Cp4.1LG08g12170.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g12170.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Ubiquitinyl hydrolase 1
Location	Cp4.1LG08: 8818994 .. 8822084 (-)
Sequence length	1721
RNA-Seq Expression	Cp4.1LG08g12170.1
Synteny	Cp4.1LG08g12170.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGAGAGAATAACAAGCTTACACCAAAAGTAACACCCATAGCTTGCTTGGCTGAATCTAGGGTTTATTTCTCTCTTCTTCATCCTTTTTTTTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCCATTTTCTCTGTGTTGAGAATTATGGAGGGAGCCAGCAATGGAGGGATGTTGTATCACGAGGTACAAGAATCGAAGCTTTGCGCTGTGCATTGTGTCAACACTGTCTTGCAGGGTCCATTCTTCTCGGAATTCGATTTGGCTGCTCTCGCATCCGATCTCGACCGGAAGGAGCGCCAGATGATGCTTGGTGGATCCACAACCGGCGATTTCCTCTCCGAGGAGTCTCACAATGTCTCCTTGGATGGTGATTTCAGTATCCAGGTTTTGATTCCCCTGTTGCTCTATCTGTTATTGTTTGTTATTCTTTTCTCCTTCTAGAAGCTAATTCAGGGAAACCGAAACGCTGCTTTGGATGTCTTTTTTTTCTTCTTTTTTTTTTTTTTATATTTTTATTTGATCGATTTAGTGTAAATACGCAGGCTCCTCCGTGGATACTCTTTATATTACTTCTTCAATCTACTCGAATTCCAAATGTTGTTGAATATTTTGAATTGCATTCAGGAACAGTGGTTAACGAATATATTGGATGTTTTACGGAAAGCGGTTGAAATGCGATCCTGATGTTCGAGTTGTGTATTCTTTTAACAGTAGAAATAGAAAACCTGCCAGTATGCAGTAGTTACAGTCATTATGAGCCATTTGTGTAACGGTTACAGCTGATATTGTTTTGAATTTTAAAAAGAACTGATACAATGACTTGTAATGGCATGGGAATTCACACATACGTAATAGTACCAATGATGAAATATTTTTTAAGACAAGGTTTATTACTTGCAAAACCCCCTAAGCTACTATTCTCCTTTGTCCCAGTGTCATCTTTCTGAGGTAGCAGTGATGCAAAATTTGAATAACGTTGTGTTCAACGAACTTTGTGACAATACTTGCTTCTACTGTACGGATGTACCTGATAATATTATGACAAGTTTATTGTGATTCATTCAAGTGATATATGTTTCTTGATGTATGCTTTGCTTCAAATGTGATTATCTGAAAAATAGGATTACATTATCTCATAAGTTGTTTTTGGGATGAGAAACATGTTTTTAACTCATAAGTTGCTACGCTTCTGATCTCTTAATTCTTGAATTTAACATGAGTTGGCATATGGGATGGTTAGAGATCGTTAGAAAAACTTGTTATAGCAAGTAATCATTAATAAAGTAGATTGAAAGTGGGCAAGTAAGGACACTGCTCTTAATTTTTCTTCCCTGATCTTGCAATTTTTTCCTTATCTCAATATTAGTCCTTTGGCTCCCATTAACTACATCTGGGCAGGCACACTGCTTATGCATTTTGGTTTACCACATGCTTCTGAAATCATCTATTGTTCTGTAATCAGGTGTCGAAGCTGGCTTAGCTTAGGTTTTTTGGAGATTGACCTTGTTTTGGATACCCAAATTTAGCGCAGTGAACATCAGATCTCTTTCTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTATTTGGGTAAACTATTTAAGTAAAACAGTGAAATATTTAAGAGGGATGGGACTTCTTTTTTTCTAAACCAGTTCCTATTCTATGTGTATATTATCAATTCACAGAACCTGTTGGGATGTTCTGATTTGTTTAAATCATTATATATTTGCTTGCAGGTCTTACAAAAGGCTTTGGAGGTATGGGATCTTCAAGTTATTCCTCTCAACTCCCCAGTTGCTGAACCTGCACAGATTGATCCTGAACTGGAGAATGCATTTATATGTCACTTGCAAGATCATTGGTTTTGTATTAGGAAAGTGAACGGGGAGTGGTACAATTTTGATAGTCTATATGCAGCCCCACAACATCTTTCTAAGTTTTACCTTTCAGCCTACTTGGACTCTCTAAAGGGTTTTGGTTGGAGCATCTTTATAGTGAGGGGTAACTTCCCCAAGGATTTTCCCATATTGTCCACCGAAGCATCTAATGGTTATGGTCAGTGGCTTTCCCCCGAGGATGCTGAGAGGATAACCAAATCGTGCAACACTACCCAAAACCCCCCTCCTCCACAAAGAGTAAGCTGGACAGAGCAGCAAGATACCTTTCTTTCAACCGGAGAAGCTGAAATGCTTATGGACATGGAGGATGAAGACTTGAAGGCTGCAATAGCTGCTAGCCTCATGGATTCCTCAGCAGTCATGGCAGCAGGAGTTGGTAATCCCCAAAAAGAACCTGCAGCTTCCTCCACCCAAGCTGCCTCCCCCCATAATGTCCCTGCTGTTTCCCTTGAAGCTGCTGCCAATACTGATGTACCTGCAGTTTCCAACAAACCTGCCTCCCTCCAAAATGATGTAGCTGTTGTTTCCCCTGAAGCTTCCACCTCCCAGGATGTCCATGCTACCATCCAAGATTCTCATGCAGCTTCTGCCAAAGCTGCTTCTCCCAATAATGAACCTACAACCTCCCCTGAAGTTGCTATGCCTCAAAATGAATCTGAAAACAAATCTACAGGTAATGCAGACGCTGCCTTTCATGAAAGCGAACCTGCAGATAATGCAGACTGCACCATTTCTAGCCCTCGTAAGAAAATCAGTCGTACTGATGAGGGAACTCCCTGAGGAAGTAATTGATTTTTGGTTCAAGATTGATGAATGAACGGGATTGGCACAAGGCGAAAGAAGAGAATAATTTGCAGGAGAATGGGAACCCGAAATCCTTGTTGAACTCAAGGTTAGCTAGTTGAAGTTAAATCCATGCTTTACAGTCCTGTGCAGTGTAACTATTTCCACCTTACATTTTCAATTCAGATTGATACTGTATAACATTAAAAAAAAAAAATGCCGTCAGCTTGGCCTCTGGATTGTCACAAATGTTCGATTACAGAGATGTATTTGTCGTCGAAAATATTTTAAGGATCTCAAAGTACAATAACCCCATTATCACGTTAAAATCAATCACGTTATTCGAGTTCGAGTTGGTTGGGTT

mRNA sequence

CGAGAGAGAATAACAAGCTTACACCAAAAGTAACACCCATAGCTTGCTTGGCTGAATCTAGGGTTTATTTCTCTCTTCTTCATCCTTTTTTTTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCCATTTTCTCTGTGTTGAGAATTATGGAGGGAGCCAGCAATGGAGGGATGTTGTATCACGAGGTACAAGAATCGAAGCTTTGCGCTGTGCATTGTGTCAACACTGTCTTGCAGGGTCCATTCTTCTCGGAATTCGATTTGGCTGCTCTCGCATCCGATCTCGACCGGAAGGAGCGCCAGATGATGCTTGGTGGATCCACAACCGGCGATTTCCTCTCCGAGGAGTCTCACAATGTCTCCTTGGATGGTGATTTCAGTATCCAGGTCTTACAAAAGGCTTTGGAGGTATGGGATCTTCAAGTTATTCCTCTCAACTCCCCAGTTGCTGAACCTGCACAGATTGATCCTGAACTGGAGAATGCATTTATATGTCACTTGCAAGATCATTGGTTTTGTATTAGGAAAGTGAACGGGGAGTGGTACAATTTTGATAGTCTATATGCAGCCCCACAACATCTTTCTAAGTTTTACCTTTCAGCCTACTTGGACTCTCTAAAGGGTTTTGGTTGGAGCATCTTTATAGTGAGGGGTAACTTCCCCAAGGATTTTCCCATATTGTCCACCGAAGCATCTAATGGTTATGGTCAGTGGCTTTCCCCCGAGGATGCTGAGAGGATAACCAAATCGTGCAACACTACCCAAAACCCCCCTCCTCCACAAAGAGTAAGCTGGACAGAGCAGCAAGATACCTTTCTTTCAACCGGAGAAGCTGAAATGCTTATGGACATGGAGGATGAAGACTTGAAGGCTGCAATAGCTGCTAGCCTCATGGATTCCTCAGCAGTCATGGCAGCAGGAGTTGGTAATCCCCAAAAAGAACCTGCAGCTTCCTCCACCCAAGCTGCCTCCCCCCATAATGTCCCTGCTGTTTCCCTTGAAGCTGCTGCCAATACTGATGTACCTGCAGTTTCCAACAAACCTGCCTCCCTCCAAAATGATGTAGCTGTTGTTTCCCCTGAAGCTTCCACCTCCCAGGATGTCCATGCTACCATCCAAGATTCTCATGCAGCTTCTGCCAAAGCTGCTTCTCCCAATAATGAACCTACAACCTCCCCTGAAGTTGCTATGCCTCAAAATGAATCTGAAAACAAATCTACAGGTAATGCAGACGCTGCCTTTCATGAAAGCGAACCTGCAGATAATGCAGACTGCACCATTTCTAGCCCTCGTAAGAAAATCAGTCGTACTGATGAGGGAACTCCCTGAGGAAGTAATTGATTTTTGGTTCAAGATTGATGAATGAACGGGATTGGCACAAGGCGAAAGAAGAGAATAATTTGCAGGAGAATGGGAACCCGAAATCCTTGTTGAACTCAAGGTTAGCTAGTTGAAGTTAAATCCATGCTTTACAGTCCTGTGCAGTGTAACTATTTCCACCTTACATTTTCAATTCAGATTGATACTGTATAACATTAAAAAAAAAAAATGCCGTCAGCTTGGCCTCTGGATTGTCACAAATGTTCGATTACAGAGATGTATTTGTCGTCGAAAATATTTTAAGGATCTCAAAGTACAATAACCCCATTATCACGTTAAAATCAATCACGTTATTCGAGTTCGAGTTGGTTGGGTT

Coding sequence (CDS)

ATGGAGGGAGCCAGCAATGGAGGGATGTTGTATCACGAGGTACAAGAATCGAAGCTTTGCGCTGTGCATTGTGTCAACACTGTCTTGCAGGGTCCATTCTTCTCGGAATTCGATTTGGCTGCTCTCGCATCCGATCTCGACCGGAAGGAGCGCCAGATGATGCTTGGTGGATCCACAACCGGCGATTTCCTCTCCGAGGAGTCTCACAATGTCTCCTTGGATGGTGATTTCAGTATCCAGGTCTTACAAAAGGCTTTGGAGGTATGGGATCTTCAAGTTATTCCTCTCAACTCCCCAGTTGCTGAACCTGCACAGATTGATCCTGAACTGGAGAATGCATTTATATGTCACTTGCAAGATCATTGGTTTTGTATTAGGAAAGTGAACGGGGAGTGGTACAATTTTGATAGTCTATATGCAGCCCCACAACATCTTTCTAAGTTTTACCTTTCAGCCTACTTGGACTCTCTAAAGGGTTTTGGTTGGAGCATCTTTATAGTGAGGGGTAACTTCCCCAAGGATTTTCCCATATTGTCCACCGAAGCATCTAATGGTTATGGTCAGTGGCTTTCCCCCGAGGATGCTGAGAGGATAACCAAATCGTGCAACACTACCCAAAACCCCCCTCCTCCACAAAGAGTAAGCTGGACAGAGCAGCAAGATACCTTTCTTTCAACCGGAGAAGCTGAAATGCTTATGGACATGGAGGATGAAGACTTGAAGGCTGCAATAGCTGCTAGCCTCATGGATTCCTCAGCAGTCATGGCAGCAGGAGTTGGTAATCCCCAAAAAGAACCTGCAGCTTCCTCCACCCAAGCTGCCTCCCCCCATAATGTCCCTGCTGTTTCCCTTGAAGCTGCTGCCAATACTGATGTACCTGCAGTTTCCAACAAACCTGCCTCCCTCCAAAATGATGTAGCTGTTGTTTCCCCTGAAGCTTCCACCTCCCAGGATGTCCATGCTACCATCCAAGATTCTCATGCAGCTTCTGCCAAAGCTGCTTCTCCCAATAATGAACCTACAACCTCCCCTGAAGTTGCTATGCCTCAAAATGAATCTGAAAACAAATCTACAGGTAATGCAGACGCTGCCTTTCATGAAAGCGAACCTGCAGATAATGCAGACTGCACCATTTCTAGCCCTCGTAAGAAAATCAGTCGTACTGATGAGGGAACTCCCTGA

Protein sequence

MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTTGDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILSTEASNGYGQWLSPEDAERITKSCNTTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDLKAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAASPHNVPAVSLEAAANTDVPAVSNKPASLQNDVAVVSPEASTSQDVHATIQDSHAASAKAASPNNEPTTSPEVAMPQNESENKSTGNADAAFHESEPADNADCTISSPRKKISRTDEGTP

Homology

[Close]

BLAST of Cp4.1LG08g12170.1 vs. ExPASy Swiss-Prot
Match: Q9M391 (Ataxin-3 homolog OS=Arabidopsis thaliana OX=3702 GN=At3g54130 PE=1 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 1.1e-103
Identity = 198/276 (71.74%), Postives = 224/276 (81.16%), Query Frame = 0


Query: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMML----- 60
           ME  SNGGMLYHEVQES LCAVHCVNTVLQGPFFSEFDLAA+A+DLD KERQ+ML     
Sbjct: 1   MERTSNGGMLYHEVQESNLCAVHCVNTVLQGPFFSEFDLAAVAADLDGKERQVMLEGAAV 60

Query: 61  GGSTTGDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFI 120
           GG   GDFL+EESHNVSL GDFSIQVLQKALEVWDLQVIPLN P AEPAQIDPELE+AFI
Sbjct: 61  GGFAPGDFLAEESHNVSLGGDFSIQVLQKALEVWDLQVIPLNCPDAEPAQIDPELESAFI 120

Query: 121 CHLQDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDF 180
           CHL DHWFCIRKVNGEWYNFDSL AAPQHLSKFYLSA+LDSLKG GWSIFIV+GNFP++ 
Sbjct: 121 CHLHDHWFCIRKVNGEWYNFDSLLAAPQHLSKFYLSAFLDSLKGAGWSIFIVKGNFPQEC 180

Query: 181 PI-LSTEASNGYGQWLSPEDAERI---TKSCNTTQNPPPPQRVSWTEQQDTFLSTGEAEM 240
           P+  S+EASN +GQWLSPEDAERI   T S ++ +N      V+  ++++  LS  E + 
Sbjct: 181 PMSSSSEASNSFGQWLSPEDAERIRKNTSSGSSARNKRSNDNVN-QQRRNQALSREEVQA 240

Query: 241 LMDMEDEDLKAAIAASLMDSSAVMA--AGVGNPQKE 266
             +MED+DLKAAIAASL+D+SA  A    VG  +KE
Sbjct: 241 FSEMEDDDLKAAIAASLLDASAAEANLGAVGTSEKE 275

[Close]

BLAST of Cp4.1LG08g12170.1 vs. ExPASy Swiss-Prot
Match: Q8LQ36 (Putative ataxin-3 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0851400 PE=3 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 7.9e-94
Identity = 179/262 (68.32%), Postives = 204/262 (77.86%), Query Frame = 0


Query: 4   ASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMM----LGGST 63
           ASNGG+LYHEVQE KLCAVHCVNT LQGPFFSEFDL+ALA DLD++ERQ+M     G +T
Sbjct: 7   ASNGGLLYHEVQEGKLCAVHCVNTTLQGPFFSEFDLSALAVDLDQRERQVMSEGAAGAAT 66

Query: 64  T--GDFLS--EESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFI 123
           T  GDFL+  E SHNVSL GDFSIQVLQKALEVWDLQVIPL+SP       DPELE AFI
Sbjct: 67  TAAGDFLAEGEGSHNVSLGGDFSIQVLQKALEVWDLQVIPLDSPDVGSCLFDPELETAFI 126

Query: 124 CHLQDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDF 183
           CHLQDHWFCIRKVNGEWYNF+SLY AP+HLSKFYLSA++D+LKG GWSIF VRGNFPK+ 
Sbjct: 127 CHLQDHWFCIRKVNGEWYNFNSLYPAPEHLSKFYLSAFIDTLKGSGWSIFAVRGNFPKEC 186

Query: 184 PILSTEASNGYGQWLSPEDAERITKSCNTTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDM 243
           P ++TE SNG+GQWL+P+DA RIT SCN  Q P     VS    Q   +S  E +M+   
Sbjct: 187 P-MATEGSNGFGQWLTPDDARRITSSCNQVQTPTQQAGVSLVADQSEEMS--EMDMIAAQ 246

Query: 244 EDE-DLKAAIAASLMDSSAVMA 257
           ++E DL AAIAASLMD+    A
Sbjct: 247 QEEADLNAAIAASLMDTGGPFA 265

[Close]

BLAST of Cp4.1LG08g12170.1 vs. ExPASy Swiss-Prot
Match: P54252 (Ataxin-3 OS=Homo sapiens OX=9606 GN=ATXN3 PE=1 SV=5)

HSP 1 Score: 158.3 bits (399), Expect = 1.8e-37
Identity = 87/245 (35.51%), Postives = 139/245 (56.73%), Query Frame = 0


Query: 10  LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTTGD----FLS 69
           ++HE QE  LCA HC+N +LQG +FS  +L+++A  LD +ER  M  G  T +    FL 
Sbjct: 4   IFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERMRMAEGGVTSEDYRTFLQ 63

Query: 70  EESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQDHWFCI 129
           + S N+   G FSIQV+  AL+VW L++I  NSP  +  +IDP  E +FIC+ ++HWF +
Sbjct: 64  QPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTV 123

Query: 130 RKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFP---KDFPILSTEA 189
           RK+  +W+N +SL   P+ +S  YL+ +L  L+  G+SIF+V+G+ P    D  +     
Sbjct: 124 RKLGKQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLPDCEADQLLQMIRV 183

Query: 190 SNGYGQWLSPEDAERITKSCNTTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDLKA 248
              +   L  E+  ++ +           QRV  T+  +  L   +   ++D ++EDL+ 
Sbjct: 184 QQMHRPKLIGEELAQLKE-----------QRVHKTD-LERVLEANDGSGMLDEDEEDLQR 236

[Close]

BLAST of Cp4.1LG08g12170.1 vs. ExPASy Swiss-Prot
Match: O35815 (Ataxin-3 OS=Rattus norvegicus OX=10116 GN=Atxn3 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.7e-36
Identity = 95/286 (33.22%), Postives = 149/286 (52.10%), Query Frame = 0


Query: 10  LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTTGD----FLS 69
           ++HE QE  LCA HC+N +LQG +FS  +L+++A  LD +ER  M  G  T +    FL 
Sbjct: 4   IFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERLRMAEGGVTSEDYRTFLQ 63

Query: 70  EESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQDHWFCI 129
           + S N+   G FSIQV+  AL+VW L++I  NSP  +  +IDP  E +FIC+ ++HWF +
Sbjct: 64  QPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTV 123

Query: 130 RKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFP------------- 189
           RK+  +W+N +SL   P+ +S  YL+ +L  L+  G+SIF+V+G+ P             
Sbjct: 124 RKLGKQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLPDCEADQLLQMIKV 183

Query: 190 ---KDFPILSTEASNGYGQWLSPEDAERITKSCNTTQNPPPPQRVSWTEQQDTFLSTGEA 249
                  ++  E ++   Q     D ER+ ++ +      P       +     L+    
Sbjct: 184 QQMHRPKLIGEELAHLKEQSALKADLERVLEAAD-----GPGMFDDDEDDLQRALAMSRQ 243

Query: 250 EMLMDMEDEDLKAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAAS 276
           E+ M+ E+ DL+ AI  S+  SS  M       +  P  SST  +S
Sbjct: 244 EIDMEDEEADLRRAIQLSMQGSSRGMC------EDSPQTSSTDLSS 278

[Close]

BLAST of Cp4.1LG08g12170.1 vs. ExPASy Swiss-Prot
Match: Q9CVD2 (Ataxin-3 OS=Mus musculus OX=10090 GN=Atxn3 PE=1 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 7.5e-36
Identity = 95/289 (32.87%), Postives = 151/289 (52.25%), Query Frame = 0


Query: 10  LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTTGD----FLS 69
           ++HE QE  LCA HC+N +LQG +FS  +L+++A  LD +ER  M  G  T +    FL 
Sbjct: 4   IFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERLRMAEGGVTSEDYRTFLQ 63

Query: 70  EESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQDHWFCI 129
           + S N+   G FSIQV+  AL+VW L++I  NSP  +  +IDP  E +FIC+ ++HWF +
Sbjct: 64  QPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTV 123

Query: 130 RKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFP------------- 189
           RK+  +W+N +SL   P+ +S  YL+ +L  L+  G+SIF+V+G+ P             
Sbjct: 124 RKLGKQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLPDCEADQLLQMIKV 183

Query: 190 ---KDFPILSTEASNGYGQWLSPEDAERITKSCNTTQNPPPPQRVSWTEQQDTF---LST 249
                  ++  E ++   Q     D ER+ ++ + +          + E +D     L+ 
Sbjct: 184 QQMHRPKLIGEELAHLKEQSALKADLERVLEAADGSG--------IFDEDEDDLQRALAI 243

Query: 250 GEAEMLMDMEDEDLKAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAAS 276
              E+ M+ E+ DL+ AI  S+  SS  M       +  P  SS   +S
Sbjct: 244 SRQEIDMEDEEADLRRAIQLSMQGSSRSMC------ENSPQTSSPDLSS 278

[Close]

BLAST of Cp4.1LG08g12170.1 vs. NCBI nr
Match: XP_023539355.1 (ataxin-3 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 765 bits (1975), Expect = 1.75e-278
Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 0


Query: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT 60
           MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT
Sbjct: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT 60

Query: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD 120
           GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD
Sbjct: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD 120

Query: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST 180
           HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST
Sbjct: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST 180

Query: 181 EASNGYGQWLSPEDAERITKSCNTTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL 240
           EASNGYGQWLSPEDAERITKSCNTTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL
Sbjct: 181 EASNGYGQWLSPEDAERITKSCNTTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL 240

Query: 241 KAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAASPHNVPAVSLEAAANTDVPAVSNKPA 300
           KAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAASPHNVPAVSLEAAANTDVPAVSNKPA
Sbjct: 241 KAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAASPHNVPAVSLEAAANTDVPAVSNKPA 300

Query: 301 SLQNDVAVVSPEASTSQDVHATIQDSHAASAKAASPNNEPTTSPEVAMPQNESENKSTGN 360
           SLQNDVAVVSPEASTSQDVHATIQDSHAASAKAASPNNEPTTSPEVAMPQNESENKSTGN
Sbjct: 301 SLQNDVAVVSPEASTSQDVHATIQDSHAASAKAASPNNEPTTSPEVAMPQNESENKSTGN 360

Query: 361 ADAAFHESEPADNADCTISSPRKKISRTDEGTP 393
           ADAAFHESEPADNADCTISSPRKKISRTDEGTP
Sbjct: 361 ADAAFHESEPADNADCTISSPRKKISRTDEGTP 393

[Close]

BLAST of Cp4.1LG08g12170.1 vs. NCBI nr
Match: KAG6596364.1 (Ataxin-3-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027914.1 Ataxin-3-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 749 bits (1934), Expect = 3.22e-272
Identity = 387/394 (98.22%), Postives = 389/394 (98.73%), Query Frame = 0


Query: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT 60
           MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT
Sbjct: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT 60

Query: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD 120
           GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD
Sbjct: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD 120

Query: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST 180
           HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST
Sbjct: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST 180

Query: 181 EASNGYGQWLSPEDAERITKSCNTTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL 240
           EASNGYGQWLSPEDAERITKSCN+TQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL
Sbjct: 181 EASNGYGQWLSPEDAERITKSCNSTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL 240

Query: 241 KAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAASPHNVPAVSLEAAANTDVPAVSNKPA 300
           KAAIAASLMDSSAVMA GVGNPQKEPAASSTQAASPHNVP VSLEAAANTDVPAVSNKPA
Sbjct: 241 KAAIAASLMDSSAVMAEGVGNPQKEPAASSTQAASPHNVPVVSLEAAANTDVPAVSNKPA 300

Query: 301 SLQNDVAVV-SPEASTSQDVHATIQDSHAASAKAASPNNEPTTSPEVAMPQNESENKSTG 360
           SLQNDVAVV SPEASTSQDVHATIQD+HA SAKAASPNNEPTTSPEVAM QNESENKSTG
Sbjct: 301 SLQNDVAVVVSPEASTSQDVHATIQDAHAVSAKAASPNNEPTTSPEVAMHQNESENKSTG 360

Query: 361 NADAAFHESEPADNADCTISSPRKKISRTDEGTP 393
           NADAAFHESEPADNADCTISSPRKKISRTDEGTP
Sbjct: 361 NADAAFHESEPADNADCTISSPRKKISRTDEGTP 394

[Close]

BLAST of Cp4.1LG08g12170.1 vs. NCBI nr
Match: XP_022971387.1 (ataxin-3 homolog [Cucurbita maxima])

HSP 1 Score: 744 bits (1920), Expect = 4.21e-270
Identity = 382/393 (97.20%), Postives = 387/393 (98.47%), Query Frame = 0


Query: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT 60
           MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT
Sbjct: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT 60

Query: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD 120
           GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD
Sbjct: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD 120

Query: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST 180
           HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST
Sbjct: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST 180

Query: 181 EASNGYGQWLSPEDAERITKSCNTTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL 240
           EASNGYGQWLSPEDAERITKSCN+TQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL
Sbjct: 181 EASNGYGQWLSPEDAERITKSCNSTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL 240

Query: 241 KAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAASPHNVPAVSLEAAANTDVPAVSNKPA 300
           KAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAASP NVP VSLEAAANTDVPAV+NKPA
Sbjct: 241 KAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAASPDNVPVVSLEAAANTDVPAVANKPA 300

Query: 301 SLQNDVAVVSPEASTSQDVHATIQDSHAASAKAASPNNEPTTSPEVAMPQNESENKSTGN 360
           SLQNDVAVVSPEASTSQ+VHAT+QD+HA SAKAASPNNEPT SPEVAM QNESENKST N
Sbjct: 301 SLQNDVAVVSPEASTSQNVHATVQDAHAVSAKAASPNNEPTISPEVAMHQNESENKSTDN 360

Query: 361 ADAAFHESEPADNADCTISSPRKKISRTDEGTP 393
           ADAAFHESEPADNADCTISSPRKKISRTDEGTP
Sbjct: 361 ADAAFHESEPADNADCTISSPRKKISRTDEGTP 393

[Close]

BLAST of Cp4.1LG08g12170.1 vs. NCBI nr
Match: XP_022941313.1 (ataxin-3 homolog [Cucurbita moschata])

HSP 1 Score: 737 bits (1903), Expect = 1.41e-267
Identity = 383/394 (97.21%), Postives = 385/394 (97.72%), Query Frame = 0


Query: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT 60
           MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT
Sbjct: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT 60

Query: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD 120
           GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD
Sbjct: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD 120

Query: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST 180
           HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST
Sbjct: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST 180

Query: 181 EASNGYGQWLSPEDAERITKSCNTTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL 240
           EASNGYGQWLSPEDAERITKSCN+TQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL
Sbjct: 181 EASNGYGQWLSPEDAERITKSCNSTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL 240

Query: 241 KAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAASPHNVPAVSLEAAANTDVPAVSNKPA 300
           KAAIAASLMDSSAVMAAGVGNPQKEPAASST     HNVP VSLEAAANTDVPAVSNKPA
Sbjct: 241 KAAIAASLMDSSAVMAAGVGNPQKEPAASST-----HNVPVVSLEAAANTDVPAVSNKPA 300

Query: 301 SLQNDVAVV-SPEASTSQDVHATIQDSHAASAKAASPNNEPTTSPEVAMPQNESENKSTG 360
           SLQNDVAVV SPEASTSQDVHATIQD+HA SAKAASPNNEPTTSPEVAM QNESENKSTG
Sbjct: 301 SLQNDVAVVVSPEASTSQDVHATIQDAHAVSAKAASPNNEPTTSPEVAMHQNESENKSTG 360

Query: 361 NADAAFHESEPADNADCTISSPRKKISRTDEGTP 393
           NADAAFHESEPADNADCTISSPRKKISRTDEGTP
Sbjct: 361 NADAAFHESEPADNADCTISSPRKKISRTDEGTP 389

[Close]

BLAST of Cp4.1LG08g12170.1 vs. NCBI nr
Match: XP_038904645.1 (ataxin-3 homolog [Benincasa hispida])

HSP 1 Score: 625 bits (1613), Expect = 8.26e-223
Identity = 338/426 (79.34%), Postives = 355/426 (83.33%), Query Frame = 0


Query: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT 60
           M+GA NGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMML GSTT
Sbjct: 1   MDGACNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLSGSTT 60

Query: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD 120
           GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD
Sbjct: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD 120

Query: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST 180
           HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPI S+
Sbjct: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPISSS 180

Query: 181 EASNGYGQWLSPEDAERITKSCNTTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL 240
           EASNGYGQWLSPEDAERITKSCN+TQ PPPPQRV+WTEQ DTFLS+GE EML+DMEDEDL
Sbjct: 181 EASNGYGQWLSPEDAERITKSCNSTQAPPPPQRVNWTEQHDTFLSSGETEMLIDMEDEDL 240

Query: 241 KAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAASPHNVPAVSLE--------------- 300
           KAAIAASL+DSSAVMAAG  N Q EPA SSTQAASP NVP VSLE               
Sbjct: 241 KAAIAASLLDSSAVMAAGAANSQNEPAVSSTQAASPQNVPVVSLETAKTEDAPIVSLKAS 300

Query: 301 -----------AAANTDVPAVSNKPASLQNDVAVVSPEASTSQDVH-------ATIQDSH 360
                      AA   DVP VSNKP+S QN V  VSP+ASTSQDV        AT QD H
Sbjct: 301 TLQDVPAVFPKAATLQDVPVVSNKPSSPQN-VPFVSPKASTSQDVRPLSPDATATPQDLH 360

Query: 361 AASA-KAASPNNEPTTSPEVAMPQNESENKSTGNADAAFHESEPADNADCTISSPRKKIS 392
           A S  K A+PNN+P    EV++ QNES N+S GNA+AAF ES PADNA+C +SSPRKKIS
Sbjct: 361 AVSTTKTATPNNKPAVCTEVSVHQNESGNESVGNAEAAFRESGPADNAECGVSSPRKKIS 420

[Close]

BLAST of Cp4.1LG08g12170.1 vs. ExPASy TrEMBL
Match: A0A6J1I1T6 (Ubiquitinyl hydrolase 1 OS=Cucurbita maxima OX=3661 GN=LOC111470125 PE=4 SV=1)

HSP 1 Score: 744 bits (1920), Expect = 2.04e-270
Identity = 382/393 (97.20%), Postives = 387/393 (98.47%), Query Frame = 0


Query: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT 60
           MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT
Sbjct: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT 60

Query: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD 120
           GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD
Sbjct: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD 120

Query: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST 180
           HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST
Sbjct: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST 180

Query: 181 EASNGYGQWLSPEDAERITKSCNTTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL 240
           EASNGYGQWLSPEDAERITKSCN+TQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL
Sbjct: 181 EASNGYGQWLSPEDAERITKSCNSTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL 240

Query: 241 KAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAASPHNVPAVSLEAAANTDVPAVSNKPA 300
           KAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAASP NVP VSLEAAANTDVPAV+NKPA
Sbjct: 241 KAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAASPDNVPVVSLEAAANTDVPAVANKPA 300

Query: 301 SLQNDVAVVSPEASTSQDVHATIQDSHAASAKAASPNNEPTTSPEVAMPQNESENKSTGN 360
           SLQNDVAVVSPEASTSQ+VHAT+QD+HA SAKAASPNNEPT SPEVAM QNESENKST N
Sbjct: 301 SLQNDVAVVSPEASTSQNVHATVQDAHAVSAKAASPNNEPTISPEVAMHQNESENKSTDN 360

Query: 361 ADAAFHESEPADNADCTISSPRKKISRTDEGTP 393
           ADAAFHESEPADNADCTISSPRKKISRTDEGTP
Sbjct: 361 ADAAFHESEPADNADCTISSPRKKISRTDEGTP 393

[Close]

BLAST of Cp4.1LG08g12170.1 vs. ExPASy TrEMBL
Match: A0A6J1FRR9 (Ubiquitinyl hydrolase 1 OS=Cucurbita moschata OX=3662 GN=LOC111446649 PE=4 SV=1)

HSP 1 Score: 737 bits (1903), Expect = 6.84e-268
Identity = 383/394 (97.21%), Postives = 385/394 (97.72%), Query Frame = 0


Query: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT 60
           MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT
Sbjct: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT 60

Query: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD 120
           GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD
Sbjct: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD 120

Query: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST 180
           HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST
Sbjct: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST 180

Query: 181 EASNGYGQWLSPEDAERITKSCNTTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL 240
           EASNGYGQWLSPEDAERITKSCN+TQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL
Sbjct: 181 EASNGYGQWLSPEDAERITKSCNSTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL 240

Query: 241 KAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAASPHNVPAVSLEAAANTDVPAVSNKPA 300
           KAAIAASLMDSSAVMAAGVGNPQKEPAASST     HNVP VSLEAAANTDVPAVSNKPA
Sbjct: 241 KAAIAASLMDSSAVMAAGVGNPQKEPAASST-----HNVPVVSLEAAANTDVPAVSNKPA 300

Query: 301 SLQNDVAVV-SPEASTSQDVHATIQDSHAASAKAASPNNEPTTSPEVAMPQNESENKSTG 360
           SLQNDVAVV SPEASTSQDVHATIQD+HA SAKAASPNNEPTTSPEVAM QNESENKSTG
Sbjct: 301 SLQNDVAVVVSPEASTSQDVHATIQDAHAVSAKAASPNNEPTTSPEVAMHQNESENKSTG 360

Query: 361 NADAAFHESEPADNADCTISSPRKKISRTDEGTP 393
           NADAAFHESEPADNADCTISSPRKKISRTDEGTP
Sbjct: 361 NADAAFHESEPADNADCTISSPRKKISRTDEGTP 389

[Close]

BLAST of Cp4.1LG08g12170.1 vs. ExPASy TrEMBL
Match: A0A5D3DN96 (Ubiquitinyl hydrolase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001100 PE=4 SV=1)

HSP 1 Score: 607 bits (1564), Expect = 1.15e-215
Identity = 332/425 (78.12%), Postives = 350/425 (82.35%), Query Frame = 0


Query: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT 60
           M+GA NGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMML GSTT
Sbjct: 1   MDGACNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLSGSTT 60

Query: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD 120
           GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDP+LENAFICHLQD
Sbjct: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPQLENAFICHLQD 120

Query: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST 180
           HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPI S+
Sbjct: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPISSS 180

Query: 181 EASNGYGQWLSPEDAERITKSCNTTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL 240
           EASNGYGQWLSPEDAERITKSCN+TQ PPPPQR +WTEQQDTFLS+GE EML+DMEDEDL
Sbjct: 181 EASNGYGQWLSPEDAERITKSCNSTQAPPPPQRANWTEQQDTFLSSGETEMLIDMEDEDL 240

Query: 241 KAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAASPHNVPAVSLEAAANT---------- 300
           KAAIAASL+DSSAVMAAGV NP  EP  SSTQA SP NVPAVSLE A NT          
Sbjct: 241 KAAIAASLLDSSAVMAAGVANPPNEPVVSSTQAGSPQNVPAVSLETA-NTQDVLAVSPNA 300

Query: 301 ----DVPAVSNKPASLQNDVAV------------VSPEASTSQDVHA-------TIQDSH 360
               DV AVS K A+LQ+  A+            VSPEASTSQDV A         QD H
Sbjct: 301 SILQDVTAVSTKAATLQDVPAISAKAACPQNVPNVSPEASTSQDVRALPPDAADAPQDLH 360

Query: 361 AASA-KAASPNNEPTTSPEVAMPQNESENKSTGNADAAFHESEPADNADCTISSPRKKIS 391
           A S  KAA+PN++     EV + QNES N+S GNAD AF ES  ADN +C ISSPRKKIS
Sbjct: 361 AVSTTKAATPNDKSAVCTEVVVHQNESGNESVGNADTAFCESGSADNTECAISSPRKKIS 420

[Close]

BLAST of Cp4.1LG08g12170.1 vs. ExPASy TrEMBL
Match: A0A1S3B6I4 (Ubiquitinyl hydrolase 1 OS=Cucumis melo OX=3656 GN=LOC103486329 PE=4 SV=1)

HSP 1 Score: 607 bits (1564), Expect = 1.15e-215
Identity = 332/425 (78.12%), Postives = 350/425 (82.35%), Query Frame = 0


Query: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT 60
           M+GA NGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMML GSTT
Sbjct: 1   MDGACNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLSGSTT 60

Query: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD 120
           GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDP+LENAFICHLQD
Sbjct: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPQLENAFICHLQD 120

Query: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST 180
           HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPI S+
Sbjct: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPISSS 180

Query: 181 EASNGYGQWLSPEDAERITKSCNTTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL 240
           EASNGYGQWLSPEDAERITKSCN+TQ PPPPQR +WTEQQDTFLS+GE EML+DMEDEDL
Sbjct: 181 EASNGYGQWLSPEDAERITKSCNSTQAPPPPQRANWTEQQDTFLSSGETEMLIDMEDEDL 240

Query: 241 KAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAASPHNVPAVSLEAAANT---------- 300
           KAAIAASL+DSSAVMAAGV NP  EP  SSTQA SP NVPAVSLE A NT          
Sbjct: 241 KAAIAASLLDSSAVMAAGVANPPNEPVVSSTQAGSPQNVPAVSLETA-NTQDVLAVSPNA 300

Query: 301 ----DVPAVSNKPASLQNDVAV------------VSPEASTSQDVHA-------TIQDSH 360
               DV AVS K A+LQ+  A+            VSPEASTSQDV A         QD H
Sbjct: 301 SILQDVTAVSTKAATLQDVPAISAKAACPQNVPNVSPEASTSQDVRALPPDAADAPQDLH 360

Query: 361 AASA-KAASPNNEPTTSPEVAMPQNESENKSTGNADAAFHESEPADNADCTISSPRKKIS 391
           A S  KAA+PN++     EV + QNES N+S GNAD AF ES  ADN +C ISSPRKKIS
Sbjct: 361 AVSTTKAATPNDKSAVCTEVVVHQNESGNESVGNADTAFCESGSADNTECAISSPRKKIS 420

[Close]

BLAST of Cp4.1LG08g12170.1 vs. ExPASy TrEMBL
Match: A0A0A0L9Z8 (Ubiquitinyl hydrolase 1 OS=Cucumis sativus OX=3659 GN=Csa_3G732570 PE=4 SV=1)

HSP 1 Score: 604 bits (1557), Expect = 1.33e-214
Identity = 332/426 (77.93%), Postives = 352/426 (82.63%), Query Frame = 0


Query: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLGGSTT 60
           M+GA NGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMML GSTT
Sbjct: 1   MDGACNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLSGSTT 60

Query: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFICHLQD 120
           GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDP+LENAFICHLQD
Sbjct: 61  GDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPQLENAFICHLQD 120

Query: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPILST 180
           HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPI S+
Sbjct: 121 HWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPISSS 180

Query: 181 EASNGYGQWLSPEDAERITKSCNTTQNPPPPQRVSWTEQQDTFLSTGEAEMLMDMEDEDL 240
           EASNGYGQWLSPEDAERITKSCN+TQ PPPPQR +WTEQQDTFLS+GE EML+DMEDEDL
Sbjct: 181 EASNGYGQWLSPEDAERITKSCNSTQAPPPPQRANWTEQQDTFLSSGETEMLIDMEDEDL 240

Query: 241 KAAIAASLMDSSAVMAAGVGNPQKEPAASSTQAASPHNVPAVSLEAAANT---------- 300
           KAAIAASLMDSSAVMAAGV NP  EP  SSTQA SP NVPAV+LE A NT          
Sbjct: 241 KAAIAASLMDSSAVMAAGVANPPNEPVVSSTQAGSPQNVPAVALETA-NTQDVLAVSPNA 300

Query: 301 ----DVPAVSNKPASLQNDVAV------------VSPEASTSQDV------HATI-QDSH 360
               DVPAVS + A+LQ+  A+            VSPEASTSQDV       A I QD H
Sbjct: 301 SILEDVPAVSPEAATLQDVPAISAKAASPQNAPNVSPEASTSQDVCELSPNAADIPQDLH 360

Query: 361 AAS-AKAASPNNEPTTSPEVAMPQNESENKSTGNADAAFHESEPADNADCTISSPRKKIS 392
             S AKAA P N+     EV++ QNES N+S GNAD AF +S  ADN +C +SSPRKKIS
Sbjct: 361 TVSTAKAAIPKNKSAVCTEVSVHQNESGNESVGNADTAFCDSGSADNTECAVSSPRKKIS 420

[Close]

BLAST of Cp4.1LG08g12170.1 vs. TAIR 10
Match: AT3G54130.1 (Josephin family protein )

HSP 1 Score: 378.3 bits (970), Expect = 7.8e-105
Identity = 198/276 (71.74%), Postives = 224/276 (81.16%), Query Frame = 0


Query: 1   MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMML----- 60
           ME  SNGGMLYHEVQES LCAVHCVNTVLQGPFFSEFDLAA+A+DLD KERQ+ML     
Sbjct: 1   MERTSNGGMLYHEVQESNLCAVHCVNTVLQGPFFSEFDLAAVAADLDGKERQVMLEGAAV 60

Query: 61  GGSTTGDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNSPVAEPAQIDPELENAFI 120
           GG   GDFL+EESHNVSL GDFSIQVLQKALEVWDLQVIPLN P AEPAQIDPELE+AFI
Sbjct: 61  GGFAPGDFLAEESHNVSLGGDFSIQVLQKALEVWDLQVIPLNCPDAEPAQIDPELESAFI 120

Query: 121 CHLQDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDF 180
           CHL DHWFCIRKVNGEWYNFDSL AAPQHLSKFYLSA+LDSLKG GWSIFIV+GNFP++ 
Sbjct: 121 CHLHDHWFCIRKVNGEWYNFDSLLAAPQHLSKFYLSAFLDSLKGAGWSIFIVKGNFPQEC 180

Query: 181 PI-LSTEASNGYGQWLSPEDAERI---TKSCNTTQNPPPPQRVSWTEQQDTFLSTGEAEM 240
           P+  S+EASN +GQWLSPEDAERI   T S ++ +N      V+  ++++  LS  E + 
Sbjct: 181 PMSSSSEASNSFGQWLSPEDAERIRKNTSSGSSARNKRSNDNVN-QQRRNQALSREEVQA 240

Query: 241 LMDMEDEDLKAAIAASLMDSSAVMA--AGVGNPQKE 266
             +MED+DLKAAIAASL+D+SA  A    VG  +KE
Sbjct: 241 FSEMEDDDLKAAIAASLLDASAAEANLGAVGTSEKE 275

[Close]

BLAST of Cp4.1LG08g12170.1 vs. TAIR 10
Match: AT2G29640.1 (JOSEPHIN-like protein )

HSP 1 Score: 58.2 bits (139), Expect = 1.8e-08
Identity = 41/153 (26.80%), Postives = 70/153 (45.75%), Query Frame = 0


Query: 4   ASNGGMLYHEVQESKLCAVHCVNTVLQG-PFFSEFDLAALASDLDRKERQMMLGGSTTGD 63
           A +   +YHE Q  + C +HC+N + Q    F++  L ++A  L+  +        T   
Sbjct: 2   ADSESKIYHERQRLQFCLLHCLNNLFQDKDAFTKESLNSIAEKLETNDPNKETW--TPLS 61

Query: 64  FLSEESHNVSLDGDFSIQVLQKALE------VWDLQVIPLNSPVAEPAQ------IDPEL 123
           F+ +  HN ++ G++ + V+  ALE      VW  + I  +S   + A       ++  +
Sbjct: 62  FVLKPHHN-TITGNYDVNVMITALEGKGKSVVWHDKRIGASSIDLDDADTLMGIVLNVPV 121

Query: 124 ENAFICHLQDHWFCIRKVNGEWYNFDSLYAAPQ 144
           +         HW  +RK+NG WYN DS    PQ
Sbjct: 122 KRYGGLWRSRHWVVVRKINGVWYNLDSDLVVPQ 151

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g12170.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M391	1.1e-103	71.74	Ataxin-3 homolog OS=Arabidopsis thaliana OX=3702 GN=At3g54130 PE=1 SV=1	[more]
Q8LQ36	7.9e-94	68.32	Putative ataxin-3 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g08514...	[more]
P54252	1.8e-37	35.51	Ataxin-3 OS=Homo sapiens OX=9606 GN=ATXN3 PE=1 SV=5	[more]
O35815	5.7e-36	33.22	Ataxin-3 OS=Rattus norvegicus OX=10116 GN=Atxn3 PE=1 SV=1	[more]
Q9CVD2	7.5e-36	32.87	Ataxin-3 OS=Mus musculus OX=10090 GN=Atxn3 PE=1 SV=2	[more]

BLAST of Cp4.1LG08g12170.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539355.1	1.75e-278	100.00	ataxin-3 homolog [Cucurbita pepo subsp. pepo]	[more]
KAG6596364.1	3.22e-272	98.22	Ataxin-3-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG70279...	[more]
XP_022971387.1	4.21e-270	97.20	ataxin-3 homolog [Cucurbita maxima]	[more]
XP_022941313.1	1.41e-267	97.21	ataxin-3 homolog [Cucurbita moschata]	[more]
XP_038904645.1	8.26e-223	79.34	ataxin-3 homolog [Benincasa hispida]	[more]

BLAST of Cp4.1LG08g12170.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I1T6	2.04e-270	97.20	Ubiquitinyl hydrolase 1 OS=Cucurbita maxima OX=3661 GN=LOC111470125 PE=4 SV=1	[more]
A0A6J1FRR9	6.84e-268	97.21	Ubiquitinyl hydrolase 1 OS=Cucurbita moschata OX=3662 GN=LOC111446649 PE=4 SV=1	[more]
A0A5D3DN96	1.15e-215	78.12	Ubiquitinyl hydrolase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B6I4	1.15e-215	78.12	Ubiquitinyl hydrolase 1 OS=Cucumis melo OX=3656 GN=LOC103486329 PE=4 SV=1	[more]
A0A0A0L9Z8	1.33e-214	77.93	Ubiquitinyl hydrolase 1 OS=Cucumis sativus OX=3659 GN=Csa_3G732570 PE=4 SV=1	[more]

BLAST of Cp4.1LG08g12170.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54130.1	7.8e-105	71.74	Josephin family protein	[more]
AT2G29640.1	1.8e-08	26.80	JOSEPHIN-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01233	JOSEPHIN	coord: 11..34 score: 58.33 coord: 153..172 score: 45.0 coord: 108..127 score: 50.0 coord: 129..149 score: 33.33
None	No IPR available	GENE3D	1.10.287.10		coord: 33..74 e-value: 6.5E-62 score: 209.9
None	No IPR available	GENE3D	3.90.70.40		coord: 19..172 e-value: 6.5E-62 score: 209.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 307..362
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 307..393
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..278
None	No IPR available	PANTHER	PTHR14159:SF0	ATAXIN-3	coord: 1..339
IPR006155	Josephin domain	SMART	SM01246	Josephin_2	coord: 14..170 e-value: 1.0E-78 score: 277.5
IPR006155	Josephin domain	PFAM	PF02099	Josephin	coord: 15..168 e-value: 5.1E-49 score: 166.5
IPR006155	Josephin domain	PROSITE	PS50957	JOSEPHIN	coord: 7..182 score: 24.223135
IPR033865	Machado-Joseph disease protein	PANTHER	PTHR14159	ATAXIN-3-RELATED	coord: 1..339

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG08g12170	Cp4.1LG08g12170	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g12170.1:three_prime_utr:001	Cp4.1LG08g12170.1:three_prime_utr:001	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g12170.1:exon:002	Cp4.1LG08g12170.1:exon:002	exon
Cp4.1LG08g12170.1:exon:001	Cp4.1LG08g12170.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g12170.1:cds:001	Cp4.1LG08g12170.1:cds:001	CDS
Cp4.1LG08g12170.1:cds:002	Cp4.1LG08g12170.1:cds:002	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g12170.1:five_prime_utr:001	Cp4.1LG08g12170.1:five_prime_utr:001	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g12170.1	Cp4.1LG08g12170.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016579	protein deubiquitination
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004843	thiol-dependent deubiquitinase