
Cp4.1LG12g05740.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAGGCCCACAGTAAAATGGGGATTTCTAAAACCCTAGAAGGTCACTCCCTTTCTCCTTCATAAGCTTATCTTCTCTGTAATTAGCGGCCGAGAAGGGCGAACAGAGAAAAATGGTTTCGCTGAAGCTCCAGAAGAGGCTCGCCTCCAGCGTCCTCAAATGCGGGAGAGGCAAGGTCTGGCTTGATCCCAATGAGGTCAACGAAATCTCCATGGCGAATTCTCGTACGCTTTCTTTGTCTCTGTCTCTTTATCTTAGATTCAATTGTTTCTCTCTGTTCATTGTTCAGTGATTCTCCATGTTGTTGCTTCAACTTCTATTGTTTCGGTTCCTGTTTCTCTTGGATTTTCTAGATGAGATGTTTGCTTTGGGATCTCGAAATTTTCCCTAGTTTATGTCTGAAATCGTTGTTCTCTTGGCTATGATCATATTACTATTTTGGTCCCATTGTCCTTACTAGTTAAAAATCGAGTTAATCGCTTATCCTTTTCTCAACTCCTGGTCCTCTCTATCGCCTTGAAACTAATAACTATATCATACTGAAGTTATGTGGAATCATTTGTAGCAGATTTCTAGGAGATGATTTTGTGTTGTATAGGAAATTGCTGTTATTATTAAACAAATTTTTTTTATTGGTCAATGAAGTTATAAAATTTGTTCTTAGATTCTTCACACTGCTAGAAATGTACTTCTTCCATGGAATTTGTTTCACTTTTCCCCTTTGTTATCCTTCCGAATTCAACAGGCTCTGGGTTTTTTGTTCTAGCGAAATCATTTGATAATTTGATTTGTAGTGGTGATATTATAGTGATGTAAATCATGTTAATTAATGTTGAATTGTTGAGGACAGGCCAAAATATAAGGAAGCTGGTGAAGGATGGTTTCATCATCAGGAAGCCAACCAAGATCCACTCCCGTTCTCGAGCACGGCGCATGAAGGAGGCCAAGAGAAAGGGTCGCCACTCTGGATATGGTACATTTCTTCCGAACTCTCGATTTACATATACGCATCCTGTTTCAGAGAATCTCTTATGTTGTATAATCTTATTTCACTGATTTTCTTCCGTTTGTGATACAAAGTTCTTTGGTACATTTCTTCCGAACTCTCGATTTACATATACGCATCCTGTTTCAGAGAATCTCTTATGTTGTATAATCTTATTTCACTGATTTTCTTCCGTTTGTGATACAAAGTTCTTTGGTACATTTCTTCCGAACTCTCGATTTACATATACGCATCCTGTTTCAGAGAATCTCTTATGTTGTATAATCTTATTTCACTGATTTTCTTCCGTTTGTGATACAAAGTTCTTTGGTACATTTCTTCCGAACTCTCGACTTACATATACGCATCCTGTTTCAGAGAATCTCTTATGTTGTATAATCTTATTTCACTGATTTTCTTCCGTTTGTGATACAAAGTTCTTTATTTAACAACGCATAATTCCTTTTATTGTGTTAAAATTCTCAGTCTAATCGTATTCAGGTAAGCGCAAGGGTACCAGGGAGGCTAGATTGCCAACCAAGATCCTCTGGATGAGGAGAATGCGAGTCCTCAGGAGATTGCTCCGCAAATATAGAGAATCTAAGAAGATCGACAAGCATATGTATCACGATATGTACATGAAAGTGAAGGGTAATGTATTTAAGAACAAGCGTGTGCTGATGGAGAGCATCCACAAGTCGAAGGCCGAGAAAGCGAGAGAGAAGACATTGTCAGATCAATTCGAGGCTAAGAGGGCTAAGAACAAAGCCAGCAGGGAAAGGAAATTTGCTAGGAGGGAGGAACGATTGGCACAGGTTTATTACCCATCTCGCTCTCGATTATTACCGACCCAATGTTTACACCTTCCCATTGCCTCTGTAATTTATATCTCTTCTAACATTGCAGGGACCTGGAGAGAAACAGCCAGCCCAACCAGCCCAACCAGCTGCTGTGTCTCAATCATCTCAGTAAGTATCAATCATCAAATTATATGTAAATCTACCATCATTTTGTGTTATACTAAGAATCTTTTCATCTCGTGCAGGGCGTCGAAGAAATCAAAGAAATGAGAATTTTACTAAACGAGTTCGGGACGTTTACTTCCGATCGTTCTTGCATCCCCATTATTCTAGAATAGTTTTGAGGAGGCTTGCAGCCTTTTTTGTTCACATTTGGACTTTGTTAGTTTATGTTCATCATGTCTTTTTGTCAACCGCGTTTGCTTGATGGAATTTATTTGAGAGATTAAATCCCATATCGATTGTTTTGGGGTGAGTTTTCATTCTTAACTCATTGCTTTACTGTGATAATATCGAATTCATTGACGAAAAAAAAAAAAAAAAAAAAAAAACAATTTATTAGTCGAAAATACAGTCTTCCCGCCTTTATATTAACCGCTACAGACCAGAACTTCTTCATAGTAACAGCCGAGCAAGAAACAAATTCAAATCGCCATCAATGGACAACATCGAGCACAGAACCATCTTCACCAATGGCATAAATATGCACGTCGCTTCCATCGGCGCTGCAACTTCCTGCCCCGCCATTCTCTTCCTCCACGGCTTCCCCGAGTTCTGGTACTCGTGGCGCCACCAGCTCCAATTCTTCTCCAACCTTGGCTACCGTGTCTTTGCTCCCGACCTTCGTGGCTATGGCGACTCCGATTCCCCCATCTTCTTTGCCTCCTACACCATCTTCCACATCGTCGGCGACCTCCTCGGCCTTCTCGACTATTTCACCATCGATCGTGTTTTCTTGGTCGGCCACGATTGGGGGGCTGCTATCGCCTGGGCATTCGCTCTGTTCCGCCCTGAACGAATCAAGGCTCTTGTTGCGTTGAGCGTCCCTTTCACTCCGAGAGATCCAGCCAGAAATTCCGTTGAGTTCTTGAGGGATCAGTTTGGTAATGATTTCTACGTTTGCAGATTCCAGGTAAGATTTCTCCATTTTGGTTCTTGAATTGGCTCCCACATCGATGAATTCGGGTTTCTTGAACCTGAATGGAATCTTTAATTCATCGTTGAATAACATATTGTTCTAAAAAATGTGGCGCAGGAACCTGATATGGTAGAAGAATTTCGTTCCATGGATGCAGCAGATATATTCAAGATTATCTTCTCAATTCATGACCCCAGGCCTCCAATGATACCAAGAGACAGAGGACTTGTAGGGTTCCCTGTTCCAGACACCCTTCCCACCTGGTTGACCGAAGAAGATTTATCTCACTATGCTACCAAGTTCGCCAACAATGGCTTTTATGGTGGATTGAACTACTATCGTGTTCTCAAGCTGTATGTTCTCAGTAACCGTTTAAGCCCACTACTAATAGATATTGAAAGATTATTACAATATGGACGTGATTGATGCAGAAACTGGGAGCTGACAGCGCCGTGGACAAGGTCGATGGTGAGAGTACCGGCGAAGTTTATGATAGGGAAAATGGACCCAACGTACCATATACCCGGGGTGATAGAGTACATACAGAAGGGTGGATTCAAAAGAGACGTGCCGCTGCTGGACACGGTGGTGGAGATTGAAGGAGCTGCTCATTTTTTGAACCAAGAAAGGCCTCACCAAATCAACCAACACATTCATGATTTTATCAAGAGGTTTTGACCCCAACGCCTCCCTGTCCTATACCATTTGCCTTTGTTAACCATCTTGTTCTTCTGCTGCAAACCTCAATGTTGCTGCTCCCATTTTTGGGTGTAAAAAGTTCACCCATATATTTTCAATTCTTTAGTTTCATGTAAGATTAGTTCACAACCCTACTAAAAAAAACTTTTGAAACGTTAATTTACATGTAATA AAGAGGCCCACAGTAAAATGGGGATTTCTAAAACCCTAGAAGGTCACTCCCTTTCTCCTTCATAAGCTTATCTTCTCTGTAATTAGCGGCCGAGAAGGGCGAACAGAGAAAAATGGTTTCGCTGAAGCTCCAGAAGAGGCTCGCCTCCAGCGTCCTCAAATGCGGGAGAGGCAAGGTCTGGCTTGATCCCAATGAGGTCAACGAAATCTCCATGGCGAATTCTCGCCAAAATATAAGGAAGCTGGTGAAGGATGGTTTCATCATCAGGAAGCCAACCAAGATCCACTCCCGTTCTCGAGCACGGCGCATGAAGGAGGCCAAGAGAAAGGGTCGCCACTCTGGATATGGTAAGCGCAAGGGTACCAGGGAGGCTAGATTGCCAACCAAGATCCTCTGGATGAGGAGAATGCGAGTCCTCAGGAGATTGCTCCGCAAATATAGAGAATCTAAGAAGATCGACAAGCATATGTATCACGATATGTACATGAAAGTGAAGGGTAATGTATTTAAGAACAAGCGTGTGCTGATGGAGAGCATCCACAAGTCGAAGGCCGAGAAAGCGAGAGAGAAGACATTGTCAGATCAATTCGAGGCTAAGAGGGCTAAGAACAAAGCCAGCAGGGAAAGGAAATTTGCTAGGAGGGAGGAACGATTGGCACAGGGACCTGGAGAGAAACAGCCAGCCCAACCAGCCCAACCAGCTGCTGTGTCTCAATCATCTCAGGCGTCGAAGAAATCAAAGAAATGAGAATTTTACTAAACGAGTTCGGGACGTTTACTTCCGATCGTTCTTGCATCCCCATTATTCTAGAATAGTTTTGAGGAGGCTTGCAGCCTTTTTTGTTCACATTTGGACTTTGTTAGTTTATGTTCATCATGTCTTTTTGTCAACCGCGTTTGCTTGATGGAATTTATTTGAGAGATTAAATCCCATATCGATTGTTTTGGGGTGAGTTTTCATTCTTAACTCATTGCTTTACTGTGATAATATCGAATTCATTGACGAAAAAAAAAAAAAAAAAAAAAAAACAATTTATTAGTCGAAAATACAGTCTTCCCGCCTTTATATTAACCGCTACAGACCAGAACTTCTTCATAGTAACAGCCGAGCAAGAAACAAATTCAAATCGCCATCAATGGACAACATCGAGCACAGAACCATCTTCACCAATGGCATAAATATGCACGTCGCTTCCATCGGCGCTGCAACTTCCTGCCCCGCCATTCTCTTCCTCCACGGCTTCCCCGAGTTCTGGTACTCGTGGCGCCACCAGCTCCAATTCTTCTCCAACCTTGGCTACCGTGTCTTTGCTCCCGACCTTCGTGGCTATGGCGACTCCGATTCCCCCATCTTCTTTGCCTCCTACACCATCTTCCACATCGTCGGCGACCTCCTCGGCCTTCTCGACTATTTCACCATCGATCGTGTTTTCTTGGTCGGCCACGATTGGGGGGCTGCTATCGCCTGGGCATTCGCTCTGTTCCGCCCTGAACGAATCAAGGCTCTTGTTGCGTTGAGCGTCCCTTTCACTCCGAGAGATCCAGCCAGAAATTCCGTTGAGTTCTTGAGGGATCAGTTTGGTAATGATTTCTACGTTTGCAGATTCCAGGAACCTGATATGGTAGAAGAATTTCGTTCCATGGATGCAGCAGATATATTCAAGATTATCTTCTCAATTCATGACCCCAGGCCTCCAATGATACCAAGAGACAGAGGACTTGTAGGGTTCCCTGTTCCAGACACCCTTCCCACCTGGTTGACCGAAGAAGATTTATCTCACTATGCTACCAAGTTCGCCAACAATGGCTTTTATGGTGGATTGAACTACTATCGTGTTCTCAAGCTAAACTGGGAGCTGACAGCGCCGTGGACAAGGTCGATGGTGAGAGTACCGGCGAAGTTTATGATAGGGAAAATGGACCCAACGTACCATATACCCGGGGTGATAGAGTACATACAGAAGGGTGGATTCAAAAGAGACGTGCCGCTGCTGGACACGGTGGTGGAGATTGAAGGAGCTGCTCATTTTTTGAACCAAGAAAGGCCTCACCAAATCAACCAACACATTCATGATTTTATCAAGAGGTTTTGACCCCAACGCCTCCCTGTCCTATACCATTTGCCTTTGTTAACCATCTTGTTCTTCTGCTGCAAACCTCAATGTTGCTGCTCCCATTTTTGGGTGTAAAAAGTTCACCCATATATTTTCAATTCTTTAGTTTCATGTAAGATTAGTTCACAACCCTACTAAAAAAAACTTTTGAAACGTTAATTTACATGTAATA ATGGACAACATCGAGCACAGAACCATCTTCACCAATGGCATAAATATGCACGTCGCTTCCATCGGCGCTGCAACTTCCTGCCCCGCCATTCTCTTCCTCCACGGCTTCCCCGAGTTCTGGTACTCGTGGCGCCACCAGCTCCAATTCTTCTCCAACCTTGGCTACCGTGTCTTTGCTCCCGACCTTCGTGGCTATGGCGACTCCGATTCCCCCATCTTCTTTGCCTCCTACACCATCTTCCACATCGTCGGCGACCTCCTCGGCCTTCTCGACTATTTCACCATCGATCGTGTTTTCTTGGTCGGCCACGATTGGGGGGCTGCTATCGCCTGGGCATTCGCTCTGTTCCGCCCTGAACGAATCAAGGCTCTTGTTGCGTTGAGCGTCCCTTTCACTCCGAGAGATCCAGCCAGAAATTCCGTTGAGTTCTTGAGGGATCAGTTTGGTAATGATTTCTACGTTTGCAGATTCCAGGAACCTGATATGGTAGAAGAATTTCGTTCCATGGATGCAGCAGATATATTCAAGATTATCTTCTCAATTCATGACCCCAGGCCTCCAATGATACCAAGAGACAGAGGACTTGTAGGGTTCCCTGTTCCAGACACCCTTCCCACCTGGTTGACCGAAGAAGATTTATCTCACTATGCTACCAAGTTCGCCAACAATGGCTTTTATGGTGGATTGAACTACTATCGTGTTCTCAAGCTAAACTGGGAGCTGACAGCGCCGTGGACAAGGTCGATGGTGAGAGTACCGGCGAAGTTTATGATAGGGAAAATGGACCCAACGTACCATATACCCGGGGTGATAGAGTACATACAGAAGGGTGGATTCAAAAGAGACGTGCCGCTGCTGGACACGGTGGTGGAGATTGAAGGAGCTGCTCATTTTTTGAACCAAGAAAGGCCTCACCAAATCAACCAACACATTCATGATTTTATCAAGAGGTTTTGA MDNIEHRTIFTNGINMHVASIGAATSCPAILFLHGFPEFWYSWRHQLQFFSNLGYRVFAPDLRGYGDSDSPIFFASYTIFHIVGDLLGLLDYFTIDRVFLVGHDWGAAIAWAFALFRPERIKALVALSVPFTPRDPARNSVEFLRDQFGNDFYVCRFQEPDMVEEFRSMDAADIFKIIFSIHDPRPPMIPRDRGLVGFPVPDTLPTWLTEEDLSHYATKFANNGFYGGLNYYRVLKLNWELTAPWTRSMVRVPAKFMIGKMDPTYHIPGVIEYIQKGGFKRDVPLLDTVVEIEGAAHFLNQERPHQINQHIHDFIKRF Homology
BLAST of Cp4.1LG12g05740.1 vs. ExPASy Swiss-Prot
Match: I6YGS0 (Epoxide hydrolase A OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=ephA PE=1 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.0e-51 Identity = 118/322 (36.65%), Postives = 164/322 (50.93%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. ExPASy Swiss-Prot
Match: Q6Q2C2 (Bifunctional epoxide hydrolase 2 OS=Sus scrofa OX=9823 GN=EPHX2 PE=2 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 6.2e-41 Identity = 93/308 (30.19%), Postives = 160/308 (51.95%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. ExPASy Swiss-Prot
Match: P34913 (Bifunctional epoxide hydrolase 2 OS=Homo sapiens OX=9606 GN=EPHX2 PE=1 SV=2) HSP 1 Score: 165.2 bits (417), Expect = 1.2e-39 Identity = 90/306 (29.41%), Postives = 152/306 (49.67%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. ExPASy Swiss-Prot
Match: P80299 (Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ephx2 PE=1 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 3.8e-38 Identity = 96/311 (30.87%), Postives = 151/311 (48.55%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. ExPASy Swiss-Prot
Match: P34914 (Bifunctional epoxide hydrolase 2 OS=Mus musculus OX=10090 GN=Ephx2 PE=1 SV=2) HSP 1 Score: 159.8 bits (403), Expect = 4.9e-38 Identity = 95/304 (31.25%), Postives = 144/304 (47.37%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. NCBI nr
Match: XP_023548985.1 (uncharacterized protein LOC111807475 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 669 bits (1725), Expect = 6.40e-243 Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. NCBI nr
Match: XP_022991234.1 (uncharacterized protein LOC111487949 [Cucurbita maxima]) HSP 1 Score: 655 bits (1690), Expect = 1.39e-237 Identity = 312/318 (98.11%), Postives = 315/318 (99.06%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. NCBI nr
Match: XP_022953712.1 (uncharacterized protein LOC111456161 [Cucurbita moschata]) HSP 1 Score: 651 bits (1680), Expect = 4.65e-236 Identity = 311/318 (97.80%), Postives = 313/318 (98.43%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. NCBI nr
Match: KAG6575815.1 (hypothetical protein SDJN03_26454, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 645 bits (1665), Expect = 9.01e-234 Identity = 308/318 (96.86%), Postives = 312/318 (98.11%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. NCBI nr
Match: TQE00339.1 (hypothetical protein C1H46_014066 [Malus baccata]) HSP 1 Score: 419 bits (1077), Expect = 2.99e-144 Identity = 192/319 (60.19%), Postives = 242/319 (75.86%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. ExPASy TrEMBL
Match: A0A6J1JU94 (uncharacterized protein LOC111487949 OS=Cucurbita maxima OX=3661 GN=LOC111487949 PE=4 SV=1) HSP 1 Score: 655 bits (1690), Expect = 6.73e-238 Identity = 312/318 (98.11%), Postives = 315/318 (99.06%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. ExPASy TrEMBL
Match: A0A6J1GP03 (uncharacterized protein LOC111456161 OS=Cucurbita moschata OX=3662 GN=LOC111456161 PE=4 SV=1) HSP 1 Score: 651 bits (1680), Expect = 2.25e-236 Identity = 311/318 (97.80%), Postives = 313/318 (98.43%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. ExPASy TrEMBL
Match: A0A6A2Y0N0 (Histone-lysine N-methyltransferase ATX3-like OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00113124pilonHSYRG00548 PE=4 SV=1) HSP 1 Score: 419 bits (1077), Expect = 1.45e-144 Identity = 194/319 (60.82%), Postives = 239/319 (74.92%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. ExPASy TrEMBL
Match: A0A6A3CI97 (Histone-lysine N-methyltransferase ATX3-like OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00004742pilonHSYRG00014 PE=4 SV=1) HSP 1 Score: 419 bits (1077), Expect = 1.45e-144 Identity = 194/319 (60.82%), Postives = 242/319 (75.86%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. ExPASy TrEMBL
Match: A0A6J1A011 (LOW QUALITY PROTEIN: uncharacterized protein LOC110413678 OS=Herrania umbratica OX=108875 GN=LOC110413678 PE=4 SV=1) HSP 1 Score: 419 bits (1077), Expect = 1.45e-144 Identity = 194/319 (60.82%), Postives = 241/319 (75.55%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. TAIR 10
Match: AT4G02340.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 396.0 bits (1016), Expect = 2.9e-110 Identity = 183/319 (57.37%), Postives = 226/319 (70.85%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. TAIR 10
Match: AT4G15960.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 344.0 bits (881), Expect = 1.3e-94 Identity = 165/324 (50.93%), Postives = 215/324 (66.36%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. TAIR 10
Match: AT3G05600.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 339.0 bits (868), Expect = 4.2e-93 Identity = 160/324 (49.38%), Postives = 208/324 (64.20%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. TAIR 10
Match: AT2G26740.1 (soluble epoxide hydrolase ) HSP 1 Score: 324.3 bits (830), Expect = 1.1e-88 Identity = 161/324 (49.69%), Postives = 217/324 (66.98%), Query Frame = 0
BLAST of Cp4.1LG12g05740.1 vs. TAIR 10
Match: AT2G26750.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 316.2 bits (809), Expect = 2.9e-86 Identity = 159/323 (49.23%), Postives = 213/323 (65.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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