103540 PE=4 SV=1	[more]
A0A6J1H4M0	2.55e-76	65.77	uncharacterized protein LOC111459998 OS=Cucurbita moschata OX=3662 GN=LOC1114599...	[more]
A0A5A7T9R9	8.46e-76	69.41	DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]

BLAST of Cp4.1LG17g10450.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60380.1	2.3e-07	32.32	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 159..185 e-value: 3.9E-10 score: 39.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..160
None	No IPR available	PANTHER	PTHR34059:SF6	COTTON FIBER PROTEIN	coord: 20..191
None	No IPR available	PANTHER	PTHR34059	EXPRESSED PROTEIN	coord: 20..191

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG17g10450	Cp4.1LG17g10450	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g10450.1:exon:001	Cp4.1LG17g10450.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g10450.1:cds:001	Cp4.1LG17g10450.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g10450.1	Cp4.1LG17g10450.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane