Cp4.1LG07g01320.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TAAACAAGAAGGAGAAAAAAAGAAGAAGAAAGCGCGCTCACCGCCCCCAGGTCGAACTGCGCGGGAAGATGCCGAGCTCTTCAAACCTTGGAGGTTTCTGAAGCTTCCCTAAAATTCCGACATCACTTTCGCCGGAAGTCTCAAAGATTTCCCGTCGCTGTTTTCAGCGCTTCAATTCTCCTTTTTATCTTATCGTCGGCTTAGTCCGGGGTAAGCTATGGAATTACTTCAGTTTTATTATCAATAGTCTCTCATGTTTTGTCAATATTGTCTATTAGAATCACTTTTCATCCACGATCAAGCCCGACCTATCTGTTAAAATCGTTCTTGTTGATGTATATATATATATGTTCATATATAGTGATTTTGGAAATCCACCGTTGTTCTGTCATGACTTCAGTTGTTGATTTCGATTGCATATGTTCATTTGACCTCGAATTGATTTTGATTTTCGTTTTATTGTAAGGGAGATTGTTGAGTATGGCAAGTTCAGGAGATTATCTTTCCCAGATTGACATTTCGAACGAGGTATGAGATTGTTCTCTCTGCATAAAGCCCTGTATGAACTATTTGGAAATTGAGGGTTTGCTCCTTGTATCGCCCTCGCATGGTTAATATTTCTGATTCCGAAACCACTTTTAATCGATAGGAAAAGGACAAGCTCGTGGCGGAAGTTATCCGCTATATCATATTCAAAACTCATCAAAATTCTGGATGTCCCATCAAAAGGGAAGAGCTTACTCAGATCGTAACAAAAAATTATAGGAATCGAGGATTGCCGGCTATTGTGATAGAAGAAGCTAAAGAGAAGCTGTCAAGCATTTTTGGTTATGAGTTGAGGGAACTTCAAAGAGCACGGCCTTCATCCACTGCCCAAGGGCACCCTCCTCAACATAGTAAGAAGTGATCTAACTTATTATCTTACTCTTAATTATTACGATCGAGATCTTCAGACGTCGGTCCAACTCCCATTTATTCACGTTATCTTACTGCAATCCTAGTTATCAGAATTTTTGTAGATATGACTACTGCAAGTCACCACAGGTTTCTTTTAACAAACAGTACAGGGTTATGGTTCAGTCTTGTCATGAGTCGAAGCATACAAATTTTAAGAATGAGCTAACCTTTTGCAACTTTAGTATAGAAAAAGTGTCCAACTAATGATCTTGTCAGTGGAACAAAATGTTCTTGTGGGTGACGAGTACATAGGATGAGAAATTCATTTCTTCTAGTAATGTTATTGTCATTACTCGATCCGTGAGCTGTGCACATGCTTTATATTAAATGTGGTTCATTGATCATTTTATTACTTATGCTACACACTCCTATCTCAAGAACCATATATGTGAAATAGCACATATTCGAATTTATTCTCATCTCAGAAACTGCGTACGCCTAGGTTTTGGTTCATTCTTCAAAATAAACGTCTGATGCATCTGATATACAATCCTCTTTATTCATTGCATCGAAATAAAACAACTGGAACATGAGGGTTGGCATTTTCTTAGCATGAAAGTTGTGGCTATCGGTTGTAGAAAGTCATACTAAATTCAGTGGATGTACAGACTGCTGAATGTGGTTATTTGGTTATAAATTTTCTTAGTCGCTGAATAAGCTCTCATTTCGTCAAGAACTAGGATCTGCTGTATGCTTCATGGCTTGCCATTAATATTCTAATTTTCAGGTTACTTCCATCTGACATGGCTTACTGCAAAACTATATCGTTATTGGATCTTGCTTTAACTCTTGTCACTACATGCCTTCAGATGTTGTAGATTCAAAATCCTATGTTCTCATAAGCAAGCTTCCTGCGGAGGTTTATAGAAAGTATGTTGAGGATGTCGATACCGCACACGTGACTGGTTTTAATTTTGTTGTAGTTAGTATTGTACATCTGGCTGGAGGCAAAATTCCTGAAGGTTAGCTCTATGGCTGTAGTTTCTTAATCCAATGCATACTTGGTAGATTTAGAGTGATAGAAAGACAGCTTACACATCAAATGGATTTCATTCATAAACTTTTTCTTTCAATTGTAACTCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCGTTTCGAGCTTCTCCTCAAGGTTTTCCCGTTTTAAAAATCTTGAGGGGAAGCCCAAATGGGAAAGCCCAAAGAGGACAATATTTGTTAGCAGTGGGCTTGGGCCGTTACATTACCTGGAGAAGACGTTGCTTATCAGATAGTTATACTAAGTTTTATACCATATTAACTGACTAAAAAATATTTCAATGAGTTTCTTAGAGCAAAAGTTCCAATTTTTTTGCTTCTCTTTCATCGAATCTAGTACATTACTTCGAAAAGATGTTGCTTATCAGATAGCCATGCTACATTTATGCAATATTGATCGACTCAAAATGTTTCAAAGAGTTTCTTAGGGCAGAATGCCATTTTTTGCTTTATAATGGAACCTGGCAATACACTGCAGAAAGCCTTTGGCATCACTTGAGACGAATGGGGTTATCTGAAAGTGATGAAAAACATCCAGTCCTTGGCAACATCAAGCAGGCAGTAGAGTTGCTTGTTCAGCAAAGGTCAGTAAACTCTGTACTATATGCTTGGTAACTGCAATTGAGAAACTTCAACATAATTCGATGACCATAGAAGATACTGGAAAGACGGGTTTACAGGTTCATCTTATTCTTGCCGTGCTTTGTAGATATCTGCAGAAGGACAAAATAAATGGTCCTGAAGGGAATATCACGTTCTACGAGCTTGCTGAAAGAGCTATAGATGGACCAGTTAGTGAAAAGATTAAAGAATATGTAGCACAGGTATGCAGCTTGTCTATATGTATATATAGTATGGATGAATATGTTGTTTTTAGTATAAATAAATGATAATCTTGCAGCATAAAACCTCATAAAGTAGCTAAATTTAAACTTATTATTTGCTTACTTTGGAAGAAGATTAAATGAACACGAGGAATAAAATCCGATAATCGTATTGTCGTGCATTTTAGATTATGTGCCGAAAAATATACAGGATGTCTATCAATAATTAGTTTTGCGTAATTTCTTAAGTAGCATAAAAATTGTGCTTAATATGGATGGTTGGTTGGACGAATCAATGCTACCATGAATGATGGAGCCCATCTTCTGAAGGATTCGCTGTTTATCTGTCTGGAGTGATATCTGTCTGGTTTCTGTTGAATCTAGTTTGCTTTCAGCTTATCATTGCATGTTTCTAATAATTGTGCTTCGACAGCATCAGATCATAGCTTCACGCATTCGACTTAG TAAACAAGAAGGAGAAAAAAAGAAGAAGAAAGCGCGCTCACCGCCCCCAGGTCGAACTGCGCGGGAAGATGCCGAGCTCTTCAAACCTTGGAGGTTTCTGAAGCTTCCCTAAAATTCCGACATCACTTTCGCCGGAAGTCTCAAAGATTTCCCGTCGCTGTTTTCAGCGCTTCAATTCTCCTTTTTATCTTATCGTCGGCTTAGTCCGGGGGAGATTGTTGAGTATGGCAAGTTCAGGAGATTATCTTTCCCAGATTGACATTTCGAACGAGGAAAAGGACAAGCTCGTGGCGGAAGTTATCCGCTATATCATATTCAAAACTCATCAAAATTCTGGATGTCCCATCAAAAGGGAAGAGCTTACTCAGATCGTAACAAAAAATTATAGGAATCGAGGATTGCCGGCTATTGTGATAGAAGAAGCTAAAGAGAAGCTGTCAAGCATTTTTGGTTATGAGTTGAGGGAACTTCAAAGAGCACGGCCTTCATCCACTGCCCAAGGGCACCCTCCTCAACATAATGTTGTAGATTCAAAATCCTATGTTCTCATAAGCAAGCTTCCTGCGGAGGTTTATAGAAAGTATGTTGAGGATGTCGATACCGCACACGTGACTGGTTTTAATTTTGTTGTAGTTAGTATTGTACATCTGGCTGGAGGCAAAATTCCTGAAGAAAGCCTTTGGCATCACTTGAGACGAATGGGGTTATCTGAAAGTGATGAAAAACATCCAGTCCTTGGCAACATCAAGCAGGCAGTAGAGTTGCTTGTTCAGCAAAGATATCTGCAGAAGGACAAAATAAATGGTCCTGAAGGGAATATCACGTTCTACGAGCTTGCTGAAAGAGCTATAGATGGACCAGTTAGTGAAAAGATTAAAGAATATGTAGCACAGTTTGCTTTCAGCTTATCATTGCATGTTTCTAATAATTGTGCTTCGACAGCATCAGATCATAGCTTCACGCATTCGACTTAG ATGGCAAGTTCAGGAGATTATCTTTCCCAGATTGACATTTCGAACGAGGAAAAGGACAAGCTCGTGGCGGAAGTTATCCGCTATATCATATTCAAAACTCATCAAAATTCTGGATGTCCCATCAAAAGGGAAGAGCTTACTCAGATCGTAACAAAAAATTATAGGAATCGAGGATTGCCGGCTATTGTGATAGAAGAAGCTAAAGAGAAGCTGTCAAGCATTTTTGGTTATGAGTTGAGGGAACTTCAAAGAGCACGGCCTTCATCCACTGCCCAAGGGCACCCTCCTCAACATAATGTTGTAGATTCAAAATCCTATGTTCTCATAAGCAAGCTTCCTGCGGAGGTTTATAGAAAGTATGTTGAGGATGTCGATACCGCACACGTGACTGGTTTTAATTTTGTTGTAGTTAGTATTGTACATCTGGCTGGAGGCAAAATTCCTGAAGAAAGCCTTTGGCATCACTTGAGACGAATGGGGTTATCTGAAAGTGATGAAAAACATCCAGTCCTTGGCAACATCAAGCAGGCAGTAGAGTTGCTTGTTCAGCAAAGATATCTGCAGAAGGACAAAATAAATGGTCCTGAAGGGAATATCACGTTCTACGAGCTTGCTGAAAGAGCTATAGATGGACCAGTTAGTGAAAAGATTAAAGAATATGTAGCACAGTTTGCTTTCAGCTTATCATTGCATGTTTCTAATAATTGTGCTTCGACAGCATCAGATCATAGCTTCACGCATTCGACTTAG MASSGDYLSQIDISNEEKDKLVAEVIRYIIFKTHQNSGCPIKREELTQIVTKNYRNRGLPAIVIEEAKEKLSSIFGYELRELQRARPSSTAQGHPPQHNVVDSKSYVLISKLPAEVYRKYVEDVDTAHVTGFNFVVVSIVHLAGGKIPEESLWHHLRRMGLSESDEKHPVLGNIKQAVELLVQQRYLQKDKINGPEGNITFYELAERAIDGPVSEKIKEYVAQFAFSLSLHVSNNCASTASDHSFTHST Homology
BLAST of Cp4.1LG07g01320.1 vs. ExPASy Swiss-Prot
Match: P43361 (Melanoma-associated antigen 8 OS=Homo sapiens OX=9606 GN=MAGEA8 PE=1 SV=2) HSP 1 Score: 66.6 bits (161), Expect = 4.5e-10 Identity = 56/209 (26.79%), Postives = 101/209 (48.33%), Query Frame = 0
BLAST of Cp4.1LG07g01320.1 vs. ExPASy Swiss-Prot
Match: P43363 (Melanoma-associated antigen 10 OS=Homo sapiens OX=9606 GN=MAGEA10 PE=2 SV=2) HSP 1 Score: 64.3 bits (155), Expect = 2.2e-09 Identity = 48/185 (25.95%), Postives = 91/185 (49.19%), Query Frame = 0
BLAST of Cp4.1LG07g01320.1 vs. ExPASy Swiss-Prot
Match: P43355 (Melanoma-associated antigen 1 OS=Homo sapiens OX=9606 GN=MAGEA1 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.9e-09 Identity = 58/205 (28.29%), Postives = 100/205 (48.78%), Query Frame = 0
BLAST of Cp4.1LG07g01320.1 vs. ExPASy Swiss-Prot
Match: P43364 (Melanoma-associated antigen 11 OS=Homo sapiens OX=9606 GN=MAGEA11 PE=1 SV=2) HSP 1 Score: 48.5 bits (114), Expect = 1.3e-04 Identity = 51/205 (24.88%), Postives = 92/205 (44.88%), Query Frame = 0
BLAST of Cp4.1LG07g01320.1 vs. NCBI nr
Match: XP_023538088.1 (melanoma-associated antigen 1 [Cucurbita pepo subsp. pepo] >XP_023538089.1 melanoma-associated antigen 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 445 bits (1145), Expect = 4.66e-157 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of Cp4.1LG07g01320.1 vs. NCBI nr
Match: XP_023002674.1 (melanoma-associated antigen 1 [Cucurbita maxima] >XP_023002675.1 melanoma-associated antigen 1 [Cucurbita maxima]) HSP 1 Score: 441 bits (1134), Expect = 2.21e-155 Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of Cp4.1LG07g01320.1 vs. NCBI nr
Match: XP_022952014.1 (melanoma-associated antigen 2 [Cucurbita moschata] >XP_022952015.1 melanoma-associated antigen 2 [Cucurbita moschata]) HSP 1 Score: 439 bits (1128), Expect = 1.82e-154 Identity = 219/223 (98.21%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of Cp4.1LG07g01320.1 vs. NCBI nr
Match: KAG7020215.1 (Melanoma-associated antigen 8 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 437 bits (1125), Expect = 9.62e-154 Identity = 219/223 (98.21%), Postives = 221/223 (99.10%), Query Frame = 0
BLAST of Cp4.1LG07g01320.1 vs. NCBI nr
Match: KAG6585294.1 (Non-structural maintenance of chromosomes element 3-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 437 bits (1125), Expect = 3.16e-146 Identity = 219/223 (98.21%), Postives = 221/223 (99.10%), Query Frame = 0
BLAST of Cp4.1LG07g01320.1 vs. ExPASy TrEMBL
Match: A0A6J1KPM1 (melanoma-associated antigen 1 OS=Cucurbita maxima OX=3661 GN=LOC111496460 PE=4 SV=1) HSP 1 Score: 441 bits (1134), Expect = 1.07e-155 Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of Cp4.1LG07g01320.1 vs. ExPASy TrEMBL
Match: A0A6J1GKJ9 (melanoma-associated antigen 2 OS=Cucurbita moschata OX=3662 GN=LOC111454728 PE=4 SV=1) HSP 1 Score: 439 bits (1128), Expect = 8.79e-155 Identity = 219/223 (98.21%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of Cp4.1LG07g01320.1 vs. ExPASy TrEMBL
Match: A0A6J1BU01 (melanoma-associated antigen 1 OS=Momordica charantia OX=3673 GN=LOC111004771 PE=4 SV=1) HSP 1 Score: 412 bits (1058), Expect = 3.94e-144 Identity = 202/223 (90.58%), Postives = 214/223 (95.96%), Query Frame = 0
BLAST of Cp4.1LG07g01320.1 vs. ExPASy TrEMBL
Match: A0A1S3BBA9 (uncharacterized protein LOC103488065 OS=Cucumis melo OX=3656 GN=LOC103488065 PE=4 SV=1) HSP 1 Score: 391 bits (1005), Expect = 4.85e-136 Identity = 194/223 (87.00%), Postives = 206/223 (92.38%), Query Frame = 0
BLAST of Cp4.1LG07g01320.1 vs. ExPASy TrEMBL
Match: A0A0A0LL83 (MAGE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G368960 PE=4 SV=1) HSP 1 Score: 379 bits (973), Expect = 3.38e-131 Identity = 188/223 (84.30%), Postives = 204/223 (91.48%), Query Frame = 0
BLAST of Cp4.1LG07g01320.1 vs. TAIR 10
Match: AT1G34770.1 (CONTAINS InterPro DOMAIN/s: MAGE protein (InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104; Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). ) HSP 1 Score: 300.8 bits (769), Expect = 1.0e-81 Identity = 149/224 (66.52%), Postives = 184/224 (82.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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