Cp4.1LG06g06590.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g06590.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RAB GTPase homolog A1F
Location	Cp4.1LG06: 4137002 .. 4139389 (+)
Sequence length	1475
RNA-Seq Expression	Cp4.1LG06g06590.1
Synteny	Cp4.1LG06g06590.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGTCCATTAAGTCGAAGATGAACAATCCATTTCGGCGAAACGTTTCGAGTGATCGTCTTCAACAATTTCAAAACCTCTCTCTGATTCTTATGCCTTGGAGCTCCACCTCCTGATCCATTTCAAACCCATCGAGTTCTGTGGAAAATCAGAGAGTCATCGGATCCGGCCTGAATAAGTATGGCGGCGTATAGAACGGACGACGATTACGATTACCTCTTTAAAGTGGTTCTCATCGGTGACTCGGGTGTTGGAAAATCTAATCTCCTCTCCAGGTTTACGCGTAATGAGTTCAGTCTTGAGTCCAAATCCACAATCGGTGTCGAATTCGCCACTCGGAGTATTCGGGTTGATGAGAAGGTCGTCAAGGCTCAGATTTGGGACACCGCCGGCCAAGAAAGGTTCGTCAACCACTTCTTTTACTTCCATGATTCTGTTGGATTCTTGGCATTGTCTTGGTGTGGATCTTGATTGATTATTCTATTTTCTTTGTGTTTATTGTGATCTAATTCTATGATTTAAGATTTTGATGTTAAACCGAATTGTTGGGAAAGCCGAGAAAGTTGCATTCATAGGGCTTTTAGGTGTGTTCTTCTGTTGTTTGGGATTTGAGAATTAAGTAGCCTTTCAGATATTAATTCTCAGTGGTTGCTTGCTTGTTAAGATAGTGATCGCGCTATTTATCTGGTGCAATTGTAGTTTCCGGGATTACGTATTTAGATACCTTCAGTCTCAAGAAATTCGATACGAGTCTTGGAGTTGTGATTTGTGATCGGTAATGGGACATCACCATTTCCTAGAGAACTCTGAATTCTCTCTTTAACTAATATTCTGGATCTAACTAGAGAAGAATACTTGTGCCAAGACAAAATTTGAACTGCATTGTTATAGAAATTTTAGCTGTAGTGTTTGAATTTTGGCCGAGTTTCTTCATGGATGCCATGCCAACAATTTCTGTATAGATTTTTGCAGGGTGGTTATGTTTCATATTACCATCTGTTCATGATGATAATTTGTATCTATTTGCTGAATCATAGAAAGTTCCTCCTTACAAGTTGAAGTCGAACGTCTGACGCTCGTGCTAAAATATAGTTTACAAGGCTTGTGTTTTTGCGTAGATGGTTTGAGCCTGAACGAGTAATACTGAAGACTTAGGTTGTTGTAGAGATTTCATGATTTGAACATAAAAGACCCATAGTGAAAAAATCAATCATTTTCATTTTATTTGGTCTTACTTGTTTCATTTGTCATGGTTTATCACTAGGGTAACATATGAAACCATTGAATCATCTCTTATATGCTTCTGTTTTCCAGATACCGTGCCATCACAAGTGCATACTACCGAGGAGCCGTTGGTGCATTGCTTGTCTATGATGTCACACGACGCGTGACATTCGAAAACGTTGAGAGATGGTTGAAAGAGCTTAGGGATCACACCGATTCCAATATTGTGATAATGCTAGTCGGCAACAAGGCAGATTTGCAGCATCTGCGTGCTGTTTCAACTGATGATGCCAAGGCCTTTGCAGAGAAGGAGAACACATTCTTCATGGAGACATCTGCCCTTGAGGCTCTGAATGTCGAGAATGCTTTTACCGAGGTGCTTACCCAAATCTATCGTGTTGTCTGCAGAAAAGCACTCGAGATTGGGGAGGATCCCGCGGCGTTACCTAAAGGACAAACCATTAACGTCGGAAATAGGGATGATGTTTCTGCAGTGAAGAAGGTTGGTTGCTGCTCTTCATGATATCATCATATGAATATGAGGTACATCATCAAACGAGTAGAAGGATGAGTACATTATGCTATGTCTTGAATTTCGACTCCTGGTCATTTTTTATGGTGCTGGGGAGCTTCTGGGAGGGTTGGATTCATGTTTGGAGTGTTTTGAAATTGACACCAGTTCTTATTGTCAATTCCTTGTAGTTTCTTGTCCGAGCTCACTCTTTTATATTGTTTTAATTTTTGGCTCATAGTTTTGATTGTATCACAGATTGTTCTAGATAGAGAGATCTGTTAAACTGAAGTTGTATCTAAGTAAATGTTCAGTTCAATGGGGGCAGAATTCTTTAGTTTCTCCAAATTTGCTTGTTATGCCAGGAGGAACTTTTATTCCTCCACAGACTTTGCTTGTAAGCTCTCTCTTCCTCACAACCAAACGTATCCGGTGATATAAACTTGAAGGAAGATGTGAAAAAATTGTTGGGATTTTCATTTTGAAGCCATCTAAAGTCGTGTCTTTGTAAAAGAGACTTGAAAAATTTAGTAAAAAATATTTGTGCTCTCTTTTACTCGAGGGTTAAGTTTTTTTTTGTAATTTTATATGGTTTAGGTTGCATGTTTAGGATCATTCAAACTTGACATGATTCAATCTTGTTTGTGAGTGATT

mRNA sequence

CAAGTCCATTAAGTCGAAGATGAACAATCCATTTCGGCGAAACGTTTCGAGTGATCGTCTTCAACAATTTCAAAACCTCTCTCTGATTCTTATGCCTTGGAGCTCCACCTCCTGATCCATTTCAAACCCATCGAGTTCTGTGGAAAATCAGAGAGTCATCGGATCCGGCCTGAATAAGTATGGCGGCGTATAGAACGGACGACGATTACGATTACCTCTTTAAAGTGGTTCTCATCGGTGACTCGGGTGTTGGAAAATCTAATCTCCTCTCCAGGTTTACGCGTAATGAGTTCAGTCTTGAGTCCAAATCCACAATCGGTGTCGAATTCGCCACTCGGAGTATTCGGGTTGATGAGAAGGTCGTCAAGGCTCAGATTTGGGACACCGCCGGCCAAGAAAGATACCGTGCCATCACAAGTGCATACTACCGAGGAGCCGTTGGTGCATTGCTTGTCTATGATGTCACACGACGCGTGACATTCGAAAACGTTGAGAGATGGTTGAAAGAGCTTAGGGATCACACCGATTCCAATATTGTGATAATGCTAGTCGGCAACAAGGCAGATTTGCAGCATCTGCGTGCTGTTTCAACTGATGATGCCAAGGCCTTTGCAGAGAAGGAGAACACATTCTTCATGGAGACATCTGCCCTTGAGGCTCTGAATGTCGAGAATGCTTTTACCGAGGTGCTTACCCAAATCTATCGTGTTGTCTGCAGAAAAGCACTCGAGATTGGGGAGGATCCCGCGGCGTTACCTAAAGGACAAACCATTAACGTCGGAAATAGGGATGATGTTTCTGCAGTGAAGAAGGTTGGTTGCTGCTCTTCATGATATCATCATATGAATATGAGGTACATCATCAAACGAGTAGAAGGATGAGTACATTATGCTATGTCTTGAATTTCGACTCCTGGTCATTTTTTATGGTGCTGGGGAGCTTCTGGGAGGGTTGGATTCATGTTTGGAGTGTTTTGAAATTGACACCAGTTCTTATTGTCAATTCCTTGTAGTTTCTTGTCCGAGCTCACTCTTTTATATTGTTTTAATTTTTGGCTCATAGTTTTGATTGTATCACAGATTGTTCTAGATAGAGAGATCTGTTAAACTGAAGTTGTATCTAAGTAAATGTTCAGTTCAATGGGGGCAGAATTCTTTAGTTTCTCCAAATTTGCTTGTTATGCCAGGAGGAACTTTTATTCCTCCACAGACTTTGCTTGTAAGCTCTCTCTTCCTCACAACCAAACGTATCCGGTGATATAAACTTGAAGGAAGATGTGAAAAAATTGTTGGGATTTTCATTTTGAAGCCATCTAAAGTCGTGTCTTTGTAAAAGAGACTTGAAAAATTTAGTAAAAAATATTTGTGCTCTCTTTTACTCGAGGGTTAAGTTTTTTTTTGTAATTTTATATGGTTTAGGTTGCATGTTTAGGATCATTCAAACTTGACATGATTCAATCTTGTTTGTGAGTGATT

Coding sequence (CDS)

ATGGCGGCGTATAGAACGGACGACGATTACGATTACCTCTTTAAAGTGGTTCTCATCGGTGACTCGGGTGTTGGAAAATCTAATCTCCTCTCCAGGTTTACGCGTAATGAGTTCAGTCTTGAGTCCAAATCCACAATCGGTGTCGAATTCGCCACTCGGAGTATTCGGGTTGATGAGAAGGTCGTCAAGGCTCAGATTTGGGACACCGCCGGCCAAGAAAGATACCGTGCCATCACAAGTGCATACTACCGAGGAGCCGTTGGTGCATTGCTTGTCTATGATGTCACACGACGCGTGACATTCGAAAACGTTGAGAGATGGTTGAAAGAGCTTAGGGATCACACCGATTCCAATATTGTGATAATGCTAGTCGGCAACAAGGCAGATTTGCAGCATCTGCGTGCTGTTTCAACTGATGATGCCAAGGCCTTTGCAGAGAAGGAGAACACATTCTTCATGGAGACATCTGCCCTTGAGGCTCTGAATGTCGAGAATGCTTTTACCGAGGTGCTTACCCAAATCTATCGTGTTGTCTGCAGAAAAGCACTCGAGATTGGGGAGGATCCCGCGGCGTTACCTAAAGGACAAACCATTAACGTCGGAAATAGGGATGATGTTTCTGCAGTGAAGAAGGTTGGTTGCTGCTCTTCATGA

Protein sequence

MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIVIMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCRKALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS

Homology

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BLAST of Cp4.1LG06g06590.1 vs. ExPASy Swiss-Prot
Match: Q9FJH0 (Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 1.3e-109
Identity = 197/217 (90.78%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           MAAYR DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VD+K
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR VTFENVERWLKELRDHTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IM VGNKADL+HLRAVST+DAKAFAE+ENTFFMETSALE++NVENAFTEVL+QIYRVV R
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 218
           KAL+IG+DPAALPKGQTINVG++DDVSAVKKVGCCS+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSN 217

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BLAST of Cp4.1LG06g06590.1 vs. ExPASy Swiss-Prot
Match: Q40521 (Ras-related protein Rab11B OS=Nicotiana tabacum OX=4097 GN=RAB11B PE=2 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.5e-107
Identity = 193/214 (90.19%), Postives = 210/214 (98.13%), Query Frame = 0


Query: 4   YRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEKVVK 63
           YR +DDYDYLFK+VLIGDSGVGKSNLLSRF+RNEF+LESKSTIGVEFATRSIRVD+K+VK
Sbjct: 5   YRAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVK 64

Query: 64  AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIVIML 123
           AQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TR VTFENVERWLKELRDHTD NIVIML
Sbjct: 65  AQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIML 124

Query: 124 VGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCRKAL 183
           VGNKADL+HLRAVST+DAKAFAE+ENTFFMETSALE+LNVENAFTEVLT+IY+VVCRKAL
Sbjct: 125 VGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKAL 184

Query: 184 EIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 218
           E+G+DPAALPKGQTINVG +DDVSAVKKVGCCSS
Sbjct: 185 EVGDDPAALPKGQTINVG-KDDVSAVKKVGCCSS 217

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BLAST of Cp4.1LG06g06590.1 vs. ExPASy Swiss-Prot
Match: Q9LK99 (Ras-related protein RABA1g OS=Arabidopsis thaliana OX=3702 GN=RABA1G PE=2 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 9.9e-107
Identity = 193/217 (88.94%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           MAAYR DDDYD+L+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VDEK
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR VTFENVERWLKELRDHT++NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL+HLRAVST+DAKAFAE+ENTFFMETSALEALNVENAFTEVL+QIYRV  +
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 218
           KAL+IG+D   LPKGQ+INVG++DDVS VKKVGCCSS
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

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BLAST of Cp4.1LG06g06590.1 vs. ExPASy Swiss-Prot
Match: Q9S810 (Ras-related protein RABA1i OS=Arabidopsis thaliana OX=3702 GN=RABA1I PE=2 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 1.9e-102
Identity = 185/218 (84.86%), Postives = 205/218 (94.04%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           M AYR +DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S++TIGVEFATRSI+ D+K
Sbjct: 1   MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR VTFENVERWLKELRDHTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL+HLRA+ST++AKAFAE+ENTFFMETSALEA+NV+NAFTEVLTQIYRVV +
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180

Query: 181 KALEIGEDP-AALPKGQTINVGNRDDVSAVKKVGCCSS 218
           KALE G+DP  ALPKGQ INVG RDD+SAVKK GCCS+
Sbjct: 181 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 218

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BLAST of Cp4.1LG06g06590.1 vs. ExPASy Swiss-Prot
Match: Q1PEX3 (Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.1e-100
Identity = 182/218 (83.49%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           M  Y+ +DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S+STIGVEFATRSI+VD+K
Sbjct: 1   MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR VTFENVERWLKELRDHTD+N V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL HLRA+ST++ K FAE+ENTFFMETSALEA+NVENAFTEVLTQIYRVV +
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180

Query: 181 KALEIGEDP-AALPKGQTINVGNRDDVSAVKKVGCCSS 218
           KAL+ G+DP  ALPKGQ INVG+RDDVSAVKK GCC++
Sbjct: 181 KALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCAT 218

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BLAST of Cp4.1LG06g06590.1 vs. NCBI nr
Match: XP_022935729.1 (ras-related protein RABA1f-like [Cucurbita moschata] >XP_023534857.1 ras-related protein RABA1f [Cucurbita pepo subsp. pepo])

HSP 1 Score: 428 bits (1100), Expect = 5.00e-151
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 217
           KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 217

[Close]

BLAST of Cp4.1LG06g06590.1 vs. NCBI nr
Match: KAG6591929.1 (Ras-related protein RABA1f, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024802.1 Ras-related protein RABA1f, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 427 bits (1098), Expect = 1.01e-150
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 217
           KALEIGEDPAA+PKGQTINVGNRDDVSAVKKVGCCSS
Sbjct: 181 KALEIGEDPAAIPKGQTINVGNRDDVSAVKKVGCCSS 217

[Close]

BLAST of Cp4.1LG06g06590.1 vs. NCBI nr
Match: XP_022976577.1 (ras-related protein RABA1f-like [Cucurbita maxima])

HSP 1 Score: 426 bits (1095), Expect = 2.89e-150
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLQHLRAVSTDDAKAFAEKE+TFFMETSALEALNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKESTFFMETSALEALNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 217
           KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 217

[Close]

BLAST of Cp4.1LG06g06590.1 vs. NCBI nr
Match: XP_038897555.1 (ras-related protein RABA1f [Benincasa hispida])

HSP 1 Score: 419 bits (1077), Expect = 1.61e-147
Identity = 210/217 (96.77%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVD+K
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR VTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL+HLRAVST+DAKAFAEKENTFFMETSALE+LNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 217
           KALEIGEDPAALPKGQTINVGN+DDVSAVKKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAVKKVGCCSS 217

[Close]

BLAST of Cp4.1LG06g06590.1 vs. NCBI nr
Match: XP_004146038.1 (ras-related protein RABA1f [Cucumis sativus] >XP_008463712.1 PREDICTED: ras-related protein RABA1f [Cucumis melo] >ADN33802.1 GTP-binding protein [Cucumis melo subsp. melo] >KAA0066790.1 ras-related protein RABA1f [Cucumis melo var. makuwa] >KGN55093.1 hypothetical protein Csa_012062 [Cucumis sativus] >TYK27937.1 ras-related protein RABA1f [Cucumis melo var. makuwa])

HSP 1 Score: 416 bits (1070), Expect = 1.88e-146
Identity = 208/217 (95.85%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVD+K
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR VTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL+HLRAVST+DA+AFAEKENTFFMETSALE+LNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 217
           KALEIGEDPAALPKGQTINVGN+DDVSA+KKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217

[Close]

BLAST of Cp4.1LG06g06590.1 vs. ExPASy TrEMBL
Match: A0A6J1F689 (ras-related protein RABA1f-like OS=Cucurbita moschata OX=3662 GN=LOC111442552 PE=4 SV=1)

HSP 1 Score: 428 bits (1100), Expect = 2.42e-151
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 217
           KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 217

[Close]

BLAST of Cp4.1LG06g06590.1 vs. ExPASy TrEMBL
Match: A0A6J1IG47 (ras-related protein RABA1f-like OS=Cucurbita maxima OX=3661 GN=LOC111476930 PE=4 SV=1)

HSP 1 Score: 426 bits (1095), Expect = 1.40e-150
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLQHLRAVSTDDAKAFAEKE+TFFMETSALEALNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKESTFFMETSALEALNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 217
           KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 217

[Close]

BLAST of Cp4.1LG06g06590.1 vs. ExPASy TrEMBL
Match: A0A5D3DVT8 (Ras-related protein RABA1f OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001250 PE=4 SV=1)

HSP 1 Score: 416 bits (1070), Expect = 9.08e-147
Identity = 208/217 (95.85%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVD+K
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR VTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL+HLRAVST+DA+AFAEKENTFFMETSALE+LNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 217
           KALEIGEDPAALPKGQTINVGN+DDVSA+KKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217

[Close]

BLAST of Cp4.1LG06g06590.1 vs. ExPASy TrEMBL
Match: E5GBG0 (GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 416 bits (1070), Expect = 9.08e-147
Identity = 208/217 (95.85%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVD+K
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR VTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL+HLRAVST+DA+AFAEKENTFFMETSALE+LNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 217
           KALEIGEDPAALPKGQTINVGN+DDVSA+KKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217

[Close]

BLAST of Cp4.1LG06g06590.1 vs. ExPASy TrEMBL
Match: A0A0A0L041 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628900 PE=4 SV=1)

HSP 1 Score: 416 bits (1070), Expect = 9.08e-147
Identity = 208/217 (95.85%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVD+K
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR VTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL+HLRAVST+DA+AFAEKENTFFMETSALE+LNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 217
           KALEIGEDPAALPKGQTINVGN+DDVSA+KKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217

[Close]

BLAST of Cp4.1LG06g06590.1 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 397.1 bits (1019), Expect = 8.9e-111
Identity = 197/217 (90.78%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           MAAYR DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VD+K
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR VTFENVERWLKELRDHTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IM VGNKADL+HLRAVST+DAKAFAE+ENTFFMETSALE++NVENAFTEVL+QIYRVV R
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 218
           KAL+IG+DPAALPKGQTINVG++DDVSAVKKVGCCS+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of Cp4.1LG06g06590.1 vs. TAIR 10
Match: AT3G15060.1 (RAB GTPase homolog A1G )

HSP 1 Score: 387.5 bits (994), Expect = 7.1e-108
Identity = 193/217 (88.94%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           MAAYR DDDYD+L+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VDEK
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR VTFENVERWLKELRDHT++NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL+HLRAVST+DAKAFAE+ENTFFMETSALEALNVENAFTEVL+QIYRV  +
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCSS 218
           KAL+IG+D   LPKGQ+INVG++DDVS VKKVGCCSS
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

[Close]

BLAST of Cp4.1LG06g06590.1 vs. TAIR 10
Match: AT1G28550.1 (RAB GTPase homolog A1I )

HSP 1 Score: 373.2 bits (957), Expect = 1.4e-103
Identity = 185/218 (84.86%), Postives = 205/218 (94.04%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           M AYR +DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S++TIGVEFATRSI+ D+K
Sbjct: 1   MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR VTFENVERWLKELRDHTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL+HLRA+ST++AKAFAE+ENTFFMETSALEA+NV+NAFTEVLTQIYRVV +
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180

Query: 181 KALEIGEDP-AALPKGQTINVGNRDDVSAVKKVGCCSS 218
           KALE G+DP  ALPKGQ INVG RDD+SAVKK GCCS+
Sbjct: 181 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 218

[Close]

BLAST of Cp4.1LG06g06590.1 vs. TAIR 10
Match: AT2G33870.1 (RAB GTPase homolog A1H )

HSP 1 Score: 367.5 bits (942), Expect = 7.6e-102
Identity = 182/218 (83.49%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           M  Y+ +DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S+STIGVEFATRSI+VD+K
Sbjct: 1   MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR VTFENVERWLKELRDHTD+N V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL HLRA+ST++ K FAE+ENTFFMETSALEA+NVENAFTEVLTQIYRVV +
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180

Query: 181 KALEIGEDP-AALPKGQTINVGNRDDVSAVKKVGCCSS 218
           KAL+ G+DP  ALPKGQ INVG+RDDVSAVKK GCC++
Sbjct: 181 KALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCAT 218

[Close]

BLAST of Cp4.1LG06g06590.1 vs. TAIR 10
Match: AT4G18430.1 (RAB GTPase homolog A1E )

HSP 1 Score: 364.0 bits (933), Expect = 8.4e-101
Identity = 175/216 (81.02%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDEK 60
           M AYR DDDYDYLFK+VLIGDSGVGKSNLLSRFTRNEFS+ESKSTIGVEFATRS+ VDEK
Sbjct: 1   MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEK 60

Query: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRVTFENVERWLKELRDHTDSNIV 120
           ++KAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+TR +TFENVERWLKELRDHTD+N+V
Sbjct: 61  IIKAQLWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVV 120

Query: 121 IMLVGNKADLQHLRAVSTDDAKAFAEKENTFFMETSALEALNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL+HLRAV T++A++F+E+EN FFMETSAL+A NVE AFT VLTQIYRV+ R
Sbjct: 121 IMLVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNRDDVSAVKKVGCCS 217
           KAL+   DP +LPKGQTI++GN+DDV+AVK  GCCS
Sbjct: 181 KALDGTGDPMSLPKGQTIDIGNKDDVTAVKSSGCCS 216

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g06590.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJH0	1.3e-109	90.78	Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1	[more]
Q40521	1.5e-107	90.19	Ras-related protein Rab11B OS=Nicotiana tabacum OX=4097 GN=RAB11B PE=2 SV=1	[more]
Q9LK99	9.9e-107	88.94	Ras-related protein RABA1g OS=Arabidopsis thaliana OX=3702 GN=RABA1G PE=2 SV=1	[more]
Q9S810	1.9e-102	84.86	Ras-related protein RABA1i OS=Arabidopsis thaliana OX=3702 GN=RABA1I PE=2 SV=1	[more]
Q1PEX3	1.1e-100	83.49	Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1	[more]

BLAST of Cp4.1LG06g06590.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935729.1	5.00e-151	100.00	ras-related protein RABA1f-like [Cucurbita moschata] >XP_023534857.1 ras-related...	[more]
KAG6591929.1	1.01e-150	99.54	Ras-related protein RABA1f, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_022976577.1	2.89e-150	99.54	ras-related protein RABA1f-like [Cucurbita maxima]	[more]
XP_038897555.1	1.61e-147	96.77	ras-related protein RABA1f [Benincasa hispida]	[more]
XP_004146038.1	1.88e-146	95.85	ras-related protein RABA1f [Cucumis sativus] >XP_008463712.1 PREDICTED: ras-rela...	[more]

BLAST of Cp4.1LG06g06590.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F689	2.42e-151	100.00	ras-related protein RABA1f-like OS=Cucurbita moschata OX=3662 GN=LOC111442552 PE...	[more]
A0A6J1IG47	1.40e-150	99.54	ras-related protein RABA1f-like OS=Cucurbita maxima OX=3661 GN=LOC111476930 PE=4...	[more]
A0A5D3DVT8	9.08e-147	95.85	Ras-related protein RABA1f OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
E5GBG0	9.08e-147	95.85	GTP-binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0L041	9.08e-147	95.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628900 PE=4 SV=1	[more]

BLAST of Cp4.1LG06g06590.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60860.1	8.9e-111	90.78	RAB GTPase homolog A1F	[more]
AT3G15060.1	7.1e-108	88.94	RAB GTPase homolog A1G	[more]
AT1G28550.1	1.4e-103	84.86	RAB GTPase homolog A1I	[more]
AT2G33870.1	7.6e-102	83.49	RAB GTPase homolog A1H	[more]
AT4G18430.1	8.4e-101	81.02	RAB GTPase homolog A1E	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 14..35 score: 55.2 coord: 55..77 score: 53.02 coord: 117..130 score: 55.15 coord: 37..53 score: 36.77 coord: 152..174 score: 41.33
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 5.1E-113 score: 391.4
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..216 e-value: 7.9E-11 score: 52.0
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 5.6E-31 score: 118.9
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..215
None	No IPR available	PANTHER	PTHR47979:SF21	RAS-RELATED PROTEIN RABA1F-LIKE	coord: 1..215
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..215 score: 35.901081
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..179 score: 9.716774
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 1.39385E-130 score: 362.648
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 1.6E-11 score: 28.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 9.9E-63 score: 210.6
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..217 score: 17.405142
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..215 e-value: 1.3E-71 score: 242.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..180
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 1.9E-39 score: 133.0

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG06g06590	Cp4.1LG06g06590	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG06g06590.1:five_prime_utr:001	Cp4.1LG06g06590.1:five_prime_utr:001	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG06g06590.1:exon:001	Cp4.1LG06g06590.1:exon:001	exon
Cp4.1LG06g06590.1:exon:002	Cp4.1LG06g06590.1:exon:002	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG06g06590.1:cds:001	Cp4.1LG06g06590.1:cds:001	CDS
Cp4.1LG06g06590.1:cds:002	Cp4.1LG06g06590.1:cds:002	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG06g06590.1:three_prime_utr:001	Cp4.1LG06g06590.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG06g06590.1	Cp4.1LG06g06590.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding