Cp4.1LG08g03980.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g03980.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	stem-specific protein TSJT1-like
Location	Cp4.1LG08: 1843362 .. 1845511 (+)
Sequence length	1328
RNA-Seq Expression	Cp4.1LG08g03980.1
Synteny	Cp4.1LG08g03980.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTACAAAATTATTCTTATAAAAATAAAAATAAAAATAAAAATAACTGTGGGTGCAAGTTAGTAAATAATGAAAATTAGAGAAATAAGGAGGGGCAATAGCGGAAATTCACTAACCTTATTATTATTATTTATTTTTCTTTTTATTTCCGTCCTTCAAGACCATGCGATCCTTCATCGCCCGTATTTGCGAGTCCCTGCATTCACAAACGAAACCAATCGTGTTTTAGTTCATCTAATTTTTCTGATCGACGATCTTCGAAAATGCTCGCCGTCTTCGACAAATCGGTGGCCAAAAGTCCCGACGCTCTGCAGAGCCCTCACTCCGACTCCGTTTGGGCTCTCAAAGATGGAATTCTCGCCAAGCATTTTAGCTCTGTGTACCCTGACTCTGTCATTGTCAACCTCGGCTCCGCCGGTCTCTTGGCCTATTCCGTCGAGAAGAAAAACCCTCTCCTCCCGAGGTATTTTCATTACCTTTCTTCTTTTTCTTCATTTCTTTTGGGGAAAACCAATAGCGTTCGTCTCTGTTTTTTCTGATTGTTTCTTCATTTTTTATGTTTTTTCTGGATCTGATTGCTGATCTCATTAAGCTTCTGTATTCCTGTGATTTCATCTGCAGTGTTTTTCGTTTTGGGTTGCTGAGATTCTGTTTGAACTTACAAGAATCGAGTTTTCCTTGTTTATTTGATTTCCCCCCCCCCCCCATTCTTGGTTTTATCTGCAATCAGGGGTTTACTTACATGATATTATGTCGTTAATTTGTGTTCTTTGAGGCAACTATTGGGCATTTTTTTGTTTTGCTTCAGATTTTCCATTTTGACTCTATCAAAATTTTGGAGGGTCAAATCTTTCCAGATCAATGTTTAGTTTATATAGTTTTAAACTTATGGGATTCTTGGTTTGGTAAGATTCTTTTACACTTCATCAATCATCGATAATTTTTATGGGATTTGTGTCGAAACGTTGGGGTTTGTTTGGCTTCTTGATTCTTTATTCTTGTAAGAGCATTTGTTAGATTTGGCTGCTGTTGGAAAATTGATGAAATTTGTGTTTATAACCATAGATTATTCGCGGTTGTGGACGACATTTTCTGCTTGTTCCAAGGGCACATTGAGAATGTTGCTCAGTTGAAGCAACAATATGGATTGAACAAAGCTGCGAATGAGGTTATCATCGTTATCGAAGCGTATCGAACGTTAAGGGATCGGGGTCCATATCCAGCTGATCAGGTGGTGAGAGATATTCAAGGGAAATTTGTGTTTGTTCTATTTGACAGTTCCTCAAAAGCTGCATTTTTTGCTTCTGTAAGTTGTTGCCCTGATCCCTTAGTTTAACCATTGATTGCTGCAGATTTCTTGTGTTTTTAGCCTATTTTGTGTCTTTTTAATTCGTAGGATGCTGATGGGAGTGTTCCTCTCCACTGGGGAACTGATTCTGAGGGACAGCTTGTTCTCTCGGATGATGTAGAAATTATGAAGAAGGGTTGTGGAAAGTCATTTGCTTCTTTCCCCAAAGGTAATTTTTTATGGGAACTGTGGGCATCTCTTCTGGTATCATATCATATTCGCAGATGGTTCTTTTGTTTATTATTCATTGATTCTCTGCACTATGTTAGGTTGTTTCTTCACAACGTCCGGTGGGTTGAGGAGTTTTGAGCATCCACTGAATGAGCTGAAGCCAGTGCCAAGGGTGGACAGTTCAGGTCATGTCTGTGGAGCCAATTTCAAGGTGGATGAAGAGGCTCGAAAGGAAAGTTCTGGCATGCCAAGAGTTGGGAGTGCTGCAAACTGGTCATCAAACTATTGAGTGCACTATTCGGCAAAGGCTTTGTTTACTTTGGCCTTGGCCTTCCTCCAGCCTCTTTCCATATTTCCATATTTCCATATTTCCATATTTCCATATTTCATTACTCTTTAACTGTGCCTTGTAAATGGGTACTTAGGGTTTATACTTCCCTTCCCGTTATGGGCATGTTTATGCAGTTACAACTTAATATCATATGAAACTTGCTGTGGCTTATTTGAGTTACATTCTAGATACGTGGAATAATAGTCTGTTTCTAAATGTTTTTGGGGTTGCCCTTCTCTAACAATTGGCTCTATATGTGTTCATAATGGCTGAAGGGGGGCATTTATCCAAACAGATTTT

mRNA sequence

CCCTACAAAATTATTCTTATAAAAATAAAAATAAAAATAAAAATAACTGTGGGTGCAAGTTAGTAAATAATGAAAATTAGAGAAATAAGGAGGGGCAATAGCGGAAATTCACTAACCTTATTATTATTATTTATTTTTCTTTTTATTTCCGTCCTTCAAGACCATGCGATCCTTCATCGCCCGTATTTGCGAGTCCCTGCATTCACAAACGAAACCAATCGTGTTTTAGTTCATCTAATTTTTCTGATCGACGATCTTCGAAAATGCTCGCCGTCTTCGACAAATCGGTGGCCAAAAGTCCCGACGCTCTGCAGAGCCCTCACTCCGACTCCGTTTGGGCTCTCAAAGATGGAATTCTCGCCAAGCATTTTAGCTCTGTGTACCCTGACTCTGTCATTGTCAACCTCGGCTCCGCCGGTCTCTTGGCCTATTCCGTCGAGAAGAAAAACCCTCTCCTCCCGAGATTATTCGCGGTTGTGGACGACATTTTCTGCTTGTTCCAAGGGCACATTGAGAATGTTGCTCAGTTGAAGCAACAATATGGATTGAACAAAGCTGCGAATGAGGTTATCATCGTTATCGAAGCGTATCGAACGTTAAGGGATCGGGGTCCATATCCAGCTGATCAGGTGGTGAGAGATATTCAAGGGAAATTTGTGTTTGTTCTATTTGACAGTTCCTCAAAAGCTGCATTTTTTGCTTCTGATGCTGATGGGAGTGTTCCTCTCCACTGGGGAACTGATTCTGAGGGACAGCTTGTTCTCTCGGATGATGTAGAAATTATGAAGAAGGGTTGTGGAAAGTCATTTGCTTCTTTCCCCAAAGGTTGTTTCTTCACAACGTCCGGTGGGTTGAGGAGTTTTGAGCATCCACTGAATGAGCTGAAGCCAGTGCCAAGGGTGGACAGTTCAGGTCATGTCTGTGGAGCCAATTTCAAGGTGGATGAAGAGGCTCGAAAGGAAAGTTCTGGCATGCCAAGAGTTGGGAGTGCTGCAAACTGGTCATCAAACTATTGAGTGCACTATTCGGCAAAGGCTTTGTTTACTTTGGCCTTGGCCTTCCTCCAGCCTCTTTCCATATTTCCATATTTCCATATTTCCATATTTCCATATGGGTACTTAGGGTTTATACTTCCCTTCCCGTTATGGGCATGTTTATGCAGTTACAACTTAATATCATATGAAACTTGCTGTGGCTTATTTGAGTTACATTCTAGATACGTGGAATAATAGTCTGTTTCTAAATGTTTTTGGGGTTGCCCTTCTCTAACAATTGGCTCTATATGTGTTCATAATGGCTGAAGGGGGGCATTTATCCAAACAGATTTT

Coding sequence (CDS)

ATGCTCGCCGTCTTCGACAAATCGGTGGCCAAAAGTCCCGACGCTCTGCAGAGCCCTCACTCCGACTCCGTTTGGGCTCTCAAAGATGGAATTCTCGCCAAGCATTTTAGCTCTGTGTACCCTGACTCTGTCATTGTCAACCTCGGCTCCGCCGGTCTCTTGGCCTATTCCGTCGAGAAGAAAAACCCTCTCCTCCCGAGATTATTCGCGGTTGTGGACGACATTTTCTGCTTGTTCCAAGGGCACATTGAGAATGTTGCTCAGTTGAAGCAACAATATGGATTGAACAAAGCTGCGAATGAGGTTATCATCGTTATCGAAGCGTATCGAACGTTAAGGGATCGGGGTCCATATCCAGCTGATCAGGTGGTGAGAGATATTCAAGGGAAATTTGTGTTTGTTCTATTTGACAGTTCCTCAAAAGCTGCATTTTTTGCTTCTGATGCTGATGGGAGTGTTCCTCTCCACTGGGGAACTGATTCTGAGGGACAGCTTGTTCTCTCGGATGATGTAGAAATTATGAAGAAGGGTTGTGGAAAGTCATTTGCTTCTTTCCCCAAAGGTTGTTTCTTCACAACGTCCGGTGGGTTGAGGAGTTTTGAGCATCCACTGAATGAGCTGAAGCCAGTGCCAAGGGTGGACAGTTCAGGTCATGTCTGTGGAGCCAATTTCAAGGTGGATGAAGAGGCTCGAAAGGAAAGTTCTGGCATGCCAAGAGTTGGGAGTGCTGCAAACTGGTCATCAAACTATTGA

Protein sequence

MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEKKNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGKSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRVGSAANWSSNY

Homology

[Close]

BLAST of Cp4.1LG08g03980.1 vs. ExPASy Swiss-Prot
Match: P24805 (Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.5e-29
Identity = 60/148 (40.54%), Postives = 93/148 (62.84%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHS--DSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSV 60
           MLAVF++S+ + P  L  P +      A     +A+ F +   DS   +L +   +A+S 
Sbjct: 1   MLAVFEQSIGRPPPELSLPQAGIQKKEAKTREEIAESFKTWKQDSTFYHLFNGNFMAFSH 60

Query: 61  EKKNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPY 120
             +NPL PR   V+DD+FC+F G ++N   L++ YGL++ A E +I++EAY+ LRDR PY
Sbjct: 61  GNENPLQPRSIVVMDDVFCIFSGALDNTFDLRKHYGLSRQATEAMIMVEAYKVLRDRAPY 120

Query: 121 PADQVVRDIQGKFVFVLFDSSSKAAFFA 147
           P DQV+++++GKF F+LFDS +   F A
Sbjct: 121 PPDQVIKELEGKFAFILFDSKASTLFLA 148

[Close]

BLAST of Cp4.1LG08g03980.1 vs. ExPASy Swiss-Prot
Match: P22106 (Asparagine synthetase B [glutamine-hydrolyzing] OS=Escherichia coli (strain K12) OX=83333 GN=asnB PE=1 SV=3)

HSP 1 Score: 60.1 bits (144), Expect = 4.2e-08
Identity = 35/126 (27.78%), Postives = 65/126 (51.59%), Query Frame = 0


Query: 81  GHIENVAQLKQQYGLN---KAANEVIIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFD 140
           G I N   L+ +YG     +  ++  +++  Y   +++GP    + + D+QG F F L+D
Sbjct: 76  GEIYNHQALRAEYGDRYQFQTGSDCEVILALY---QEKGP----EFLDDLQGMFAFALYD 135

Query: 141 SSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGKSFASFPKGCF-FTTSGG 200
           S   A     D  G +PL+ G D  GQL ++ +++ +   C ++   FP G + ++  G 
Sbjct: 136 SEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVC-RTIKEFPAGSYLWSQDGE 193

Query: 201 LRSFEH 203
           +RS+ H
Sbjct: 196 IRSYYH 193

[Close]

BLAST of Cp4.1LG08g03980.1 vs. ExPASy Swiss-Prot
Match: Q43011 (Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0265000 PE=2 SV=3)

HSP 1 Score: 53.5 bits (127), Expect = 3.9e-06
Identity = 36/126 (28.57%), Postives = 61/126 (48.41%), Query Frame = 0


Query: 81  GHIENVAQLKQQYGLNK--AANEVIIVIEAYRTLRDRGPYPADQVVRDIQGKFVFVLFDS 140
           G I N  +LK     +K   A++  ++   Y           ++ V  + G F FVL D+
Sbjct: 76  GEIYNHEELKANLKSHKFQTASDCEVIAHLYEEY-------GEEFVDMLDGMFAFVLLDT 135

Query: 141 SSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGKSFASFPKGCFFTT-SGGL 200
             K+   A DA G  PL+ G   +G +  S +++ +   C + F SFP G  +++ +GGL
Sbjct: 136 RDKSFIAARDAIGICPLYMGWGLDGSVWFSSEMKALSDDC-ERFISFPPGHLYSSKTGGL 193

Query: 201 RSFEHP 204
           R + +P
Sbjct: 196 RRWYNP 193

[Close]

BLAST of Cp4.1LG08g03980.1 vs. ExPASy Swiss-Prot
Match: Q10MX3 (Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0291500 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.7e-06
Identity = 35/133 (26.32%), Postives = 64/133 (48.12%), Query Frame = 0


Query: 75  IFCLFQGHIENVAQLKQQYGLN---KAANEVIIVIEAYRTLRDRGPYPADQVVRDIQGKF 134
           I  +  G I N  ++++Q+         ++  ++I  Y           +  V  + G F
Sbjct: 70  IVVVANGEIYNHKKIRKQFASKHTFSTGSDCEVIIPLYEEY-------GEDFVDMLDGVF 129

Query: 135 VFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGKSFASFPKGCFF 194
            FVL+D+ +K    A DA G  PL+ G  S+G + +S +++ + + C   F  FP G  +
Sbjct: 130 AFVLYDTRTKTYMAARDAIGVNPLYIGRGSDGAVWISSEMKALNEDC-VEFEIFPPGHLY 189

Query: 195 TT-SGGLRSFEHP 204
           ++ +GGLR +  P
Sbjct: 190 SSAAGGLRRWYKP 194

[Close]

BLAST of Cp4.1LG08g03980.1 vs. ExPASy Swiss-Prot
Match: Q9LV77 (Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Arabidopsis thaliana OX=3702 GN=ASN2 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 5.7e-05
Identity = 26/84 (30.95%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 121 DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK 180
           ++ +  + G F FVL D+  K+   A DA G  PL+ G   +G +  + +++ +   C +
Sbjct: 111 EEFIDMLDGMFAFVLLDTRDKSFIAARDAIGITPLYIGWGLDGSVWFASEMKALSDDC-E 170

Query: 181 SFASFPKGCFFTT-SGGLRSFEHP 204
            F SFP G  +++  GGLR + +P
Sbjct: 171 QFMSFPPGHIYSSKQGGLRRWYNP 193

[Close]

BLAST of Cp4.1LG08g03980.1 vs. NCBI nr
Match: XP_022947693.1 (stem-specific protein TSJT1-like [Cucurbita moschata] >XP_022974438.1 stem-specific protein TSJT1-like [Cucurbita maxima] >XP_023540849.1 stem-specific protein TSJT1-like [Cucurbita pepo subsp. pepo] >KAG6597414.1 Stem-specific protein TSJT1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 508 bits (1309), Expect = 8.64e-182
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60
           MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK
Sbjct: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60

Query: 61  KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120
           KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA
Sbjct: 61  KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120

Query: 121 DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK 180
           DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK
Sbjct: 121 DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK 180

Query: 181 SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV 240
           SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV
Sbjct: 181 SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV 240

Query: 241 GSAANWSSNY 250
           GSAANWSSNY
Sbjct: 241 GSAANWSSNY 250

[Close]

BLAST of Cp4.1LG08g03980.1 vs. NCBI nr
Match: KAG7028873.1 (Stem-specific protein TSJT1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 508 bits (1309), Expect = 6.02e-181
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60
           MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK
Sbjct: 54  MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 113

Query: 61  KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120
           KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA
Sbjct: 114 KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 173

Query: 121 DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK 180
           DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK
Sbjct: 174 DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK 233

Query: 181 SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV 240
           SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV
Sbjct: 234 SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV 293

Query: 241 GSAANWSSNY 250
           GSAANWSSNY
Sbjct: 294 GSAANWSSNY 303

[Close]

BLAST of Cp4.1LG08g03980.1 vs. NCBI nr
Match: XP_022138225.1 (stem-specific protein TSJT1 [Momordica charantia])

HSP 1 Score: 485 bits (1249), Expect = 1.22e-172
Identity = 235/250 (94.00%), Postives = 243/250 (97.20%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60
           MLAVFDKSVAK+P+ALQSPHSDSVWALKDGIL +HF S+YP SVIVNLGSAGLLAYSVEK
Sbjct: 1   MLAVFDKSVAKTPEALQSPHSDSVWALKDGILGRHFGSLYPASVIVNLGSAGLLAYSVEK 60

Query: 61  KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120
           +NPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA
Sbjct: 61  QNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120

Query: 121 DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK 180
           DQVVRDIQGKFVFVL+DSSSK AFFASDADGSVPLHWG+DSEG LVLSDD+E MKKGCGK
Sbjct: 121 DQVVRDIQGKFVFVLYDSSSKTAFFASDADGSVPLHWGSDSEGHLVLSDDIETMKKGCGK 180

Query: 181 SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV 240
           SFA FPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV
Sbjct: 181 SFAPFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV 240

Query: 241 GSAANWSSNY 250
           GSAANWSSNY
Sbjct: 241 GSAANWSSNY 250

[Close]

BLAST of Cp4.1LG08g03980.1 vs. NCBI nr
Match: XP_038878034.1 (stem-specific protein TSJT1 [Benincasa hispida])

HSP 1 Score: 485 bits (1249), Expect = 1.22e-172
Identity = 238/250 (95.20%), Postives = 243/250 (97.20%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60
           MLAVFDKSVAKSPDALQSP SDSVWALKDGILA+HFSSVYP SVIVNLGSAGLLAYSVEK
Sbjct: 1   MLAVFDKSVAKSPDALQSPESDSVWALKDGILAQHFSSVYPGSVIVNLGSAGLLAYSVEK 60

Query: 61  KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120
           +NPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA
Sbjct: 61  QNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120

Query: 121 DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK 180
           DQVVRDIQGKFVFVL+DSSSK AFFASDADGSVP HWGTDSEGQLVLSDDVE MKKGCGK
Sbjct: 121 DQVVRDIQGKFVFVLYDSSSKTAFFASDADGSVPFHWGTDSEGQLVLSDDVETMKKGCGK 180

Query: 181 SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV 240
           SFA FPKGCFFTTSGGLRS+EHPLNELKPVPRVDSSG+VCGANFKVD EARKESSGMPRV
Sbjct: 181 SFAPFPKGCFFTTSGGLRSYEHPLNELKPVPRVDSSGNVCGANFKVDAEARKESSGMPRV 240

Query: 241 GSAANWSSNY 250
           GSAANWSSNY
Sbjct: 241 GSAANWSSNY 250

[Close]

BLAST of Cp4.1LG08g03980.1 vs. NCBI nr
Match: XP_008438612.1 (PREDICTED: stem-specific protein TSJT1 [Cucumis melo] >KAA0049327.1 stem-specific protein TSJT1 [Cucumis melo var. makuwa] >TYK17231.1 stem-specific protein TSJT1 [Cucumis melo var. makuwa])

HSP 1 Score: 481 bits (1239), Expect = 4.07e-171
Identity = 235/250 (94.00%), Postives = 242/250 (96.80%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60
           MLAVF+KSVAKSPDALQSP SDS WALKDGILA+HFSS YP SVIVNLGSAGLLAYSVEK
Sbjct: 1   MLAVFEKSVAKSPDALQSPESDSTWALKDGILAQHFSSAYPGSVIVNLGSAGLLAYSVEK 60

Query: 61  KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120
           +NPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA
Sbjct: 61  QNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120

Query: 121 DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK 180
           DQVVRDIQGKFVFVL+DSSSK +FFASDADGSVP HWGTDSEGQLVLSDDVEIMKKGCGK
Sbjct: 121 DQVVRDIQGKFVFVLYDSSSKTSFFASDADGSVPFHWGTDSEGQLVLSDDVEIMKKGCGK 180

Query: 181 SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV 240
           SFA FPKGCFFTTSGGLRS+EHPLNELKPVPRVDSSG+VCGANFKVD EARKESSGMPRV
Sbjct: 181 SFAPFPKGCFFTTSGGLRSYEHPLNELKPVPRVDSSGNVCGANFKVDAEARKESSGMPRV 240

Query: 241 GSAANWSSNY 250
           GSAANWSSNY
Sbjct: 241 GSAANWSSNY 250

[Close]

BLAST of Cp4.1LG08g03980.1 vs. ExPASy TrEMBL
Match: A0A6J1IG81 (stem-specific protein TSJT1-like OS=Cucurbita maxima OX=3661 GN=LOC111473103 PE=4 SV=1)

HSP 1 Score: 508 bits (1309), Expect = 4.19e-182
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60
           MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK
Sbjct: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60

Query: 61  KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120
           KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA
Sbjct: 61  KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120

Query: 121 DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK 180
           DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK
Sbjct: 121 DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK 180

Query: 181 SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV 240
           SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV
Sbjct: 181 SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV 240

Query: 241 GSAANWSSNY 250
           GSAANWSSNY
Sbjct: 241 GSAANWSSNY 250

[Close]

BLAST of Cp4.1LG08g03980.1 vs. ExPASy TrEMBL
Match: A0A6J1G7B2 (stem-specific protein TSJT1-like OS=Cucurbita moschata OX=3662 GN=LOC111451479 PE=4 SV=1)

HSP 1 Score: 508 bits (1309), Expect = 4.19e-182
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60
           MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK
Sbjct: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60

Query: 61  KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120
           KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA
Sbjct: 61  KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120

Query: 121 DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK 180
           DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK
Sbjct: 121 DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK 180

Query: 181 SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV 240
           SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV
Sbjct: 181 SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV 240

Query: 241 GSAANWSSNY 250
           GSAANWSSNY
Sbjct: 241 GSAANWSSNY 250

[Close]

BLAST of Cp4.1LG08g03980.1 vs. ExPASy TrEMBL
Match: A0A6J1C8V4 (stem-specific protein TSJT1 OS=Momordica charantia OX=3673 GN=LOC111009449 PE=4 SV=1)

HSP 1 Score: 485 bits (1249), Expect = 5.89e-173
Identity = 235/250 (94.00%), Postives = 243/250 (97.20%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60
           MLAVFDKSVAK+P+ALQSPHSDSVWALKDGIL +HF S+YP SVIVNLGSAGLLAYSVEK
Sbjct: 1   MLAVFDKSVAKTPEALQSPHSDSVWALKDGILGRHFGSLYPASVIVNLGSAGLLAYSVEK 60

Query: 61  KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120
           +NPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA
Sbjct: 61  QNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120

Query: 121 DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK 180
           DQVVRDIQGKFVFVL+DSSSK AFFASDADGSVPLHWG+DSEG LVLSDD+E MKKGCGK
Sbjct: 121 DQVVRDIQGKFVFVLYDSSSKTAFFASDADGSVPLHWGSDSEGHLVLSDDIETMKKGCGK 180

Query: 181 SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV 240
           SFA FPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV
Sbjct: 181 SFAPFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV 240

Query: 241 GSAANWSSNY 250
           GSAANWSSNY
Sbjct: 241 GSAANWSSNY 250

[Close]

BLAST of Cp4.1LG08g03980.1 vs. ExPASy TrEMBL
Match: A0A5D3CZ34 (Stem-specific protein TSJT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00820 PE=4 SV=1)

HSP 1 Score: 481 bits (1239), Expect = 1.97e-171
Identity = 235/250 (94.00%), Postives = 242/250 (96.80%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60
           MLAVF+KSVAKSPDALQSP SDS WALKDGILA+HFSS YP SVIVNLGSAGLLAYSVEK
Sbjct: 1   MLAVFEKSVAKSPDALQSPESDSTWALKDGILAQHFSSAYPGSVIVNLGSAGLLAYSVEK 60

Query: 61  KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120
           +NPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA
Sbjct: 61  QNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120

Query: 121 DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK 180
           DQVVRDIQGKFVFVL+DSSSK +FFASDADGSVP HWGTDSEGQLVLSDDVEIMKKGCGK
Sbjct: 121 DQVVRDIQGKFVFVLYDSSSKTSFFASDADGSVPFHWGTDSEGQLVLSDDVEIMKKGCGK 180

Query: 181 SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV 240
           SFA FPKGCFFTTSGGLRS+EHPLNELKPVPRVDSSG+VCGANFKVD EARKESSGMPRV
Sbjct: 181 SFAPFPKGCFFTTSGGLRSYEHPLNELKPVPRVDSSGNVCGANFKVDAEARKESSGMPRV 240

Query: 241 GSAANWSSNY 250
           GSAANWSSNY
Sbjct: 241 GSAANWSSNY 250

[Close]

BLAST of Cp4.1LG08g03980.1 vs. ExPASy TrEMBL
Match: A0A1S3AXH1 (stem-specific protein TSJT1 OS=Cucumis melo OX=3656 GN=LOC103483669 PE=4 SV=1)

HSP 1 Score: 481 bits (1239), Expect = 1.97e-171
Identity = 235/250 (94.00%), Postives = 242/250 (96.80%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60
           MLAVF+KSVAKSPDALQSP SDS WALKDGILA+HFSS YP SVIVNLGSAGLLAYSVEK
Sbjct: 1   MLAVFEKSVAKSPDALQSPESDSTWALKDGILAQHFSSAYPGSVIVNLGSAGLLAYSVEK 60

Query: 61  KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120
           +NPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA
Sbjct: 61  QNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120

Query: 121 DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK 180
           DQVVRDIQGKFVFVL+DSSSK +FFASDADGSVP HWGTDSEGQLVLSDDVEIMKKGCGK
Sbjct: 121 DQVVRDIQGKFVFVLYDSSSKTSFFASDADGSVPFHWGTDSEGQLVLSDDVEIMKKGCGK 180

Query: 181 SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV 240
           SFA FPKGCFFTTSGGLRS+EHPLNELKPVPRVDSSG+VCGANFKVD EARKESSGMPRV
Sbjct: 181 SFAPFPKGCFFTTSGGLRSYEHPLNELKPVPRVDSSGNVCGANFKVDAEARKESSGMPRV 240

Query: 241 GSAANWSSNY 250
           GSAANWSSNY
Sbjct: 241 GSAANWSSNY 250

[Close]

BLAST of Cp4.1LG08g03980.1 vs. TAIR 10
Match: AT3G22850.1 (Aluminium induced protein with YGL and LRDR motifs )

HSP 1 Score: 377.9 bits (969), Expect = 6.5e-105
Identity = 181/247 (73.28%), Postives = 206/247 (83.40%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVEK 60
           MLA+FDK+VAK+P+ALQ     SV ALKD  L  HFSSVYP +V +NLGS+G +A S+EK
Sbjct: 1   MLAIFDKNVAKTPEALQGQEGGSVCALKDRFLPNHFSSVYPGAVTINLGSSGFIACSLEK 60

Query: 61  KNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYPA 120
           +NPLLPRLFAVVDD+FC+FQGHIENV  LKQQYGL K A EV IVIEAYRTLRDRGPY A
Sbjct: 61  QNPLLPRLFAVVDDMFCIFQGHIENVPILKQQYGLTKTATEVTIVIEAYRTLRDRGPYSA 120

Query: 121 DQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCGK 180
           +QVVRD QGKF F+L+D S++  F A D DGSVPL+WGTD+EG LV+SDDVE +KKGCGK
Sbjct: 121 EQVVRDFQGKFGFMLYDCSTQNVFLAGDVDGSVPLYWGTDAEGHLVVSDDVETVKKGCGK 180

Query: 181 SFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPRV 240
           SFA FPKGCFFT+SGGLRS+EHP NELKPVPRVDSSG VCG  FKVD EA+KE+  MPRV
Sbjct: 181 SFAPFPKGCFFTSSGGLRSYEHPSNELKPVPRVDSSGEVCGVTFKVDSEAKKEA--MPRV 240

Query: 241 GSAANWS 248
           GS  NWS
Sbjct: 241 GSVQNWS 245

[Close]

BLAST of Cp4.1LG08g03980.1 vs. TAIR 10
Match: AT5G43830.1 (Aluminium induced protein with YGL and LRDR motifs )

HSP 1 Score: 372.1 bits (954), Expect = 3.5e-103
Identity = 176/250 (70.40%), Postives = 206/250 (82.40%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPH-SDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYSVE 60
           MLAVF+K+VA SP+ALQSPH S+S +ALKDG LA HF+SV P+SV +N GS+G +AYS++
Sbjct: 1   MLAVFEKTVANSPEALQSPHSSESAFALKDGSLATHFASVNPNSVTLNFGSSGFVAYSLD 60

Query: 61  KKNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYP 120
             +P +PRLFAVVDDIFCLFQGHIEN+  LKQQYGLNK  NE IIVIEAYRTLRDRGPYP
Sbjct: 61  NPDPRVPRLFAVVDDIFCLFQGHIENLPFLKQQYGLNKITNEAIIVIEAYRTLRDRGPYP 120

Query: 121 ADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCG 180
            D+VVRD  GKF F+LFDS  K  F A+DADGSVP  WGTD+EG LV SD+ E++KKGC 
Sbjct: 121 VDKVVRDFHGKFAFILFDSVKKTVFAAADADGSVPFFWGTDAEGHLVFSDNTEMVKKGCA 180

Query: 181 KSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSGMPR 240
           KS+  FPKGCFFT+SGGLRSFEHP NELKPVPRVDSSG VCGA FKVD E ++E + MPR
Sbjct: 181 KSYGPFPKGCFFTSSGGLRSFEHPKNELKPVPRVDSSGDVCGATFKVDAETKREGTKMPR 240

Query: 241 VGSAANWSSN 250
           V S+ NW+ +
Sbjct: 241 VDSSQNWAGH 250

[Close]

BLAST of Cp4.1LG08g03980.1 vs. TAIR 10
Match: AT4G27450.1 (Aluminium induced protein with YGL and LRDR motifs )

HSP 1 Score: 245.0 bits (624), Expect = 6.5e-65
Identity = 126/252 (50.00%), Postives = 168/252 (66.67%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVW---ALKDGILAKHFSSVYP-DSVIVNLGSAGLLAY 60
           MLA+F ++ A  P+ L SP S+       L +  L   F   YP ++  ++ G A +LAY
Sbjct: 1   MLAIFHEAFAHPPEELNSPASEKCSKQPKLPEETL-NDFLLRYPLNTFSMSFGQAAVLAY 60

Query: 61  SVEKKN-PLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDR 120
                +  +  RLF   DDI+CLF G + N+ QL +QYGL K  NE + VIEAYRTLRDR
Sbjct: 61  VRPSASFSIHQRLFCGFDDIYCLFFGSLNNLCQLNKQYGLTKTTNEAMFVIEAYRTLRDR 120

Query: 121 GPYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMK 180
           GPYPADQVV+D+ G F FV++DS + + F A  +DG V L+WG  ++G +V+SDD++++K
Sbjct: 121 GPYPADQVVKDLDGSFSFVVYDSKAGSVFTALGSDGGVKLYWGIAADGSVVISDDLDVIK 180

Query: 181 KGCGKSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESS 240
           +GC KSFA FP GC F + GGL SFEHP+N++K +PRVDS G +CGANFKVD   R  S 
Sbjct: 181 EGCAKSFAPFPTGCMFHSEGGLMSFEHPMNKIKAMPRVDSEGVLCGANFKVDVYNRVNS- 240

Query: 241 GMPRVGSAANWS 248
            +PR GS ANWS
Sbjct: 241 -IPRRGSEANWS 249

[Close]

BLAST of Cp4.1LG08g03980.1 vs. TAIR 10
Match: AT3G15450.1 (Aluminium induced protein with YGL and LRDR motifs )

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-61
Identity = 115/251 (45.82%), Postives = 165/251 (65.74%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSP---HSDSVWALKDGILAKHFSSVYPDSVIVNLGSAGLLAYS 60
           MLA+F K+ A  P+ L SP    S     L    L+   S    ++  +N G + +LAY+
Sbjct: 1   MLAIFQKAFAHPPEELNSPASHFSGKTPKLPGETLSDFLSHHQNNAFSMNFGDSAVLAYA 60

Query: 61  VEKKNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLN-KAANEVIIVIEAYRTLRDRG 120
             ++  L  RLF  +D I+C+F G + N+  L +QYGL+ K +NE + VIEAYRTLRDRG
Sbjct: 61  -RQETSLRQRLFCGLDGIYCMFLGRLNNLCTLNRQYGLSGKNSNEAMFVIEAYRTLRDRG 120

Query: 121 PYPADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKK 180
           PYPADQV+R ++G F FV++D+ + + F A  +DG   L+WG   +G +V+SDD++I+K+
Sbjct: 121 PYPADQVLRGLEGSFAFVVYDTQTSSVFSALSSDGGESLYWGISGDGSVVMSDDIQIIKQ 180

Query: 181 GCGKSFASFPKGCFFTTSGGLRSFEHPLNELKPVPRVDSSGHVCGANFKVDEEARKESSG 240
           GC KSFA FP GC F +  GL+SF+HP N +K +PR+DS G +CGA+FKVD  A  + + 
Sbjct: 181 GCAKSFAPFPNGCMFHSETGLKSFDHPTNMMKAMPRIDSEGVLCGASFKVD--ACSKINS 240

Query: 241 MPRVGSAANWS 248
           +PR GS ANW+
Sbjct: 241 IPRRGSEANWA 248

[Close]

BLAST of Cp4.1LG08g03980.1 vs. TAIR 10
Match: AT5G19140.1 (Aluminium induced protein with YGL and LRDR motifs )

HSP 1 Score: 220.7 bits (561), Expect = 1.3e-57
Identity = 109/229 (47.60%), Postives = 149/229 (65.07%), Query Frame = 0


Query: 1   MLAVFDKSVAKSPDALQSPHSDSVWALKDG-ILAKHFSSVYPDSVIVNLGSAGLLAYSVE 60
           ML +F  ++   P+ L +  S +      G  L   F    P +V V +G    LAYS  
Sbjct: 1   MLGIFSGAIVSPPEELVAAGSRTPSPKTTGSTLVNRFVEKNPSAVSVQVGDYVQLAYSHH 60

Query: 61  KKNPLLPRLFAVVDDIFCLFQGHIENVAQLKQQYGLNKAANEVIIVIEAYRTLRDRGPYP 120
            ++PL PR F   D+IFCLFQG ++N+  LKQQYGL K ANEV++VIEAY+TLRDR PYP
Sbjct: 61  NESPLRPRSFGAKDEIFCLFQGSLDNLGSLKQQYGLAKNANEVLLVIEAYKTLRDRAPYP 120

Query: 121 ADQVVRDIQGKFVFVLFDSSSKAAFFASDADGSVPLHWGTDSEGQLVLSDDVEIMKKGCG 180
           A+ VV  + G F FV+FD S+   F ASD  G VPL+WG  ++G +  +DDV+++K  CG
Sbjct: 121 ANHVVAHLSGDFAFVVFDKSTSTLFVASDQVGKVPLYWGITADGYVAFADDVDLLKGACG 180

Query: 181 KSFASFPKGCFFTTS-GGLRSFEHPLNELKPVPRVDSSGHVCGANFKVD 228
           KS ASFP+GC+++T+ GGLRSFE+P N++  VP   + G + GA FKV+
Sbjct: 181 KSLASFPQGCYYSTALGGLRSFENPKNKITAVPA--NEGEIWGATFKVE 227

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g03980.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P24805	2.5e-29	40.54	Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1	[more]
P22106	4.2e-08	27.78	Asparagine synthetase B [glutamine-hydrolyzing] OS=Escherichia coli (strain K12)...	[more]
Q43011	3.9e-06	28.57	Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Oryza sativa subsp. japonica ...	[more]
Q10MX3	8.7e-06	26.32	Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Oryza sativa subsp. japonica ...	[more]
Q9LV77	5.7e-05	30.95	Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cp4.1LG08g03980.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947693.1	8.64e-182	100.00	stem-specific protein TSJT1-like [Cucurbita moschata] >XP_022974438.1 stem-speci...	[more]
KAG7028873.1	6.02e-181	100.00	Stem-specific protein TSJT1, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022138225.1	1.22e-172	94.00	stem-specific protein TSJT1 [Momordica charantia]	[more]
XP_038878034.1	1.22e-172	95.20	stem-specific protein TSJT1 [Benincasa hispida]	[more]
XP_008438612.1	4.07e-171	94.00	PREDICTED: stem-specific protein TSJT1 [Cucumis melo] >KAA0049327.1 stem-specifi...	[more]

BLAST of Cp4.1LG08g03980.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IG81	4.19e-182	100.00	stem-specific protein TSJT1-like OS=Cucurbita maxima OX=3661 GN=LOC111473103 PE=...	[more]
A0A6J1G7B2	4.19e-182	100.00	stem-specific protein TSJT1-like OS=Cucurbita moschata OX=3662 GN=LOC111451479 P...	[more]
A0A6J1C8V4	5.89e-173	94.00	stem-specific protein TSJT1 OS=Momordica charantia OX=3673 GN=LOC111009449 PE=4 ...	[more]
A0A5D3CZ34	1.97e-171	94.00	Stem-specific protein TSJT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3AXH1	1.97e-171	94.00	stem-specific protein TSJT1 OS=Cucumis melo OX=3656 GN=LOC103483669 PE=4 SV=1	[more]

BLAST of Cp4.1LG08g03980.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22850.1	6.5e-105	73.28	Aluminium induced protein with YGL and LRDR motifs	[more]
AT5G43830.1	3.5e-103	70.40	Aluminium induced protein with YGL and LRDR motifs	[more]
AT4G27450.1	6.5e-65	50.00	Aluminium induced protein with YGL and LRDR motifs	[more]
AT3G15450.1	1.2e-61	45.82	Aluminium induced protein with YGL and LRDR motifs	[more]
AT5G19140.1	1.3e-57	47.60	Aluminium induced protein with YGL and LRDR motifs	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024286	Domain of unknown function DUF3700	SMART	SM01172	DUF3700_2	coord: 2..226 e-value: 4.8E-150 score: 514.5
IPR024286	Domain of unknown function DUF3700	PFAM	PF12481	DUF3700	coord: 2..226 e-value: 1.1E-111 score: 371.8
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	coord: 57..201 e-value: 1.3E-13 score: 52.6
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 72..194
None	No IPR available	PIRSR	PIRSR001589-2	PIRSR001589-2	coord: 77..190 e-value: 2.4E-6 score: 24.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..250
None	No IPR available	PANTHER	PTHR45952:SF4	ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS	coord: 1..250
None	No IPR available	CDD	cd01910	Wali7	coord: 2..226 e-value: 6.00215E-140 score: 390.132
IPR044828	Stem-specific protein TSJT1-like	PANTHER	PTHR45952	ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS	coord: 1..250

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG08g03980	Cp4.1LG08g03980	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g03980.1:five_prime_utr:001	Cp4.1LG08g03980.1:five_prime_utr:001	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g03980.1:exon:001	Cp4.1LG08g03980.1:exon:001	exon
Cp4.1LG08g03980.1:exon:002	Cp4.1LG08g03980.1:exon:002	exon
Cp4.1LG08g03980.1:exon:003	Cp4.1LG08g03980.1:exon:003	exon
Cp4.1LG08g03980.1:exon:004	Cp4.1LG08g03980.1:exon:004	exon
Cp4.1LG08g03980.1:exon:005	Cp4.1LG08g03980.1:exon:005	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g03980.1:cds:004	Cp4.1LG08g03980.1:cds:004	CDS
Cp4.1LG08g03980.1:cds:003	Cp4.1LG08g03980.1:cds:003	CDS
Cp4.1LG08g03980.1:cds:002	Cp4.1LG08g03980.1:cds:002	CDS
Cp4.1LG08g03980.1:cds:001	Cp4.1LG08g03980.1:cds:001	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g03980.1:three_prime_utr:002	Cp4.1LG08g03980.1:three_prime_utr:002	three_prime_UTR
Cp4.1LG08g03980.1:three_prime_utr:001	Cp4.1LG08g03980.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG08g03980.1	Cp4.1LG08g03980.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016787	hydrolase activity