Cp4.1LG12g06180.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g06180.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Unknown protein
Location	Cp4.1LG12: 7672848 .. 7676641 (-)
Sequence length	2227
RNA-Seq Expression	Cp4.1LG12g06180.1
Synteny	Cp4.1LG12g06180.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATGTGGCCGACGATTTCATAATCAACTGGGAATTATCGTTTCCATTGGTTTTTGACCCGTTTGGAGCAAATATAAATATCATCCAAGGATTGACTCAGTCATCCGTCGCCGTCTCCGATCAGGACAAATTCTCACGCTCCAGTTTCATAAAGGTTTACTTTCATAATTTATCCATGTCCCATTTCATTCAACTATTTTTTATTTTCCAATAATGCATTTTTTCATGTCCTGATGATCAGACAAGAACTGTTCCGTAATCGATTTGGATTTTGTCGGTCTGAGCTGAATACCGATTGAATTTCGGTAGGTTTTTACTGATTCCTCGCTATTGGGTTTCTGGATTTTTCGATTCGACTCATTCTAGGTTATTTTCGGACTTGTTTGTTCGTTCCAATTTATGTTTATGTTTATGTTTAATCGGTTTCTTTTTAGTTTTTCATAATTTCTGGGATGATGTTTTTCTCATTTTTTGTGTGTTTTGCTAAATTTGTTTTCGCATTACCGAAGCTGTTCTTGTTTGGCTATTGGTATCGAAATATTGGTGTCGGATTCTTACCAATGCTATGTTAATTGTTGTTTTCTTGCTTATTTTGTAATTTAAGAGACTTATGGGTTAGATTCTTTGGAGGTCCCTTTGATGTTCTTGAGATTGACCTTCTCAGTATGGTTCAGCTATTTCACGGATTTTGAAGTTTTGCATTTGCAATATGTTGGAAATTTCATTGTATTGAAGTGGGAGTGTTCTTCTGTTTCTTCATTGTTATGTTACAGCGATTCGGGGATTCGCATTAGGATTGAACGTTCATCTTTGATTGCAGAGTTCGAGTGAATTTTGGTTGTTTTAGTTGAAAGGCTATGAGATTGAGTACATGGCTTTAAGAGAAAGGGATCTCGCGTTTGATCTCGAAAGTGGGGGGAGGATCGGTGACGAGGTTGGAAGTGTGGAACCAAGTTCGATCAAAAGAGATGTAAAGAACATTTGGAATAGGTTGACAGAGGATACACTGCTAAAAGATGAGCTAGTCGTAGCGTCAAACAGTAATTTTGTTAATTCTGTTGCCGATGTTGTTGCTGATGTGAACGTAGAGTTGTTGATAGATAAGAATTTGGAAGGAGAAGACGATTGTGAAGCTTTTGCGCATGTCGAGAAAACTAATGCTAGAGGGAAGCATAAGAATAAGAAAAAGGCTCTGAAGCCACCACGGCCGCCCAAAGGTCCTGCTCTTGATGCTGCTGATAGAAGGCTGGTGAAGGAAATTGCAGTAATTGCCATGAAAAAACGTGCAAGAGTCGAGCGAATGAAAGCATTAAGGAAGTCAAAAGCCGAGAAAACATCTTCCTTCAATAGTTGCATTCCTGCCATGATTATCACATTCCTGTTCTTCCTTGTAATCATCCTTCAAGGTTAGCTTATTATAAGTCCTATACTGCTTGGTCTTGAAAATTTGTAGTTTGGGGAGGGTGTTCTTAGTGTCGTGTCCTTCAATCTGGTTATCAGTTTGTGCCTTCTTTTAGCATTATGTTCTTAAGGGAGTTTTATTCAACCATGTTTACAGGAATAAGTTCCCGAAGCAGTCCGATGCTGCAGGGGTCACCCGAACCTGCTGTTGATGGTAGTAGCGGTTTCATTTCCGTTCAGTACATTAAAAGCTTTCCTCCAAATGAAAGCAATATGGCGAATCCCCCCGATGTTAAGTGCGTATCGTTAGTGAATGGTTATGGTTTATTGAATATAACTTTCCAAGTATTCCTAGTCTAATTTTGTACCATCTTGTTGATGCAGTTCTGCTGCGTAACTCGTTTCGGGTTTTGTTCCTCTTTAAGGTGAAAAGGGTGGCTGATTTGAGGATCTTTTTGAAGTTGACAGCCTAGGAGCCAGCTTGCTGGCTCTTATGGCCATGATTTTTGAATAGTTGCTTCGATGCGCGGTTGCATCCGACTGATCTGTATATAAATACGAAGAAACATCGAATTTTTCGTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAATCAGATGCTTTTATATCTTAATAATTTATATTGGAAAGTTCATGGTGATGTTCTTGGATGTAGGTAGCTGAACCTACTTAAAAGGTATAGCAGACAGTCCTGCATGCTTCCAGGCTTTCTTTTGATGAGTTGAGTTACGAACTTTTTCCTTTTCAATTTAGCTAACAAACCTGCAGGATTATGATGATATGTTTGGATGATGCTTAACCCTCTACGCCTTTGATTTGCTGCTGGTAGATGATGTTCATGCCGTTCTTCGAGGATAAACAGGTACAATCGACCACTGGCCAATTGATTCTTGAATTTGTTAGATTTATGAGCATATCTTATTCAATGGATGTGAGATCCCATATGGGTTGGGAGGAGAACGAAACATTTTTTATAAGAGATGTGGAAACTTCTCATTAGCAAATGTATTTTGAAACTTCAAAGAGAACAATATCTCCTAGCGGTGAGCTTGGACCATTACAAATGGTATTAGAGTTAGATACTGAACGGTGTGTCAGCGAATTCGAGGGGGGTGGACATTGGGCGGTATGGGTCACGATGGGGGTGGATCATGAGATCTCACATCGATGGGAGAGAGGAATGAGTGCTAGTGAGGATGTTGGGCCTCGAAGGGGGTGGATTGTGAGATCCCACATCTCGACCACATTGGTTGGGGAGGAGAATGAAACCATTCTTTATAAGAGTTTGTAAACCTCTTCCTAACAGACACGTTTTAATCCCTTGAGGGAAAGCCCGGAACGAAAAGTTCAAAGAGAATAATATTTGTTAGCAGTGAGCTTGGGCCGTTACAATGAAGCTTTGAAACTTTCCAAGATTTCAGGTATTAGACAGCAAAATGATATTGTGATTTTATGTTCAAAGCTAAGCTTGAGCTCTACACATAGGCTTTTGTCTTGCAGAGAAACAAAAGCTTCTGACTTTGACATCAAACTTTGTCTCTGTCATTTTCTTTTGTTAACCCCATCTTCATCTTTAGTTGTAGCCAATCTCATCATGGATTCATGTATGAAAACATCCCGTGTCGCCTCTACAGGGACGATCCTCGCAGCATAACAGCTGACACAAAAAGATTATTACTGAAATCGTTCTCGATGAGTCGTTAAATGTAAAGAAATTTTAACTCCGAGTTGTGCTTCATCAATTAGATGACTAATTCTGAGGTGAAGAAGGCGGTCCTGAGCAGATGATCTTCGGTTTCCTTGTGAAAGTCTTCACCGTGATGGATGCATGCACTCTCATGTCTAGCGGCCTCCAGAGTGTTGACTTTTGATACGACAACCCGAAGCTCAATGTTGGCATCTTTCGTCGAAGGAGTACAAAATTGCAACATCGTGGATGCAACTTGAGAGGTCCTTGTGAAGGAGCCATTATGAAAAAGGTCTATTTACATAATTAGGTAGTAATTGTGTAACAACCCAGATCTACCGCGAGCAGGTATTGTTCTCTTTGGGCTTTCCCTTTCGGGCTTCCTCTCAAGGCTTTAAAACGCCGGCTAGAGGAAGGTTTTCATACCCTTATAAAGAGTGTTTTGTTTTCCTCCCCAACCAATGTGGGATATCACAATCCCACCACCTTTGGGGTCAGCGTCCTTGTTGGCACTCATTTCTTTCAACAATCGATGTGGGACCGCTACCAAATCCACCCCCTTTGGGGCCCAGCGTCCTTATTGGCACATCGCCTCGTGTCTACCCCTTTTGGGGAACAGCTAGAAGGCTGGCACATCATCCGGTGTCTAGCTCTCTTACCATTTGTATGACC

mRNA sequence

CAAATGTGGCCGACGATTTCATAATCAACTGGGAATTATCGTTTCCATTGGTTTTTGACCCGTTTGGAGCAAATATAAATATCATCCAAGGATTGACTCAGTCATCCGTCGCCGTCTCCGATCAGGACAAATTCTCACGCTCCAGTTTCATAAAGACAAGAACTGTTCCGTAATCGATTTGGATTTTGTCGGTCTGAGCTGAATACCGATTGAATTTCGCGATTCGGGGATTCGCATTAGGATTGAACGTTCATCTTTGATTGCAGAGTTCGAGTGAATTTTGGTTGTTTTAGTTGAAAGGCTATGAGATTGAGTACATGGCTTTAAGAGAAAGGGATCTCGCGTTTGATCTCGAAAGTGGGGGGAGGATCGGTGACGAGGTTGGAAGTGTGGAACCAAGTTCGATCAAAAGAGATGTAAAGAACATTTGGAATAGGTTGACAGAGGATACACTGCTAAAAGATGAGCTAGTCGTAGCGTCAAACAGTAATTTTGTTAATTCTGTTGCCGATGTTGTTGCTGATGTGAACGTAGAGTTGTTGATAGATAAGAATTTGGAAGGAGAAGACGATTGTGAAGCTTTTGCGCATGTCGAGAAAACTAATGCTAGAGGGAAGCATAAGAATAAGAAAAAGGCTCTGAAGCCACCACGGCCGCCCAAAGGTCCTGCTCTTGATGCTGCTGATAGAAGGCTGGTGAAGGAAATTGCAGTAATTGCCATGAAAAAACGTGCAAGAGTCGAGCGAATGAAAGCATTAAGGAAGTCAAAAGCCGAGAAAACATCTTCCTTCAATAGTTGCATTCCTGCCATGATTATCACATTCCTGTTCTTCCTTGTAATCATCCTTCAAGGAATAAGTTCCCGAAGCAGTCCGATGCTGCAGGGGTCACCCGAACCTGCTGTTGATGGTAGTAGCGGTTTCATTTCCGTTCAGTACATTAAAAGCTTTCCTCCAAATGAAAGCAATATGGCGAATCCCCCCGATGTTAATTCTGCTGCGTAACTCGTTTCGGGTTTTGTTCCTCTTTAAGGTGAAAAGGGTGGCTGATTTGAGGATCTTTTTGAAGTTGACAGCCTAGGAGCCAGCTTGCTGGCTCTTATGGCCATGATTTTTGAATAGTTGCTTCGATGCGCGGTTGCATCCGACTGATCTGTATATAAATACGAAGAAACATCGAATTTTTCGTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAATCAGATGCTTTTATATCTTAATAATTTATATTGGAAAGTTCATGGTGATGTTCTTGGATGTAGGTAGCTGAACCTACTTAAAAGGTATAGCAGACAGTCCTGCATGCTTCCAGGCTTTCTTTTGATGAGTTGAGTTACGAACTTTTTCCTTTTCAATTTAGCTAACAAACCTGCAGGATTATGATGATATGTTTGGATGATGCTTAACCCTCTACGCCTTTGATTTGCTGCTGGTAGATGATGTTCATGCCGTTCTTCGAGGATAAACAGGGACGATCCTCGCAGCATAACAGCTGACACAAAAAGATTATTACTGAAATCGTTCTCGATGAGTCGTTAAATGTAAAGAAATTTTAACTCCGAGTTGTGCTTCATCAATTAGATGACTAATTCTGAGGTGAAGAAGGCGGTCCTGAGCAGATGATCTTCGGTTTCCTTGTGAAAGTCTTCACCGTGATGGATGCATGCACTCTCATGTCTAGCGGCCTCCAGAGTGTTGACTTTTGATACGACAACCCGAAGCTCAATGTTGGCATCTTTCGTCGAAGGAGTACAAAATTGCAACATCGTGGATGCAACTTGAGAGGTCCTTGTGAAGGAGCCATTATGAAAAAGGTCTATTTACATAATTAGGTAGTAATTGTGTAACAACCCAGATCTACCGCGAGCAGGTATTGTTCTCTTTGGGCTTTCCCTTTCGGGCTTCCTCTCAAGGCTTTAAAACGCCGGCTAGAGGAAGGTTTTCATACCCTTATAAAGAGTGTTTTGTTTTCCTCCCCAACCAATGTGGGATATCACAATCCCACCACCTTTGGGGTCAGCGTCCTTGTTGGCACTCATTTCTTTCAACAATCGATGTGGGACCGCTACCAAATCCACCCCCTTTGGGGCCCAGCGTCCTTATTGGCACATCGCCTCGTGTCTACCCCTTTTGGGGAACAGCTAGAAGGCTGGCACATCATCCGGTGTCTAGCTCTCTTACCATTTGTATGACC

Coding sequence (CDS)

ATGGCTTTAAGAGAAAGGGATCTCGCGTTTGATCTCGAAAGTGGGGGGAGGATCGGTGACGAGGTTGGAAGTGTGGAACCAAGTTCGATCAAAAGAGATGTAAAGAACATTTGGAATAGGTTGACAGAGGATACACTGCTAAAAGATGAGCTAGTCGTAGCGTCAAACAGTAATTTTGTTAATTCTGTTGCCGATGTTGTTGCTGATGTGAACGTAGAGTTGTTGATAGATAAGAATTTGGAAGGAGAAGACGATTGTGAAGCTTTTGCGCATGTCGAGAAAACTAATGCTAGAGGGAAGCATAAGAATAAGAAAAAGGCTCTGAAGCCACCACGGCCGCCCAAAGGTCCTGCTCTTGATGCTGCTGATAGAAGGCTGGTGAAGGAAATTGCAGTAATTGCCATGAAAAAACGTGCAAGAGTCGAGCGAATGAAAGCATTAAGGAAGTCAAAAGCCGAGAAAACATCTTCCTTCAATAGTTGCATTCCTGCCATGATTATCACATTCCTGTTCTTCCTTGTAATCATCCTTCAAGGAATAAGTTCCCGAAGCAGTCCGATGCTGCAGGGGTCACCCGAACCTGCTGTTGATGGTAGTAGCGGTTTCATTTCCGTTCAGTACATTAAAAGCTTTCCTCCAAATGAAAGCAATATGGCGAATCCCCCCGATGTTAATTCTGCTGCGTAA

Protein sequence

MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFVNSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALDAADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGISSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA

Homology

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BLAST of Cp4.1LG12g06180.1 vs. NCBI nr
Match: XP_023547469.1 (uncharacterized protein LOC111806405 [Cucurbita pepo subsp. pepo] >XP_023547470.1 uncharacterized protein LOC111806405 [Cucurbita pepo subsp. pepo] >XP_023547471.1 uncharacterized protein LOC111806405 [Cucurbita pepo subsp. pepo] >XP_023547472.1 uncharacterized protein LOC111806405 [Cucurbita pepo subsp. pepo] >KAG6575750.1 hypothetical protein SDJN03_26389, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 431 bits (1108), Expect = 7.01e-152
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFV 60
           MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFV
Sbjct: 1   MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFV 60

Query: 61  NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD 120
           NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD
Sbjct: 61  NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD 120

Query: 121 AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI 180
           AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI
Sbjct: 121 AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI 180

Query: 181 SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA 228
           SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA
Sbjct: 181 SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA 228

[Close]

BLAST of Cp4.1LG12g06180.1 vs. NCBI nr
Match: KAG7014301.1 (hypothetical protein SDJN02_24478 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 430 bits (1105), Expect = 2.01e-151
Identity = 227/228 (99.56%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFV 60
           MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDV+NIWNRLTEDTLLKDELVVASNSNFV
Sbjct: 1   MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVRNIWNRLTEDTLLKDELVVASNSNFV 60

Query: 61  NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD 120
           NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD
Sbjct: 61  NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD 120

Query: 121 AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI 180
           AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI
Sbjct: 121 AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI 180

Query: 181 SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA 228
           SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA
Sbjct: 181 SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA 228

[Close]

BLAST of Cp4.1LG12g06180.1 vs. NCBI nr
Match: XP_022954398.1 (uncharacterized protein LOC111456647 [Cucurbita moschata] >XP_022954399.1 uncharacterized protein LOC111456647 [Cucurbita moschata] >XP_022954400.1 uncharacterized protein LOC111456647 [Cucurbita moschata] >XP_022954401.1 uncharacterized protein LOC111456647 [Cucurbita moschata])

HSP 1 Score: 429 bits (1104), Expect = 2.86e-151
Identity = 227/228 (99.56%), Postives = 227/228 (99.56%), Query Frame = 0


Query: 1   MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFV 60
           MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNF 
Sbjct: 1   MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFA 60

Query: 61  NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD 120
           NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD
Sbjct: 61  NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD 120

Query: 121 AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI 180
           AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI
Sbjct: 121 AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI 180

Query: 181 SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA 228
           SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA
Sbjct: 181 SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA 228

[Close]

BLAST of Cp4.1LG12g06180.1 vs. NCBI nr
Match: XP_022991807.1 (uncharacterized protein LOC111488345 [Cucurbita maxima] >XP_022991808.1 uncharacterized protein LOC111488345 [Cucurbita maxima] >XP_022991809.1 uncharacterized protein LOC111488345 [Cucurbita maxima] >XP_022991810.1 uncharacterized protein LOC111488345 [Cucurbita maxima])

HSP 1 Score: 427 bits (1097), Expect = 3.33e-150
Identity = 225/228 (98.68%), Postives = 227/228 (99.56%), Query Frame = 0


Query: 1   MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFV 60
           MALRERDLAFDLESGGRIG+EVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNF 
Sbjct: 1   MALRERDLAFDLESGGRIGEEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFA 60

Query: 61  NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD 120
           NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGP+LD
Sbjct: 61  NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPSLD 120

Query: 121 AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI 180
           AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI
Sbjct: 121 AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI 180

Query: 181 SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA 228
           SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA
Sbjct: 181 SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA 228

[Close]

BLAST of Cp4.1LG12g06180.1 vs. NCBI nr
Match: XP_038898210.1 (uncharacterized protein LOC120085950 [Benincasa hispida] >XP_038898211.1 uncharacterized protein LOC120085950 [Benincasa hispida] >XP_038898212.1 uncharacterized protein LOC120085950 [Benincasa hispida] >XP_038898213.1 uncharacterized protein LOC120085950 [Benincasa hispida] >XP_038898214.1 uncharacterized protein LOC120085950 [Benincasa hispida] >XP_038898215.1 uncharacterized protein LOC120085950 [Benincasa hispida] >XP_038898216.1 uncharacterized protein LOC120085950 [Benincasa hispida] >XP_038898217.1 uncharacterized protein LOC120085950 [Benincasa hispida] >XP_038898219.1 uncharacterized protein LOC120085950 [Benincasa hispida] >XP_038898220.1 uncharacterized protein LOC120085950 [Benincasa hispida] >XP_038898221.1 uncharacterized protein LOC120085950 [Benincasa hispida] >XP_038898222.1 uncharacterized protein LOC120085950 [Benincasa hispida] >XP_038898223.1 uncharacterized protein LOC120085950 [Benincasa hispida] >XP_038898224.1 uncharacterized protein LOC120085950 [Benincasa hispida])

HSP 1 Score: 365 bits (938), Expect = 5.65e-126
Identity = 190/228 (83.33%), Postives = 210/228 (92.11%), Query Frame = 0


Query: 1   MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFV 60
           MALRERDL  DLESGG+I  EVGSVEPSSIKRDVKNIW+RLT+D+LLKDE +VASNSNF 
Sbjct: 1   MALRERDLTSDLESGGKIVKEVGSVEPSSIKRDVKNIWSRLTDDSLLKDERLVASNSNFA 60

Query: 61  NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD 120
           NSVA+++AD N+E+LIDKNLEGEDD E F H+EK NARGKHKNKKKA KPPRPPKGP+LD
Sbjct: 61  NSVANIIADENIEVLIDKNLEGEDDHEVFVHMEKNNARGKHKNKKKAPKPPRPPKGPSLD 120

Query: 121 AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI 180
           AADR +VKEIAV+AMKKRAR ERMKAL+K+KAEKTSSFNSCIPAMIITFLFFLVII+QGI
Sbjct: 121 AADRMMVKEIAVLAMKKRARAERMKALKKAKAEKTSSFNSCIPAMIITFLFFLVIIIQGI 180

Query: 181 SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA 228
           SSRSS +LQGSPEPAV GSSGFISVQYIKSFPPNESN++NPP  NSAA
Sbjct: 181 SSRSSSILQGSPEPAVGGSSGFISVQYIKSFPPNESNISNPPSFNSAA 228

[Close]

BLAST of Cp4.1LG12g06180.1 vs. ExPASy TrEMBL
Match: A0A6J1GR01 (uncharacterized protein LOC111456647 OS=Cucurbita moschata OX=3662 GN=LOC111456647 PE=4 SV=1)

HSP 1 Score: 429 bits (1104), Expect = 1.38e-151
Identity = 227/228 (99.56%), Postives = 227/228 (99.56%), Query Frame = 0


Query: 1   MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFV 60
           MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNF 
Sbjct: 1   MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFA 60

Query: 61  NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD 120
           NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD
Sbjct: 61  NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD 120

Query: 121 AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI 180
           AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI
Sbjct: 121 AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI 180

Query: 181 SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA 228
           SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA
Sbjct: 181 SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA 228

[Close]

BLAST of Cp4.1LG12g06180.1 vs. ExPASy TrEMBL
Match: A0A6J1JVV1 (uncharacterized protein LOC111488345 OS=Cucurbita maxima OX=3661 GN=LOC111488345 PE=4 SV=1)

HSP 1 Score: 427 bits (1097), Expect = 1.61e-150
Identity = 225/228 (98.68%), Postives = 227/228 (99.56%), Query Frame = 0


Query: 1   MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFV 60
           MALRERDLAFDLESGGRIG+EVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNF 
Sbjct: 1   MALRERDLAFDLESGGRIGEEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFA 60

Query: 61  NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD 120
           NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGP+LD
Sbjct: 61  NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPSLD 120

Query: 121 AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI 180
           AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI
Sbjct: 121 AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI 180

Query: 181 SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA 228
           SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA
Sbjct: 181 SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA 228

[Close]

BLAST of Cp4.1LG12g06180.1 vs. ExPASy TrEMBL
Match: A0A1S4DYQ5 (uncharacterized protein LOC103492741 OS=Cucumis melo OX=3656 GN=LOC103492741 PE=4 SV=1)

HSP 1 Score: 353 bits (906), Expect = 2.05e-121
Identity = 182/228 (79.82%), Postives = 209/228 (91.67%), Query Frame = 0


Query: 1   MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFV 60
           MALRERDL FDLE+GG+I +E GS EPSS KRDVKNIW+RLTED+LLKDE  +ASNSNF 
Sbjct: 1   MALRERDLTFDLENGGKIVEEDGSGEPSSTKRDVKNIWSRLTEDSLLKDERAIASNSNFA 60

Query: 61  NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD 120
           N+VAD++AD ++ LLI+KNLEGEDD E FAH+EK+NARGKHKNKKKALKPPRPPKGP+LD
Sbjct: 61  NTVADIIADESLGLLINKNLEGEDDHEVFAHMEKSNARGKHKNKKKALKPPRPPKGPSLD 120

Query: 121 AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI 180
           AADR +VKE+AV+AMKKRAR ERMKAL+K+KAEKTSSFNSCIPA+IITFLFFLVII+QGI
Sbjct: 121 AADRMMVKELAVLAMKKRARAERMKALKKAKAEKTSSFNSCIPALIITFLFFLVIIIQGI 180

Query: 181 SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA 228
           S RSS +LQGSPEPAV GSSGFISVQYIKSFPP+ES+++NPP  NSAA
Sbjct: 181 SPRSSSILQGSPEPAVGGSSGFISVQYIKSFPPSESDVSNPPSFNSAA 228

[Close]

BLAST of Cp4.1LG12g06180.1 vs. ExPASy TrEMBL
Match: A0A5A7TZQ1 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold427G00780 PE=4 SV=1)

HSP 1 Score: 355 bits (911), Expect = 2.11e-121
Identity = 183/228 (80.26%), Postives = 209/228 (91.67%), Query Frame = 0


Query: 1   MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFV 60
           MALRERDL FDLE+GG+I +E GS EPSS KRDVKNIW+RLTED+LLKDE  +ASNSNF 
Sbjct: 52  MALRERDLTFDLENGGKIVEEDGSGEPSSTKRDVKNIWSRLTEDSLLKDERAIASNSNFA 111

Query: 61  NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD 120
           N+VAD++AD ++ LLIDKNLEGEDD E FAH+EK+NARGKHKNKKKALKPPRPPKGP+LD
Sbjct: 112 NTVADIIADESLGLLIDKNLEGEDDHEVFAHMEKSNARGKHKNKKKALKPPRPPKGPSLD 171

Query: 121 AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI 180
           AADR +VKE+AV+AMKKRAR ERMKAL+K+KAEKTSSFNSCIPA+IITFLFFLVII+QGI
Sbjct: 172 AADRMMVKELAVLAMKKRARAERMKALKKAKAEKTSSFNSCIPALIITFLFFLVIIIQGI 231

Query: 181 SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA 228
           S RSS +LQGSPEPAV GSSGFISVQYIKSFPP+ES+++NPP  NSAA
Sbjct: 232 SPRSSSILQGSPEPAVGGSSGFISVQYIKSFPPSESDVSNPPSFNSAA 279

[Close]

BLAST of Cp4.1LG12g06180.1 vs. ExPASy TrEMBL
Match: A0A5D3D3X4 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001850 PE=4 SV=1)

HSP 1 Score: 351 bits (901), Expect = 7.01e-120
Identity = 182/228 (79.82%), Postives = 208/228 (91.23%), Query Frame = 0


Query: 1   MALRERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFV 60
           MALRERDL FDLE+GG+I +E GS EPSS KRDVKNIW+RLTED+LLKDE  +ASNSNF 
Sbjct: 52  MALRERDLTFDLENGGKIVEEDGSGEPSSTKRDVKNIWSRLTEDSLLKDERAIASNSNFA 111

Query: 61  NSVADVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALD 120
           N+VAD++AD ++ LLIDKNLEGEDD E FAH+EK+NARGKHKNKKKALKPPRPPKGP+LD
Sbjct: 112 NTVADIIADESLGLLIDKNLEGEDDHEVFAHMEKSNARGKHKNKKKALKPPRPPKGPSLD 171

Query: 121 AADRRLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQGI 180
           AADR +VKE+AV+AMKKRAR ERMKAL+K+KAEKTSSFNSCIPA+IITFLFFLVII+QGI
Sbjct: 172 AADRMMVKELAVLAMKKRARAERMKALKKAKAEKTSSFNSCIPALIITFLFFLVIIIQGI 231

Query: 181 SSRSSPMLQGSPEPAVDGSSGFISVQYIKSFPPNESNMANPPDVNSAA 228
           S RSS +LQGSPEPAV GSSGFISVQYIKSFPP+ES+++N P  NSAA
Sbjct: 232 SPRSSSILQGSPEPAVGGSSGFISVQYIKSFPPSESDVSNLPSFNSAA 279

[Close]

BLAST of Cp4.1LG12g06180.1 vs. TAIR 10
Match: AT1G02380.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01960.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-21
Identity = 72/175 (41.14%), Postives = 106/175 (60.57%), Query Frame = 0


Query: 52  VVASNSNFVNSVADVVA-DVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKP 111
           V +  +NF   V++ +A D++  L+ D+N   E   ++    EK    GK K  +KA KP
Sbjct: 36  VWSERANF--GVSEKIADDLSYPLIRDEN-RVETSSQSLDLSEKKCGNGKFKKSRKASKP 95

Query: 112 PRPPKGPALDAADRRLVKEIAVIAMKKRARVERM-KALRKSKAEKTSSFNSCIP--AMII 171
           PRPPKGP+L   DR+++++I  +AM+KRAR+ERM K+L++ KA KTS  + CI   +MII
Sbjct: 96  PRPPKGPSLSENDRKIMRDIQELAMRKRARIERMKKSLKRLKAAKTSPSSPCITIFSMII 155

Query: 172 TFLFFLVIILQGISSRSSPM-LQGSPEPAVDGSSGFISVQYIKSFPPNESNMANP 222
           T +FF  ++ QG S+ SS M    SP P V  ++  ISVQ+   F P E    +P
Sbjct: 156 TAIFFAFLVFQGFSTGSSSMNSDKSPAPTVSPNNQMISVQFYNDFAPVEQTDPSP 207

[Close]

BLAST of Cp4.1LG12g06180.1 vs. TAIR 10
Match: AT4G01960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02380.1); Has 67 Blast hits to 67 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 98.2 bits (243), Expect = 9.0e-21
Identity = 74/212 (34.91%), Postives = 109/212 (51.42%), Query Frame = 0


Query: 5   ERDLAFDLESGGRIGDEVGSVEPSSIKRDVKNIWNRLTEDTLLKDELVVASNSNFVNSVA 64
           E DL  D+E G     +  +    S + D +N+ N +    L  D              +
Sbjct: 9   EEDLDVDIEDGRFNETQEITTNLVSAEGDSENVLNHVWSGRLSFDG-------------S 68

Query: 65  DVVADVNVELLIDKNLEGEDDCEAFAHVEKTNARGKHKNKKKALKPPRPPKGPALDAADR 124
           +  AD  V+ L+ +    E   ++    +      K K  +K  KPPRPPKGP L A D+
Sbjct: 69  EKSADDLVDPLMGEGKRRERSSQSLDLSDMKFDNDKFKKTRKPSKPPRPPKGPLLSANDQ 128

Query: 125 RLVKEIAVIAMKKRARVERMKALRKSKAEKTSSFNSCIPAMIITFLFFLVIILQG-ISSR 184
           +L++EI  +AM+KRAR+ERMK LR+ KA K+SS  S I AMI+T +FF+ +I QG  +S 
Sbjct: 129 KLMREITELAMRKRARIERMKTLRRLKAAKSSSPCSSIFAMIVTVIFFVFLIFQGFFTSN 188

Query: 185 SSPMLQGSPEPAVDGSSGFISVQYIKSFPPNE 216
           +S     SP P    ++  +SVQ+   F P E
Sbjct: 189 ASLNSDNSPAPNNSANNRMVSVQFYNEFAPRE 207

[Close]

BLAST of Cp4.1LG12g06180.1 vs. TAIR 10
Match: AT3G17120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02380.1); Has 67 Blast hits to 67 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 94.0 bits (232), Expect = 1.7e-19
Identity = 69/180 (38.33%), Postives = 101/180 (56.11%), Query Frame = 0


Query: 33  DVKNIWNRLTEDTLLKDELVVASNSNFVNSVADVVADVNVELLIDKNLEGEDDCEAFAHV 92
           D  N++ +  E  +  D   V +    V S+ +  +   V+  I+K   G  D       
Sbjct: 17  DCDNVYTKSPEKPMSPDNKPVITGEESVGSLENDTSP--VQCGINKPGWGRSD------- 76

Query: 93  EKTNARGKHKNKKKALKPPRPPKGPALDAADRRLVKEIAVIAMKKRARVERMKALRKSKA 152
                  K K KK A KPPRPP+GP+LDAAD++L++EIA +AM KRAR+ERM+AL+KS+A
Sbjct: 77  ------RKEKRKKSASKPPRPPRGPSLDAADQKLIREIAELAMLKRARIERMRALKKSRA 136

Query: 153 EKTSSFNSC---IPAMIITFLFFLVIILQGISSRSSPMLQGSPEPAVDG--SSGFISVQY 208
            K +S  S    + A + T +FF V++ QG+S R++    G     V G  + GF+SVQY
Sbjct: 137 AKAASAASSLGNVLATLFTAIFFFVLVFQGLSPRAAGS-SGKSHLVVAGKANGGFVSVQY 180

[Close]

BLAST of Cp4.1LG12g06180.1 vs. TAIR 10
Match: AT3G17120.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 94.0 bits (232), Expect = 1.7e-19
Identity = 69/180 (38.33%), Postives = 101/180 (56.11%), Query Frame = 0


Query: 33  DVKNIWNRLTEDTLLKDELVVASNSNFVNSVADVVADVNVELLIDKNLEGEDDCEAFAHV 92
           D  N++ +  E  +  D   V +    V S+ +  +   V+  I+K   G  D       
Sbjct: 17  DCDNVYTKSPEKPMSPDNKPVITGEESVGSLENDTSP--VQCGINKPGWGRSD------- 76

Query: 93  EKTNARGKHKNKKKALKPPRPPKGPALDAADRRLVKEIAVIAMKKRARVERMKALRKSKA 152
                  K K KK A KPPRPP+GP+LDAAD++L++EIA +AM KRAR+ERM+AL+KS+A
Sbjct: 77  ------RKEKRKKSASKPPRPPRGPSLDAADQKLIREIAELAMLKRARIERMRALKKSRA 136

Query: 153 EKTSSFNSC---IPAMIITFLFFLVIILQGISSRSSPMLQGSPEPAVDG--SSGFISVQY 208
            K +S  S    + A + T +FF V++ QG+S R++    G     V G  + GF+SVQY
Sbjct: 137 AKAASAASSLGNVLATLFTAIFFFVLVFQGLSPRAAGS-SGKSHLVVAGKANGGFVSVQY 180

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g06180.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g06180.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547469.1	7.01e-152	100.00	uncharacterized protein LOC111806405 [Cucurbita pepo subsp. pepo] >XP_023547470....	[more]
KAG7014301.1	2.01e-151	99.56	hypothetical protein SDJN02_24478 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022954398.1	2.86e-151	99.56	uncharacterized protein LOC111456647 [Cucurbita moschata] >XP_022954399.1 unchar...	[more]
XP_022991807.1	3.33e-150	98.68	uncharacterized protein LOC111488345 [Cucurbita maxima] >XP_022991808.1 uncharac...	[more]
XP_038898210.1	5.65e-126	83.33	uncharacterized protein LOC120085950 [Benincasa hispida] >XP_038898211.1 unchara...	[more]

BLAST of Cp4.1LG12g06180.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GR01	1.38e-151	99.56	uncharacterized protein LOC111456647 OS=Cucurbita moschata OX=3662 GN=LOC1114566...	[more]
A0A6J1JVV1	1.61e-150	98.68	uncharacterized protein LOC111488345 OS=Cucurbita maxima OX=3661 GN=LOC111488345...	[more]
A0A1S4DYQ5	2.05e-121	79.82	uncharacterized protein LOC103492741 OS=Cucumis melo OX=3656 GN=LOC103492741 PE=...	[more]
A0A5A7TZQ1	2.11e-121	80.26	Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3D3X4	7.01e-120	79.82	Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Cp4.1LG12g06180.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02380.1	1.1e-21	41.14	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G01960.1	9.0e-21	34.91	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G17120.1	1.7e-19	38.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G17120.2	1.7e-19	38.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..111
None	No IPR available	PANTHER	PTHR34188:SF9	PROTEIN, PUTATIVE-RELATED	coord: 3..218
None	No IPR available	PANTHER	PTHR34188	OS01G0299500 PROTEIN	coord: 3..218

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG12g06180	Cp4.1LG12g06180	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g06180.1:exon:006	Cp4.1LG12g06180.1:exon:006	exon
Cp4.1LG12g06180.1:exon:005	Cp4.1LG12g06180.1:exon:005	exon
Cp4.1LG12g06180.1:exon:004	Cp4.1LG12g06180.1:exon:004	exon
Cp4.1LG12g06180.1:exon:003	Cp4.1LG12g06180.1:exon:003	exon
Cp4.1LG12g06180.1:exon:002	Cp4.1LG12g06180.1:exon:002	exon
Cp4.1LG12g06180.1:exon:001	Cp4.1LG12g06180.1:exon:001	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g06180.1:three_prime_utr:002	Cp4.1LG12g06180.1:three_prime_utr:002	three_prime_UTR
Cp4.1LG12g06180.1:three_prime_utr:001	Cp4.1LG12g06180.1:three_prime_utr:001	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g06180.1:cds:003	Cp4.1LG12g06180.1:cds:003	CDS
Cp4.1LG12g06180.1:cds:002	Cp4.1LG12g06180.1:cds:002	CDS
Cp4.1LG12g06180.1:cds:001	Cp4.1LG12g06180.1:cds:001	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g06180.1:five_prime_utr:003	Cp4.1LG12g06180.1:five_prime_utr:003	five_prime_UTR
Cp4.1LG12g06180.1:five_prime_utr:002	Cp4.1LG12g06180.1:five_prime_utr:002	five_prime_UTR
Cp4.1LG12g06180.1:five_prime_utr:001	Cp4.1LG12g06180.1:five_prime_utr:001	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g06180.1	Cp4.1LG12g06180.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane