Cp4.1LG11g02440.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g02440.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	auxin-responsive protein SAUR50-like
Location	Cp4.1LG11: 1336769 .. 1337086 (+)
Sequence length	318
RNA-Seq Expression	Cp4.1LG11g02440.1
Synteny	Cp4.1LG11g02440.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTGGTGAAGCAAATTATGAAGCGTTGCTCAGGTTTGAGGAGCAGTAAGAACAAGAACAATCAGCTGCAATGCGGCGGCGTTGGCGGCGGCGGTGCGGGGGAGATTCCGGTGGATGTGCCGAAGGGGCATTTTGTGGTGTATGTGAGTGAGAATAGGAGCCGCTACATCGTGCCGCTCACGGTCTTGACGTCGCCTGAGTTTCAAATTCTTCTCCAATTGGCTGAGGAGGAGTTCGGGTTTAGTCACCATATGGGCCTTACTATCCCTTGCGAGGAACAGGTCTTTCAGTCCCTTACTTCCATGCTCCGATAA

mRNA sequence

ATGGCGGTGGTGAAGCAAATTATGAAGCGTTGCTCAGGTTTGAGGAGCAGTAAGAACAAGAACAATCAGCTGCAATGCGGCGGCGTTGGCGGCGGCGGTGCGGGGGAGATTCCGGTGGATGTGCCGAAGGGGCATTTTGTGGTGTATGTGAGTGAGAATAGGAGCCGCTACATCGTGCCGCTCACGGTCTTGACGTCGCCTGAGTTTCAAATTCTTCTCCAATTGGCTGAGGAGGAGTTCGGGTTTAGTCACCATATGGGCCTTACTATCCCTTGCGAGGAACAGGTCTTTCAGTCCCTTACTTCCATGCTCCGATAA

Coding sequence (CDS)

ATGGCGGTGGTGAAGCAAATTATGAAGCGTTGCTCAGGTTTGAGGAGCAGTAAGAACAAGAACAATCAGCTGCAATGCGGCGGCGTTGGCGGCGGCGGTGCGGGGGAGATTCCGGTGGATGTGCCGAAGGGGCATTTTGTGGTGTATGTGAGTGAGAATAGGAGCCGCTACATCGTGCCGCTCACGGTCTTGACGTCGCCTGAGTTTCAAATTCTTCTCCAATTGGCTGAGGAGGAGTTCGGGTTTAGTCACCATATGGGCCTTACTATCCCTTGCGAGGAACAGGTCTTTCAGTCCCTTACTTCCATGCTCCGATAA

Protein sequence

MAVVKQIMKRCSGLRSSKNKNNQLQCGGVGGGGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR

Homology

[Close]

BLAST of Cp4.1LG11g02440.1 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-28
Identity = 67/106 (63.21%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 2   AVVKQIMKRCSGLRSSKNKNNQLQCGGVGGGGAGE--IPVDVPKGHFVVYVSENRSRYIV 61
           A++KQI+KRCS L            G   GGG  E  +P+DVPKGHF VYV ENRSRYIV
Sbjct: 14  AMLKQILKRCSSL------------GKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIV 73

Query: 62  PLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 106
           P++ LT PEFQ LLQ AEEEFGF H MGLTIPC+E VFQ+LTSM+R
Sbjct: 74  PISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of Cp4.1LG11g02440.1 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.6e-25
Identity = 62/104 (59.62%), Postives = 71/104 (68.27%), Query Frame = 0


Query: 2   AVVKQIMKRCSGLRSSKNKNNQLQCGGVGGGGAGEIPVDVPKGHFVVYVSENRSRYIVPL 61
           A +KQI+KRCS LR  KN N      G       ++P DVPKGHF VYV  NRSRYIVP+
Sbjct: 15  ASIKQIVKRCSSLRKMKNVN------GCYYNQEDDLPQDVPKGHFPVYVGPNRSRYIVPI 74

Query: 62  TVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 106
           + L   EFQ LL+LAEEEFGF H MGLTIPC+E  F+SL SM R
Sbjct: 75  SWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISMFR 112

[Close]

BLAST of Cp4.1LG11g02440.1 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 9.9e-20
Identity = 52/101 (51.49%), Postives = 65/101 (64.36%), Query Frame = 0


Query: 4   VKQIMKRCSGLRSSKNKNNQLQCGGVGGGGAGEIPVDVPKGHFVVYVSENRSRYIVPLTV 63
           +K+I+K+C    SS  KNN              +P DVPKGHFVVYV E R+RYIVP++ 
Sbjct: 16  IKKIIKKC----SSFGKNND----------DSGLPNDVPKGHFVVYVGERRNRYIVPISC 75

Query: 64  LTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSML 105
           L  P FQ LLQ +EEEFGF+H MG+ IPC+E  F S  SM+
Sbjct: 76  LDHPTFQDLLQRSEEEFGFNHDMGIIIPCQEVDFLSFFSMI 102

[Close]

BLAST of Cp4.1LG11g02440.1 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.6e-14
Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 40  DVPKGHFVVYVSENRSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHM-GLTIPCEEQVFQ 99
           D PKG+  VYV E   R+++P++ L  P FQ LL  AEEEFG+ H M GLTIPC E VFQ
Sbjct: 16  DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQ 75

Query: 100 SLTSML 105
            +TS L
Sbjct: 76  CITSCL 81

[Close]

BLAST of Cp4.1LG11g02440.1 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.1e-14
Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 10  RCSGLRSSKNKNNQLQCGGVGGGGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSPEF 69
           R  G+R + +  N+          A    +D PKG+  VYV EN  R+++P++ L  P F
Sbjct: 4   RLPGIRKTLSARNE----------ASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLF 63

Query: 70  QILLQLAEEEFGFSHHM-GLTIPCEEQVFQSLTSML 105
           Q LL  AEEEFG+ H M GLTIPC E +FQ +TS L
Sbjct: 64  QDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCL 89

[Close]

BLAST of Cp4.1LG11g02440.1 vs. NCBI nr
Match: XP_022997035.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 208 bits (530), Expect = 9.12e-68
Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MAVVKQIMKRCSGLRSSKNKNNQLQCGGVGGGGAGEIPVDVPKGHFVVYVSENRSRYIVP 60
           MAVVKQIMKRCSGLRS+KNKNNQLQCGGVGGGG GEIPVDVPKGHFVVYVSENRSRYIVP
Sbjct: 1   MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGTGEIPVDVPKGHFVVYVSENRSRYIVP 60

Query: 61  LTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSML 104
           LTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSML
Sbjct: 61  LTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSML 104

[Close]

BLAST of Cp4.1LG11g02440.1 vs. NCBI nr
Match: XP_022962125.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata])

HSP 1 Score: 205 bits (522), Expect = 1.84e-66
Identity = 104/111 (93.69%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 1   MAVVKQIMKRCSGLRSSKNKNNQLQCGGVGGGG------AGEIPVDVPKGHFVVYVSENR 60
           MAVVKQIMKRCSGLRS+KNKNNQLQCGGVGGGG      AGEIPVDVPKGHFVVYVSENR
Sbjct: 1   MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENR 60

Query: 61  SRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 105
           SRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR
Sbjct: 61  SRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 111

[Close]

BLAST of Cp4.1LG11g02440.1 vs. NCBI nr
Match: KAG6598492.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 204 bits (520), Expect = 3.06e-66
Identity = 101/105 (96.19%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MAVVKQIMKRCSGLRSSKNKNNQLQCGGVGGGGAGEIPVDVPKGHFVVYVSENRSRYIVP 60
           MAVVKQIMKRCSGLRS+KNKNNQLQCGG  G GAGEIPVDVPKGHFVVYVSENRSRYIVP
Sbjct: 1   MAVVKQIMKRCSGLRSNKNKNNQLQCGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVP 60

Query: 61  LTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 105
           LTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR
Sbjct: 61  LTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 105

[Close]

BLAST of Cp4.1LG11g02440.1 vs. NCBI nr
Match: XP_023547122.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 201 bits (512), Expect = 4.07e-65
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 8   MKRCSGLRSSKNKNNQLQCGGVGGGGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSP 67
           MKRCSGLRSSKNKNNQLQCGGVGGGGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSP
Sbjct: 1   MKRCSGLRSSKNKNNQLQCGGVGGGGAGEIPVDVPKGHFVVYVSENRSRYIVPLTVLTSP 60

Query: 68  EFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 105
           EFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR
Sbjct: 61  EFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 98

[Close]

BLAST of Cp4.1LG11g02440.1 vs. NCBI nr
Match: XP_038886317.1 (auxin-responsive protein SAUR50-like [Benincasa hispida])

HSP 1 Score: 171 bits (434), Expect = 4.55e-53
Identity = 87/104 (83.65%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 2   AVVKQIMKRCSGLRSSKNKNNQLQCGGVGGGGAGEIPVDVPKGHFVVYVSENRSRYIVPL 61
           AVVKQI KRCS LR +KNKN  LQCGG       EIPVDVPKGHFVVYVSENRSRYIVPL
Sbjct: 11  AVVKQIKKRCSSLRINKNKNTHLQCGG-----GDEIPVDVPKGHFVVYVSENRSRYIVPL 70

Query: 62  TVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 105
           T LT PEFQILLQLAEEEFGF+H+MGLTIPCEEQVFQSLTSMLR
Sbjct: 71  TFLTRPEFQILLQLAEEEFGFNHNMGLTIPCEEQVFQSLTSMLR 109

[Close]

BLAST of Cp4.1LG11g02440.1 vs. ExPASy TrEMBL
Match: A0A6J1K8F3 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111492083 PE=3 SV=1)

HSP 1 Score: 208 bits (530), Expect = 4.41e-68
Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MAVVKQIMKRCSGLRSSKNKNNQLQCGGVGGGGAGEIPVDVPKGHFVVYVSENRSRYIVP 60
           MAVVKQIMKRCSGLRS+KNKNNQLQCGGVGGGG GEIPVDVPKGHFVVYVSENRSRYIVP
Sbjct: 1   MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGTGEIPVDVPKGHFVVYVSENRSRYIVP 60

Query: 61  LTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSML 104
           LTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSML
Sbjct: 61  LTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSML 104

[Close]

BLAST of Cp4.1LG11g02440.1 vs. ExPASy TrEMBL
Match: A0A6J1HE76 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111462673 PE=3 SV=1)

HSP 1 Score: 205 bits (522), Expect = 8.89e-67
Identity = 104/111 (93.69%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 1   MAVVKQIMKRCSGLRSSKNKNNQLQCGGVGGGG------AGEIPVDVPKGHFVVYVSENR 60
           MAVVKQIMKRCSGLRS+KNKNNQLQCGGVGGGG      AGEIPVDVPKGHFVVYVSENR
Sbjct: 1   MAVVKQIMKRCSGLRSNKNKNNQLQCGGVGGGGGGAGAGAGEIPVDVPKGHFVVYVSENR 60

Query: 61  SRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 105
           SRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR
Sbjct: 61  SRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 111

[Close]

BLAST of Cp4.1LG11g02440.1 vs. ExPASy TrEMBL
Match: A0A0A0LRM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G366710 PE=3 SV=1)

HSP 1 Score: 164 bits (416), Expect = 1.47e-50
Identity = 89/110 (80.91%), Postives = 91/110 (82.73%), Query Frame = 0


Query: 2   AVVKQIMKRCSGLR-SSKNKNNQ-----LQCGGVGGGGAGEIPVDVPKGHFVVYVSENRS 61
           AVVKQI KRCS LR + KNKNN      LQCGG       EIPVDVPKGHFVVYVSENRS
Sbjct: 11  AVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGG-----GEEIPVDVPKGHFVVYVSENRS 70

Query: 62  RYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 105
           RYIVPLT LT PEFQILLQLAEEEFGFSH+MGLTIPCEEQVFQSLTSMLR
Sbjct: 71  RYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR 115

[Close]

BLAST of Cp4.1LG11g02440.1 vs. ExPASy TrEMBL
Match: A0A6J1KJU9 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111496367 PE=3 SV=1)

HSP 1 Score: 164 bits (415), Expect = 2.09e-50
Identity = 80/99 (80.81%), Postives = 87/99 (87.88%), Query Frame = 0


Query: 2   AVVKQIMKRCSGLRSSKNKNNQLQCGGVGGGGAGEIPVDVPKGHFVVYVSENRSRYIVPL 61
           AVVKQIMKRCS LR+ K      QCGG GGGG G+IPVDVPKGHFVVYV ENRSRYIVP+
Sbjct: 11  AVVKQIMKRCSSLRNKKTH----QCGGAGGGGGGDIPVDVPKGHFVVYVGENRSRYIVPV 70

Query: 62  TVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSL 100
           T L++PEFQILLQLAEEEFGFSHHMGLTIPC+E+VFQSL
Sbjct: 71  TFLSTPEFQILLQLAEEEFGFSHHMGLTIPCDEKVFQSL 105

[Close]

BLAST of Cp4.1LG11g02440.1 vs. ExPASy TrEMBL
Match: A0A5A7VD05 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005110 PE=3 SV=1)

HSP 1 Score: 161 bits (408), Expect = 2.77e-49
Identity = 88/111 (79.28%), Postives = 90/111 (81.08%), Query Frame = 0


Query: 2   AVVKQIMKRCSGLR-SSKNKNNQ-------LQCGGVGGGGAGEIPVDVPKGHFVVYVSEN 61
           AVVKQI KRCS LR + KNKNN        LQCGG    G  EIPVDVPKGHFVVYVSEN
Sbjct: 11  AVVKQIKKRCSSLRITKKNKNNNNNNNTHHLQCGG----GGEEIPVDVPKGHFVVYVSEN 70

Query: 62  RSRYIVPLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSML 104
           RSRYIVPLT LT PEFQILLQLAEEEFGFSH MGLTIPCEEQVF+SLTSML
Sbjct: 71  RSRYIVPLTFLTRPEFQILLQLAEEEFGFSHTMGLTIPCEEQVFRSLTSML 117

[Close]

BLAST of Cp4.1LG11g02440.1 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-29
Identity = 67/106 (63.21%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 2   AVVKQIMKRCSGLRSSKNKNNQLQCGGVGGGGAGE--IPVDVPKGHFVVYVSENRSRYIV 61
           A++KQI+KRCS L            G   GGG  E  +P+DVPKGHF VYV ENRSRYIV
Sbjct: 14  AMLKQILKRCSSL------------GKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIV 73

Query: 62  PLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 106
           P++ LT PEFQ LLQ AEEEFGF H MGLTIPC+E VFQ+LTSM+R
Sbjct: 74  PISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of Cp4.1LG11g02440.1 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-29
Identity = 66/104 (63.46%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 2   AVVKQIMKRCSGLRSSKNKNNQLQCGGVGGGGAGEIPVDVPKGHFVVYVSENRSRYIVPL 61
           A++KQI+KRCS L   K ++N      V G      P++VPKGHFVVYV ENR RY+VP+
Sbjct: 13  AMIKQILKRCSSL--GKKQSN------VYGEDENGSPLNVPKGHFVVYVGENRVRYVVPI 72

Query: 62  TVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 106
           + LT PEFQ+LLQ AEEEFGF H MGLTIPCEE VF+SLTSMLR
Sbjct: 73  SFLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 108

[Close]

BLAST of Cp4.1LG11g02440.1 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 120.2 bits (300), Expect = 1.0e-27
Identity = 65/103 (63.11%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 2   AVVKQIMKRCSGLRSSKNKNNQLQCGGVGGGGAGEIPVDVPKGHFVVYVSENRSRYIVPL 61
           A++KQI+KRCS L  +KN     QC    G     +PVDVPKGHF VYV E RSRYIVP+
Sbjct: 13  AMLKQILKRCSSL--AKN-----QCYDEDG-----LPVDVPKGHFPVYVGEKRSRYIVPI 72

Query: 62  TVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSML 105
           + LT P+F+ LLQ AEEEFGF+H MGLTIPCEE VF+SLTSM+
Sbjct: 73  SFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103

[Close]

BLAST of Cp4.1LG11g02440.1 vs. TAIR 10
Match: AT2G16580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.2 bits (295), Expect = 3.9e-27
Identity = 63/106 (59.43%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 2   AVVKQIMKRCSGLRSSKNKNNQLQCGGVGGGGAGEI--PVDVPKGHFVVYVSENRSRYIV 61
           A+++QI+KRCS L     K N       GGGG  E+  P+DVPKGHF VYV  NRSRYIV
Sbjct: 14  AMLRQILKRCSSL----GKKN-------GGGGYEEVDLPLDVPKGHFPVYVGHNRSRYIV 73

Query: 62  PLTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 106
           P++ LT+ +FQ LL+ AEEEFGF H MGLTIPC+E  FQ LTSM+R
Sbjct: 74  PISFLTNLDFQCLLRRAEEEFGFDHDMGLTIPCDELFFQDLTSMIR 108

[Close]

BLAST of Cp4.1LG11g02440.1 vs. TAIR 10
Match: AT2G18010.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 116.7 bits (291), Expect = 1.1e-26
Identity = 62/104 (59.62%), Postives = 71/104 (68.27%), Query Frame = 0


Query: 2   AVVKQIMKRCSGLRSSKNKNNQLQCGGVGGGGAGEIPVDVPKGHFVVYVSENRSRYIVPL 61
           A +KQI+KRCS LR  KN N      G       ++P DVPKGHF VYV  NRSRYIVP+
Sbjct: 15  ASIKQIVKRCSSLRKMKNVN------GCYYNQEDDLPQDVPKGHFPVYVGPNRSRYIVPI 74

Query: 62  TVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 106
           + L   EFQ LL+LAEEEFGF H MGLTIPC+E  F+SL SM R
Sbjct: 75  SWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISMFR 112

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g02440.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	1.5e-28	63.21	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9SL45	1.6e-25	59.62	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P0DKL1	9.9e-20	51.49	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
P33081	1.6e-14	56.06	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P32295	2.1e-14	43.75	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]

BLAST of Cp4.1LG11g02440.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997035.1	9.12e-68	98.08	auxin-responsive protein SAUR50-like [Cucurbita maxima]	[more]
XP_022962125.1	1.84e-66	93.69	auxin-responsive protein SAUR50-like [Cucurbita moschata]	[more]
KAG6598492.1	3.06e-66	96.19	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023547122.1	4.07e-65	100.00	auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]	[more]
XP_038886317.1	4.55e-53	83.65	auxin-responsive protein SAUR50-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG11g02440.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K8F3	4.41e-68	98.08	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111492083...	[more]
A0A6J1HE76	8.89e-67	93.69	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114626...	[more]
A0A0A0LRM7	1.47e-50	80.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G366710 PE=3 SV=1	[more]
A0A6J1KJU9	2.09e-50	80.81	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111496367...	[more]
A0A5A7VD05	2.77e-49	79.28	Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]

BLAST of Cp4.1LG11g02440.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34760.1	1.1e-29	63.21	SAUR-like auxin-responsive protein family	[more]
AT1G75580.1	1.4e-29	63.46	SAUR-like auxin-responsive protein family	[more]
AT2G21220.1	1.0e-27	63.11	SAUR-like auxin-responsive protein family	[more]
AT2G16580.1	3.9e-27	59.43	SAUR-like auxin-responsive protein family	[more]
AT2G18010.1	1.1e-26	59.62	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 26..104 e-value: 1.0E-25 score: 89.7
None	No IPR available	PANTHER	PTHR31374:SF242	AUXIN-INDUCED PROTEIN 15A-LIKE	coord: 2..105
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 2..105

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG11g02440	Cp4.1LG11g02440	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g02440.1:exon:001	Cp4.1LG11g02440.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g02440.1:cds:001	Cp4.1LG11g02440.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g02440.1	Cp4.1LG11g02440.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin