Cp4.1LG15g00300.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g00300.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	F-box/kelch-repeat protein SKIP30
Location	Cp4.1LG15: 192511 .. 193548 (+)
Sequence length	1038
RNA-Seq Expression	Cp4.1LG15g00300.1
Synteny	Cp4.1LG15g00300.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGAATTGATTGACGGTCTCCCAGACGCTGTCGCCCTTAGGTGCCTCGCTCGTGTTCCCTTCCACCTCTATCCAAAGTTGGAGCTTGTTTCTAAATCCTGGCTAGCTGCCATTCGTAGTTCTGAACTTTTTAGAGTTCGACAGGAGATTGGATCATCAGAAGATCTATTATGCGTATGCGCATTTGAACCCGAGAATCTATGGCAGCTTTATGACCCCCTCAGAGACCTTTGGATAACAATTCCTGTACTTCCATCGAGAATTAGGCATCTTGCACACTTTGGTGCCGTCTCCACTGCTGGAAAGTTGTTTGTGCTCGGCGGTGGCAGTGATGACGTTGATCCATTGACTGGTGATCAAGATAGGAACTTTGCAACCAATGAGGTATGGTCATATGATCCTATAATACATCGGTGGTTTCAACGTGCATCGATGCTTGTACCACGTGCCATGTTTGCGTGCTGTGTCTTGGGTGGAAGGATTGTCGTTGCGGGTGGTTTTACTAGCTGCAGAAAATCGATTTCTCAGGCAGAAATGTATGACCCTGATAAAGATGTATGGATTCCACTGCCTGATCTACACCATACTCACAACTCTGCTTGCACAGGGGTAGTGATTGGAGGGAAGTTGCACGTTTTGCACAAGGGGTTATCAACGGTGCAAATTTTCGACGATGTGCAGCTTGAATGGAGAGTTGAAGACTATGGTTGGCTCCAAGGTCCAATGGCTGTTGTCCAGGGTTCACTTTATGTCATGAGCCATGGACATATTTTCAAGCACGATGGAGAAGTGAGGAAGGTTGTTATTTCAGCATCCGAGTTTCGGCAACGAATTGGGTTTGCGATGATTGGTTTGAGAGATGAAATTTACGTGATCGGAGGGGATATCGGTCCCGACCGTTTGAATTGGGACATCAAACCAACGTCGGACGTCGACATATTGACAACAGGAGGTGAGAGGCCAACATGGCGACATGCAGCTTCGATGACGAAATGCTGTGGAGCGATTCGGGGATGTGCTCGGTTGAGAATTTAG

mRNA sequence

ATGTCTGAATTGATTGACGGTCTCCCAGACGCTGTCGCCCTTAGGTGCCTCGCTCGTGTTCCCTTCCACCTCTATCCAAAGTTGGAGCTTGTTTCTAAATCCTGGCTAGCTGCCATTCGTAGTTCTGAACTTTTTAGAGTTCGACAGGAGATTGGATCATCAGAAGATCTATTATGCGTATGCGCATTTGAACCCGAGAATCTATGGCAGCTTTATGACCCCCTCAGAGACCTTTGGATAACAATTCCTGTACTTCCATCGAGAATTAGGCATCTTGCACACTTTGGTGCCGTCTCCACTGCTGGAAAGTTGTTTGTGCTCGGCGGTGGCAGTGATGACGTTGATCCATTGACTGGTGATCAAGATAGGAACTTTGCAACCAATGAGGTATGGTCATATGATCCTATAATACATCGGTGGTTTCAACGTGCATCGATGCTTGTACCACGTGCCATGTTTGCGTGCTGTGTCTTGGGTGGAAGGATTGTCGTTGCGGGTGGTTTTACTAGCTGCAGAAAATCGATTTCTCAGGCAGAAATGTATGACCCTGATAAAGATGTATGGATTCCACTGCCTGATCTACACCATACTCACAACTCTGCTTGCACAGGGGTAGTGATTGGAGGGAAGTTGCACGTTTTGCACAAGGGGTTATCAACGGTGCAAATTTTCGACGATGTGCAGCTTGAATGGAGAGTTGAAGACTATGGTTGGCTCCAAGGTCCAATGGCTGTTGTCCAGGGTTCACTTTATGTCATGAGCCATGGACATATTTTCAAGCACGATGGAGAAGTGAGGAAGGTTGTTATTTCAGCATCCGAGTTTCGGCAACGAATTGGGTTTGCGATGATTGGTTTGAGAGATGAAATTTACGTGATCGGAGGGGATATCGGTCCCGACCGTTTGAATTGGGACATCAAACCAACGTCGGACGTCGACATATTGACAACAGGAGGTGAGAGGCCAACATGGCGACATGCAGCTTCGATGACGAAATGCTGTGGAGCGATTCGGGGATGTGCTCGGTTGAGAATTTAG

Coding sequence (CDS)

ATGTCTGAATTGATTGACGGTCTCCCAGACGCTGTCGCCCTTAGGTGCCTCGCTCGTGTTCCCTTCCACCTCTATCCAAAGTTGGAGCTTGTTTCTAAATCCTGGCTAGCTGCCATTCGTAGTTCTGAACTTTTTAGAGTTCGACAGGAGATTGGATCATCAGAAGATCTATTATGCGTATGCGCATTTGAACCCGAGAATCTATGGCAGCTTTATGACCCCCTCAGAGACCTTTGGATAACAATTCCTGTACTTCCATCGAGAATTAGGCATCTTGCACACTTTGGTGCCGTCTCCACTGCTGGAAAGTTGTTTGTGCTCGGCGGTGGCAGTGATGACGTTGATCCATTGACTGGTGATCAAGATAGGAACTTTGCAACCAATGAGGTATGGTCATATGATCCTATAATACATCGGTGGTTTCAACGTGCATCGATGCTTGTACCACGTGCCATGTTTGCGTGCTGTGTCTTGGGTGGAAGGATTGTCGTTGCGGGTGGTTTTACTAGCTGCAGAAAATCGATTTCTCAGGCAGAAATGTATGACCCTGATAAAGATGTATGGATTCCACTGCCTGATCTACACCATACTCACAACTCTGCTTGCACAGGGGTAGTGATTGGAGGGAAGTTGCACGTTTTGCACAAGGGGTTATCAACGGTGCAAATTTTCGACGATGTGCAGCTTGAATGGAGAGTTGAAGACTATGGTTGGCTCCAAGGTCCAATGGCTGTTGTCCAGGGTTCACTTTATGTCATGAGCCATGGACATATTTTCAAGCACGATGGAGAAGTGAGGAAGGTTGTTATTTCAGCATCCGAGTTTCGGCAACGAATTGGGTTTGCGATGATTGGTTTGAGAGATGAAATTTACGTGATCGGAGGGGATATCGGTCCCGACCGTTTGAATTGGGACATCAAACCAACGTCGGACGTCGACATATTGACAACAGGAGGTGAGAGGCCAACATGGCGACATGCAGCTTCGATGACGAAATGCTGTGGAGCGATTCGGGGATGTGCTCGGTTGAGAATTTAG

Protein sequence

MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCVCAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGDQDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEMYDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQGPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPDRLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI

Homology

[Close]

BLAST of Cp4.1LG15g00300.1 vs. ExPASy Swiss-Prot
Match: Q9M1W7 (F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana OX=3702 GN=SKIP30 PE=1 SV=2)

HSP 1 Score: 523.9 bits (1348), Expect = 1.4e-147
Identity = 239/345 (69.28%), Postives = 283/345 (82.03%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60
           MS L+DG+P+AVALRCLA VP HL+P LELVS+SW AAIRS ELFRVR+E+ SSE LLCV
Sbjct: 8   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 67

Query: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120
           CAF+PEN+WQ+Y P  D W+T+P+LPSRIRHLAHFGAV+TAG LFVLGGGSD V P+TGD
Sbjct: 68  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 127

Query: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180
            D  FAT++VWSYD +  +W  RASMLVPRAMFACCVL G+IVVAGGFT+CRKSIS AEM
Sbjct: 128 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 187

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240
           YDP+ DVW  +PDLH THNSAC+G+V+ GK+HVLHKGLSTVQ+ + V+L W V+DYGW Q
Sbjct: 188 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 247

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPM VV+  LYVMSHG +FK +G+  K+V SASEF++RIG AM  L DE+ ++GG IGPD
Sbjct: 248 GPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPD 307

Query: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 346
           RLNWDIKP SDVD LT G +RP WR  A MT+C G I GC +L I
Sbjct: 308 RLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 352

[Close]

BLAST of Cp4.1LG15g00300.1 vs. ExPASy Swiss-Prot
Match: Q0WW40 (F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana OX=3702 GN=At1g16250 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.6e-28
Identity = 106/384 (27.60%), Postives = 163/384 (42.45%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCVCAF 63
           +I GLPD +ALRC+A++    +  LE VS+ W   +R ++    +   G S   L V   
Sbjct: 8   IIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLTE 67

Query: 64  EPENLWQLYDPLRDLWITIPVLPSRIR------HLAHFGAVSTAGKLFVLGG-GSDDVDP 123
             +N W  YDP  D W  +P    R R      H + F  V  +  L V+GG  +  V  
Sbjct: 68  RSKNQWVAYDPEADRWHPLP----RTRAVQDGWHHSGFACVCVSNCLLVIGGCYAPSVSS 127

Query: 124 LTGDQDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFT-SCRKSI 183
                 +   T +V  +DP   +W   ASM  PR  FAC  + G++ VAGG   +  + I
Sbjct: 128 F--PHQKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGI 187

Query: 184 SQAEMYDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGL-----STVQIFDDVQLE 243
             AE+YDP  D W  LP +       C+G+   G  HVL   +     ++ ++F+   + 
Sbjct: 188 PSAEVYDPVADRWEELPAMPRPQMD-CSGLSYRGCFHVLSDQVGFAEQNSSEVFNPRDMT 247

Query: 244 WRVEDYGWLQGPMA-VVQGSLYVMSHGHIFK--------------------HDGEVRKVV 303
           W   +  W   P +  +Q ++ VM +  ++                     + G V  VV
Sbjct: 248 WSTVEDVW---PFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVPSVV 307

Query: 304 I-SASEFRQRIGFAMIGLRDEIYVIGGDIGPDRLNWDIKPTSDVDI-------LTTGGER 344
           + +     +  G+    LR+E+YVIGG +    L W+       DI       +    +R
Sbjct: 308 LPNHPRELEAFGYGFAALRNELYVIGGKV----LKWEESGAGRFDIVRLPVVRVCNPLDR 367

[Close]

BLAST of Cp4.1LG15g00300.1 vs. ExPASy Swiss-Prot
Match: Q93W93 (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g55270 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.7e-23
Identity = 79/259 (30.50%), Postives = 117/259 (45.17%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCVCAF 63
           L+ GLPD +A+ CL RVP   + KL LV K W      +  +  R+ +G SE+ + V   
Sbjct: 78  LLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFKR 137

Query: 64  EPEN--LWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGDQ 123
           + +    W  +DP+  LW  +P +P        FG    +G    L GG    DPL G  
Sbjct: 138 DRDGKISWNTFDPISQLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGGK---DPLRGSM 197

Query: 124 DRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGG-FTSCRKSISQAEM 183
            R      V  Y+   ++W +   ML  R  F CCV+   + VAGG     ++++  AE+
Sbjct: 198 RR------VIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTLRSAEV 257

Query: 184 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQI-----FDDVQLEWRVED 243
           YDP+K+ W  + D+  T      GVV   K  +  KGL + Q+     +D     W    
Sbjct: 258 YDPNKNRWSFIADM-STAMVPLIGVVYDKKWFL--KGLGSHQLVMSEAYDPEVNSWSPVS 317

Query: 244 YGWLQG---PMAVVQGSLY 252
            G + G   P   + G LY
Sbjct: 318 DGMVAGWRNPCTSLNGRLY 324

[Close]

BLAST of Cp4.1LG15g00300.1 vs. ExPASy Swiss-Prot
Match: Q9CAG8 (F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g67480 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-21
Identity = 68/214 (31.78%), Postives = 99/214 (46.26%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCVCAF 63
           LI GLPD VA +CLA VP   +P +  V K W   ++S E   VR+  G  E+ L V   
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTM 98

Query: 64  E---PENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 123
                +N W++ D L     ++P +P   +    F  V   GKL V+ G       L   
Sbjct: 99  NAGGKDNRWEVMDCLGQKLSSLPPMPGPAK--TGFKVVVVDGKLLVIAGCCMINGSLV-- 158

Query: 124 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 183
                A+ +V+ YD  ++ W + A + V R  FAC  + G + V GG     +S+S AE+
Sbjct: 159 -----ASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEV 218

Query: 184 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVL 215
           YDP+   W  +  L       C      GKL+V+
Sbjct: 219 YDPETCTWTFIESLRRP-RWGCFASAFNGKLYVM 242

[Close]

BLAST of Cp4.1LG15g00300.1 vs. ExPASy Swiss-Prot
Match: Q9FKJ0 (F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana OX=3702 GN=At5g60570 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.5e-21
Identity = 71/237 (29.96%), Postives = 111/237 (46.84%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLL-CVCA 63
           ++ GL D VAL CLA VP   YP L  V+K +   I S  LF +R+E+G  E L+  VC 
Sbjct: 49  VLPGLIDDVALNCLAWVPRSDYPSLSCVNKKYNKLINSGHLFALRKELGIVEYLVFMVC- 108

Query: 64  FEPENLWQLYDPLRDLWITIPVLP-SRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGDQ 123
            +P   W ++ P++  W+ +P +P     + A   +++   +L V G             
Sbjct: 109 -DPRG-WLMFSPMKKKWMVLPKMPCDECFNHADKESLAVDDELLVFG------------- 168

Query: 124 DRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEMY 183
            R      +W Y      W +   M  PR +FA   LGG  +VAGG       ++ AE+Y
Sbjct: 169 -RELFQFAIWKYSLRSRCWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELY 228

Query: 184 DPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGW 239
           D     W  LP++ H+    C+G  + GK +V+  G+S+  +      E+ +E   W
Sbjct: 229 DSSSGRWEMLPNM-HSPRRLCSGFFMDGKFYVI-GGMSSPNVSVTFGEEFDLETRKW 266

[Close]

BLAST of Cp4.1LG15g00300.1 vs. NCBI nr
Match: XP_023511586.1 (F-box/kelch-repeat protein SKIP30 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 723 bits (1867), Expect = 1.19e-263
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120
           CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240
           YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ
Sbjct: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345
           RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI
Sbjct: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of Cp4.1LG15g00300.1 vs. NCBI nr
Match: XP_022963882.1 (F-box/kelch-repeat protein SKIP30 [Cucurbita moschata] >XP_022967369.1 F-box/kelch-repeat protein SKIP30 [Cucurbita maxima] >KAG6571462.1 F-box/kelch-repeat protein SKIP30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011226.1 F-box/kelch-repeat protein SKIP30, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 720 bits (1858), Expect = 2.79e-262
Identity = 343/345 (99.42%), Postives = 344/345 (99.71%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120
           CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240
           YDPD+DVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQI DDVQLEWRVEDYGWLQ
Sbjct: 181 YDPDRDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQILDDVQLEWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345
           RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI
Sbjct: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of Cp4.1LG15g00300.1 vs. NCBI nr
Match: XP_022146023.1 (F-box/kelch-repeat protein SKIP30 [Momordica charantia] >XP_022146024.1 F-box/kelch-repeat protein SKIP30 [Momordica charantia] >XP_022146025.1 F-box/kelch-repeat protein SKIP30 [Momordica charantia])

HSP 1 Score: 655 bits (1689), Expect = 1.62e-236
Identity = 312/345 (90.43%), Postives = 325/345 (94.20%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELIDGLPDAVALRCLARVPFHLY  LELVS SW AAIRS+ELFRVR+EIGSSE+LLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120
           CAFEPENLWQLYDPLRDLWIT+PV PS+IRHLAHFGAVSTAGKLFV+GGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDP+IH+W QRA MLV RAMFACCVLGG+IVVAGGFTSCRKSISQAE+
Sbjct: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240
           YDPDKDVWIPLPDLHHTHNSACTG VIGGKLHVLHKGLSTVQIFD+V+  WRVEDYGWLQ
Sbjct: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPM VVQ SLYVMSHG IFKHD EVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD
Sbjct: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345
           RLNWDIKPTSDVDILTT GERPTWRHAA MT+C GAIRGCA LRI
Sbjct: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 345

[Close]

BLAST of Cp4.1LG15g00300.1 vs. NCBI nr
Match: XP_022931065.1 (F-box/kelch-repeat protein SKIP30-like [Cucurbita moschata] >XP_022931066.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita moschata] >XP_022931067.1 F-box/kelch-repeat protein SKIP30-like [Cucurbita moschata])

HSP 1 Score: 655 bits (1689), Expect = 1.62e-236
Identity = 310/345 (89.86%), Postives = 325/345 (94.20%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELID LPDAVALRCLARVPFHLYPKLELVS SW AAI S+EL+RVRQEIGSSEDLLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120
           CAFEPENLWQLYDPLRDLW+TIPVLPS+IRHLA FGAVSTAGKLFVLGGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDP+I RW Q ASMLVPRAMFACCVL G+IVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240
           YDPDKD WIPLPDLHHTH+SACTGVVIGGKLHVLHKGLSTVQIF++ +  WRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPM VVQGSLYVMSHGHIFKHDGE +KVVISASEFRQRIGFAM+ LRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345
           RLNWD+KPTSDVDILTTGGERPTWR A SMT+C GAIRGCA+LRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Cp4.1LG15g00300.1 vs. NCBI nr
Match: KAG6606420.1 (F-box/kelch-repeat protein SKIP30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036358.1 F-box/kelch-repeat protein SKIP30, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 654 bits (1687), Expect = 3.27e-236
Identity = 310/345 (89.86%), Postives = 324/345 (93.91%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELID LPDAVALRCLARVPFHLYPKLELVS SW AAI S+EL+RVRQEIGSSEDLLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120
           CAFEPENLWQLYDPLRDLW+TIPVLPS+IRHLA FGAVSTAGKLFVLGGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDP+I RW Q ASMLVPRAMFACCVL G IVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGNIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240
           YDPDKD WIPLPDLHHTH+SACTGVVIGGKLHVLHKGLSTVQIF++ +  WRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPM VVQGSLYVMSHGHIFKHDGE +KVVISASEFRQRIGFAM+ LRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345
           RLNWD+KPTSDVDILTTGGERPTWR A SMT+C GAIRGCA+LRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Cp4.1LG15g00300.1 vs. ExPASy TrEMBL
Match: A0A6J1HWH7 (F-box/kelch-repeat protein SKIP30 OS=Cucurbita maxima OX=3661 GN=LOC111466917 PE=4 SV=1)

HSP 1 Score: 720 bits (1858), Expect = 1.35e-262
Identity = 343/345 (99.42%), Postives = 344/345 (99.71%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120
           CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240
           YDPD+DVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQI DDVQLEWRVEDYGWLQ
Sbjct: 181 YDPDRDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQILDDVQLEWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345
           RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI
Sbjct: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of Cp4.1LG15g00300.1 vs. ExPASy TrEMBL
Match: A0A6J1HGE3 (F-box/kelch-repeat protein SKIP30 OS=Cucurbita moschata OX=3662 GN=LOC111464058 PE=4 SV=1)

HSP 1 Score: 720 bits (1858), Expect = 1.35e-262
Identity = 343/345 (99.42%), Postives = 344/345 (99.71%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120
           CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240
           YDPD+DVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQI DDVQLEWRVEDYGWLQ
Sbjct: 181 YDPDRDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQILDDVQLEWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345
           RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI
Sbjct: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of Cp4.1LG15g00300.1 vs. ExPASy TrEMBL
Match: A0A6J1CW43 (F-box/kelch-repeat protein SKIP30 OS=Momordica charantia OX=3673 GN=LOC111015334 PE=4 SV=1)

HSP 1 Score: 655 bits (1689), Expect = 7.84e-237
Identity = 312/345 (90.43%), Postives = 325/345 (94.20%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELIDGLPDAVALRCLARVPFHLY  LELVS SW AAIRS+ELFRVR+EIGSSE+LLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYQTLELVSHSWKAAIRSAELFRVRREIGSSENLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120
           CAFEPENLWQLYDPLRDLWIT+PV PS+IRHLAHFGAVSTAGKLFV+GGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITLPVFPSKIRHLAHFGAVSTAGKLFVVGGGSDAVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDP+IH+W QRA MLV RAMFACCVLGG+IVVAGGFTSCRKSISQAE+
Sbjct: 121 QDRNFATNEVWSYDPVIHKWSQRAPMLVARAMFACCVLGGKIVVAGGFTSCRKSISQAEV 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240
           YDPDKDVWIPLPDLHHTHNSACTG VIGGKLHVLHKGLSTVQIFD+V+  WRVEDYGWLQ
Sbjct: 181 YDPDKDVWIPLPDLHHTHNSACTGAVIGGKLHVLHKGLSTVQIFDNVRPGWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPM VVQ SLYVMSHG IFKHD EVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD
Sbjct: 241 GPMVVVQDSLYVMSHGLIFKHDKEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345
           RLNWDIKPTSDVDILTT GERPTWRHAA MT+C GAIRGCA LRI
Sbjct: 301 RLNWDIKPTSDVDILTTAGERPTWRHAAPMTRCRGAIRGCAELRI 345

[Close]

BLAST of Cp4.1LG15g00300.1 vs. ExPASy TrEMBL
Match: A0A6J1ESG5 (F-box/kelch-repeat protein SKIP30-like OS=Cucurbita moschata OX=3662 GN=LOC111437365 PE=4 SV=1)

HSP 1 Score: 655 bits (1689), Expect = 7.84e-237
Identity = 310/345 (89.86%), Postives = 325/345 (94.20%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELID LPDAVALRCLARVPFHLYPKLELVS SW AAI S+EL+RVRQEIGSSEDLLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPKLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120
           CAFEPENLWQLYDPLRDLW+TIPVLPS+IRHLA FGAVSTAGKLFVLGGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDP+I RW Q ASMLVPRAMFACCVL G+IVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240
           YDPDKD WIPLPDLHHTH+SACTGVVIGGKLHVLHKGLSTVQIF++ +  WRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPM VVQGSLYVMSHGHIFKHDGE +KVVISASEFRQRIGFAM+ LRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVVISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345
           RLNWD+KPTSDVDILTTGGERPTWR A SMT+C GAIRGCA+LRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRQATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Cp4.1LG15g00300.1 vs. ExPASy TrEMBL
Match: A0A6J1K7U2 (F-box/kelch-repeat protein SKIP30-like OS=Cucurbita maxima OX=3661 GN=LOC111491436 PE=4 SV=1)

HSP 1 Score: 653 bits (1684), Expect = 4.53e-236
Identity = 308/345 (89.28%), Postives = 325/345 (94.20%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60
           MSELID LPDAVALRCLARVPFHLYP+LELVS SW AAI S+EL+RVRQEIGSSEDLLCV
Sbjct: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120
           CAFEPENLWQLYDPLRDLW+TIPVLPS+IRHLA FGAVSTAGKLFVLGGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDP+I RW Q ASMLVPRAMFACCVL G+IVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240
           YDPDKD WIPLPDLHHTH+SACTGVVIGGKLHVLHKGLSTVQIF++ +  WRVEDYGWLQ
Sbjct: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPM VVQGSLYVMSHGHIFKHDGE +KV+ISASEFRQRIGFAM+ LRDEIYVIGGDIGPD
Sbjct: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300

Query: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345
           RLNWD+KPTSDVDILTTGGERPTWR A SMT+C GAIRGCA+LRI
Sbjct: 301 RLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 345

[Close]

BLAST of Cp4.1LG15g00300.1 vs. TAIR 10
Match: AT3G63220.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 523.9 bits (1348), Expect = 1.0e-148
Identity = 239/345 (69.28%), Postives = 283/345 (82.03%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60
           MS L+DG+P+AVALRCLA VP HL+P LELVS+SW AAIRS ELFRVR+E+ SSE LLCV
Sbjct: 1   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120
           CAF+PEN+WQ+Y P  D W+T+P+LPSRIRHLAHFGAV+TAG LFVLGGGSD V P+TGD
Sbjct: 61  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 120

Query: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180
            D  FAT++VWSYD +  +W  RASMLVPRAMFACCVL G+IVVAGGFT+CRKSIS AEM
Sbjct: 121 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 180

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240
           YDP+ DVW  +PDLH THNSAC+G+V+ GK+HVLHKGLSTVQ+ + V+L W V+DYGW Q
Sbjct: 181 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 240

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPM VV+  LYVMSHG +FK +G+  K+V SASEF++RIG AM  L DE+ ++GG IGPD
Sbjct: 241 GPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPD 300

Query: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 346
           RLNWDIKP SDVD LT G +RP WR  A MT+C G I GC +L I
Sbjct: 301 RLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 345

[Close]

BLAST of Cp4.1LG15g00300.1 vs. TAIR 10
Match: AT3G63220.2 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 523.9 bits (1348), Expect = 1.0e-148
Identity = 239/345 (69.28%), Postives = 283/345 (82.03%), Query Frame = 0


Query: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60
           MS L+DG+P+AVALRCLA VP HL+P LELVS+SW AAIRS ELFRVR+E+ SSE LLCV
Sbjct: 8   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 67

Query: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120
           CAF+PEN+WQ+Y P  D W+T+P+LPSRIRHLAHFGAV+TAG LFVLGGGSD V P+TGD
Sbjct: 68  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 127

Query: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180
            D  FAT++VWSYD +  +W  RASMLVPRAMFACCVL G+IVVAGGFT+CRKSIS AEM
Sbjct: 128 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 187

Query: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240
           YDP+ DVW  +PDLH THNSAC+G+V+ GK+HVLHKGLSTVQ+ + V+L W V+DYGW Q
Sbjct: 188 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 247

Query: 241 GPMAVVQGSLYVMSHGHIFKHDGEVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGPD 300
           GPM VV+  LYVMSHG +FK +G+  K+V SASEF++RIG AM  L DE+ ++GG IGPD
Sbjct: 248 GPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPD 307

Query: 301 RLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 346
           RLNWDIKP SDVD LT G +RP WR  A MT+C G I GC +L I
Sbjct: 308 RLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 352

[Close]

BLAST of Cp4.1LG15g00300.1 vs. TAIR 10
Match: AT1G16250.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 126.3 bits (316), Expect = 4.7e-29
Identity = 106/384 (27.60%), Postives = 163/384 (42.45%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCVCAF 63
           +I GLPD +ALRC+A++    +  LE VS+ W   +R ++    +   G S   L V   
Sbjct: 8   IIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLTE 67

Query: 64  EPENLWQLYDPLRDLWITIPVLPSRIR------HLAHFGAVSTAGKLFVLGG-GSDDVDP 123
             +N W  YDP  D W  +P    R R      H + F  V  +  L V+GG  +  V  
Sbjct: 68  RSKNQWVAYDPEADRWHPLP----RTRAVQDGWHHSGFACVCVSNCLLVIGGCYAPSVSS 127

Query: 124 LTGDQDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFT-SCRKSI 183
                 +   T +V  +DP   +W   ASM  PR  FAC  + G++ VAGG   +  + I
Sbjct: 128 F--PHQKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGI 187

Query: 184 SQAEMYDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGL-----STVQIFDDVQLE 243
             AE+YDP  D W  LP +       C+G+   G  HVL   +     ++ ++F+   + 
Sbjct: 188 PSAEVYDPVADRWEELPAMPRPQMD-CSGLSYRGCFHVLSDQVGFAEQNSSEVFNPRDMT 247

Query: 244 WRVEDYGWLQGPMA-VVQGSLYVMSHGHIFK--------------------HDGEVRKVV 303
           W   +  W   P +  +Q ++ VM +  ++                     + G V  VV
Sbjct: 248 WSTVEDVW---PFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVPSVV 307

Query: 304 I-SASEFRQRIGFAMIGLRDEIYVIGGDIGPDRLNWDIKPTSDVDI-------LTTGGER 344
           + +     +  G+    LR+E+YVIGG +    L W+       DI       +    +R
Sbjct: 308 LPNHPRELEAFGYGFAALRNELYVIGGKV----LKWEESGAGRFDIVRLPVVRVCNPLDR 367

[Close]

BLAST of Cp4.1LG15g00300.1 vs. TAIR 10
Match: AT1G55270.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-24
Identity = 79/259 (30.50%), Postives = 117/259 (45.17%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCVCAF 63
           L+ GLPD +A+ CL RVP   + KL LV K W      +  +  R+ +G SE+ + V   
Sbjct: 78  LLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFKR 137

Query: 64  EPEN--LWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGDQ 123
           + +    W  +DP+  LW  +P +P        FG    +G    L GG    DPL G  
Sbjct: 138 DRDGKISWNTFDPISQLWQPLPPVPREYSEAVGFGCAVLSGCHLYLFGGK---DPLRGSM 197

Query: 124 DRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGG-FTSCRKSISQAEM 183
            R      V  Y+   ++W +   ML  R  F CCV+   + VAGG     ++++  AE+
Sbjct: 198 RR------VIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTLRSAEV 257

Query: 184 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQI-----FDDVQLEWRVED 243
           YDP+K+ W  + D+  T      GVV   K  +  KGL + Q+     +D     W    
Sbjct: 258 YDPNKNRWSFIADM-STAMVPLIGVVYDKKWFL--KGLGSHQLVMSEAYDPEVNSWSPVS 317

Query: 244 YGWLQG---PMAVVQGSLY 252
            G + G   P   + G LY
Sbjct: 318 DGMVAGWRNPCTSLNGRLY 324

[Close]

BLAST of Cp4.1LG15g00300.1 vs. TAIR 10
Match: AT1G67480.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 8.5e-23
Identity = 68/214 (31.78%), Postives = 99/214 (46.26%), Query Frame = 0


Query: 4   LIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCVCAF 63
           LI GLPD VA +CLA VP   +P +  V K W   ++S E   VR+  G  E+ L V   
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTM 98

Query: 64  E---PENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 123
                +N W++ D L     ++P +P   +    F  V   GKL V+ G       L   
Sbjct: 99  NAGGKDNRWEVMDCLGQKLSSLPPMPGPAK--TGFKVVVVDGKLLVIAGCCMINGSLV-- 158

Query: 124 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 183
                A+ +V+ YD  ++ W + A + V R  FAC  + G + V GG     +S+S AE+
Sbjct: 159 -----ASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEV 218

Query: 184 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVL 215
           YDP+   W  +  L       C      GKL+V+
Sbjct: 219 YDPETCTWTFIESLRRP-RWGCFASAFNGKLYVM 242

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g00300.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1W7	1.4e-147	69.28	F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana OX=3702 GN=SKIP30 PE=1...	[more]
Q0WW40	6.6e-28	27.60	F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana OX=3702 GN=At1g1625...	[more]
Q93W93	1.7e-23	30.50	F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g5527...	[more]
Q9CAG8	1.2e-21	31.78	F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g6748...	[more]
Q9FKJ0	3.5e-21	29.96	F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana OX=3702 GN=At5g6057...	[more]

BLAST of Cp4.1LG15g00300.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023511586.1	1.19e-263	100.00	F-box/kelch-repeat protein SKIP30 [Cucurbita pepo subsp. pepo]	[more]
XP_022963882.1	2.79e-262	99.42	F-box/kelch-repeat protein SKIP30 [Cucurbita moschata] >XP_022967369.1 F-box/kel...	[more]
XP_022146023.1	1.62e-236	90.43	F-box/kelch-repeat protein SKIP30 [Momordica charantia] >XP_022146024.1 F-box/ke...	[more]
XP_022931065.1	1.62e-236	89.86	F-box/kelch-repeat protein SKIP30-like [Cucurbita moschata] >XP_022931066.1 F-bo...	[more]
KAG6606420.1	3.27e-236	89.86	F-box/kelch-repeat protein SKIP30, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG15g00300.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HWH7	1.35e-262	99.42	F-box/kelch-repeat protein SKIP30 OS=Cucurbita maxima OX=3661 GN=LOC111466917 PE...	[more]
A0A6J1HGE3	1.35e-262	99.42	F-box/kelch-repeat protein SKIP30 OS=Cucurbita moschata OX=3662 GN=LOC111464058 ...	[more]
A0A6J1CW43	7.84e-237	90.43	F-box/kelch-repeat protein SKIP30 OS=Momordica charantia OX=3673 GN=LOC111015334...	[more]
A0A6J1ESG5	7.84e-237	89.86	F-box/kelch-repeat protein SKIP30-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1K7U2	4.53e-236	89.28	F-box/kelch-repeat protein SKIP30-like OS=Cucurbita maxima OX=3661 GN=LOC1114914...	[more]

BLAST of Cp4.1LG15g00300.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63220.1	1.0e-148	69.28	Galactose oxidase/kelch repeat superfamily protein	[more]
AT3G63220.2	1.0e-148	69.28	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G16250.1	4.7e-29	27.60	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G55270.1	1.2e-24	30.50	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G67480.1	8.5e-23	31.78	Galactose oxidase/kelch repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006652	Kelch repeat type 1	SMART	SM00612	kelc_smart	coord: 103..160 e-value: 0.0064 score: 25.7 coord: 161..208 e-value: 7.7E-6 score: 35.4
IPR006652	Kelch repeat type 1	PFAM	PF01344	Kelch_1	coord: 92..146 e-value: 5.4E-7 score: 29.1 coord: 149..194 e-value: 1.4E-11 score: 43.8
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 58..341 e-value: 1.2E-34 score: 121.6
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 61..329
None	No IPR available	PANTHER	PTHR24414	F-BOX/KELCH-REPEAT PROTEIN SKIP4	coord: 2..345
None	No IPR available	PANTHER	PTHR24414:SF40	F-BOX/KELCH-REPEAT PROTEIN SKIP30	coord: 2..345

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG15g00300	Cp4.1LG15g00300	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG15g00300.1:exon:001	Cp4.1LG15g00300.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG15g00300.1:cds:001	Cp4.1LG15g00300.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG15g00300.1	Cp4.1LG15g00300.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding