Cp4.1LG17g10100.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g10100.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	Cp4.1LG17: 7667110 .. 7669765 (+)
Sequence length	1138
RNA-Seq Expression	Cp4.1LG17g10100.1
Synteny	Cp4.1LG17g10100.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATCCATCCATTCAATTTCAATTCAATTCAATCCCATCTCCATTTTGTTCCAATCCAATTCATTTCCTCTCCAATTCATCCAATCCCACCTCCACCTCCACCTCCACCTCCAAATTCCCTCAACATTCATGGCGGATTCGCCACTGAAACCGCCGCTCCAGAGGCCCCCAGGCTACAAGGACCCAAGCGCCTCCGGTAGCTCAGCCTCCATCCCGGTCTCGAAGCCGCCGGCCGCCAGAAACAAGCCCCGTCTCCCGACCTCGTACAAGCCGAAGAAGAGGAAAAGCAGCTGCTGCAGGCTCTGCTGCTGCGTGTTCTGTTTCCTAATCCTGTTCCTGATCGTGGTGGTGTCCCTCGCCGGCGCCCTGTTCTACCTGATCTTCGACCCCAAGCTTCCCCTGTTCCACCTCCTCGCCTTCCGCATCTCCTCCTTCAAGGTCGCCCCGACCCCCGACGGGTCCTACCTGGACGCCCAGGTGTCCATCCGGGTGGAGTTCAAGAACCCCAACGACAAGCTGGCGATCAAGTACGGGAAGATCGAGTACGACGTGATGGTGGGGCAGGCGGCGGAGTTCGGGCAGCGGGAGCTGCAGGGGTTCACGCAGGGGAGGCGGAGCACGACGACGGTGAAGGCGGACTCCGGGGTGAAGGGGAAGATGCTGGGGGTGGAGGACTCGACGAGGCTGGTGTCCAAGTATCAGAGTAAGGCGATGGAGGTGAAAGTAGAGGCGAGGACGGCGGTGGGCGTGGTGGCTCAAGGCTGGGCGGTGGGTCCCATCCCCGTCAAATTGGATTGCGAGTCTAAATTGAAGAATATTGAGGCCGGTGATATGCCTACATGCAATATCAATCTACTTAGATGGTATGTTCTTCCTCCCCTTTTTTTTTTCTTTTTAATTATTATTATTGTTGGAGGTTCAAAGTCCCACGTCTCCTTAATTTAAGGAATAATCATGTGTTTATAATCAAGTAATATCATGTGTTTATAATCAAGTAATATCATGTGTTTATAATCAAGTAATATCTCCCCATTGGTATGAGGCTTTCGAGGAAGCCCAAAGCAAAGCCATAAGTGCCTATACTCAAAGTGGACAGTATCGTACCATTGTGGCATGAGAGCCTAGACAGTATCGTACCATTGTGGCATGAGAGCCTAGACAGTATCGTACCATTGTGGCATGAGAGCCTAGACAGTATCGTACCATTGTGGCATGAGAGCCTAGACAGTATCGTACCATTGTGGCATGAGAGCCTAGACAGTATCGTACCATTGTGGCATGAGAGCCTAGACAGTATCGTACCATTGTGGCATGAGAGCCTAGACAGGCATGAGAGCCTATGCTCAAAGTGGACAGTATCATACCATTGTTGAGAGTGGCATGAGAGCCTATGCTCAAAGTGGACAGTATCATACCATTGTTGAGAGTGGCATGAGAGCCTATGCTCAAAGTGGACAATATCATACTATTGTTGAGAGTGACATGAGAGCTCAAAATGGGTAGATAGGCTCTCACAGTACCATTGTGGCATGAGAGCCTAGGCCCAAAGTGGACAGTACCATTGTGGCATGAGAGCCTAGGCCCAAAGTGGACAGTACCATTGTGGCATGAGAGCCTAGGCCCAAAGTGGACAGTACCATTGTGGCATGAGAGCCTAGGCCCAAAGTGGACAGTACCATTGTGGCATGAGAGCCTAGGCCCAAAGTGGACAGTACCATTGTGGCATGAGAGCCTAGGCCCAAAGTGGACAGTACCATTGTGGCATGAGAGCCTAGGCCCAAAGTGGACAGTACCATTGTGGCATGAGAGCCTAGGCCCAAAGTGGACAGTACCATTGTGGCATGAGAGCCTAGGCCCAAAGTGGACAGTACCATTGTGGCATGAGAGCCTAGGCCCAAAGTGGACAGTACCATTGTGGCATGAGAGCCTAGGCCCAAAGTGGACAGTACCATTGTGGCATGAGAGCCTAGGCCCAAAGTGGACAGTACCATTGTGGCATGAGAGCCTAGGCTCAAAGTGGACAGTACCATTGTAGCATGAGAGCCTAGGCTCAAAGTGGACAGTACCATTGTAGCATGAGAGCTTAGGCTCAAAGTGAACAGTACCATTGTAGCATGAGAGCCTAAGCTCAAAGTGGACAGTACCATACTATTTCGTTGGTGTAACAATTATAATTATTATTTCCATTCTTTTTAATTATTTTGGATTAAAAACATCTTACTTAAATATTTTAAATATTAAATTTATAGAGATGTTTTTCCTTTTTTAAATTATATTAAAAATATTCTTAATTAATATAAAATATTTTGAATAAGGGAATAATGGTATATATTTTTTATTGCAGGATCAATATACGTGGATGAGGTTGCAATTGCTCGGAAGTCAATTATATTATATTATTTATTTTTATTGGGTTGAATATTTTATTGGAACTTTTTTCTTTTTTTCCTTTTTTTAATCGAATTAATTTTTCTTAAATATTACGACTTTAGAACGTCAAATAATTCTTTGACTAAATATATATTTGTTCTAAGTGTGAAATATAATGAAAAAAAAGGAAAAAAAAAAAAGAAAAAAAAAAGAGGGTTTCATTTAATTTGTACTAATATAAAGGGTGTTTATATTATTGTGATTATAATGTAAAGACAATGTAATT

mRNA sequence

CCATCCATCCATTCAATTTCAATTCAATTCAATCCCATCTCCATTTTGTTCCAATCCAATTCATTTCCTCTCCAATTCATCCAATCCCACCTCCACCTCCACCTCCACCTCCAAATTCCCTCAACATTCATGGCGGATTCGCCACTGAAACCGCCGCTCCAGAGGCCCCCAGGCTACAAGGACCCAAGCGCCTCCGGTAGCTCAGCCTCCATCCCGGTCTCGAAGCCGCCGGCCGCCAGAAACAAGCCCCGTCTCCCGACCTCGTACAAGCCGAAGAAGAGGAAAAGCAGCTGCTGCAGGCTCTGCTGCTGCGTGTTCTGTTTCCTAATCCTGTTCCTGATCGTGGTGGTGTCCCTCGCCGGCGCCCTGTTCTACCTGATCTTCGACCCCAAGCTTCCCCTGTTCCACCTCCTCGCCTTCCGCATCTCCTCCTTCAAGGTCGCCCCGACCCCCGACGGGTCCTACCTGGACGCCCAGGTGTCCATCCGGGTGGAGTTCAAGAACCCCAACGACAAGCTGGCGATCAAGTACGGGAAGATCGAGTACGACGTGATGGTGGGGCAGGCGGCGGAGTTCGGGCAGCGGGAGCTGCAGGGGTTCACGCAGGGGAGGCGGAGCACGACGACGGTGAAGGCGGACTCCGGGGTGAAGGGGAAGATGCTGGGGGTGGAGGACTCGACGAGGCTGGTGTCCAAGTATCAGAGTAAGGCGATGGAGGTGAAAGTAGAGGCGAGGACGGCGGTGGGCGTGGTGGCTCAAGGCTGGGCGGTGGGTCCCATCCCCGTCAAATTGGATTGCGAGTCTAAATTGAAGAATATTGAGGCCGGATCAATATACGTGGATGAGGTTGCAATTGCTCGGAAGTCAATTATATTATATTATTTATTTTTATTGGGTTGAATATTTTATTGGAACTTTTTTCTTTTTTTCCTTTTTTTAATCGAATTAATTTTTCTTAAATATTACGACTTTAGAACGTCAAATAATTCTTTGACTAAATATATATTTGTTCTAAGTGTGAAATATAATGAAAAAAAAGGAAAAAAAAAAAAGAAAAAAAAAAGAGGGTTTCATTTAATTTGTACTAATATAAAGGGTGTTTATATTATTGTGATTATAATGTAAAGACAATGTAATT

Coding sequence (CDS)

CCATCCATCCATTCAATTTCAATTCAATTCAATCCCATCTCCATTTTGTTCCAATCCAATTCATTTCCTCTCCAATTCATCCAATCCCACCTCCACCTCCACCTCCACCTCCAAATTCCCTCAACATTCATGGCGGATTCGCCACTGAAACCGCCGCTCCAGAGGCCCCCAGGCTACAAGGACCCAAGCGCCTCCGGTAGCTCAGCCTCCATCCCGGTCTCGAAGCCGCCGGCCGCCAGAAACAAGCCCCGTCTCCCGACCTCGTACAAGCCGAAGAAGAGGAAAAGCAGCTGCTGCAGGCTCTGCTGCTGCGTGTTCTGTTTCCTAATCCTGTTCCTGATCGTGGTGGTGTCCCTCGCCGGCGCCCTGTTCTACCTGATCTTCGACCCCAAGCTTCCCCTGTTCCACCTCCTCGCCTTCCGCATCTCCTCCTTCAAGGTCGCCCCGACCCCCGACGGGTCCTACCTGGACGCCCAGGTGTCCATCCGGGTGGAGTTCAAGAACCCCAACGACAAGCTGGCGATCAAGTACGGGAAGATCGAGTACGACGTGATGGTGGGGCAGGCGGCGGAGTTCGGGCAGCGGGAGCTGCAGGGGTTCACGCAGGGGAGGCGGAGCACGACGACGGTGAAGGCGGACTCCGGGGTGAAGGGGAAGATGCTGGGGGTGGAGGACTCGACGAGGCTGGTGTCCAAGTATCAGAGTAAGGCGATGGAGGTGAAAGTAGAGGCGAGGACGGCGGTGGGCGTGGTGGCTCAAGGCTGGGCGGTGGGTCCCATCCCCGTCAAATTGGATTGCGAGTCTAAATTGAAGAATATTGAGGCCGGATCAATATACGTGGATGAGGTTGCAATTGCTCGGAAGTCAATTATATTATATTATTTATTTTTATTGGGTTGA

Protein sequence

PSIHSISIQFNPISILFQSNSFPLQFIQSHLHLHLHLQIPSTFMADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGSIYVDEVAIARKSIILYYLFLLG

Homology

[Close]

BLAST of Cp4.1LG17g10100.1 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.7e-09
Identity = 49/156 (31.41%), Postives = 71/156 (45.51%), Query Frame = 0


Query: 55  RPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCCVFCFLILFLI 114
           RP     P  S  S     SK P  +   R      PKKR+S CCR  C  FCFL+L L+
Sbjct: 19  RPTAPLVPRGSSRSEHGDPSKVPLNQRPQRFVPLAPPKKRRSCCCRCFCYTFCFLLL-LV 78

Query: 115 VVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIRVEFKNPNDKLA 174
           V V  +  + YL+F PKLP + +   +++ F +      S L    ++ +  KNPN+K+ 
Sbjct: 79  VAVGASIGILYLVFKPKLPDYSIDRLQLTRFAL---NQDSSLTTAFNVTITAKNPNEKIG 138

Query: 175 IKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTV 211
           I Y       +     +     L  F QG  +TT +
Sbjct: 139 IYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVI 170

[Close]

BLAST of Cp4.1LG17g10100.1 vs. NCBI nr
Match: XP_023005046.1 (NDR1/HIN1-like protein 13 [Cucurbita maxima])

HSP 1 Score: 505 bits (1300), Expect = 3.14e-178
Identity = 265/276 (96.01%), Postives = 266/276 (96.38%), Query Frame = 0


Query: 5   SISIQFN--PISILFQSNSFPLQFIQSHLHL--HLHLQIPSTFMADSPLKPPLQRPPGYK 64
           SI  QFN  P  ILFQSNSFPLQFIQSHLHL  HLHLQIPSTFMADSPLKPPLQRPPGYK
Sbjct: 42  SIQFQFNSIPYYILFQSNSFPLQFIQSHLHLYLHLHLQIPSTFMADSPLKPPLQRPPGYK 101

Query: 65  DPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCCVFCFLILFLIVVVSLA 124
           DPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCCVFCFLILFLIVVVSLA
Sbjct: 102 DPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCCVFCFLILFLIVVVSLA 161

Query: 125 GALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIRVEFKNPNDKLAIKYGKI 184
           GALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIRVEFKNPNDKLAI+YGKI
Sbjct: 162 GALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIRVEFKNPNDKLAIRYGKI 221

Query: 185 EYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGVEDSTRLVSKYQSKAMEV 244
           EYDVMVGQAAEFGQRELQGFTQ RRSTTTVKADSGVKGKMLGVEDSTRLVSKYQSKAMEV
Sbjct: 222 EYDVMVGQAAEFGQRELQGFTQARRSTTTVKADSGVKGKMLGVEDSTRLVSKYQSKAMEV 281

Query: 245 KVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAG 276
           KVEARTAVGVVAQGWAVGPI VKLDCESKLKNIEAG
Sbjct: 282 KVEARTAVGVVAQGWAVGPISVKLDCESKLKNIEAG 317

[Close]

BLAST of Cp4.1LG17g10100.1 vs. NCBI nr
Match: XP_022960198.1 (NDR1/HIN1-like protein 6 [Cucurbita moschata] >XP_023515084.1 NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 454 bits (1167), Expect = 2.70e-159
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 44  MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 103
           MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC
Sbjct: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60

Query: 104 CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 163
           CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR
Sbjct: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120

Query: 164 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 223
           VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV
Sbjct: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180

Query: 224 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAG 276
           EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAG
Sbjct: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAG 233

[Close]

BLAST of Cp4.1LG17g10100.1 vs. NCBI nr
Match: KAG6592899.1 (NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 454 bits (1167), Expect = 9.09e-158
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 44  MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 103
           MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC
Sbjct: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60

Query: 104 CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 163
           CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR
Sbjct: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120

Query: 164 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 223
           VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV
Sbjct: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180

Query: 224 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAG 276
           EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAG
Sbjct: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAG 233

[Close]

BLAST of Cp4.1LG17g10100.1 vs. NCBI nr
Match: KAG7025304.1 (NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 454 bits (1167), Expect = 3.84e-157
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 44  MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 103
           MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC
Sbjct: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60

Query: 104 CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 163
           CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR
Sbjct: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120

Query: 164 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 223
           VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV
Sbjct: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180

Query: 224 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAG 276
           EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAG
Sbjct: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAG 233

[Close]

BLAST of Cp4.1LG17g10100.1 vs. NCBI nr
Match: XP_008445748.1 (PREDICTED: uncharacterized protein LOC103488682 [Cucumis melo])

HSP 1 Score: 358 bits (920), Expect = 1.18e-121
Identity = 183/247 (74.09%), Postives = 209/247 (84.62%), Query Frame = 0


Query: 44  MADSPLKPPLQRPPGYKD---PSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCR 103
           MAD P+KPPLQ+PPGYKD    + S SSAS     PP  R+KPRLP+SYKPKKRK +CCR
Sbjct: 1   MADLPMKPPLQKPPGYKDHHTAATSSSSASTVTHLPPPPRSKPRLPSSYKPKKRKRNCCR 60

Query: 104 LCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQV 163
            CCC+FCFLILFLIVV +LA ALFYLI+DPKLP+FHLLAFRIS+FKV+ TPDGS+LDAQV
Sbjct: 61  TCCCIFCFLILFLIVVAALALALFYLIYDPKLPVFHLLAFRISTFKVSATPDGSFLDAQV 120

Query: 164 SIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKM 223
           SIRVEFKNPNDKL+IKYGKIEYDVMVGQA EFG+REL GFTQ RRSTTTVKA++ VK KM
Sbjct: 121 SIRVEFKNPNDKLSIKYGKIEYDVMVGQATEFGRRELAGFTQDRRSTTTVKAEAAVKNKM 180

Query: 224 LGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGSIYV 283
           L VED  RL+SK+QSKA+EVKVEA TAVGVV QGW +GPI VKLDCE+KLKNIE G + +
Sbjct: 181 LAVEDGARLLSKFQSKALEVKVEAETAVGVVIQGWGLGPITVKLDCETKLKNIEGGDMPI 240

Query: 284 DEVAIAR 287
             + + R
Sbjct: 241 CNINLLR 247

[Close]

BLAST of Cp4.1LG17g10100.1 vs. ExPASy TrEMBL
Match: A0A6J1KTU7 (NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111498155 PE=4 SV=1)

HSP 1 Score: 505 bits (1300), Expect = 1.52e-178
Identity = 265/276 (96.01%), Postives = 266/276 (96.38%), Query Frame = 0


Query: 5   SISIQFN--PISILFQSNSFPLQFIQSHLHL--HLHLQIPSTFMADSPLKPPLQRPPGYK 64
           SI  QFN  P  ILFQSNSFPLQFIQSHLHL  HLHLQIPSTFMADSPLKPPLQRPPGYK
Sbjct: 42  SIQFQFNSIPYYILFQSNSFPLQFIQSHLHLYLHLHLQIPSTFMADSPLKPPLQRPPGYK 101

Query: 65  DPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCCVFCFLILFLIVVVSLA 124
           DPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCCVFCFLILFLIVVVSLA
Sbjct: 102 DPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCCVFCFLILFLIVVVSLA 161

Query: 125 GALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIRVEFKNPNDKLAIKYGKI 184
           GALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIRVEFKNPNDKLAI+YGKI
Sbjct: 162 GALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIRVEFKNPNDKLAIRYGKI 221

Query: 185 EYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGVEDSTRLVSKYQSKAMEV 244
           EYDVMVGQAAEFGQRELQGFTQ RRSTTTVKADSGVKGKMLGVEDSTRLVSKYQSKAMEV
Sbjct: 222 EYDVMVGQAAEFGQRELQGFTQARRSTTTVKADSGVKGKMLGVEDSTRLVSKYQSKAMEV 281

Query: 245 KVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAG 276
           KVEARTAVGVVAQGWAVGPI VKLDCESKLKNIEAG
Sbjct: 282 KVEARTAVGVVAQGWAVGPISVKLDCESKLKNIEAG 317

[Close]

BLAST of Cp4.1LG17g10100.1 vs. ExPASy TrEMBL
Match: A0A6J1H856 (NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111461008 PE=4 SV=1)

HSP 1 Score: 454 bits (1167), Expect = 1.30e-159
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 44  MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 103
           MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC
Sbjct: 1   MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 60

Query: 104 CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 163
           CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR
Sbjct: 61  CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 120

Query: 164 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 223
           VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV
Sbjct: 121 VEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKMLGV 180

Query: 224 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAG 276
           EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAG
Sbjct: 181 EDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAG 233

[Close]

BLAST of Cp4.1LG17g10100.1 vs. ExPASy TrEMBL
Match: A0A1S3BDG3 (uncharacterized protein LOC103488682 OS=Cucumis melo OX=3656 GN=LOC103488682 PE=4 SV=1)

HSP 1 Score: 358 bits (920), Expect = 5.70e-122
Identity = 183/247 (74.09%), Postives = 209/247 (84.62%), Query Frame = 0


Query: 44  MADSPLKPPLQRPPGYKD---PSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCR 103
           MAD P+KPPLQ+PPGYKD    + S SSAS     PP  R+KPRLP+SYKPKKRK +CCR
Sbjct: 1   MADLPMKPPLQKPPGYKDHHTAATSSSSASTVTHLPPPPRSKPRLPSSYKPKKRKRNCCR 60

Query: 104 LCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQV 163
            CCC+FCFLILFLIVV +LA ALFYLI+DPKLP+FHLLAFRIS+FKV+ TPDGS+LDAQV
Sbjct: 61  TCCCIFCFLILFLIVVAALALALFYLIYDPKLPVFHLLAFRISTFKVSATPDGSFLDAQV 120

Query: 164 SIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKM 223
           SIRVEFKNPNDKL+IKYGKIEYDVMVGQA EFG+REL GFTQ RRSTTTVKA++ VK KM
Sbjct: 121 SIRVEFKNPNDKLSIKYGKIEYDVMVGQATEFGRRELAGFTQDRRSTTTVKAEAAVKNKM 180

Query: 224 LGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGSIYV 283
           L VED  RL+SK+QSKA+EVKVEA TAVGVV QGW +GPI VKLDCE+KLKNIE G + +
Sbjct: 181 LAVEDGARLLSKFQSKALEVKVEAETAVGVVIQGWGLGPITVKLDCETKLKNIEGGDMPI 240

Query: 284 DEVAIAR 287
             + + R
Sbjct: 241 CNINLLR 247

[Close]

BLAST of Cp4.1LG17g10100.1 vs. ExPASy TrEMBL
Match: A0A5D3DEK8 (Protein YLS9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold482G00040 PE=4 SV=1)

HSP 1 Score: 358 bits (920), Expect = 1.15e-121
Identity = 183/247 (74.09%), Postives = 209/247 (84.62%), Query Frame = 0


Query: 44  MADSPLKPPLQRPPGYKD---PSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCR 103
           MAD P+KPPLQ+PPGYKD    + S SSAS     PP  R+KPRLP+SYKPKKRK +CCR
Sbjct: 1   MADLPMKPPLQKPPGYKDHHTAATSSSSASTVTHLPPPPRSKPRLPSSYKPKKRKRNCCR 60

Query: 104 LCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQV 163
            CCC+FCFLILFLIVV +LA ALFYLI+DPKLP+FHLLAFRIS+FKV+ TPDGS+LDAQV
Sbjct: 61  TCCCIFCFLILFLIVVAALALALFYLIYDPKLPVFHLLAFRISTFKVSATPDGSFLDAQV 120

Query: 164 SIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKM 223
           SIRVEFKNPNDKL+IKYGKIEYDVMVGQA EFG+REL GFTQ RRSTTTVKA++ VK KM
Sbjct: 121 SIRVEFKNPNDKLSIKYGKIEYDVMVGQATEFGRRELAGFTQDRRSTTTVKAEAAVKNKM 180

Query: 224 LGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAGSIYV 283
           L VED  RL+SK+QSKA+EVKVEA TAVGVV QGW +GPI VKLDCE+KLKNIE G + +
Sbjct: 181 LAVEDGARLLSKFQSKALEVKVEAETAVGVVIQGWGLGPITVKLDCETKLKNIEGGDMPI 240

Query: 284 DEVAIAR 287
             + + R
Sbjct: 241 CNINLLR 247

[Close]

BLAST of Cp4.1LG17g10100.1 vs. ExPASy TrEMBL
Match: A0A0A0KCD8 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042460 PE=4 SV=1)

HSP 1 Score: 350 bits (899), Expect = 8.87e-119
Identity = 179/236 (75.85%), Postives = 201/236 (85.17%), Query Frame = 0


Query: 44  MADSPLKPPLQRPPGYKD---PSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCR 103
           MAD PLKPPLQ+PPGYKD    + S SSAS     PP  R KPR P+SYKPKKRK +CCR
Sbjct: 1   MADLPLKPPLQKPPGYKDHNTTATSSSSASTATHLPPPLRPKPRPPSSYKPKKRKRNCCR 60

Query: 104 LCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQV 163
            CCC+FCFLILFLIVV +LA ALFYL++DPKLP+FHLLAFRISSFKV+ TPDGS+LD+QV
Sbjct: 61  TCCCIFCFLILFLIVVAALALALFYLLYDPKLPVFHLLAFRISSFKVSTTPDGSFLDSQV 120

Query: 164 SIRVEFKNPNDKLAIKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTVKADSGVKGKM 223
           SIRVEFKNPN+KL+IKYGKIEYDV VGQA EFG+REL GFTQGRRSTTTVKA++ VK KM
Sbjct: 121 SIRVEFKNPNEKLSIKYGKIEYDVTVGQATEFGRRELAGFTQGRRSTTTVKAEAAVKNKM 180

Query: 224 LGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDCESKLKNIEAG 276
           L VED  RL+SK+QSKA+EVKVEA T VGVV QGW +GPI VKLDCESKLKNI+ G
Sbjct: 181 LAVEDGGRLLSKFQSKALEVKVEAETEVGVVVQGWGLGPITVKLDCESKLKNIDGG 236

[Close]

BLAST of Cp4.1LG17g10100.1 vs. TAIR 10
Match: AT2G46300.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 171.0 bits (432), Expect = 1.4e-42
Identity = 93/226 (41.15%), Postives = 134/226 (59.29%), Query Frame = 0


Query: 44  MADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCC 103
           MAD  + P LQ+PPGY+DP+ S      P  +    R    +PTSY+PKK++ SCCR CC
Sbjct: 1   MADYQMNPVLQKPPGYRDPNMSSPPPPPPPIQQQPMRKAVPMPTSYRPKKKRRSCCRFCC 60

Query: 104 CVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIR 163
           C  C  ++  I ++ +  A+FYL FDPKLP F L +FR+  FK+A  PDG+ L A    R
Sbjct: 61  CCICITLVLFIFLLLVGTAVFYLWFDPKLPTFSLASFRLDGFKLADDPDGASLSATAVAR 120

Query: 164 VEFKNPNDKLAIKYGKIEYDVMVGQAAE---FGQRELQGFTQGRRSTTTVKADSGVKGKM 223
           VE KNPN KL   YG    D+ VG   +    G+  + GF QG +++T+VK ++ VK ++
Sbjct: 121 VEMKNPNSKLVFYYGNTAVDLSVGSGNDETGMGETTMNGFRQGPKNSTSVKVETTVKNQL 180

Query: 224 LGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDC 267
           +    + RL +K+QSK + + V A+T VG+   G  +G + V L C
Sbjct: 181 VERGLAKRLAAKFQSKDLVINVVAKTKVGLGVGGIKIGMLAVNLRC 226

[Close]

BLAST of Cp4.1LG17g10100.1 vs. TAIR 10
Match: AT4G01110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01453.1); Has 273 Blast hits to 272 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 106.3 bits (264), Expect = 4.3e-23
Identity = 76/232 (32.76%), Postives = 125/232 (53.88%), Query Frame = 0


Query: 49  LKPPLQRPPGYKD-------PSASGSSASIPVSKPPAARNKPRLPTSYKP-KKRKSSCCR 108
           LKP LQ+PPGY++       P  S SS+S  + +PP    K  +P ++ P KKR+ S CR
Sbjct: 7   LKPVLQKPPGYRELHSQPQTPLGSSSSSSSMLRRPP----KHAIPAAFYPTKKRQWSRCR 66

Query: 109 LCCCVFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDG---SYLD 168
           + CC  C  +  +I+++ L  ++F+L + P+LP+  L +FR+S+F  +    G   S L 
Sbjct: 67  VFCCCVCITVAIVILLLILTVSVFFLYYSPRLPVVRLSSFRVSNFNFSGGKAGDGLSQLT 126

Query: 169 AQVSIRVEFKNPNDKLAIKYGKIEYDVMVGQ---AAEFGQRELQGFTQGRRSTTTVKADS 228
           A+ + R++F+NPN KL   YG ++  V VG+       G  +++GF +   + T V    
Sbjct: 127 AEATARLDFRNPNGKLRYYYGNVDVAVSVGEDDFETSLGSTKVKGFVEKPGNRTVVIVPI 186

Query: 229 GVKGKMLGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDC 267
            VK + +      RL +  +SK + VKV A+T VG+      +  + V + C
Sbjct: 187 KVKKQQVDDPTVKRLRADMKSKKLVVKVMAKTKVGLGVGRRKIVTVGVTISC 234

[Close]

BLAST of Cp4.1LG17g10100.1 vs. TAIR 10
Match: AT1G01453.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 103.2 bits (256), Expect = 3.7e-22
Identity = 71/228 (31.14%), Postives = 122/228 (53.51%), Query Frame = 0


Query: 45  ADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCC 104
           A+ PL+P LQ+PPG++D     S+     +  P  R +P  P     KKR+ S CR+ CC
Sbjct: 16  AEKPLQPALQKPPGFRDQQNQPSAPPSGTATLPRRRPRPIHPAD---KKRRCSFCRVFCC 75

Query: 105 VFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVA--PTPDG-SYLDAQVS 164
             C L   +++++ +A A+F+L + PKLP+  L +F+IS+F  +   + DG S+L A  +
Sbjct: 76  CVCILFAVILLLILIAVAVFFLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSADTT 135

Query: 165 IRVEFKNPNDKLAIKYGKIEYDVMVGQ---AAEFGQRELQGFTQGRRSTTTVKADSGVKG 224
             ++F+NPN KL   YG  +  V++G+          +++GF +   + T V   + V+ 
Sbjct: 136 SVLDFRNPNGKLTFYYGDTDVAVILGEKDFETNLESTKVKGFIEKPGNRTAVIVPTTVRK 195

Query: 225 KMLGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDC 267
           + +    + RL  + +SK + V V A+T VG+      +  + V L C
Sbjct: 196 RQVDDPTAKRLQVELKSKKLLVTVTAKTKVGLAVGSRKIVTVGVSLRC 240

[Close]

BLAST of Cp4.1LG17g10100.1 vs. TAIR 10
Match: AT1G01453.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 103.2 bits (256), Expect = 3.7e-22
Identity = 71/228 (31.14%), Postives = 122/228 (53.51%), Query Frame = 0


Query: 45  ADSPLKPPLQRPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCC 104
           A+ PL+P LQ+PPG++D     S+     +  P  R +P  P     KKR+ S CR+ CC
Sbjct: 16  AEKPLQPALQKPPGFRDQQNQPSAPPSGTATLPRRRPRPIHPAD---KKRRCSFCRVFCC 75

Query: 105 VFCFLILFLIVVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVA--PTPDG-SYLDAQVS 164
             C L   +++++ +A A+F+L + PKLP+  L +F+IS+F  +   + DG S+L A  +
Sbjct: 76  CVCILFAVILLLILIAVAVFFLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSADTT 135

Query: 165 IRVEFKNPNDKLAIKYGKIEYDVMVGQ---AAEFGQRELQGFTQGRRSTTTVKADSGVKG 224
             ++F+NPN KL   YG  +  V++G+          +++GF +   + T V   + V+ 
Sbjct: 136 SVLDFRNPNGKLTFYYGDTDVAVILGEKDFETNLESTKVKGFIEKPGNRTAVIVPTTVRK 195

Query: 225 KMLGVEDSTRLVSKYQSKAMEVKVEARTAVGVVAQGWAVGPIPVKLDC 267
           + +    + RL  + +SK + V V A+T VG+      +  + V L C
Sbjct: 196 RQVDDPTAKRLQVELKSKKLLVTVTAKTKVGLAVGSRKIVTVGVSLRC 240

[Close]

BLAST of Cp4.1LG17g10100.1 vs. TAIR 10
Match: AT1G65690.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 62.8 bits (151), Expect = 5.5e-10
Identity = 49/156 (31.41%), Postives = 71/156 (45.51%), Query Frame = 0


Query: 55  RPPGYKDPSASGSSASIPVSKPPAARNKPRLPTSYKPKKRKSSCCRLCCCVFCFLILFLI 114
           RP     P  S  S     SK P  +   R      PKKR+S CCR  C  FCFL+L L+
Sbjct: 19  RPTAPLVPRGSSRSEHGDPSKVPLNQRPQRFVPLAPPKKRRSCCCRCFCYTFCFLLL-LV 78

Query: 115 VVVSLAGALFYLIFDPKLPLFHLLAFRISSFKVAPTPDGSYLDAQVSIRVEFKNPNDKLA 174
           V V  +  + YL+F PKLP + +   +++ F +      S L    ++ +  KNPN+K+ 
Sbjct: 79  VAVGASIGILYLVFKPKLPDYSIDRLQLTRFAL---NQDSSLTTAFNVTITAKNPNEKIG 138

Query: 175 IKYGKIEYDVMVGQAAEFGQRELQGFTQGRRSTTTV 211
           I Y       +     +     L  F QG  +TT +
Sbjct: 139 IYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVI 170

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g10100.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LD98	7.7e-09	31.41	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]

BLAST of Cp4.1LG17g10100.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005046.1	3.14e-178	96.01	NDR1/HIN1-like protein 13 [Cucurbita maxima]	[more]
XP_022960198.1	2.70e-159	100.00	NDR1/HIN1-like protein 6 [Cucurbita moschata] >XP_023515084.1 NDR1/HIN1-like pro...	[more]
KAG6592899.1	9.09e-158	100.00	NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7025304.1	3.84e-157	100.00	NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008445748.1	1.18e-121	74.09	PREDICTED: uncharacterized protein LOC103488682 [Cucumis melo]	[more]

BLAST of Cp4.1LG17g10100.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KTU7	1.52e-178	96.01	NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111498155 PE=4 SV=1	[more]
A0A6J1H856	1.30e-159	100.00	NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111461008 PE=4 SV=1	[more]
A0A1S3BDG3	5.70e-122	74.09	uncharacterized protein LOC103488682 OS=Cucumis melo OX=3656 GN=LOC103488682 PE=...	[more]
A0A5D3DEK8	1.15e-121	74.09	Protein YLS9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KCD8	8.87e-119	75.85	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042460 PE=4 ...	[more]

BLAST of Cp4.1LG17g10100.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46300.1	1.4e-42	41.15	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G01110.1	4.3e-23	32.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G01453.1	3.7e-22	31.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G01453.2	3.7e-22	31.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G65690.1	5.5e-10	31.41	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 164..266 e-value: 1.5E-9 score: 38.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..92
None	No IPR available	PANTHER	PTHR31234:SF35	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 44..268
None	No IPR available	PANTHER	PTHR31234	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 44..268

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG17g10100	Cp4.1LG17g10100	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g10100.1:exon:001	Cp4.1LG17g10100.1:exon:001	exon
Cp4.1LG17g10100.1:exon:002	Cp4.1LG17g10100.1:exon:002	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g10100.1:cds:001	Cp4.1LG17g10100.1:cds:001	CDS
Cp4.1LG17g10100.1:cds:002	Cp4.1LG17g10100.1:cds:002	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g10100.1:three_prime_utr:001	Cp4.1LG17g10100.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g10100.1	Cp4.1LG17g10100.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane