Cp4.1LG06g02310.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g02310.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	NDR1/HIN1-like protein 6
Location	Cp4.1LG06: 1281045 .. 1281836 (+)
Sequence length	792
RNA-Seq Expression	Cp4.1LG06g02310.1
Synteny	Cp4.1LG06g02310.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAACGGCGCCCACCCTCCCCCCAAACCGGCCGTCAATGGCTCCGCCGCCCCACCTGCCGCCAACGGCACCGCACCGGCTTCCGGTGGGAAACCACAGTTCCGTCAACAGCCCTACCGTCCCCCTCCATACCGACACCACCGCAATCACCACCGGAGCCGTCGCAATCTCTGCTGCTGCTTCTGCTTTTGGACCATCATCATCGTCCTAGGGCTCGCTCTTTTAGCCGCCATTGCCGGCGCTGCCCTCTACGTCCTGTACCGCCCTCACCGCCCTCAATTCACAATCTCCTCCCTCCGAATTTCAAAGCTCAATCTCACCACCGCCGCCGATTCCTCCGCCTCTCACGTCTCATCCCTCTTCAATCTCACCCTCTCATCCTTCAACCCTAATTCCCACATCACCTTCGCCTACGACCCCTTCACTCTCTCCTGCTTCTCCAATTCCGTCCTCCTCGCCAATGGCTCGATCCCGGCTTTCACCAGCGCCACAAAGAACCAAACGGTATTCCGATCCTTAATGTCCGGCGCCGAAGATCTGGACGCAGATTCCGTTACGAGCCTCAGATCGGATCTGAAGAAGAAAGGAGGCGCCCCTCTGACGATCGAGATGGATACGAAAGTGAAGGTGAAAATCGGAGGAGTGAACAGCAAAAAGGTCGGAATCAGAGTGACATGTGAAGGAATTAAAGGAACACCGCCGAAGGGGAAACAGCCGACGGTAGCCCCCGTCTCCGACGCCGATTGCAAGGTTGATCTCCGAATCAAGATCTGGATATTCACTCTCTAA

mRNA sequence

ATGCAGAACGGCGCCCACCCTCCCCCCAAACCGGCCGTCAATGGCTCCGCCGCCCCACCTGCCGCCAACGGCACCGCACCGGCTTCCGGTGGGAAACCACAGTTCCGTCAACAGCCCTACCGTCCCCCTCCATACCGACACCACCGCAATCACCACCGGAGCCGTCGCAATCTCTGCTGCTGCTTCTGCTTTTGGACCATCATCATCGTCCTAGGGCTCGCTCTTTTAGCCGCCATTGCCGGCGCTGCCCTCTACGTCCTGTACCGCCCTCACCGCCCTCAATTCACAATCTCCTCCCTCCGAATTTCAAAGCTCAATCTCACCACCGCCGCCGATTCCTCCGCCTCTCACGTCTCATCCCTCTTCAATCTCACCCTCTCATCCTTCAACCCTAATTCCCACATCACCTTCGCCTACGACCCCTTCACTCTCTCCTGCTTCTCCAATTCCGTCCTCCTCGCCAATGGCTCGATCCCGGCTTTCACCAGCGCCACAAAGAACCAAACGGTATTCCGATCCTTAATGTCCGGCGCCGAAGATCTGGACGCAGATTCCGTTACGAGCCTCAGATCGGATCTGAAGAAGAAAGGAGGCGCCCCTCTGACGATCGAGATGGATACGAAAGTGAAGGTGAAAATCGGAGGAGTGAACAGCAAAAAGGTCGGAATCAGAGTGACATGTGAAGGAATTAAAGGAACACCGCCGAAGGGGAAACAGCCGACGGTAGCCCCCGTCTCCGACGCCGATTGCAAGGTTGATCTCCGAATCAAGATCTGGATATTCACTCTCTAA

Coding sequence (CDS)

ATGCAGAACGGCGCCCACCCTCCCCCCAAACCGGCCGTCAATGGCTCCGCCGCCCCACCTGCCGCCAACGGCACCGCACCGGCTTCCGGTGGGAAACCACAGTTCCGTCAACAGCCCTACCGTCCCCCTCCATACCGACACCACCGCAATCACCACCGGAGCCGTCGCAATCTCTGCTGCTGCTTCTGCTTTTGGACCATCATCATCGTCCTAGGGCTCGCTCTTTTAGCCGCCATTGCCGGCGCTGCCCTCTACGTCCTGTACCGCCCTCACCGCCCTCAATTCACAATCTCCTCCCTCCGAATTTCAAAGCTCAATCTCACCACCGCCGCCGATTCCTCCGCCTCTCACGTCTCATCCCTCTTCAATCTCACCCTCTCATCCTTCAACCCTAATTCCCACATCACCTTCGCCTACGACCCCTTCACTCTCTCCTGCTTCTCCAATTCCGTCCTCCTCGCCAATGGCTCGATCCCGGCTTTCACCAGCGCCACAAAGAACCAAACGGTATTCCGATCCTTAATGTCCGGCGCCGAAGATCTGGACGCAGATTCCGTTACGAGCCTCAGATCGGATCTGAAGAAGAAAGGAGGCGCCCCTCTGACGATCGAGATGGATACGAAAGTGAAGGTGAAAATCGGAGGAGTGAACAGCAAAAAGGTCGGAATCAGAGTGACATGTGAAGGAATTAAAGGAACACCGCCGAAGGGGAAACAGCCGACGGTAGCCCCCGTCTCCGACGCCGATTGCAAGGTTGATCTCCGAATCAAGATCTGGATATTCACTCTCTAA

Protein sequence

MQNGAHPPPKPAVNGSAAPPAANGTAPASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCCCFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQPTVAPVSDADCKVDLRIKIWIFTL

Homology

[Close]

BLAST of Cp4.1LG06g02310.1 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.1e-14
Identity = 72/243 (29.63%), Postives = 120/243 (49.38%), Query Frame = 0


Query: 1   MQNGAHPPPKPAVNGSAAPPAANGTAPASGGKPQF-------RQQPYR-PPPYRHHRNHH 60
           M    +P   P  +G  +   ++G  P     P         + Q YR PPP   HR   
Sbjct: 1   MAERVYPADSPPQSGQFSGNFSSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQ 60

Query: 61  RSRR-----NLCCCFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNL 120
            SR+     N  CCFC +   + + L +LA I+ A LY++YRP  P+++I    +S +NL
Sbjct: 61  LSRKKTNRSNCRCCFCSFLAAVFI-LIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINL 120

Query: 121 TTAADSSASHVSSLFNLTLSSFNPNSHITFAYD-PFTLSCFSNSVLLANGSIPAFTSATK 180
                +S S +S  FN+T+ S N N  I   Y+   ++  + N V ++NG +P F    K
Sbjct: 121 -----NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAK 180

Query: 181 NQTVFRSLMSGAE-DLDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRV 229
           N TV + ++SG++  L +     +R+++ KK   P  +++   VK+K G V +  + + V
Sbjct: 181 NVTVVKLVLSGSKIQLTSGMRKEMRNEVSKK-TVPFKLKIKAPVKIKFGSVKTWTMIVNV 236

[Close]

BLAST of Cp4.1LG06g02310.1 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.2e-10
Identity = 67/250 (26.80%), Postives = 112/250 (44.80%), Query Frame = 0


Query: 9   PKPAVNGSAAPPAANGTAPASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCCCFCF-WTI 68
           P+ A     AP    G++ +  G P   + P    P R        +R  CCC CF +T 
Sbjct: 13  PEAATARPTAPLVPRGSSRSEHGDPS--KVPLNQRPQRFVPLAPPKKRRSCCCRCFCYTF 72

Query: 69  IIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTLS 128
             +L L +    +   LY++++P  P ++     I +L LT  A +  S +++ FN+T++
Sbjct: 73  CFLLLLVVAVGASIGILYLVFKPKLPDYS-----IDRLQLTRFALNQDSSLTTAFNVTIT 132

Query: 129 SFNPNSHITFAY-DPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSV 188
           + NPN  I   Y D   ++ +     L+NGS+P F    +N TV    M+G     +   
Sbjct: 133 AKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQNASGLR 192

Query: 189 TSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQPTVAPVS 248
           T+L    ++ G  PL I ++  V+VK G +   +V   V C     +        V  + 
Sbjct: 193 TTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLATN---NVIKIQ 252

Query: 249 DADCKVDLRI 257
            + CK  LR+
Sbjct: 253 SSSCKFRLRL 252

[Close]

BLAST of Cp4.1LG06g02310.1 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.0e-04
Identity = 44/172 (25.58%), Postives = 75/172 (43.60%), Query Frame = 0


Query: 84  LYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTLSSFNPNSHITFAYDPFT 143
           ++++  P RP+F+++   I  LNLTT   SS   ++S   LTL S NPN  +   YD   
Sbjct: 45  VWLILHPERPEFSLTEADIYSLNLTT---SSTHLLNSSVQLTLFSKNPNKKVGIYYDKLL 104

Query: 144 L-SCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSVTSLRSDLKKKGGAPLT 203
           + + +    + +  S+P F  + +   +  + + G E   A S     S  +  G   + 
Sbjct: 105 VYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKIIIG 164

Query: 204 IEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQPTVAPVSDADCKVDL 255
           ++MD K++ KIG   S      V C  I         P +A +    C   +
Sbjct: 165 MKMDGKLRWKIGTWVSGAYRFNVNCLAIVAFGMNMTTPPLASLQGTRCSTTI 213

[Close]

BLAST of Cp4.1LG06g02310.1 vs. NCBI nr
Match: XP_023535537.1 (NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 513 bits (1322), Expect = 2.46e-183
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MQNGAHPPPKPAVNGSAAPPAANGTAPASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCC 60
           MQNGAHPPPKPAVNGSAAPPAANGTAPASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCC
Sbjct: 1   MQNGAHPPPKPAVNGSAAPPAANGTAPASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCC 60

Query: 61  CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS 120
           CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS
Sbjct: 61  CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS 120

Query: 121 LFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED 180
           LFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED
Sbjct: 121 LFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED 180

Query: 181 LDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP 240
           LDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP
Sbjct: 181 LDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP 240

Query: 241 TVAPVSDADCKVDLRIKIWIFTL 263
           TVAPVSDADCKVDLRIKIWIFTL
Sbjct: 241 TVAPVSDADCKVDLRIKIWIFTL 263

[Close]

BLAST of Cp4.1LG06g02310.1 vs. NCBI nr
Match: KAG6591466.1 (NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024346.1 NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 506 bits (1302), Expect = 2.76e-180
Identity = 260/263 (98.86%), Postives = 260/263 (98.86%), Query Frame = 0


Query: 1   MQNGAHPPPKPAVNGSAAPPAANGTAPASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCC 60
           MQNGAHPPPKPAVNGSAAPP ANGTA ASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCC
Sbjct: 1   MQNGAHPPPKPAVNGSAAPPTANGTAQASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCC 60

Query: 61  CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS 120
           CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS
Sbjct: 61  CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS 120

Query: 121 LFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED 180
           LFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED
Sbjct: 121 LFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED 180

Query: 181 LDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP 240
           LDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP
Sbjct: 181 LDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP 240

Query: 241 TVAPVSDADCKVDLRIKIWIFTL 263
           TVA VSDADCKVDLRIKIWIFTL
Sbjct: 241 TVASVSDADCKVDLRIKIWIFTL 263

[Close]

BLAST of Cp4.1LG06g02310.1 vs. NCBI nr
Match: XP_022936399.1 (NDR1/HIN1-like protein 6 [Cucurbita moschata] >XP_022936400.1 NDR1/HIN1-like protein 6 [Cucurbita moschata])

HSP 1 Score: 504 bits (1299), Expect = 7.90e-180
Identity = 259/263 (98.48%), Postives = 259/263 (98.48%), Query Frame = 0


Query: 1   MQNGAHPPPKPAVNGSAAPPAANGTAPASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCC 60
           MQNGAHPPPKPAVNGSAAPP ANGTAPASGGKPQFRQQPYRPPPYRHH NHHRSRRNLCC
Sbjct: 1   MQNGAHPPPKPAVNGSAAPPTANGTAPASGGKPQFRQQPYRPPPYRHHSNHHRSRRNLCC 60

Query: 61  CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS 120
           CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS
Sbjct: 61  CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS 120

Query: 121 LFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED 180
           LFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED
Sbjct: 121 LFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED 180

Query: 181 LDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP 240
           LDADS TSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP
Sbjct: 181 LDADSFTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP 240

Query: 241 TVAPVSDADCKVDLRIKIWIFTL 263
           TVA VSDADCKVDLRIKIWIFTL
Sbjct: 241 TVASVSDADCKVDLRIKIWIFTL 263

[Close]

BLAST of Cp4.1LG06g02310.1 vs. NCBI nr
Match: XP_022977096.1 (NDR1/HIN1-like protein 6 [Cucurbita maxima])

HSP 1 Score: 503 bits (1295), Expect = 3.22e-179
Identity = 258/263 (98.10%), Postives = 259/263 (98.48%), Query Frame = 0


Query: 1   MQNGAHPPPKPAVNGSAAPPAANGTAPASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCC 60
           MQNGAHPPPKPAVNGSAAPP  NGTAPASGGKPQFRQQPYRPPPYRH RNHHRSRRNLCC
Sbjct: 1   MQNGAHPPPKPAVNGSAAPPTVNGTAPASGGKPQFRQQPYRPPPYRHRRNHHRSRRNLCC 60

Query: 61  CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS 120
           CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS
Sbjct: 61  CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS 120

Query: 121 LFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED 180
           LFNLTLSSFNPNSHIT+AYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED
Sbjct: 121 LFNLTLSSFNPNSHITYAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED 180

Query: 181 LDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP 240
           LDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP
Sbjct: 181 LDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP 240

Query: 241 TVAPVSDADCKVDLRIKIWIFTL 263
           TVA VSDADCKVDLRIKIWIFTL
Sbjct: 241 TVASVSDADCKVDLRIKIWIFTL 263

[Close]

BLAST of Cp4.1LG06g02310.1 vs. NCBI nr
Match: XP_038898818.1 (NDR1/HIN1-like protein 6 [Benincasa hispida])

HSP 1 Score: 441 bits (1135), Expect = 7.50e-155
Identity = 229/257 (89.11%), Postives = 239/257 (93.00%), Query Frame = 0


Query: 9   PKPAVNGSAA--PPAANGTAPASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCCCFCFWT 68
           PKP+VNG+AA  PPA NGT P S  KPQFRQQPYRPPPYR+HRNHHRSRRNLCCCFCFWT
Sbjct: 6   PKPSVNGAAAAPPPATNGTIPPSSAKPQFRQQPYRPPPYRNHRNHHRSRRNLCCCFCFWT 65

Query: 69  IIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTL 128
           IIIVLGL LLAAIAGAALYVLYRPHRPQFTISSLRIS LNLTT A+SSASH+SSLFNLTL
Sbjct: 66  IIIVLGLILLAAIAGAALYVLYRPHRPQFTISSLRISNLNLTTNAESSASHLSSLFNLTL 125

Query: 129 SSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSV 188
           SSFNPNSHITF+YDPFTLS F+NSVLLANGSIPAFTS TKNQTVFR+LMSGAEDLDADSV
Sbjct: 126 SSFNPNSHITFSYDPFTLSTFANSVLLANGSIPAFTSGTKNQTVFRALMSGAEDLDADSV 185

Query: 189 TSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQPTVAPVS 248
           TSLRSDL+KKGG  LTIEMDTKVKVKIG VNSKKVGIRV+CEGIKG PPKGK PTVA VS
Sbjct: 186 TSLRSDLRKKGGTALTIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPKGKSPTVASVS 245

Query: 249 DADCKVDLRIKIWIFTL 263
           DADCKVDLRIKIWIFTL
Sbjct: 246 DADCKVDLRIKIWIFTL 262

[Close]

BLAST of Cp4.1LG06g02310.1 vs. ExPASy TrEMBL
Match: A0A6J1F873 (NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111443029 PE=4 SV=1)

HSP 1 Score: 504 bits (1299), Expect = 3.83e-180
Identity = 259/263 (98.48%), Postives = 259/263 (98.48%), Query Frame = 0


Query: 1   MQNGAHPPPKPAVNGSAAPPAANGTAPASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCC 60
           MQNGAHPPPKPAVNGSAAPP ANGTAPASGGKPQFRQQPYRPPPYRHH NHHRSRRNLCC
Sbjct: 1   MQNGAHPPPKPAVNGSAAPPTANGTAPASGGKPQFRQQPYRPPPYRHHSNHHRSRRNLCC 60

Query: 61  CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS 120
           CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS
Sbjct: 61  CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS 120

Query: 121 LFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED 180
           LFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED
Sbjct: 121 LFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED 180

Query: 181 LDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP 240
           LDADS TSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP
Sbjct: 181 LDADSFTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP 240

Query: 241 TVAPVSDADCKVDLRIKIWIFTL 263
           TVA VSDADCKVDLRIKIWIFTL
Sbjct: 241 TVASVSDADCKVDLRIKIWIFTL 263

[Close]

BLAST of Cp4.1LG06g02310.1 vs. ExPASy TrEMBL
Match: A0A6J1IIU4 (NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111477264 PE=4 SV=1)

HSP 1 Score: 503 bits (1295), Expect = 1.56e-179
Identity = 258/263 (98.10%), Postives = 259/263 (98.48%), Query Frame = 0


Query: 1   MQNGAHPPPKPAVNGSAAPPAANGTAPASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCC 60
           MQNGAHPPPKPAVNGSAAPP  NGTAPASGGKPQFRQQPYRPPPYRH RNHHRSRRNLCC
Sbjct: 1   MQNGAHPPPKPAVNGSAAPPTVNGTAPASGGKPQFRQQPYRPPPYRHRRNHHRSRRNLCC 60

Query: 61  CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS 120
           CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS
Sbjct: 61  CFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSS 120

Query: 121 LFNLTLSSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED 180
           LFNLTLSSFNPNSHIT+AYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED
Sbjct: 121 LFNLTLSSFNPNSHITYAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAED 180

Query: 181 LDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP 240
           LDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP
Sbjct: 181 LDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQP 240

Query: 241 TVAPVSDADCKVDLRIKIWIFTL 263
           TVA VSDADCKVDLRIKIWIFTL
Sbjct: 241 TVASVSDADCKVDLRIKIWIFTL 263

[Close]

BLAST of Cp4.1LG06g02310.1 vs. ExPASy TrEMBL
Match: A0A5D3D961 (Chaperonin CPN60-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002160 PE=4 SV=1)

HSP 1 Score: 427 bits (1099), Expect = 9.25e-150
Identity = 220/255 (86.27%), Postives = 232/255 (90.98%), Query Frame = 0


Query: 9   PKPAVNGSAAPPAANGTAPASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCCCFCFWTII 68
           PKP+VNG+A     NGT P S  KP FRQ PYRPPPYR+H NHHR+RRNLCCCFCFWTII
Sbjct: 6   PKPSVNGAA---TTNGTIPPSSSKPNFRQHPYRPPPYRNHHNHHRTRRNLCCCFCFWTII 65

Query: 69  IVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTLSS 128
           IVLGL LLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTT+ DSSASH+SSLFNLTLSS
Sbjct: 66  IVLGLILLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSS 125

Query: 129 FNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSVTS 188
           FNPNSHITF+YDPF +S FSNSVLLANGSIPAF S TKNQTVFR+LMSGAEDLDADSVTS
Sbjct: 126 FNPNSHITFSYDPFLISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSVTS 185

Query: 189 LRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQPTVAPVSDA 248
           LRSDLKK+GG PLTIEMDTKVKVKIG VNSKKVGIRV+CEGIKG PP+GK PTVA VSDA
Sbjct: 186 LRSDLKKRGGTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVSDA 245

Query: 249 DCKVDLRIKIWIFTL 263
           DCKVDLRIKIWIFTL
Sbjct: 246 DCKVDLRIKIWIFTL 257

[Close]

BLAST of Cp4.1LG06g02310.1 vs. ExPASy TrEMBL
Match: A0A1S3BVB2 (uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103493662 PE=4 SV=1)

HSP 1 Score: 427 bits (1099), Expect = 9.25e-150
Identity = 220/255 (86.27%), Postives = 232/255 (90.98%), Query Frame = 0


Query: 9   PKPAVNGSAAPPAANGTAPASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCCCFCFWTII 68
           PKP+VNG+A     NGT P S  KP FRQ PYRPPPYR+H NHHR+RRNLCCCFCFWTII
Sbjct: 6   PKPSVNGAA---TTNGTIPPSSSKPNFRQHPYRPPPYRNHHNHHRTRRNLCCCFCFWTII 65

Query: 69  IVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTLSS 128
           IVLGL LLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTT+ DSSASH+SSLFNLTLSS
Sbjct: 66  IVLGLILLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTSPDSSASHLSSLFNLTLSS 125

Query: 129 FNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSVTS 188
           FNPNSHITF+YDPF +S FSNSVLLANGSIPAF S TKNQTVFR+LMSGAEDLDADSVTS
Sbjct: 126 FNPNSHITFSYDPFLISTFSNSVLLANGSIPAFISGTKNQTVFRTLMSGAEDLDADSVTS 185

Query: 189 LRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQPTVAPVSDA 248
           LRSDLKK+GG PLTIEMDTKVKVKIG VNSKKVGIRV+CEGIKG PP+GK PTVA VSDA
Sbjct: 186 LRSDLKKRGGTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGIKGIPPRGKTPTVASVSDA 245

Query: 249 DCKVDLRIKIWIFTL 263
           DCKVDLRIKIWIFTL
Sbjct: 246 DCKVDLRIKIWIFTL 257

[Close]

BLAST of Cp4.1LG06g02310.1 vs. ExPASy TrEMBL
Match: A0A0A0L2R4 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G646080 PE=4 SV=1)

HSP 1 Score: 423 bits (1087), Expect = 6.68e-148
Identity = 222/257 (86.38%), Postives = 235/257 (91.44%), Query Frame = 0


Query: 9   PKPA-VNGSAAPPAANGTA-PASGGKPQFRQQPYRPPPYRHHRNHHRSRRNLCCCFCFWT 68
           PKP+ VNG+A     NGT  P S  KP FRQ PYRPPPYR+HRNHHRSRRNLCCCFCFWT
Sbjct: 6   PKPSSVNGAA---TTNGTTIPPSSSKPNFRQHPYRPPPYRNHRNHHRSRRNLCCCFCFWT 65

Query: 69  IIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTL 128
           IIIVLGL LLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTT++DSSASH+SSLFNLTL
Sbjct: 66  IIIVLGLILLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTSSDSSASHLSSLFNLTL 125

Query: 129 SSFNPNSHITFAYDPFTLSCFSNSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSV 188
           SSFNPNSHITF+YDPF LS FSNSVLLANGSIPAFTS TKNQTVFR+LMSGAEDLDADSV
Sbjct: 126 SSFNPNSHITFSYDPFLLSTFSNSVLLANGSIPAFTSGTKNQTVFRALMSGAEDLDADSV 185

Query: 189 TSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKGKQPTVAPVS 248
           TSLRSDLKK+GG PLTIEMDTKVKVKIG VNSKKVGIRV+CEG+KG PP+GK P+VA VS
Sbjct: 186 TSLRSDLKKRGGTPLTIEMDTKVKVKIGRVNSKKVGIRVSCEGMKGIPPRGKTPSVASVS 245

Query: 249 DADCKVDLRIKIWIFTL 263
           DADCKVDLRIKIWIFTL
Sbjct: 246 DADCKVDLRIKIWIFTL 259

[Close]

BLAST of Cp4.1LG06g02310.1 vs. TAIR 10
Match: AT5G11890.1 (FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G17620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 205.7 bits (522), Expect = 4.6e-53
Identity = 128/273 (46.89%), Postives = 169/273 (61.90%), Query Frame = 0


Query: 3   NGAHP----PPKPAVNGSAAPPAANGTAPA-SGGKPQF----RQQPYRPPPY--RHHRNH 62
           NGA P    PP PA     A   +NGT    +  KPQ      +  YRP PY  RHH   
Sbjct: 16  NGAPPVGSIPPPPA----PATVTSNGTTNGMANQKPQVYIPANRPVYRPQPYSRRHHHQS 75

Query: 63  HRSRRNLCCCFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAA 122
             S R +CCC CFW+I+I+L LAL+ AIA  A+YV+Y P  P F++ S+RIS++NLTT++
Sbjct: 76  RPSCRRICCCCCFWSILIILILALMTAIAATAMYVIYHPRPPSFSVPSIRISRVNLTTSS 135

Query: 123 DSSASHVSSLFNLTLSSFNPNSHITFAYDPFTLSCFS--NSVLLANGSIPAFTSATKNQT 182
           DSS SH+SS FN TL S NPN H++F+YDPFT++  S  +  +L NG++PAF S   N+T
Sbjct: 136 DSSVSHLSSFFNFTLISENPNQHLSFSYDPFTVTVNSAKSGTMLGNGTVPAFFSDNGNKT 195

Query: 183 VFRSLM---SGAEDLDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVT 242
            F  ++   + A +LD D    LRSDL  +      IEM TKVK+ +G + S+ V I+VT
Sbjct: 196 SFHGVIATSTAARELDPDEAKHLRSDL-TRARVGYEIEMRTKVKMIMGKLKSEGVEIKVT 255

Query: 243 CEGIKGTPPKGKQPTVAPVSDADCKVDLRIKIW 260
           CEG +GT PKGK P VA      CK DL +K+W
Sbjct: 256 CEGFEGTIPKGKTPIVATSKKTKCKSDLSVKVW 283

[Close]

BLAST of Cp4.1LG06g02310.1 vs. TAIR 10
Match: AT1G17620.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 159.5 bits (402), Expect = 3.8e-39
Identity = 105/265 (39.62%), Postives = 147/265 (55.47%), Query Frame = 0


Query: 6   HPPPKPAVNGSAAPPAANGTAPASGGKPQFRQQP-YRPPPYRHHRNHHRSRRNLCCCFCF 65
           +P  KP        P  N T PA+  +     +P YRPP  R   +H    R  CC  C 
Sbjct: 7   YPASKPPAIVGGGAPTTNPTFPANKAQLYNANRPAYRPPAGRRRTSH---TRGCCCRCCC 66

Query: 66  WTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNLTTAADSSASHVSSLFNL 125
           WTI +++ L L+ A A A +Y++YRP RP FT+S L+IS LN T     SA  +++  +L
Sbjct: 67  WTIFVIILLLLIVAAASAVVYLIYRPQRPSFTVSELKISTLNFT-----SAVRLTTAISL 126

Query: 126 TLSSFNPNSHITFAYDPFTLSCFSNS------VLLANGSIPAFTSATKNQTVFRSLM-SG 185
           ++ + NPN ++ F YD   ++ +  S      V++  G+I AF+   KN T  RS + S 
Sbjct: 127 SVIARNPNKNVGFIYDVTDITLYKASTGGDDDVVIGKGTIAAFSHGKKNTTTLRSTIGSP 186

Query: 186 AEDLDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRVTCEGIKGTPPKG 245
            ++LD  S   L+ DLK K    + I +++KVKVK+G + + K GIRVTCEGIK   P G
Sbjct: 187 PDELDEISAGKLKGDLKAKKAVAIKIVLNSKVKVKMGALKTPKSGIRVTCEGIKVVAPTG 246

Query: 246 KQPTVAPVSDADCKVDLRIKIWIFT 263
           K+ T A  S A CKVD R KIW  T
Sbjct: 247 KKATTATTSAAKCKVDPRFKIWKIT 263

[Close]

BLAST of Cp4.1LG06g02310.1 vs. TAIR 10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 80.1 bits (196), Expect = 2.9e-15
Identity = 72/243 (29.63%), Postives = 120/243 (49.38%), Query Frame = 0


Query: 1   MQNGAHPPPKPAVNGSAAPPAANGTAPASGGKPQF-------RQQPYR-PPPYRHHRNHH 60
           M    +P   P  +G  +   ++G  P     P         + Q YR PPP   HR   
Sbjct: 1   MAERVYPADSPPQSGQFSGNFSSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQ 60

Query: 61  RSRR-----NLCCCFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNL 120
            SR+     N  CCFC +   + + L +LA I+ A LY++YRP  P+++I    +S +NL
Sbjct: 61  LSRKKTNRSNCRCCFCSFLAAVFI-LIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINL 120

Query: 121 TTAADSSASHVSSLFNLTLSSFNPNSHITFAYD-PFTLSCFSNSVLLANGSIPAFTSATK 180
                +S S +S  FN+T+ S N N  I   Y+   ++  + N V ++NG +P F    K
Sbjct: 121 -----NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAK 180

Query: 181 NQTVFRSLMSGAE-DLDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRV 229
           N TV + ++SG++  L +     +R+++ KK   P  +++   VK+K G V +  + + V
Sbjct: 181 NVTVVKLVLSGSKIQLTSGMRKEMRNEVSKK-TVPFKLKIKAPVKIKFGSVKTWTMIVNV 236

[Close]

BLAST of Cp4.1LG06g02310.1 vs. TAIR 10
Match: AT2G27080.2 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 80.1 bits (196), Expect = 2.9e-15
Identity = 72/243 (29.63%), Postives = 120/243 (49.38%), Query Frame = 0


Query: 1   MQNGAHPPPKPAVNGSAAPPAANGTAPASGGKPQF-------RQQPYR-PPPYRHHRNHH 60
           M    +P   P  +G  +   ++G  P     P         + Q YR PPP   HR   
Sbjct: 1   MAERVYPADSPPQSGQFSGNFSSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQ 60

Query: 61  RSRR-----NLCCCFCFWTIIIVLGLALLAAIAGAALYVLYRPHRPQFTISSLRISKLNL 120
            SR+     N  CCFC +   + + L +LA I+ A LY++YRP  P+++I    +S +NL
Sbjct: 61  LSRKKTNRSNCRCCFCSFLAAVFI-LIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINL 120

Query: 121 TTAADSSASHVSSLFNLTLSSFNPNSHITFAYD-PFTLSCFSNSVLLANGSIPAFTSATK 180
                +S S +S  FN+T+ S N N  I   Y+   ++  + N V ++NG +P F    K
Sbjct: 121 -----NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAK 180

Query: 181 NQTVFRSLMSGAE-DLDADSVTSLRSDLKKKGGAPLTIEMDTKVKVKIGGVNSKKVGIRV 229
           N TV + ++SG++  L +     +R+++ KK   P  +++   VK+K G V +  + + V
Sbjct: 181 NVTVVKLVLSGSKIQLTSGMRKEMRNEVSKK-TVPFKLKIKAPVKIKFGSVKTWTMIVNV 236

[Close]

BLAST of Cp4.1LG06g02310.1 vs. TAIR 10
Match: AT5G21130.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 78.2 bits (191), Expect = 1.1e-14
Identity = 63/200 (31.50%), Postives = 99/200 (49.50%), Query Frame = 0


Query: 36  RQQPYR-PPPYRHHRNHHRSRRNL---CC--CFCFWTIIIVLGLALLAAIAGAALYVLYR 95
           + Q YR PPP   HR  + SRR     CC  C C+ ++  +L + +LAAIA    Y++Y+
Sbjct: 64  KDQIYRVPPPENAHRYEYLSRRKTNKSCCRRCLCY-SLSALLIIIVLAAIAFGFFYLVYQ 123

Query: 96  PHRPQFTISSLRISKLNLTTAADSSASHVSSLFNLTLSSFNPNSHITFAYDPFT-LSCFS 155
           PH+PQF++S + ++ +NLT     S+S  S +  + L S N    +   Y+       F 
Sbjct: 124 PHKPQFSVSGVSVTGINLT-----SSSPFSPVIRIKLRSQNVKGKLGLIYEKGNEADVFF 183

Query: 156 NSVLLANGSIPAFTSATKNQTVFRSLMSGAEDLDADSVTSLRSDLKKKGGAPLTIEMDTK 215
           N   L NG   AF     N TV  +++ G+      S     ++ +KKG  P  + +   
Sbjct: 184 NGTKLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKELTESQKKGKVPFGLRIKAP 243

Query: 216 VKVKIGGVNSKKVGIRVTCE 229
           VK K+G V +  + I V C+
Sbjct: 244 VKFKVGSVTTWTMTITVDCK 257

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g02310.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVD2	4.1e-14	29.63	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]
Q8LD98	6.2e-10	26.80	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]
Q9FI03	1.0e-04	25.58	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]

BLAST of Cp4.1LG06g02310.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023535537.1	2.46e-183	100.00	NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo]	[more]
KAG6591466.1	2.76e-180	98.86	NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7...	[more]
XP_022936399.1	7.90e-180	98.48	NDR1/HIN1-like protein 6 [Cucurbita moschata] >XP_022936400.1 NDR1/HIN1-like pro...	[more]
XP_022977096.1	3.22e-179	98.10	NDR1/HIN1-like protein 6 [Cucurbita maxima]	[more]
XP_038898818.1	7.50e-155	89.11	NDR1/HIN1-like protein 6 [Benincasa hispida]	[more]

BLAST of Cp4.1LG06g02310.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F873	3.83e-180	98.48	NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111443029 PE=4 SV=1	[more]
A0A6J1IIU4	1.56e-179	98.10	NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111477264 PE=4 SV=1	[more]
A0A5D3D961	9.25e-150	86.27	Chaperonin CPN60-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BVB2	9.25e-150	86.27	uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103493662 PE=4 S...	[more]
A0A0A0L2R4	6.68e-148	86.38	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G646080 PE=4 ...	[more]

BLAST of Cp4.1LG06g02310.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11890.1	4.6e-53	46.89	FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED...	[more]
AT1G17620.1	3.8e-39	39.62	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G27080.1	2.9e-15	29.63	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G27080.2	2.9e-15	29.63	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G21130.1	1.1e-14	31.50	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 126..227 e-value: 5.0E-10 score: 39.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	PANTHER	PTHR31234	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 6..261
None	No IPR available	PANTHER	PTHR31234:SF6	HARPIN-INDUCED PROTEIN	coord: 6..261

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG06g02310	Cp4.1LG06g02310	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG06g02310.1:exon:001	Cp4.1LG06g02310.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG06g02310.1:cds:001	Cp4.1LG06g02310.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG06g02310.1	Cp4.1LG06g02310.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane