Cp4.1LG17g08680.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g08680.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	VQ motif-containing protein 11-like
Location	Cp4.1LG17: 5075487 .. 5075909 (-)
Sequence length	423
RNA-Seq Expression	Cp4.1LG17g08680.1
Synteny	Cp4.1LG17g08680.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCGCCGCCGCCACCACCGTGCATTCCTCCACCACGACCTTCGTCGAAGCCGACCCATCATCATTCCGAGCAATAGTTCAGAAGCTAACCGGAGCACCTAACGCCCCATCACCGTCGTTTCGTCTGCAGGAGCGGCGGCGGAGTAGCAAGAAGCTGGAGCTGGAGCTGAACGGCGGCGATGGTTTGACAGGGATCGGAATTGGAATCGAAATGGTATCGCCGGTGTCGACTTTGGACTTTGTAGCACGTGGGAATCCTTGTGAAGAGGAAGAGAAGGCGATCGCCGGAAAAGGGTTTTATTTGCACCCAAGTCCGATTAGCCCTCCCGGAGGATCCCAGCCGCCTCGGCTTTTGCCCCTGTTTCCTCTTTCTTCTCCTAGGGACTGTAATTTCAGAAACCATTCTGTTTCTTCTTAA

mRNA sequence

ATGGCCGCCGCCGCCGCCACCACCGTGCATTCCTCCACCACGACCTTCGTCGAAGCCGACCCATCATCATTCCGAGCAATAGTTCAGAAGCTAACCGGAGCACCTAACGCCCCATCACCGTCGTTTCGTCTGCAGGAGCGGCGGCGGAGTAGCAAGAAGCTGGAGCTGGAGCTGAACGGCGGCGATGGTTTGACAGGGATCGGAATTGGAATCGAAATGGTATCGCCGGTGTCGACTTTGGACTTTGTAGCACGTGGGAATCCTTGTGAAGAGGAAGAGAAGGCGATCGCCGGAAAAGGGTTTTATTTGCACCCAAGTCCGATTAGCCCTCCCGGAGGATCCCAGCCGCCTCGGCTTTTGCCCCTGTTTCCTCTTTCTTCTCCTAGGGACTGTAATTTCAGAAACCATTCTGTTTCTTCTTAA

Coding sequence (CDS)

ATGGCCGCCGCCGCCGCCACCACCGTGCATTCCTCCACCACGACCTTCGTCGAAGCCGACCCATCATCATTCCGAGCAATAGTTCAGAAGCTAACCGGAGCACCTAACGCCCCATCACCGTCGTTTCGTCTGCAGGAGCGGCGGCGGAGTAGCAAGAAGCTGGAGCTGGAGCTGAACGGCGGCGATGGTTTGACAGGGATCGGAATTGGAATCGAAATGGTATCGCCGGTGTCGACTTTGGACTTTGTAGCACGTGGGAATCCTTGTGAAGAGGAAGAGAAGGCGATCGCCGGAAAAGGGTTTTATTTGCACCCAAGTCCGATTAGCCCTCCCGGAGGATCCCAGCCGCCTCGGCTTTTGCCCCTGTTTCCTCTTTCTTCTCCTAGGGACTGTAATTTCAGAAACCATTCTGTTTCTTCTTAA

Protein sequence

MAAAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSPSFRLQERRRSSKKLELELNGGDGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLFPLSSPRDCNFRNHSVSS

Homology

[Close]

BLAST of Cp4.1LG17g08680.1 vs. ExPASy Swiss-Prot
Match: Q9M8L3 (VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.0e-20
Identity = 74/160 (46.25%), Postives = 87/160 (54.37%), Query Frame = 0


Query: 14  TTFVEADPSSFRAIVQKLTGAP--------------------NAPSPSFRLQERRRSSKK 73
           T FV+ADPS+FR IVQKLTGAP                        P+F+L ERR+SSKK
Sbjct: 15  TMFVQADPSNFRNIVQKLTGAPPDISSSSFSAVSAAHQKLPLTPKKPAFKLHERRQSSKK 74

Query: 74  LELELNG----GDGLTGIGIGIEMVSPVSTLD-FVAR-----------GNPCEEEEKAIA 133
           +EL++N      D  +    G  +VSPVS LD F AR             P +EE+KAIA
Sbjct: 75  MELKVNNITNPNDAFSHFHRGF-LVSPVSHLDPFWARVSPHSAREEHHAQPDKEEQKAIA 134

Query: 134 GKGFYLHPSPISPPGGSQP-PRLLPLFPLSSPRDCNFRNH 137
            KGFY  PSP S   GS+P P LLPLFPL SP   N R H
Sbjct: 135 EKGFYFLPSPRS---GSEPAPELLPLFPLRSPNGTNHRIH 170

[Close]

BLAST of Cp4.1LG17g08680.1 vs. ExPASy Swiss-Prot
Match: Q9LDZ1 (VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.3e-10
Identity = 61/179 (34.08%), Postives = 78/179 (43.58%), Query Frame = 0


Query: 14  TTFVEADPSSFRAIVQKLTGA-----------PNAPS--------PSFRLQERRRSSKKL 73
           TTFV+AD SSF+ +VQ LTG+           P  PS        P    Q ++ S  KL
Sbjct: 37  TTFVQADSSSFKQVVQMLTGSSSPRSPDSPRPPTTPSGKGNFVIPPIKTAQPKKHSGNKL 96

Query: 74  -ELELNGGDG-------------LTGIGIG---------------------IEMVSPVST 130
            E   +GG               + G G G                     + + SPV+ 
Sbjct: 97  YERRSHGGFNNNLKNSLMINTLMIGGGGAGSPRFSPRNQEILSPSCLDFPKLALNSPVTP 156

[Close]

BLAST of Cp4.1LG17g08680.1 vs. ExPASy Swiss-Prot
Match: Q9FNP0 (VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.7e-09
Identity = 58/158 (36.71%), Postives = 75/158 (47.47%), Query Frame = 0


Query: 8   TVHSSTTTFVEADPSSFRAIVQKLTG---------APNA--------PSPSFRLQERRRS 67
           T     TTFV+ D ++FR IVQ+LTG          P A          P+ +L ERR+ 
Sbjct: 11  TTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSKLHERRQC 70

Query: 68  SK-KLEL-------ELNGGDGLTGIGIGIEMVSPVSTLD------FVARGNP------CE 127
            + KLE+       +  G    +  G    + SPV T         +  G P       E
Sbjct: 71  MRPKLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGEPDSCTTNIE 130

Query: 128 EEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLFPLSSP 129
           EEEKAI  + FYLHPSP S PG ++ P LL LFPL+SP
Sbjct: 131 EEEKAIKERRFYLHPSPRSKPGYTE-PELLTLFPLTSP 167

[Close]

BLAST of Cp4.1LG17g08680.1 vs. ExPASy Swiss-Prot
Match: Q9FHZ3 (VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.1e-09
Identity = 62/193 (32.12%), Postives = 78/193 (40.41%), Query Frame = 0


Query: 14  TTFVEADPSSFRAIVQKLTGAP---------NAPSP-------------------SFRLQ 73
           TTFV+AD S+F+ +VQ LTG+           APSP                   SF+L 
Sbjct: 49  TTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNKGSSFSIPPIKKTNSFKLY 108

Query: 74  ERRRSSKKL---------ELELNGGDGLTGIGIGIE------------------MVSPVS 129
           ERR+++  +          L L     L   G                      ++SP S
Sbjct: 109 ERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSENILLSP-S 168

[Close]

BLAST of Cp4.1LG17g08680.1 vs. ExPASy Swiss-Prot
Match: Q5M750 (VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-08
Identity = 57/182 (31.32%), Postives = 75/182 (41.21%), Query Frame = 0


Query: 14  TTFVEADPSSFRAIVQKLTGAPNAP-------------------SPS------------- 73
           TTFV+AD SSF+ +VQ LTG+   P                   +PS             
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 74  ---------FRLQERRRSSKKLEL-------------------ELNGGDGLTGIGIGIEM 130
                    FRL ERR S K L++                   E+     L    + +  
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSP 176

[Close]

BLAST of Cp4.1LG17g08680.1 vs. NCBI nr
Match: XP_023514799.1 (VQ motif-containing protein 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276 bits (707), Expect = 1.23e-93
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MAAAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSPSFRLQERRRSSKKLELELNG 60
           MAAAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSPSFRLQERRRSSKKLELELNG
Sbjct: 1   MAAAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSPSFRLQERRRSSKKLELELNG 60

Query: 61  GDGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLL 120
           GDGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLL
Sbjct: 61  GDGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLL 120

Query: 121 PLFPLSSPRDCNFRNHSVSS 140
           PLFPLSSPRDCNFRNHSVSS
Sbjct: 121 PLFPLSSPRDCNFRNHSVSS 140

[Close]

BLAST of Cp4.1LG17g08680.1 vs. NCBI nr
Match: KAG6593385.1 (VQ motif-containing protein 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025733.1 VQ motif-containing protein 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 270 bits (691), Expect = 3.26e-91
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 3   AAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSPSFRLQERRRSSKKLELELNGGD 62
           AAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPS SFRLQERRRSSKKLELELNGGD
Sbjct: 2   AAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELNGGD 61

Query: 63  GLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPL 122
           GLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPL
Sbjct: 62  GLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPL 121

Query: 123 FPLSSPRDCNFRNHSVSS 140
           FPLSSPRDCNFRNHSVSS
Sbjct: 122 FPLSSPRDCNFRNHSVSS 139

[Close]

BLAST of Cp4.1LG17g08680.1 vs. NCBI nr
Match: XP_022960160.1 (VQ motif-containing protein 11-like [Cucurbita moschata])

HSP 1 Score: 266 bits (681), Expect = 1.17e-89
Identity = 135/139 (97.12%), Postives = 135/139 (97.12%), Query Frame = 0


Query: 2   AAAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSPSFRLQERRRSSKKLELELNGG 61
           A A A TVHSSTTTFVEADPSSFRAIVQKLTGAPNAPS SFRLQERRRSSKKLELELNGG
Sbjct: 3   ATATAATVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELNGG 62

Query: 62  DGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLP 121
           DGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLP
Sbjct: 63  DGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLP 122

Query: 122 LFPLSSPRDCNFRNHSVSS 140
           LFPLSSPRDCNFRNHSVSS
Sbjct: 123 LFPLSSPRDCNFRNHSVSS 141

[Close]

BLAST of Cp4.1LG17g08680.1 vs. NCBI nr
Match: XP_023004337.1 (VQ motif-containing protein 11-like [Cucurbita maxima])

HSP 1 Score: 263 bits (672), Expect = 3.16e-88
Identity = 133/139 (95.68%), Postives = 135/139 (97.12%), Query Frame = 0


Query: 2   AAAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSPSFRLQERRRSSKKLELELNGG 61
           A A A TVHSSTTTFVEADPSSFRAIVQKLTGAP+APS S+RLQERRRSSKKLELELNGG
Sbjct: 7   AIATAATVHSSTTTFVEADPSSFRAIVQKLTGAPDAPSASYRLQERRRSSKKLELELNGG 66

Query: 62  DGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLP 121
           DGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLP
Sbjct: 67  DGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLP 126

Query: 122 LFPLSSPRDCNFRNHSVSS 140
           LFPLSSPRDCNFRNHSVSS
Sbjct: 127 LFPLSSPRDCNFRNHSVSS 145

[Close]

BLAST of Cp4.1LG17g08680.1 vs. NCBI nr
Match: XP_038897860.1 (VQ motif-containing protein 11-like [Benincasa hispida])

HSP 1 Score: 205 bits (522), Expect = 1.83e-65
Identity = 105/132 (79.55%), Postives = 113/132 (85.61%), Query Frame = 0


Query: 9   VHSSTTTFVEADPSSFRAIVQKLTGAPNAPSPSFRLQERRRSSKKLELELNGGDGLTGIG 68
           VHS+TTTFVEADPS+FRAIVQKLTGAPN P  +FRLQERRRSSKKLELELN G    G  
Sbjct: 10  VHSATTTFVEADPSTFRAIVQKLTGAPNRPPAAFRLQERRRSSKKLELELNSGYTAAG-- 69

Query: 69  IGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLFPLSSP 128
            GI MVSPVSTL+F+ RG+PCEEEE+AIA KGFYLHPSPIS PGGS PP LLPLFPLSSP
Sbjct: 70  -GIGMVSPVSTLEFIGRGSPCEEEERAIAEKGFYLHPSPISTPGGSDPPHLLPLFPLSSP 129

Query: 129 RDCNFRNHSVSS 140
            +CN RNHSVSS
Sbjct: 130 SNCNNRNHSVSS 138

[Close]

BLAST of Cp4.1LG17g08680.1 vs. ExPASy TrEMBL
Match: A0A6J1H8B6 (VQ motif-containing protein 11-like OS=Cucurbita moschata OX=3662 GN=LOC111460985 PE=4 SV=1)

HSP 1 Score: 266 bits (681), Expect = 5.67e-90
Identity = 135/139 (97.12%), Postives = 135/139 (97.12%), Query Frame = 0


Query: 2   AAAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSPSFRLQERRRSSKKLELELNGG 61
           A A A TVHSSTTTFVEADPSSFRAIVQKLTGAPNAPS SFRLQERRRSSKKLELELNGG
Sbjct: 3   ATATAATVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELNGG 62

Query: 62  DGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLP 121
           DGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLP
Sbjct: 63  DGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLP 122

Query: 122 LFPLSSPRDCNFRNHSVSS 140
           LFPLSSPRDCNFRNHSVSS
Sbjct: 123 LFPLSSPRDCNFRNHSVSS 141

[Close]

BLAST of Cp4.1LG17g08680.1 vs. ExPASy TrEMBL
Match: A0A6J1KQ55 (VQ motif-containing protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111497685 PE=4 SV=1)

HSP 1 Score: 263 bits (672), Expect = 1.53e-88
Identity = 133/139 (95.68%), Postives = 135/139 (97.12%), Query Frame = 0


Query: 2   AAAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSPSFRLQERRRSSKKLELELNGG 61
           A A A TVHSSTTTFVEADPSSFRAIVQKLTGAP+APS S+RLQERRRSSKKLELELNGG
Sbjct: 7   AIATAATVHSSTTTFVEADPSSFRAIVQKLTGAPDAPSASYRLQERRRSSKKLELELNGG 66

Query: 62  DGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLP 121
           DGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLP
Sbjct: 67  DGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLP 126

Query: 122 LFPLSSPRDCNFRNHSVSS 140
           LFPLSSPRDCNFRNHSVSS
Sbjct: 127 LFPLSSPRDCNFRNHSVSS 145

[Close]

BLAST of Cp4.1LG17g08680.1 vs. ExPASy TrEMBL
Match: A0A5D3CGZ5 (VQ motif-containing protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001850 PE=4 SV=1)

HSP 1 Score: 201 bits (512), Expect = 3.16e-64
Identity = 102/132 (77.27%), Postives = 115/132 (87.12%), Query Frame = 0


Query: 9   VHSSTTTFVEADPSSFRAIVQKLTGAPNAPSPSFRLQERRRSSKKLELELNGGDGLTGIG 68
           +HS+TTTFVEADPS+FR+IVQKLTGAPN P  ++RLQERRRSSKKLELELN G  + G G
Sbjct: 10  IHSATTTFVEADPSTFRSIVQKLTGAPNHPPAAYRLQERRRSSKKLELELNTGYTVAG-G 69

Query: 69  IGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLFPLSSP 128
           IGI MVSPVSTLDF+  G+PCEEEE+AIA KG+YLHPSPI+ PGGS PP LLPLFPLSSP
Sbjct: 70  IGIGMVSPVSTLDFMGCGSPCEEEERAIAEKGYYLHPSPINTPGGSDPPHLLPLFPLSSP 129

Query: 129 RDCNFRNHSVSS 140
            DCN RN+SVSS
Sbjct: 130 SDCNNRNYSVSS 140

[Close]

BLAST of Cp4.1LG17g08680.1 vs. ExPASy TrEMBL
Match: A0A1S3CF34 (VQ motif-containing protein 11 OS=Cucumis melo OX=3656 GN=LOC103500018 PE=4 SV=1)

HSP 1 Score: 201 bits (512), Expect = 3.16e-64
Identity = 102/132 (77.27%), Postives = 115/132 (87.12%), Query Frame = 0


Query: 9   VHSSTTTFVEADPSSFRAIVQKLTGAPNAPSPSFRLQERRRSSKKLELELNGGDGLTGIG 68
           +HS+TTTFVEADPS+FR+IVQKLTGAPN P  ++RLQERRRSSKKLELELN G  + G G
Sbjct: 10  IHSATTTFVEADPSTFRSIVQKLTGAPNHPPAAYRLQERRRSSKKLELELNTGYTVAG-G 69

Query: 69  IGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLFPLSSP 128
           IGI MVSPVSTLDF+  G+PCEEEE+AIA KG+YLHPSPI+ PGGS PP LLPLFPLSSP
Sbjct: 70  IGIGMVSPVSTLDFMGCGSPCEEEERAIAEKGYYLHPSPINTPGGSDPPHLLPLFPLSSP 129

Query: 129 RDCNFRNHSVSS 140
            DCN RN+SVSS
Sbjct: 130 SDCNNRNYSVSS 140

[Close]

BLAST of Cp4.1LG17g08680.1 vs. ExPASy TrEMBL
Match: A0A0A0K6W6 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432350 PE=4 SV=1)

HSP 1 Score: 195 bits (496), Expect = 8.64e-62
Identity = 101/132 (76.52%), Postives = 113/132 (85.61%), Query Frame = 0


Query: 9   VHSSTTTFVEADPSSFRAIVQKLTGAPNAPSPSFRLQERRRSSKKLELELNGGDGLTGIG 68
           VHSSTTTFVEADPS+FR+IVQKLTGAP+ P  ++RLQERRRSSKKLELELN G   TG G
Sbjct: 10  VHSSTTTFVEADPSTFRSIVQKLTGAPHHPPAAYRLQERRRSSKKLELELNTGYTTTG-G 69

Query: 69  IGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLFPLSSP 128
           IG  MVSPVSTLDF+  G+PCEEEE+AIA KG+YLHPSPI+ PGGS PP LLPLFPLSSP
Sbjct: 70  IGNGMVSPVSTLDFMGCGSPCEEEERAIAEKGYYLHPSPINTPGGSDPPHLLPLFPLSSP 129

Query: 129 RDCNFRNHSVSS 140
            +CN RN+ VSS
Sbjct: 130 SNCNNRNYYVSS 140

[Close]

BLAST of Cp4.1LG17g08680.1 vs. TAIR 10
Match: AT1G80450.1 (VQ motif-containing protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-21
Identity = 74/160 (46.25%), Postives = 87/160 (54.37%), Query Frame = 0


Query: 14  TTFVEADPSSFRAIVQKLTGAP--------------------NAPSPSFRLQERRRSSKK 73
           T FV+ADPS+FR IVQKLTGAP                        P+F+L ERR+SSKK
Sbjct: 15  TMFVQADPSNFRNIVQKLTGAPPDISSSSFSAVSAAHQKLPLTPKKPAFKLHERRQSSKK 74

Query: 74  LELELNG----GDGLTGIGIGIEMVSPVSTLD-FVAR-----------GNPCEEEEKAIA 133
           +EL++N      D  +    G  +VSPVS LD F AR             P +EE+KAIA
Sbjct: 75  MELKVNNITNPNDAFSHFHRGF-LVSPVSHLDPFWARVSPHSAREEHHAQPDKEEQKAIA 134

Query: 134 GKGFYLHPSPISPPGGSQP-PRLLPLFPLSSPRDCNFRNH 137
            KGFY  PSP S   GS+P P LLPLFPL SP   N R H
Sbjct: 135 EKGFYFLPSPRS---GSEPAPELLPLFPLRSPNGTNHRIH 170

[Close]

BLAST of Cp4.1LG17g08680.1 vs. TAIR 10
Match: AT3G15300.1 (VQ motif-containing protein )

HSP 1 Score: 66.2 bits (160), Expect = 2.3e-11
Identity = 61/179 (34.08%), Postives = 78/179 (43.58%), Query Frame = 0


Query: 14  TTFVEADPSSFRAIVQKLTGA-----------PNAPS--------PSFRLQERRRSSKKL 73
           TTFV+AD SSF+ +VQ LTG+           P  PS        P    Q ++ S  KL
Sbjct: 37  TTFVQADSSSFKQVVQMLTGSSSPRSPDSPRPPTTPSGKGNFVIPPIKTAQPKKHSGNKL 96

Query: 74  -ELELNGGDG-------------LTGIGIG---------------------IEMVSPVST 130
            E   +GG               + G G G                     + + SPV+ 
Sbjct: 97  YERRSHGGFNNNLKNSLMINTLMIGGGGAGSPRFSPRNQEILSPSCLDFPKLALNSPVTP 156

[Close]

BLAST of Cp4.1LG17g08680.1 vs. TAIR 10
Match: AT5G08480.1 (VQ motif-containing protein )

HSP 1 Score: 62.8 bits (151), Expect = 2.6e-10
Identity = 53/143 (37.06%), Postives = 69/143 (48.25%), Query Frame = 0


Query: 8   TVHSSTTTFVEADPSSFRAIVQKLTG---------APNA--------PSPSFRLQERRRS 67
           T     TTFV+ D ++FR IVQ+LTG          P A          P+ +L ERR+ 
Sbjct: 11  TTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSKLHERRQC 70

Query: 68  SK-KLELELNGGDGLTGIGIGIEMVSPVSTLDFVARGNPC----EEEEKAIAGKGFYLHP 127
            + KLE+                +  P+S        + C    EEEEKAI  + FYLHP
Sbjct: 71  MRPKLEI----------------VKPPLSFKPTEGEPDSCTTNIEEEEKAIKERRFYLHP 130

Query: 128 SPISPPGGSQPPRLLPLFPLSSP 129
           SP S PG ++ P LL LFPL+SP
Sbjct: 131 SPRSKPGYTE-PELLTLFPLTSP 136

[Close]

BLAST of Cp4.1LG17g08680.1 vs. TAIR 10
Match: AT5G08480.2 (VQ motif-containing protein )

HSP 1 Score: 62.4 bits (150), Expect = 3.4e-10
Identity = 58/158 (36.71%), Postives = 75/158 (47.47%), Query Frame = 0


Query: 8   TVHSSTTTFVEADPSSFRAIVQKLTG---------APNA--------PSPSFRLQERRRS 67
           T     TTFV+ D ++FR IVQ+LTG          P A          P+ +L ERR+ 
Sbjct: 11  TTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSKLHERRQC 70

Query: 68  SK-KLEL-------ELNGGDGLTGIGIGIEMVSPVSTLD------FVARGNP------CE 127
            + KLE+       +  G    +  G    + SPV T         +  G P       E
Sbjct: 71  MRPKLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGEPDSCTTNIE 130

Query: 128 EEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLFPLSSP 129
           EEEKAI  + FYLHPSP S PG ++ P LL LFPL+SP
Sbjct: 131 EEEKAIKERRFYLHPSPRSKPGYTE-PELLTLFPLTSP 167

[Close]

BLAST of Cp4.1LG17g08680.1 vs. TAIR 10
Match: AT5G53830.1 (VQ motif-containing protein )

HSP 1 Score: 61.6 bits (148), Expect = 5.7e-10
Identity = 62/193 (32.12%), Postives = 78/193 (40.41%), Query Frame = 0


Query: 14  TTFVEADPSSFRAIVQKLTGAP---------NAPSP-------------------SFRLQ 73
           TTFV+AD S+F+ +VQ LTG+           APSP                   SF+L 
Sbjct: 49  TTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNKGSSFSIPPIKKTNSFKLY 108

Query: 74  ERRRSSKKL---------ELELNGGDGLTGIGIGIE------------------MVSPVS 129
           ERR+++  +          L L     L   G                      ++SP S
Sbjct: 109 ERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSENILLSP-S 168

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g08680.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M8L3	2.0e-20	46.25	VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1	[more]
Q9LDZ1	3.3e-10	34.08	VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1	[more]
Q9FNP0	4.7e-09	36.71	VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1	[more]
Q9FHZ3	8.1e-09	32.12	VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1	[more]
Q5M750	1.1e-08	31.32	VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1	[more]

BLAST of Cp4.1LG17g08680.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023514799.1	1.23e-93	100.00	VQ motif-containing protein 11-like [Cucurbita pepo subsp. pepo]	[more]
KAG6593385.1	3.26e-91	99.28	VQ motif-containing protein 11, partial [Cucurbita argyrosperma subsp. sororia] ...	[more]
XP_022960160.1	1.17e-89	97.12	VQ motif-containing protein 11-like [Cucurbita moschata]	[more]
XP_023004337.1	3.16e-88	95.68	VQ motif-containing protein 11-like [Cucurbita maxima]	[more]
XP_038897860.1	1.83e-65	79.55	VQ motif-containing protein 11-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG17g08680.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H8B6	5.67e-90	97.12	VQ motif-containing protein 11-like OS=Cucurbita moschata OX=3662 GN=LOC11146098...	[more]
A0A6J1KQ55	1.53e-88	95.68	VQ motif-containing protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111497685 ...	[more]
A0A5D3CGZ5	3.16e-64	77.27	VQ motif-containing protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CF34	3.16e-64	77.27	VQ motif-containing protein 11 OS=Cucumis melo OX=3656 GN=LOC103500018 PE=4 SV=1	[more]
A0A0A0K6W6	8.64e-62	76.52	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432350 PE=4 SV=...	[more]

BLAST of Cp4.1LG17g08680.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80450.1	1.5e-21	46.25	VQ motif-containing protein	[more]
AT3G15300.1	2.3e-11	34.08	VQ motif-containing protein	[more]
AT5G08480.1	2.6e-10	37.06	VQ motif-containing protein	[more]
AT5G08480.2	3.4e-10	36.71	VQ motif-containing protein	[more]
AT5G53830.1	5.7e-10	32.12	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 12..38 e-value: 7.9E-12 score: 44.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..57
None	No IPR available	PANTHER	PTHR33402:SF19	VQ MOTIF-CONTAINING PROTEIN 11	coord: 5..132
IPR039611	VQ motif-containing protein 4/11/13/19/31/33	PANTHER	PTHR33402	VQ MOTIF-CONTAINING PROTEIN 11-LIKE	coord: 5..132

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG17g08680	Cp4.1LG17g08680	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g08680.1:exon:001	Cp4.1LG17g08680.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g08680.1:cds:001	Cp4.1LG17g08680.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g08680.1	Cp4.1LG17g08680.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus