Cp4.1LG11g02310.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g02310.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	26S proteasome regulatory subunit S10B homolog B
Location	Cp4.1LG11: 1183771 .. 1187600 (-)
Sequence length	1788
RNA-Seq Expression	Cp4.1LG11g02310.1
Synteny	Cp4.1LG11g02310.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGAAGGAAAACAATTTGCAGAAAGAGAGAGCATCTAAAGCTTCTTGCTTCCCAAGCTTTCTCTGATAAATCCACGGGAACTTCGAGCATCGACTACCAGTTCGATCACCAAAAATGGCTGATGGAGAAGAAGCCGCACGGCGTCTCACGGCGGTCAATGATTACCGCAAGAAGCTCCTCCAGCACAAAGAGTTAGACGCCAGAGTCGGATCTCGTCTGTCCCTCAATACCCAACTTTCTAATCCGCTCCTGTTTTTATTGTACTCTGTCAATTCTGGTTCTAGTCGTTCCTAAAGGTTTTGGCTCTTCGGAAATGGAAGTCTTATGGACTACGAGATTTATGCATCTTGGTTTTAGAGTGTTGTAATTCAGCCCCCGATTTAACTTTTGGCCCCTGAGAAAGTTCGTGTAGATTCGTGTGGGTATTGGAAAGATGGGGATGATTTGGGAATTGAAAAACGTTTGTGGAGATGATACATTTCTAGGAAGTTATGGGAAATGAGTTTGCGTATTTTGCTACATTTCTATTTTTCTTGTGATATGTGATAATATAAGCTGAAATTCTTGATTGTCTTACGTTTTCTTGAGATATTATCTTTGATTTATGATTTTCAGTGAGGGAGAATTTGCGAGCTGCAAAGAAAGAATTTAACAAGACGGAAGATGATTTGAAGTCTCTGCAAAGTGTTGGCCAGATCATTGGAGAAGTTCTCAGGCCACTTGACAACGAACGCTGTATATTTTCTTGTTATTCCTTGTATTTGTTCATATGGAAAGTTACCTCAAATTGGTTGATAATTTGGTGGATGTCTCTGCCTTTGTGATTTCAGTGATTGTCAAAGCAAGCAGTGGACCGAGGTATGTGGTTGGATGCCGCAGTAAGGTGGATAAAGAAAAATTAACATCTGGTACTAGAGTTGTTCTTGATATGACAACACTCACCATTATGAGGGCTCTTCCACGTGAAGTAAGTTAGATTTATTGTGTGTACTCCATGATTATATAGGATAAGGAACGAAGGTAGTAACCTCTAATGCACGATTGTCCTAAATGTTTTGATCTAATTTGATCTGATAGGTAGATCCCGTCGTGTATAATATGTTGCGCGAAGATCCTGGCAATGTTAGCTATTCTGCTGTGGGTGGCTTATCTGATCAAATTAGGGAACTTAGGGAGTCCATTGAGCTACCTCTCATGAATCCTGAGCTTTTCCTTAGAGTTGGCATCAAACCTCCCAAGGTATTTCCTCTCTCGCGCGCACGGTTGACGGGTTTACCAAATTCTGGTTTTCTAGCTAATAATTTCTGCATTTTTATTCTAAGGGTGTTCTTCTGTATGGCCCTCCTGGTACTGGCAAGACATTGTTAGCAAGAGCAATTGCAAGCAACATAGATGCCAACTTCTTAAAGGTTGAATTTTCTCCAAATACTGAAATGGATGCCAACTTTAATCTTCCCCTCCTTCCTAGTTAAGGTATAACTATTAGCTTCTATCTTCGCTTTAGGTTGTATCGAGTGCTATAATTGATAAGTACATTGGAGAAAGTGCGAGGTTAATCCGCGAAATGTTTGGATATGCACGTGATCACCAGGTAAGTTCTGATGTGGTATGAAGTTGTTTTGTTATGATTTCGTACGAAAATTGTGACTCATAAGTCATTCACCAATCTTTTCTGTGCTTAGCCCTGCATAATTTTTATGGACGAGATTGATGCCATTGGTGGGCGGAGATTCAGTGAAGGAACAAGTGCAGATCGTGAAATTCAGCGAACGTTGATGGAGTTACTTAATCAGCTTGATGGTTTTGATCAACTTGGTAAGGTATGTCCAAATCTTCTGATCCCTTGTTTGTTCTTTTGGGAATTCCAGACTTTTCTCGTACATATTTAGCTTCCAACGTTTGTTATGAAGGTATCTTTGATATTTAGATATTCAAGTATCTTATGAACATCGGTACCCGAAAATCCCATGAGATGATAGAATACTATATCTTAGTATTGTTGGAATAACACACAATTATTAAATGTGTTAACCTAGACGATGTTCGTTGAATTACTTCTGTGATTCTTTAATTGTTATAACCTTTTTTGTATTGAAAGTTTTTAAAACGACTGAATGAAAGTTTTTATAGTATTTTTGTTTATATACTGAATTTCCGAGGTCTAGTATAGAGGATTGTAACAACTCAAGCCCACCGCTAGCAGATATTGTCTTCTTTGGGTTTTTCCTTTCGAGCTTCCCCTCAAGGTTTTTAAAACGAGACTGCTAGGAAAAGGTTTCCACACCCTTATAAAAAATGCTTCGTTCTGTTGTTCCCCAACTGATGTGGAATCTCACAACTATCCTCCTAGTAGTAACCAAGGCTGCATAATGAATTTCTGGTCTTCGGCATATACAAAGAATGTGTTCTTTTTCTGATTTTGGTTGTCTTGCCTGTGTGGTACAAGGTCGTATGCCTTGTGAAGATATTTTTTTTATAAGAAACTGAGAAAACCATATATCTACACAAAAACACACGAACATGTTGCCTTGTGAAGATATAAGTATGAGGCGTTTGATCTTGATCATGTTCCCGATCATGCCATGGCTTAACTGTTTGTCTCCTTATTCTGATTTCTTTTACTGCGATCATCTTTTTCCAAATTTGTGTTTTCCTAACACAAGATGATTACTTTGAGGATACCATAGGTCAAAATGATAATGGCTACAAACAGACCGGATGTTCTGGACCCTGCACTTCTTCGGCCAGGACGATTGGACCGTAAAATTGAGATACCTTTGCCGAATGAGCAATCCAGAACGGAGATCCTTAAGATTCATGCTGCTGGAATTGCGAAGCATGGTGAAATCGACTATGAAGCTGTTGTAAAGCTTGCAGAGGTAACCCTGCTAGTTTTCTTGTTTAATTGATTTCTTTTAGTAGCTTTGTCCATAATCTGTTATGCATAAAACTATCCTCTGTGTAGGGATTTAATGGAGCTGATATGCGGAATGTCTGCACCGAAGCTGGAATGTCGGCTATTCGAGCCGAACGTGACTATGTCATCCACGAAGATTTCATGAAGGTTACTTTTTCTTTCTCGTCTTTAGTAGTCATCGTATTCAAACAGATCCCTACAGAGAGATGGCATTTTCTTCTCATACTCACTTTCATCGTCTTGTGATGTTCAGGCAGTACGAAAACTGAACGAAGCAAAGAAACTCGAGTCCAGTTCGCACTATAACGCCGATTTTGGGAAGGATTAAAGCAATGTAAGGAGTCTTTGTAGCCAAAATCTTTGCAGGGAACAATGCACTCTTGGGATGCATGCAAAAAATGAGCTATTCCTGGTATCAATTATGTTTTTCTACGAACTATAGGAACCTGTTGTATCTGATCACAGACGATGATATGAACATTCATGAAAATCTAGCCATTCTTCTTTCTTATTTTATTCCCTGTTCTTGTGGGCTAAACAGATTGTTATTCACCCTGCCTTAATCTTTCTTGTTAATGTACTCATTGAAAAGATATAAAGCTGAGATGAAATGGTTCATTGTGATTTTCATTAATCTAAACATGATCATCTGCAGCTCAGTTTACAGAATACACAGTTCATTGCAAAGTTCTTGCACTGTTTTTGTTTGCAGTGTCACTGTTCCCAAGATACTGATGGGATTTGATGAACATAAAATTGTAAGAGTTCTATCTTTTTGTTGATTCCTTAGCTGAGATTAACTGTTCTTCGATGTAGATCTGTTGTTGAGTTTGAATCTGACCATTCTCACGATCTTGTAAAACCAGTAGGCACTGACAAGCTGCAATCCTAGAGCCATGGCCTGTGAATTAT

mRNA sequence

GCAGAAGGAAAACAATTTGCAGAAAGAGAGAGCATCTAAAGCTTCTTGCTTCCCAAGCTTTCTCTGATAAATCCACGGGAACTTCGAGCATCGACTACCAGTTCGATCACCAAAAATGGCTGATGGAGAAGAAGCCGCACGGCGTCTCACGGCGGTCAATGATTACCGCAAGAAGCTCCTCCAGCACAAAGAGTTAGACGCCAGAGTCGGATCTCTGAGGGAGAATTTGCGAGCTGCAAAGAAAGAATTTAACAAGACGGAAGATGATTTGAAGTCTCTGCAAAGTGTTGGCCAGATCATTGGAGAAGTTCTCAGGCCACTTGACAACGAACGCTTGATTGTCAAAGCAAGCAGTGGACCGAGGTATGTGGTTGGATGCCGCAGTAAGGTGGATAAAGAAAAATTAACATCTGGTACTAGAGTTGTTCTTGATATGACAACACTCACCATTATGAGGGCTCTTCCACGTGAAGTAGATCCCGTCGTGTATAATATGTTGCGCGAAGATCCTGGCAATGTTAGCTATTCTGCTGTGGGTGGCTTATCTGATCAAATTAGGGAACTTAGGGAGTCCATTGAGCTACCTCTCATGAATCCTGAGCTTTTCCTTAGAGTTGGCATCAAACCTCCCAAGGGTGTTCTTCTGTATGGCCCTCCTGGTACTGGCAAGACATTGTTAGCAAGAGCAATTGCAAGCAACATAGATGCCAACTTCTTAAAGGTTGTATCGAGTGCTATAATTGATAAGTACATTGGAGAAAGTGCGAGGTTAATCCGCGAAATGTTTGGATATGCACGTGATCACCAGCCCTGCATAATTTTTATGGACGAGATTGATGCCATTGGTGGGCGGAGATTCAGTGAAGGAACAAGTGCAGATCGTGAAATTCAGCGAACGTTGATGGAGTTACTTAATCAGCTTGATGGTTTTGATCAACTTGGTAAGGTCAAAATGATAATGGCTACAAACAGACCGGATGTTCTGGACCCTGCACTTCTTCGGCCAGGACGATTGGACCGTAAAATTGAGATACCTTTGCCGAATGAGCAATCCAGAACGGAGATCCTTAAGATTCATGCTGCTGGAATTGCGAAGCATGGTGAAATCGACTATGAAGCTGTTGTAAAGCTTGCAGAGGGATTTAATGGAGCTGATATGCGGAATGTCTGCACCGAAGCTGGAATGTCGGCTATTCGAGCCGAACGTGACTATGTCATCCACGAAGATTTCATGAAGGCAGTACGAAAACTGAACGAAGCAAAGAAACTCGAGTCCAGTTCGCACTATAACGCCGATTTTGGGAAGGATTAAAGCAATGTAAGGAGTCTTTGTAGCCAAAATCTTTGCAGGGAACAATGCACTCTTGGGATGCATGCAAAAAATGAGCTATTCCTGGTATCAATTATGTTTTTCTACGAACTATAGGAACCTGTTGTATCTGATCACAGACGATGATATGAACATTCATGAAAATCTAGCCATTCTTCTTTCTTATTTTATTCCCTGTTCTTGTGGGCTAAACAGATTGTTATTCACCCTGCCTTAATCTTTCTTGTTAATGTACTCATTGAAAAGATATAAAGCTGAGATGAAATGGTTCATTGTGATTTTCATTAATCTAAACATGATCATCTGCAGCTCAGTTTACAGAATACACAGTTCATTGCAAAGTTCTTGCACTGTTTTTGTTTGCAGTGTCACTGTTCCCAAGATACTGATGGGATTTGATGAACATAAAATTTAGGCACTGACAAGCTGCAATCCTAGAGCCATGGCCTGTGAATTAT

Coding sequence (CDS)

ATGGCTGATGGAGAAGAAGCCGCACGGCGTCTCACGGCGGTCAATGATTACCGCAAGAAGCTCCTCCAGCACAAAGAGTTAGACGCCAGAGTCGGATCTCTGAGGGAGAATTTGCGAGCTGCAAAGAAAGAATTTAACAAGACGGAAGATGATTTGAAGTCTCTGCAAAGTGTTGGCCAGATCATTGGAGAAGTTCTCAGGCCACTTGACAACGAACGCTTGATTGTCAAAGCAAGCAGTGGACCGAGGTATGTGGTTGGATGCCGCAGTAAGGTGGATAAAGAAAAATTAACATCTGGTACTAGAGTTGTTCTTGATATGACAACACTCACCATTATGAGGGCTCTTCCACGTGAAGTAGATCCCGTCGTGTATAATATGTTGCGCGAAGATCCTGGCAATGTTAGCTATTCTGCTGTGGGTGGCTTATCTGATCAAATTAGGGAACTTAGGGAGTCCATTGAGCTACCTCTCATGAATCCTGAGCTTTTCCTTAGAGTTGGCATCAAACCTCCCAAGGGTGTTCTTCTGTATGGCCCTCCTGGTACTGGCAAGACATTGTTAGCAAGAGCAATTGCAAGCAACATAGATGCCAACTTCTTAAAGGTTGTATCGAGTGCTATAATTGATAAGTACATTGGAGAAAGTGCGAGGTTAATCCGCGAAATGTTTGGATATGCACGTGATCACCAGCCCTGCATAATTTTTATGGACGAGATTGATGCCATTGGTGGGCGGAGATTCAGTGAAGGAACAAGTGCAGATCGTGAAATTCAGCGAACGTTGATGGAGTTACTTAATCAGCTTGATGGTTTTGATCAACTTGGTAAGGTCAAAATGATAATGGCTACAAACAGACCGGATGTTCTGGACCCTGCACTTCTTCGGCCAGGACGATTGGACCGTAAAATTGAGATACCTTTGCCGAATGAGCAATCCAGAACGGAGATCCTTAAGATTCATGCTGCTGGAATTGCGAAGCATGGTGAAATCGACTATGAAGCTGTTGTAAAGCTTGCAGAGGGATTTAATGGAGCTGATATGCGGAATGTCTGCACCGAAGCTGGAATGTCGGCTATTCGAGCCGAACGTGACTATGTCATCCACGAAGATTTCATGAAGGCAGTACGAAAACTGAACGAAGCAAAGAAACTCGAGTCCAGTTCGCACTATAACGCCGATTTTGGGAAGGATTAA

Protein sequence

MADGEEAARRLTAVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD

Homology

[Close]

BLAST of Cp4.1LG11g02310.1 vs. ExPASy Swiss-Prot
Match: Q9MAK9 (26S proteasome regulatory subunit S10B homolog B OS=Arabidopsis thaliana OX=3702 GN=RPT4B PE=1 SV=1)

HSP 1 Score: 733.0 bits (1891), Expect = 1.8e-210
Identity = 373/399 (93.48%), Postives = 387/399 (96.99%), Query Frame = 0


Query: 1   MADGEEAARRLT-AVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVG 60
           M+DG++AARR T AV DYRKKLL HKEL++RV + RENLRAAKKEFNKTEDDLKSLQSVG
Sbjct: 1   MSDGDDAARRRTAAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVG 60

Query: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120
           QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE
Sbjct: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120

Query: 121 VDPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180
           VDPVVYNML EDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
Sbjct: 121 VDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180

Query: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE 240
           PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240

Query: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 300
           IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR
Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 300

Query: 301 LDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSA 360
           LDRKIEIPLPNEQSR EILKIHA+GIAKHGEIDYEA+VKL EGFNGAD+RN+CTEAGM A
Sbjct: 301 LDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFA 360

Query: 361 IRAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 399
           IRAERDYVIHEDFMKAVRKL+EAKKLESSSHYNADFGK+
Sbjct: 361 IRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399

[Close]

BLAST of Cp4.1LG11g02310.1 vs. ExPASy Swiss-Prot
Match: Q9SEI3 (26S proteasome regulatory subunit 10B homolog A OS=Arabidopsis thaliana OX=3702 GN=RPT4A PE=1 SV=1)

HSP 1 Score: 726.5 bits (1874), Expect = 1.7e-208
Identity = 370/399 (92.73%), Postives = 385/399 (96.49%), Query Frame = 0


Query: 1   MADGEEAARRLT-AVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVG 60
           M D +E+ RR T AV++YRKKLLQHKEL++RV + RENLR AKKEFNKTEDDLKSLQSVG
Sbjct: 1   MTDVDESVRRRTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSVG 60

Query: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120
           QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE
Sbjct: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120

Query: 121 VDPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180
           VDPVVYNML EDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
Sbjct: 121 VDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180

Query: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE 240
           PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240

Query: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 300
           IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD LGKVKMIMATNRPDVLDPALLRPGR
Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGR 300

Query: 301 LDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSA 360
           LDRKIEIPLPNEQSR +ILKIHAAGIAKHGEIDYEA+VKLAEGFNGAD+RN+CTEAGM A
Sbjct: 301 LDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFA 360

Query: 361 IRAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 399
           IRAERDYVIHEDFMKAVRKL+EAKKLESSSHYNADFGK+
Sbjct: 361 IRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399

[Close]

BLAST of Cp4.1LG11g02310.1 vs. ExPASy Swiss-Prot
Match: P62333 (26S proteasome regulatory subunit 10B OS=Homo sapiens OX=9606 GN=PSMC6 PE=1 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 2.0e-169
Identity = 295/379 (77.84%), Postives = 333/379 (87.86%), Query Frame = 0


Query: 13  AVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNE 72
           A+ DYRKKLL+HKE+D R+  LRE L+   K++ K+E+DLK+LQSVGQI+GEVL+ L  E
Sbjct: 8   ALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEE 67

Query: 73  RLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLREDP 132
           + IVKA++GPRYVVGCR ++DK KL  GTRV LDMTTLTIMR LPREVDP+VYNM  EDP
Sbjct: 68  KFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 127

Query: 133 GNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAI 192
           GNVSYS +GGLS+QIRELRE IELPL NPELF RVGI PPKG LLYGPPGTGKTLLARA+
Sbjct: 128 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187

Query: 193 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 252
           AS +D NFLKVVSS+I+DKYIGESARLIREMF YARDHQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247

Query: 253 SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 312
           SADREIQRTLMELLNQ+DGFD L +VKMIMATNRPD LDPALLRPGRLDRKI I LPNEQ
Sbjct: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 307

Query: 313 SRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAIRAERDYVIHEDF 372
           +R +ILKIHA  I KHGEIDYEA+VKL++GFNGAD+RNVCTEAGM AIRA+ D+V+ EDF
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDF 367

Query: 373 MKAVRKLNEAKKLESSSHY 392
           MKAVRK+ ++KKLES   Y
Sbjct: 368 MKAVRKVADSKKLESKLDY 386

[Close]

BLAST of Cp4.1LG11g02310.1 vs. ExPASy Swiss-Prot
Match: P62335 (26S proteasome regulatory subunit 10B OS=Ictidomys tridecemlineatus OX=43179 GN=PSMC6 PE=2 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 2.0e-169
Identity = 295/379 (77.84%), Postives = 333/379 (87.86%), Query Frame = 0


Query: 13  AVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNE 72
           A+ DYRKKLL+HKE+D R+  LRE L+   K++ K+E+DLK+LQSVGQI+GEVL+ L  E
Sbjct: 8   ALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEE 67

Query: 73  RLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLREDP 132
           + IVKA++GPRYVVGCR ++DK KL  GTRV LDMTTLTIMR LPREVDP+VYNM  EDP
Sbjct: 68  KFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 127

Query: 133 GNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAI 192
           GNVSYS +GGLS+QIRELRE IELPL NPELF RVGI PPKG LLYGPPGTGKTLLARA+
Sbjct: 128 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187

Query: 193 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 252
           AS +D NFLKVVSS+I+DKYIGESARLIREMF YARDHQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247

Query: 253 SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 312
           SADREIQRTLMELLNQ+DGFD L +VKMIMATNRPD LDPALLRPGRLDRKI I LPNEQ
Sbjct: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 307

Query: 313 SRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAIRAERDYVIHEDF 372
           +R +ILKIHA  I KHGEIDYEA+VKL++GFNGAD+RNVCTEAGM AIRA+ D+V+ EDF
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDF 367

Query: 373 MKAVRKLNEAKKLESSSHY 392
           MKAVRK+ ++KKLES   Y
Sbjct: 368 MKAVRKVADSKKLESKLDY 386

[Close]

BLAST of Cp4.1LG11g02310.1 vs. ExPASy Swiss-Prot
Match: P62334 (26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 2.0e-169
Identity = 295/379 (77.84%), Postives = 333/379 (87.86%), Query Frame = 0


Query: 13  AVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNE 72
           A+ DYRKKLL+HKE+D R+  LRE L+   K++ K+E+DLK+LQSVGQI+GEVL+ L  E
Sbjct: 8   ALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEE 67

Query: 73  RLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLREDP 132
           + IVKA++GPRYVVGCR ++DK KL  GTRV LDMTTLTIMR LPREVDP+VYNM  EDP
Sbjct: 68  KFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDP 127

Query: 133 GNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAI 192
           GNVSYS +GGLS+QIRELRE IELPL NPELF RVGI PPKG LLYGPPGTGKTLLARA+
Sbjct: 128 GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAV 187

Query: 193 ASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT 252
           AS +D NFLKVVSS+I+DKYIGESARLIREMF YARDHQPCIIFMDEIDAIGGRRFSEGT
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247

Query: 253 SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 312
           SADREIQRTLMELLNQ+DGFD L +VKMIMATNRPD LDPALLRPGRLDRKI I LPNEQ
Sbjct: 248 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 307

Query: 313 SRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAIRAERDYVIHEDF 372
           +R +ILKIHA  I KHGEIDYEA+VKL++GFNGAD+RNVCTEAGM AIRA+ D+V+ EDF
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDF 367

Query: 373 MKAVRKLNEAKKLESSSHY 392
           MKAVRK+ ++KKLES   Y
Sbjct: 368 MKAVRKVADSKKLESKLDY 386

[Close]

BLAST of Cp4.1LG11g02310.1 vs. NCBI nr
Match: XP_023545986.1 (26S proteasome regulatory subunit S10B homolog B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 771 bits (1991), Expect = 9.39e-281
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0


Query: 1   MADGEEAARRLTAVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MADGEEAARRLTAVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRLTAVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI 360
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 398
           RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 398

[Close]

BLAST of Cp4.1LG11g02310.1 vs. NCBI nr
Match: XP_022961947.1 (26S proteasome regulatory subunit S10B homolog B [Cucurbita moschata])

HSP 1 Score: 768 bits (1983), Expect = 1.56e-279
Identity = 397/398 (99.75%), Postives = 397/398 (99.75%), Query Frame = 0


Query: 1   MADGEEAARRLTAVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MADGEEAARRLTAVNDYRKKLLQHKELDARV SLRENLRAAKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRLTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI 360
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 398
           RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 398

[Close]

BLAST of Cp4.1LG11g02310.1 vs. NCBI nr
Match: XP_022996644.1 (26S proteasome regulatory subunit S10B homolog B [Cucurbita maxima])

HSP 1 Score: 765 bits (1976), Expect = 1.82e-278
Identity = 396/398 (99.50%), Postives = 396/398 (99.50%), Query Frame = 0


Query: 1   MADGEEAARRLTAVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MADGEEAARR TAVNDYRKKLLQHKELDARV SLRENLRAAKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI 360
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 398
           RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 398

[Close]

BLAST of Cp4.1LG11g02310.1 vs. NCBI nr
Match: KAG7029405.1 (26S protease regulatory subunit S10B-like B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 763 bits (1971), Expect = 1.05e-277
Identity = 394/398 (98.99%), Postives = 395/398 (99.25%), Query Frame = 0


Query: 1   MADGEEAARRLTAVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MADGEEAARRLTAVNDYRKKLLQHKELDARV SLRENLR AKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRLTAVNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRTKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNML EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI 360
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 398
           RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 398

[Close]

BLAST of Cp4.1LG11g02310.1 vs. NCBI nr
Match: XP_022961948.1 (26S proteasome regulatory subunit S10B homolog B-like [Cucurbita moschata] >XP_022996646.1 26S proteasome regulatory subunit S10B homolog B-like [Cucurbita maxima] >XP_023545987.1 26S proteasome regulatory subunit S10B homolog B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 759 bits (1960), Expect = 4.98e-276
Identity = 391/398 (98.24%), Postives = 395/398 (99.25%), Query Frame = 0


Query: 1   MADGEEAARRLTAVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MADGEEAARRLTAVNDYRKKLLQHKELDARV SLRENLR AKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRLTAVNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRTKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNML EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI 360
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD+RNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 398
           RAERDYVIHEDFMKAVRKLNEAKKLESS+HY+ADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of Cp4.1LG11g02310.1 vs. ExPASy TrEMBL
Match: A0A6J1HBG5 (26S proteasome regulatory subunit S10B homolog B OS=Cucurbita moschata OX=3662 GN=LOC111462569 PE=3 SV=1)

HSP 1 Score: 768 bits (1983), Expect = 7.54e-280
Identity = 397/398 (99.75%), Postives = 397/398 (99.75%), Query Frame = 0


Query: 1   MADGEEAARRLTAVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MADGEEAARRLTAVNDYRKKLLQHKELDARV SLRENLRAAKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRLTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI 360
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 398
           RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 398

[Close]

BLAST of Cp4.1LG11g02310.1 vs. ExPASy TrEMBL
Match: A0A6J1K9B1 (26S proteasome regulatory subunit S10B homolog B OS=Cucurbita maxima OX=3661 GN=LOC111491825 PE=3 SV=1)

HSP 1 Score: 765 bits (1976), Expect = 8.79e-279
Identity = 396/398 (99.50%), Postives = 396/398 (99.50%), Query Frame = 0


Query: 1   MADGEEAARRLTAVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MADGEEAARR TAVNDYRKKLLQHKELDARV SLRENLRAAKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI 360
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 398
           RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 398

[Close]

BLAST of Cp4.1LG11g02310.1 vs. ExPASy TrEMBL
Match: A0A6J1K5D4 (26S proteasome regulatory subunit S10B homolog B-like OS=Cucurbita maxima OX=3661 GN=LOC111491827 PE=3 SV=1)

HSP 1 Score: 759 bits (1960), Expect = 2.41e-276
Identity = 391/398 (98.24%), Postives = 395/398 (99.25%), Query Frame = 0


Query: 1   MADGEEAARRLTAVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MADGEEAARRLTAVNDYRKKLLQHKELDARV SLRENLR AKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRLTAVNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRTKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNML EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI 360
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD+RNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 398
           RAERDYVIHEDFMKAVRKLNEAKKLESS+HY+ADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of Cp4.1LG11g02310.1 vs. ExPASy TrEMBL
Match: A0A6J1HDB8 (26S proteasome regulatory subunit S10B homolog B-like OS=Cucurbita moschata OX=3662 GN=LOC111462570 PE=3 SV=1)

HSP 1 Score: 759 bits (1960), Expect = 2.41e-276
Identity = 391/398 (98.24%), Postives = 395/398 (99.25%), Query Frame = 0


Query: 1   MADGEEAARRLTAVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MADGEEAARRLTAVNDYRKKLLQHKELDARV SLRENLR AKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRLTAVNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRTKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNML EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI 360
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD+RNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 398
           RAERDYVIHEDFMKAVRKLNEAKKLESS+HY+ADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of Cp4.1LG11g02310.1 vs. ExPASy TrEMBL
Match: A0A0A0LNP0 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362420 PE=3 SV=1)

HSP 1 Score: 757 bits (1955), Expect = 1.40e-275
Identity = 390/398 (97.99%), Postives = 395/398 (99.25%), Query Frame = 0


Query: 1   MADGEEAARRLTAVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60
           MADGE+AARR TAVNDYRKKLLQHKEL+ARV SLRENLRAAKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEDAARRHTAVNDYRKKLLQHKELEARVRSLRENLRAAKKEFNKTEDDLKSLQSVGQ 60

Query: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120
           IIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 121 DPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180
           DPVVYNML EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAI 360
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGAD+RNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360

Query: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 398
           RAERDYVIHEDFMKAVRKLNEAKKLESS+HYNADFGKD
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKD 398

[Close]

BLAST of Cp4.1LG11g02310.1 vs. TAIR 10
Match: AT1G45000.1 (AAA-type ATPase family protein )

HSP 1 Score: 733.0 bits (1891), Expect = 1.3e-211
Identity = 373/399 (93.48%), Postives = 387/399 (96.99%), Query Frame = 0


Query: 1   MADGEEAARRLT-AVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVG 60
           M+DG++AARR T AV DYRKKLL HKEL++RV + RENLRAAKKEFNKTEDDLKSLQSVG
Sbjct: 1   MSDGDDAARRRTAAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVG 60

Query: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120
           QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE
Sbjct: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120

Query: 121 VDPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180
           VDPVVYNML EDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
Sbjct: 121 VDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180

Query: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE 240
           PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240

Query: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 300
           IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR
Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 300

Query: 301 LDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSA 360
           LDRKIEIPLPNEQSR EILKIHA+GIAKHGEIDYEA+VKL EGFNGAD+RN+CTEAGM A
Sbjct: 301 LDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFA 360

Query: 361 IRAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 399
           IRAERDYVIHEDFMKAVRKL+EAKKLESSSHYNADFGK+
Sbjct: 361 IRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399

[Close]

BLAST of Cp4.1LG11g02310.1 vs. TAIR 10
Match: AT5G43010.1 (regulatory particle triple-A ATPase 4A )

HSP 1 Score: 726.5 bits (1874), Expect = 1.2e-209
Identity = 370/399 (92.73%), Postives = 385/399 (96.49%), Query Frame = 0


Query: 1   MADGEEAARRLT-AVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVG 60
           M D +E+ RR T AV++YRKKLLQHKEL++RV + RENLR AKKEFNKTEDDLKSLQSVG
Sbjct: 1   MTDVDESVRRRTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSVG 60

Query: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120
           QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE
Sbjct: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120

Query: 121 VDPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180
           VDPVVYNML EDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
Sbjct: 121 VDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180

Query: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE 240
           PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240

Query: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 300
           IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD LGKVKMIMATNRPDVLDPALLRPGR
Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGR 300

Query: 301 LDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSA 360
           LDRKIEIPLPNEQSR +ILKIHAAGIAKHGEIDYEA+VKLAEGFNGAD+RN+CTEAGM A
Sbjct: 301 LDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFA 360

Query: 361 IRAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 399
           IRAERDYVIHEDFMKAVRKL+EAKKLESSSHYNADFGK+
Sbjct: 361 IRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399

[Close]

BLAST of Cp4.1LG11g02310.1 vs. TAIR 10
Match: AT1G45000.2 (AAA-type ATPase family protein )

HSP 1 Score: 585.9 bits (1509), Expect = 2.5e-167
Identity = 313/399 (78.45%), Postives = 325/399 (81.45%), Query Frame = 0


Query: 1   MADGEEAARRLT-AVNDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVG 60
           M+DG++AARR T AV DYRKKLL HKEL++RV + RENLRAAKKEFNKTEDDLKSLQSVG
Sbjct: 1   MSDGDDAARRRTAAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVG 60

Query: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120
           QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE
Sbjct: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120

Query: 121 VDPVVYNMLREDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180
           VDPVVYNML EDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
Sbjct: 121 VDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180

Query: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE 240
           PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240

Query: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 300
           IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGK                      
Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGK---------------------- 300

Query: 301 LDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSA 360
                                                     GFNGAD+RN+CTEAGM A
Sbjct: 301 ------------------------------------------GFNGADLRNICTEAGMFA 335

Query: 361 IRAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKD 399
           IRAERDYVIHEDFMKAVRKL+EAKKLESSSHYNADFGK+
Sbjct: 361 IRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 335

[Close]

BLAST of Cp4.1LG11g02310.1 vs. TAIR 10
Match: AT5G19990.1 (regulatory particle triple-A ATPase 6A )

HSP 1 Score: 328.2 bits (840), Expect = 9.3e-90
Identity = 173/366 (47.27%), Postives = 239/366 (65.30%), Query Frame = 0


Query: 15  NDYRKKLLQHKELDARVGSLRENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERL 74
           N+  +   Q  EL++RV  LRE              +L+ LQ  G  +GEV++ +   ++
Sbjct: 52  NNLNRLEAQRNELNSRVRMLRE--------------ELQLLQEPGSYVGEVVKVMGKNKV 111

Query: 75  IVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLREDPGN 134
           +VK     +YVV     +D  K+T  TRV L   +  +   LP +VDP+V  M  E   +
Sbjct: 112 LVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPD 171

Query: 135 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 194
            +Y  +GGL  QI+E++E IELP+ +PELF  +GI  PKGVLLYGPPGTGKTLLARA+A 
Sbjct: 172 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 231

Query: 195 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT-S 254
           + D  F++V  S ++ KYIGE +R++RE+F  AR+H P IIFMDEID+IG  R   G+ +
Sbjct: 232 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGN 291

Query: 255 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 314
            D E+QRT++ELLNQLDGF+   K+K++MATNR D+LD ALLRPGR+DRKIE P PNE+S
Sbjct: 292 GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEES 351

Query: 315 RTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAIRAERDYVIHEDFM 374
           R +ILKIH+  +     ID + + +   G +GA+++ VCTEAGM A+R  R +V  EDF 
Sbjct: 352 RFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFE 403

Query: 375 KAVRKL 380
            AV K+
Sbjct: 412 MAVAKV 403

[Close]

BLAST of Cp4.1LG11g02310.1 vs. TAIR 10
Match: AT1G53750.1 (regulatory particle triple-A 1A )

HSP 1 Score: 327.4 bits (838), Expect = 1.6e-89
Identity = 155/310 (50.00%), Postives = 217/310 (70.00%), Query Frame = 0


Query: 70  DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLR 129
           ++ + ++      ++VVG   KV    +  G RV +D     I   LP ++DP V  M  
Sbjct: 100 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 159

Query: 130 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 189
           E+  +V+Y+ VGG  +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPGTGKTLLA
Sbjct: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219

Query: 190 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 249
           RA+A+  DA F++V+ S ++ KY+GE AR++RE+F  AR  + CI+F DE+DAIGG RF 
Sbjct: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279

Query: 250 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 309
           +G   D E+QRT++E++NQLDGFD  G +K++MATNRPD LDPALLRPGRLDRK+E  LP
Sbjct: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339

Query: 310 NEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADMRNVCTEAGMSAIRAERDYVIH 369
           + +SRT+I KIH   +    +I +E + +L     GAD+R+VCTEAGM AIRA R  V  
Sbjct: 340 DLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTE 399

Query: 370 EDFMKAVRKL 380
           +DF+ AV K+
Sbjct: 400 KDFLDAVNKV 409

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g02310.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MAK9	1.8e-210	93.48	26S proteasome regulatory subunit S10B homolog B OS=Arabidopsis thaliana OX=3702...	[more]
Q9SEI3	1.7e-208	92.73	26S proteasome regulatory subunit 10B homolog A OS=Arabidopsis thaliana OX=3702 ...	[more]
P62333	2.0e-169	77.84	26S proteasome regulatory subunit 10B OS=Homo sapiens OX=9606 GN=PSMC6 PE=1 SV=1	[more]
P62335	2.0e-169	77.84	26S proteasome regulatory subunit 10B OS=Ictidomys tridecemlineatus OX=43179 GN=...	[more]
P62334	2.0e-169	77.84	26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=...	[more]

BLAST of Cp4.1LG11g02310.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023545986.1	9.39e-281	100.00	26S proteasome regulatory subunit S10B homolog B-like [Cucurbita pepo subsp. pep...	[more]
XP_022961947.1	1.56e-279	99.75	26S proteasome regulatory subunit S10B homolog B [Cucurbita moschata]	[more]
XP_022996644.1	1.82e-278	99.50	26S proteasome regulatory subunit S10B homolog B [Cucurbita maxima]	[more]
KAG7029405.1	1.05e-277	98.99	26S protease regulatory subunit S10B-like B [Cucurbita argyrosperma subsp. argyr...	[more]
XP_022961948.1	4.98e-276	98.24	26S proteasome regulatory subunit S10B homolog B-like [Cucurbita moschata] >XP_0...	[more]

BLAST of Cp4.1LG11g02310.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HBG5	7.54e-280	99.75	26S proteasome regulatory subunit S10B homolog B OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1K9B1	8.79e-279	99.50	26S proteasome regulatory subunit S10B homolog B OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1K5D4	2.41e-276	98.24	26S proteasome regulatory subunit S10B homolog B-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1HDB8	2.41e-276	98.24	26S proteasome regulatory subunit S10B homolog B-like OS=Cucurbita moschata OX=3...	[more]
A0A0A0LNP0	1.40e-275	97.99	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362420 PE=3 SV...	[more]

BLAST of Cp4.1LG11g02310.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G45000.1	1.3e-211	93.48	AAA-type ATPase family protein	[more]
AT5G43010.1	1.2e-209	92.73	regulatory particle triple-A ATPase 4A	[more]
AT1G45000.2	2.5e-167	78.45	AAA-type ATPase family protein	[more]
AT5G19990.1	9.3e-90	47.27	regulatory particle triple-A ATPase 6A	[more]
AT1G53750.1	1.6e-89	50.00	regulatory particle triple-A 1A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 24..58
None	No IPR available	GENE3D	1.10.8.60		coord: 309..379 e-value: 5.5E-21 score: 76.3
None	No IPR available	GENE3D	2.40.50.140		coord: 23..127 e-value: 1.1E-30 score: 107.8
None	No IPR available	PANTHER	PTHR23073	26S PROTEASOME REGULATORY SUBUNIT	coord: 4..385
None	No IPR available	PANTHER	PTHR23073:SF104	SUBFAMILY NOT NAMED	coord: 4..385
None	No IPR available	CDD	cd00009	AAA	coord: 141..308 e-value: 1.46956E-26 score: 101.839
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 171..310 e-value: 2.6E-21 score: 86.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 128..308 e-value: 1.3E-66 score: 225.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 135..383
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 175..308 e-value: 4.2E-42 score: 143.7
IPR041569	AAA ATPase, AAA+ lid domain	PFAM	PF17862	AAA_lid_3	coord: 331..373 e-value: 8.5E-10 score: 38.3
IPR005937	26S proteasome regulatory subunit P45-like	TIGRFAM	TIGR01242	TIGR01242	coord: 23..379 e-value: 5.3E-135 score: 448.2
IPR032501	Proteasomal ATPase OB C-terminal domain	PFAM	PF16450	Prot_ATP_ID_OB	coord: 62..117 e-value: 2.9E-10 score: 40.0
IPR003960	ATPase, AAA-type, conserved site	PROSITE	PS00674	AAA	coord: 278..296

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG11g02310	Cp4.1LG11g02310	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g02310.1:exon:011	Cp4.1LG11g02310.1:exon:011	exon
Cp4.1LG11g02310.1:exon:010	Cp4.1LG11g02310.1:exon:010	exon
Cp4.1LG11g02310.1:exon:009	Cp4.1LG11g02310.1:exon:009	exon
Cp4.1LG11g02310.1:exon:008	Cp4.1LG11g02310.1:exon:008	exon
Cp4.1LG11g02310.1:exon:007	Cp4.1LG11g02310.1:exon:007	exon
Cp4.1LG11g02310.1:exon:006	Cp4.1LG11g02310.1:exon:006	exon
Cp4.1LG11g02310.1:exon:005	Cp4.1LG11g02310.1:exon:005	exon
Cp4.1LG11g02310.1:exon:004	Cp4.1LG11g02310.1:exon:004	exon
Cp4.1LG11g02310.1:exon:003	Cp4.1LG11g02310.1:exon:003	exon
Cp4.1LG11g02310.1:exon:002	Cp4.1LG11g02310.1:exon:002	exon
Cp4.1LG11g02310.1:exon:001	Cp4.1LG11g02310.1:exon:001	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g02310.1:three_prime_utr:001	Cp4.1LG11g02310.1:three_prime_utr:001	three_prime_UTR
Cp4.1LG11g02310.1:three_prime_utr:002	Cp4.1LG11g02310.1:three_prime_utr:002	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g02310.1:cds:001	Cp4.1LG11g02310.1:cds:001	CDS
Cp4.1LG11g02310.1:cds:002	Cp4.1LG11g02310.1:cds:002	CDS
Cp4.1LG11g02310.1:cds:003	Cp4.1LG11g02310.1:cds:003	CDS
Cp4.1LG11g02310.1:cds:004	Cp4.1LG11g02310.1:cds:004	CDS
Cp4.1LG11g02310.1:cds:005	Cp4.1LG11g02310.1:cds:005	CDS
Cp4.1LG11g02310.1:cds:006	Cp4.1LG11g02310.1:cds:006	CDS
Cp4.1LG11g02310.1:cds:007	Cp4.1LG11g02310.1:cds:007	CDS
Cp4.1LG11g02310.1:cds:008	Cp4.1LG11g02310.1:cds:008	CDS
Cp4.1LG11g02310.1:cds:009	Cp4.1LG11g02310.1:cds:009	CDS
Cp4.1LG11g02310.1:cds:010	Cp4.1LG11g02310.1:cds:010	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g02310.1:five_prime_utr:001	Cp4.1LG11g02310.1:five_prime_utr:001	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g02310.1	Cp4.1LG11g02310.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030163	protein catabolic process
biological_process	GO:1901800	positive regulation of proteasomal protein catabolic process
biological_process	GO:0045899	positive regulation of RNA polymerase II transcription preinitiation complex assembly
biological_process	GO:0030433	ubiquitin-dependent ERAD pathway
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0031597	cytosolic proteasome complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0008540	proteasome regulatory particle, base subcomplex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0036402	proteasome-activating activity
molecular_function	GO:0008233	peptidase activity