Cp4.1LG02g03190.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g03190.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Glutaredoxin-like protein
Location	Cp4.1LG02: 3279569 .. 3286828 (-)
Sequence length	2164
RNA-Seq Expression	Cp4.1LG02g03190.1
Synteny	Cp4.1LG02g03190.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATTTTGTTCTTTTTTTAAAAAAAAATTATTTATTTTTTTATCAGCGGCTGGAGATTCCCCGTCGAAGGAACCCAATTCCAATCACCGGAACTCGAGACCAATCGGGAAGAATGATATCTGCGACTGTTGCGATAATGGCGCGACCTTCTTCAATGTTGCTGCTAGCAGCGCAAAGAGGCCATCGGATTCTTACTCCTGCAGCTTCATTCTCTTCATCTTCTTCTTCTTCAGTTTCCTCTCGCAAATTGATTCTGTACTCGAAGCCTGGATGCTGTCTGTGCGATGGGCTTAAAGAAAAACTACAGGCTGCCTTTCTGCTCGCCGGCCCTGATTCTCTCCACGACGTTGATTTACTGGTACTCATTTCACTCCTCTCTCATTGTGATTCGTTTCCTGTTTTCAGCGTTGATTTTTATTTGTCGTTTGGTTTTGAGTAGGTGAGGGATATTACTACTAATCCTGAATGGGAGAGAGCTTACCAGTATGAGATTCCTGTTCTGGCGAAAGTTCTCTCTGATGGCTCGGAGGTTGGTTCTGTTAATTCATTCATTCGTTGTATTTTGACGGTCTTAACTTATTAGGGAAGGAGTGTGTCTAATTTCAGATTTGTTGAGCTCTTCCGGGGCTTTTAATGTAGAACTGTGCATAGGATTTATAAAATGCTCGAGATGCTTTTGCCCTCCACTTGTGTTTTAAGTCCTTGTTGCACTAGATTGATTACTAACCCCTTGCTCTTGCATTTAACGGTGGAGTTTTATCAGTTCCTATGAGTTGGTCACCTCATCGTCTGTCCTCATTTAAGTTTATACATGATAATAAGTATGAATCCAGCTGGGATTCTGATTAGTTCAACGAGGGAGGTTTTATCAGTGTACTGGAAATTGTTTCGTATCTCCTTTGTTTAATAATTTTTTGTACTGACTGTTCAAAGTATTTTGCTTCCTTAGTTTTTCTCTCCCTAATCTGTCTCGACATAGTCATCCTGCTTAATTCAAAGCCACTCTGAGTGCCTACGGTGACATTAAGTGTAAAAAGAATAAAAATATATGGAAAAGAAGAAGAAGAAGAAGAAAACCCCTGCAACTAGGATACTGAACCACTGAATAGTTCATTTCTTCAGTGAAGGTTTGAAACATTGTGTACCACGACCTTATCTAAATAGAAGGTCTCCTCTACAAATAGGTTTCCTTGGTGTTTGAAACTGTGGCAGTTAGAGTTGGTAGTTGTACTACATCGTGAAGGAATCAGTATGGGACCTAAGCGTTAAATGGTCATATTGTTTTCCTGTTTCATAAATGAAACATACTGAAAATTATTATTCAACAAGATGTGCAACAAAAGAAGTCTTCTGGTGAATGGATTTCGTAGAAGCTCACTTAGATCCACAGTAATCTTACTGATAACATTTCTTGAACACCGGTCAATCATAAGGGCTTTACCAATGATGGCTTGTTGAAATGATGCTGTAACAATTGAATGAGCTCCACAGATTAGCACATATATAGGTCTTATGAATTTTCTGAACTACATGACATTTTAAACTTAGGAATTGGGCTGATAACATTAATAAGCTCTATTGGTAAAGATGCAGAGGCCTATTTCAATGGAAACTCCTTTGTTGGAAAGATGTACCTGAAGCAGAAGCCTCGTATACTTTCAAAGTTGCACATGCTTACTTCTATCTTTATTTCCATTGCTTAAGTATTCTGTAAACTAAGCTGGCTAGGGCTATACCTCCCTGGGACTCTTAGTACGAAGTGAACCAATTGTGATGTTGGTTTCGTTTTGGAGAGGGAAATATGAAACAAGTAAGCTATTGGAAGGGTTTTACTGTGAGTTAACAAATTTCAAACAAGGTTCCCCTAAAAAGTAATGTATATGAAGATACAAGTAACATAAAGGTCCATACATTCTGAATATTCTCTCATTTTAGTTTCATCTCTATGTTAGAAGCCAGTTACCATTTGGAAAGCACTCAAATGCATCTCTCTCCTTTACCATCCCTCAACCAGTGGAGGTCAGTCGATGAGATTAAGTCTGTCACCTAGGTGGCATCTCTAAAGAAAATGTAGTAAAGATAATGAGCACAAAATGTTGAACTATTTCTTTTTTGGTTTTGTGTGATTCCAAAACTTAATAACCTTCCAGTCGTGAGGACCCACGGGGAGTTCCCCCTGAGGGAGGTGTATTACTCATCTCTTTTCTGGCTTGACTGAGAGGGAGTTGTTGCTCAATAGGTGTCACTTTGAGAGCTGCCTTTTTGTAATGCTTCATGCTTAGGATTCGACACTTGATGACTCCAATATTCTCCTGCATCCCCTTCAACATGGTCACCATGTTGTGTGACGGGTGTGTCGCCACGTTTAGCGCAGTGACCTGGGTTGCCTCTATCTCAGGCGTCTCTTGAGAGGGAACATCGGTGGTTTGTGCTTTACCACCCCTTGTACGACGCCTGCTAATTCCACCTCTAGTTTTAGGTGCCATTTCTATCAAATCACAAATTTTAGGTTAGGATTTATTCCTCACGTTTCTCAATACAACACCATGCACGACATGATTCCAAACTTGGCATAGTTTTAGACAGTCAATTCAATTCACTGAAAGATTTCAACTACTCATGCTAGTTTAATCCGGATTGGACGCTTGATGATGTGGGGCGTTAGACGTTTTCTATTATTATTATTGTTGATCATTAAAAAAAAAATATAGCTTAATCCGGATTCGGCACTTGATAGTGTACATTTTTTTTTCTTTCAGTTAAAAAATCATTAAAAAAAACTTTCTTGAAAGAAAAGAAGATACCTCCCTACAGGCCAAACAACTTACAAAACTGCTCCTCAATTGGCAACTATCGAAGGAAAGGATTCTAATCACAAAAATCTATGGAAAGAATATAACATAACTCAAAATTTTGGAAGTATATGACCAATGTCAAGTTGTCAACATGAAAATAGCTCAATAGTTAAATCATCTCTACTTCTTCTAAGAAGTTGTCGGTTCAAATCTCTACCTACATGTGATTTTGTAATATGACTGCTACATTTACTGAAAGTGAAAATATTAACGTAATTATTTGAGGAATACTATGACTCTTAAGACTTTTTTTTGGGTATAATTTATGTTCGAAATTCTTCAAGCCAAATGGAATATATTTTTTTGCCTCGACTACCTTTGCCTGACGTGGTAGCCTATGCTGCCGTATGGAATTATTTGCACATTTGTAACCGTGTACTTCTTCTCCCAATTATAACCCTGCACTTTCTTCTCCTAAAGTTCGTGACGAATTGTCACTTACATTACTTTGTTCACCTTTTCTTTTCTTTTCCTTTTTTGGAAAGGGGAAGAGGATAAACGTAGTTTTCATTTATTGTATTTATACCAATAATTTTTAATCTGATTTTTTTTTTTTATAATATCTTGACTCAGATAATTATTTTTTATTTTGATACTTGTTTCTGGCAATTTTTTTAGAAAATAAATTAAACAATCTTGCAATCCTAGAAAACAAAGAGCTATGCAGTGTGATTATTAAAATTATATGTTCTATAATAAATTTTTAACATTTCATGTTCCCTTTGTATAGTTTGATTCTAAGATGTTTTATCTGGACAATCGTTCATTTTTTTCTTTTAGTTTTCGAGCATTCTTGCGGACTTATTTATGCCGTGTGTCAGTTTGCTTAGGTCTAATGTCTTCATCTTTTCGTTCCTTCTTTTGGACCCTTTATGTGTTGCCTTGTACGATTTGAGTTTGTGTTGATAGTTTAATTTAAACTTTTTCTTTCTCCTTACGTCAATCCAGAACTTTATGAACATTTTTTCTAACATTCAGATTATTCTGTTGGTATATTGTCTTTTCTTGGAGTCCCTATAATAAAATTTGGATCATAATTTGTTTCCACTATTTTATGGATGTTATGTAGCATGTAAAATTTTCAAAATTATGATAATCTATGTACTTAAAGTAATCATATGATTAGCTTCAGATATTCTTATCTACAAAGGCTTCTCTTTTAAATGAAAGCATTCAAGACTATCTTTCCTTTGATGTTTGACCTCTTAACCCTAAACAGTAATTAGAATTCATGTATTTTCTAATGTCCCATATGTGATAACCGTAGATTTATAAATCTAGGCAATCTGTTTTTGTGTAATTTGCTAAAGTAGTCACGTTTCATGTATTTCTGATATCTCGTAACTGGCAAGGGATAGCAGCAGAGTTAGAAATCTAGGCCAGGTGTATAATTGTATTGTTTTACCATAAACTGGGTTTAGTATTTATTGGAGCTCGGGTGTAGAAATTTAGCCTGATACTATCTCAAAGTTTCTGATAAACCAATGTTCATTTTTTATATGTAGAAAAGATGTGTTTCCTTTTGTTAGTTACCGAGTAATATTCTCAATTATTCTGTTTTTACTTCCTATAGTTATACCTCCCTCATTGCAACTTGGGAAGGTCTTTTGTAAACACCATGGATTATACATCCCTTTTGTTAATTTCAATCATCAATGCAATTGTCTCTTATAAAAAAAAAAAATATATATATATATATATATTCCGTTTGTGTAACTTGACATTGGAGAATATTCAGATATATTTAGAGTTACAATGATCTCTATTCGACTATCTCGATTCGTTTTTTTTAAGATGATACTTGGTTACACAGACGGCAAGTTAGCAAACTCTAGGTTCTGTGGTTTTGTGCTCTGTTCACATAAATTTTGGTCTCGAGAGTTTTCCATATGTTCTGTTTCGTGTTGTCATGAACTAACAACACAAAAGCATTCGCAGACAGGCACTAGCTTATCCTGACTCATTGCTCACTGATGGGTGTTGATTCCTCTTTTGTATTATTAATCTTGACTCGTTGCTCGCTGATGGGTGTCGATTCCTTTTTTGTATTATTAATCTTTTGACCCAATTTTCATCAATGGAAACTTGCTTTAATTGGTGGAATTCCTTTTAACACCAATGCCACGCGTCAAATGAAGCAAATTGACGTAATATTTGTGTTCAAAAGTTCTTCTCAGACTCTAGCCTTCAGAGATATTCTATCCTTTCATTTTCCTTTTTTTTTTTGGGTGCTTTTAATATTTTCCGTGTAATGCTAAACACATTGGGTCCCTTTTCGTGTGCAATTAAATCATTCCTGAATCTGAAACTCACATAGAAAATCTGCACTTTAGAGCATGTTCTTTTGAATATTTAGGTTAATTTTTACCTTACTAATACATGAACATTTATAACAGGAAACTCTTCCTCGGCTATCTCCTCGTCTCGGGGTGGAGCTCATTCAGAAGAAACTAGCAGCTGCCTTGCAGTAGGAGACAAGCATTCTTGTTCTGTAATTAAATTCTAATCTCAGGCTGTATTTTAATTTCTTTTAAAGAAAAACATAAATATTCTTTTATTCCAACTTGAGATAAAAGATGAGAACCCTTTGAGATGCATCGCATGGATTCTTTTATTCACAATATATATATATTGTCGTTTTCACTTTCTACTATACCATATTTGACTATATTTCTCTTTGCATGAAATTATTGACCACCATTATCATAATCTATTCAAATACGCCATCCATTCCTAATCTTTATTTCATTCACTAATTTCTTTCTTTCATTTTTTTTGTGACAGTGACTAGACATTCGTTTATGCTTCAGAAAAAGGGTTTGCATAAAAGGGAGGATGGGGAGGGAAAAAGGTGTAGAAAAGGAGAGAATTTGGCCTGGTCAAAAGTTGCTAACATGAGCAAACACAATATTCAATTGAAAGTTTTGTAGGTTTCCTATCTCCACGGTGTATCTCTCTCACTTGAATTATTACCAGAGTTCCAAACTTGTAAGTTCACTCAATCTCTCCTTGGTTTGTTGCAAAAACCCGTCTTTTTTTTGTTAGAATTGATCTCTTATATTGTGACAGTTCAAAAAACTGAAGCCTTTAGCTACGAAATATGACCTAACTTCTTTCATCCCTTTAAAGTTACAAAATAGGGTACCCAATAGTTCTTTTCATCAAGGGTAGGATTGTCCTTTCCCCGACTTCCCGCTCCGCCGACCACATGATCTATTTTGCCCATCCTGAAAATTTACTGTTAGATTCTGTTCTTGAAACCATTTTCAAAATTTGGATTCCCTTGCCATTTCAAACAAGGCTGTTTTTGTTTTCCTCTATTGCATCTTTGATTGGCTTGACCATCAATCAATCAATCATCATTTCTTTGATCCCTACAGCAAACTTCACTTCACTTCACTTCACTTCCTTTGAAGAAAAGGATAAAAAAAAAAAAAAAAACCTTGTTTGAAGAACTTTATGTACATGGAGCCTCTTGCTTTGGGGTTATTACTTGCTATTTTACACGAGGAAAGTTTGGCCAATAATTAGATTAGATTCCTTTAGATTAATGGCAACTTACTTTCACCCCTTCTTTCAATCCTCACTTTATGGCAATTTTGCTTTTGAATTATGGGCACTTCATCATATATTGCATATAATATGCATGTCTTCTTTGCCAGGACTTTCATAAAGGCTCCATTTTCACCCCCTTTATTCATTTTCTTGGGATTTGATGTGTTCTTAAACTATTCATTCATGCATGACACCAGGTCAATACACCAATGATTTATTAATGTTTTGAATAATTTTGTTGGACTCTAGCTCCCTTACTAATTGGAACTTGGAAATGAGGCTTAATAGTTTTCTTATTTTGAACTGCGATACTTTCACTTTCAATTAACATATAATTGTGAATTATTGTTGAGATTTTATTGGCTTTCGTACATAGCTATATTAATAAACTAATTAGAATTTGATATTGGTAAGGATATTTAGTACTAAATTATAGTTTACCATATATATCATACTTGATATTTTATTATAGGTAAATATCAAAATATTTGCTTCGGTAGCTTTCCATTTATAGTTCTATTTCCATATCCTTGTAATTTATTTGATTCTCGTAATTTATTTGATTATAAATAGAGAACTTTCACACCCTGAAATGTGGTGGATTAAGCAAATATTCTCACATATGTTCTAACTTTAGTTAATTAATACAAATCAATATGAATTTAGTCTTAGTATTTAATGGTTATGTGCCATCCGTGTTAAATTTAAATACACGTTAAATCTTACGTATTAAAGTTTTGAGATCAAATTAGAATAAGAAATGACTGAGAAAACAATAATGGCTCTATTTTACCTCTTTTTAACCGCCATGGTAATTAAAAATGATAATAATAAATATAATAGAAATTAG

mRNA sequence

CGATTTTGTTCTTTTTTTAAAAAAAAATTATTTATTTTTTTATCAGCGGCTGGAGATTCCCCGTCGAAGGAACCCAATTCCAATCACCGGAACTCGAGACCAATCGGGAAGAATGATATCTGCGACTGTTGCGATAATGGCGCGACCTTCTTCAATGTTGCTGCTAGCAGCGCAAAGAGGCCATCGGATTCTTACTCCTGCAGCTTCATTCTCTTCATCTTCTTCTTCTTCAGTTTCCTCTCGCAAATTGATTCTGTACTCGAAGCCTGGATGCTGTCTGTGCGATGGGCTTAAAGAAAAACTACAGGCTGCCTTTCTGCTCGCCGGCCCTGATTCTCTCCACGACGTTGATTTACTGGTGAGGGATATTACTACTAATCCTGAATGGGAGAGAGCTTACCAGTATGAGATTCCTGTTCTGGCGAAAGTTCTCTCTGATGGCTCGGAGGAAACTCTTCCTCGGCTATCTCCTCGTCTCGGGGTGGAGCTCATTCAGAAGAAACTAGCAGCTGCCTTGCAGTAGGAGACAAGCATTCTTGTTCTTGACTAGACATTCGTTTATGCTTCAGAAAAAGGGTTTGCATAAAAGGGAGGATGGGGAGGGAAAAAGGTGTAGAAAAGGAGAGAATTTGGCCTGGTCAAAAGTTGCTAACATGAGCAAACACAATATTCAATTGAAAGTTTTGTAGGTTTCCTATCTCCACGGTGTATCTCTCTCACTTGAATTATTACCAGAGTTCCAAACTTGTAAGTTCACTCAATCTCTCCTTGGTTTGTTGCAAAAACCCGTCTTTTTTTTGTTAGAATTGATCTCTTATATTGTGACAGTTCAAAAAACTGAAGCCTTTAGCTACGAAATATGACCTAACTTCTTTCATCCCTTTAAAGTTACAAAATAGGGTACCCAATAGTTCTTTTCATCAAGGGTAGGATTGTCCTTTCCCCGACTTCCCGCTCCGCCGACCACATGATCTATTTTGCCCATCCTGAAAATTTACTGTTAGATTCTGTTCTTGAAACCATTTTCAAAATTTGGATTCCCTTGCCATTTCAAACAAGGCTGTTTTTGTTTTCCTCTATTGCATCTTTGATTGGCTTGACCATCAATCAATCAATCATCATTTCTTTGATCCCTACAGCAAACTTCACTTCACTTCACTTCACTTCCTTTGAAGAAAAGGATAAAAAAAAAAAAAAAAACCTTGTTTGAAGAACTTTATGTACATGGAGCCTCTTGCTTTGGGGTTATTACTTGCTATTTTACACGAGGAAAGTTTGGCCAATAATTAGATTAGATTCCTTTAGATTAATGGCAACTTACTTTCACCCCTTCTTTCAATCCTCACTTTATGGCAATTTTGCTTTTGAATTATGGGCACTTCATCATATATTGCATATAATATGCATGTCTTCTTTGCCAGGACTTTCATAAAGGCTCCATTTTCACCCCCTTTATTCATTTTCTTGGGATTTGATGTGTTCTTAAACTATTCATTCATGCATGACACCAGGTCAATACACCAATGATTTATTAATGTTTTGAATAATTTTGTTGGACTCTAGCTCCCTTACTAATTGGAACTTGGAAATGAGGCTTAATAGTTTTCTTATTTTGAACTGCGATACTTTCACTTTCAATTAACATATAATTGTGAATTATTGTTGAGATTTTATTGGCTTTCGTACATAGCTATATTAATAAACTAATTAGAATTTGATATTGGTAAGGATATTTAGTACTAAATTATAGTTTACCATATATATCATACTTGATATTTTATTATAGGTAAATATCAAAATATTTGCTTCGGTAGCTTTCCATTTATAGTTCTATTTCCATATCCTTGTAATTTATTTGATTCTCGTAATTTATTTGATTATAAATAGAGAACTTTCACACCCTGAAATGTGGTGGATTAAGCAAATATTCTCACATATGTTCTAACTTTAGTTAATTAATACAAATCAATATGAATTTAGTCTTAGTATTTAATGGTTATGTGCCATCCGTGTTAAATTTAAATACACGTTAAATCTTACGTATTAAAGTTTTGAGATCAAATTAGAATAAGAAATGACTGAGAAAACAATAATGGCTCTATTTTACCTCTTTTTAACCGCCATGGTAATTAAAAATGATAATAATAAATATAATAGAAATTAG

Coding sequence (CDS)

ATGATATCTGCGACTGTTGCGATAATGGCGCGACCTTCTTCAATGTTGCTGCTAGCAGCGCAAAGAGGCCATCGGATTCTTACTCCTGCAGCTTCATTCTCTTCATCTTCTTCTTCTTCAGTTTCCTCTCGCAAATTGATTCTGTACTCGAAGCCTGGATGCTGTCTGTGCGATGGGCTTAAAGAAAAACTACAGGCTGCCTTTCTGCTCGCCGGCCCTGATTCTCTCCACGACGTTGATTTACTGGTGAGGGATATTACTACTAATCCTGAATGGGAGAGAGCTTACCAGTATGAGATTCCTGTTCTGGCGAAAGTTCTCTCTGATGGCTCGGAGGAAACTCTTCCTCGGCTATCTCCTCGTCTCGGGGTGGAGCTCATTCAGAAGAAACTAGCAGCTGCCTTGCAGTAG

Protein sequence

MISATVAIMARPSSMLLLAAQRGHRILTPAASFSSSSSSSVSSRKLILYSKPGCCLCDGLKEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRLSPRLGVELIQKKLAAALQ

Homology

[Close]

BLAST of Cp4.1LG02g03190.1 vs. NCBI nr
Match: XP_023522644.1 (uncharacterized protein LOC111786639 [Cucurbita pepo subsp. pepo] >XP_023522650.1 uncharacterized protein LOC111786639 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253 bits (647), Expect = 1.29e-84
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MISATVAIMARPSSMLLLAAQRGHRILTPAASFSSSSSSSVSSRKLILYSKPGCCLCDGL 60
           MISATVAIMARPSSMLLLAAQRGHRILTPAASFSSSSSSSVSSRKLILYSKPGCCLCDGL
Sbjct: 1   MISATVAIMARPSSMLLLAAQRGHRILTPAASFSSSSSSSVSSRKLILYSKPGCCLCDGL 60

Query: 61  KEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRLSP 120
           KEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRLSP
Sbjct: 61  KEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRLSP 120

Query: 121 RLGVELIQKKLAAALQ 136
           RLGVELIQKKLAAALQ
Sbjct: 121 RLGVELIQKKLAAALQ 136

[Close]

BLAST of Cp4.1LG02g03190.1 vs. NCBI nr
Match: XP_022939983.1 (uncharacterized protein LOC111445753 [Cucurbita moschata] >XP_022939984.1 uncharacterized protein LOC111445753 [Cucurbita moschata])

HSP 1 Score: 240 bits (612), Expect = 2.99e-79
Identity = 132/138 (95.65%), Postives = 133/138 (96.38%), Query Frame = 0


Query: 1   MISATVAIMARPSSMLLLAAQRGHRILTPAASFSSSSSSS--VSSRKLILYSKPGCCLCD 60
           MISATVAIM+RPSS LLLAAQRG RILTPAASFSSSSSSS  VSSRKLILYSKPGCCLCD
Sbjct: 1   MISATVAIMSRPSSTLLLAAQRGRRILTPAASFSSSSSSSSSVSSRKLILYSKPGCCLCD 60

Query: 61  GLKEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRL 120
           GLKEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVL DGSEETLPRL
Sbjct: 61  GLKEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLPDGSEETLPRL 120

Query: 121 SPRLGVELIQKKLAAALQ 136
           SPRLGVELIQKKLAAALQ
Sbjct: 121 SPRLGVELIQKKLAAALQ 138

[Close]

BLAST of Cp4.1LG02g03190.1 vs. NCBI nr
Match: KAG6608053.1 (hypothetical protein SDJN03_01395, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031682.1 hypothetical protein SDJN02_05723 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 238 bits (608), Expect = 1.22e-78
Identity = 131/138 (94.93%), Postives = 133/138 (96.38%), Query Frame = 0


Query: 1   MISATVAIMARPSSMLLLAAQRGHRILTPAASFSSSSSSS--VSSRKLILYSKPGCCLCD 60
           MISATVAIM+RPSS LLLAA+RG RILTPAASFSSSSSSS  VSSRKLILYSKPGCCLCD
Sbjct: 1   MISATVAIMSRPSSTLLLAAKRGRRILTPAASFSSSSSSSSSVSSRKLILYSKPGCCLCD 60

Query: 61  GLKEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRL 120
           GLKEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVL DGSEETLPRL
Sbjct: 61  GLKEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLPDGSEETLPRL 120

Query: 121 SPRLGVELIQKKLAAALQ 136
           SPRLGVELIQKKLAAALQ
Sbjct: 121 SPRLGVELIQKKLAAALQ 138

[Close]

BLAST of Cp4.1LG02g03190.1 vs. NCBI nr
Match: XP_022981072.1 (uncharacterized protein LOC111480330 [Cucurbita maxima] >XP_022981073.1 uncharacterized protein LOC111480330 [Cucurbita maxima])

HSP 1 Score: 235 bits (600), Expect = 1.71e-77
Identity = 128/136 (94.12%), Postives = 131/136 (96.32%), Query Frame = 0


Query: 1   MISATVAIMARPSSMLLLAAQRGHRILTPAASFSSSSSSSVSSRKLILYSKPGCCLCDGL 60
           MISATVAIM+RPSS LLLAAQRG RILTPAASFSSSS   VSSRKLI+YSKPGCCLCDGL
Sbjct: 1   MISATVAIMSRPSSTLLLAAQRGRRILTPAASFSSSS---VSSRKLIMYSKPGCCLCDGL 60

Query: 61  KEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRLSP 120
           KEKLQAAFLLAGP+SLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRLSP
Sbjct: 61  KEKLQAAFLLAGPNSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRLSP 120

Query: 121 RLGVELIQKKLAAALQ 136
           RLGVELIQKKLAAALQ
Sbjct: 121 RLGVELIQKKLAAALQ 133

[Close]

BLAST of Cp4.1LG02g03190.1 vs. NCBI nr
Match: XP_022141305.1 (uncharacterized protein LOC111011727 isoform X2 [Momordica charantia])

HSP 1 Score: 206 bits (524), Expect = 7.02e-66
Identity = 114/137 (83.21%), Postives = 122/137 (89.05%), Query Frame = 0


Query: 1   MISATVAIMARPSSMLLLA-AQRGHRILTPAASFSSSSSSSVSSRKLILYSKPGCCLCDG 60
           MISAT   +ARP+S +LL  AQR  RIL P+ASFSSSS++   SRKLILYSKPGCCLCDG
Sbjct: 1   MISATATAIARPASRVLLTTAQRTRRILIPSASFSSSSAAP--SRKLILYSKPGCCLCDG 60

Query: 61  LKEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRLS 120
           LKEKLQAAFLLAGPDSLHDVDL VRDIT+NPEWERAYQYEIPVLAKVL+DGSEE LPRLS
Sbjct: 61  LKEKLQAAFLLAGPDSLHDVDLQVRDITSNPEWERAYQYEIPVLAKVLADGSEEALPRLS 120

Query: 121 PRLGVELIQKKLAAALQ 136
           PRLGVELIQKKLAA LQ
Sbjct: 121 PRLGVELIQKKLAAVLQ 135

[Close]

BLAST of Cp4.1LG02g03190.1 vs. ExPASy TrEMBL
Match: A0A6J1FN20 (Glutaredoxin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445753 PE=3 SV=1)

HSP 1 Score: 240 bits (612), Expect = 1.45e-79
Identity = 132/138 (95.65%), Postives = 133/138 (96.38%), Query Frame = 0


Query: 1   MISATVAIMARPSSMLLLAAQRGHRILTPAASFSSSSSSS--VSSRKLILYSKPGCCLCD 60
           MISATVAIM+RPSS LLLAAQRG RILTPAASFSSSSSSS  VSSRKLILYSKPGCCLCD
Sbjct: 1   MISATVAIMSRPSSTLLLAAQRGRRILTPAASFSSSSSSSSSVSSRKLILYSKPGCCLCD 60

Query: 61  GLKEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRL 120
           GLKEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVL DGSEETLPRL
Sbjct: 61  GLKEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLPDGSEETLPRL 120

Query: 121 SPRLGVELIQKKLAAALQ 136
           SPRLGVELIQKKLAAALQ
Sbjct: 121 SPRLGVELIQKKLAAALQ 138

[Close]

BLAST of Cp4.1LG02g03190.1 vs. ExPASy TrEMBL
Match: A0A6J1ISY9 (Glutaredoxin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111480330 PE=3 SV=1)

HSP 1 Score: 235 bits (600), Expect = 8.28e-78
Identity = 128/136 (94.12%), Postives = 131/136 (96.32%), Query Frame = 0


Query: 1   MISATVAIMARPSSMLLLAAQRGHRILTPAASFSSSSSSSVSSRKLILYSKPGCCLCDGL 60
           MISATVAIM+RPSS LLLAAQRG RILTPAASFSSSS   VSSRKLI+YSKPGCCLCDGL
Sbjct: 1   MISATVAIMSRPSSTLLLAAQRGRRILTPAASFSSSS---VSSRKLIMYSKPGCCLCDGL 60

Query: 61  KEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRLSP 120
           KEKLQAAFLLAGP+SLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRLSP
Sbjct: 61  KEKLQAAFLLAGPNSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRLSP 120

Query: 121 RLGVELIQKKLAAALQ 136
           RLGVELIQKKLAAALQ
Sbjct: 121 RLGVELIQKKLAAALQ 133

[Close]

BLAST of Cp4.1LG02g03190.1 vs. ExPASy TrEMBL
Match: A0A6J1CHP7 (Glutaredoxin-like protein OS=Momordica charantia OX=3673 GN=LOC111011727 PE=3 SV=1)

HSP 1 Score: 206 bits (524), Expect = 3.40e-66
Identity = 114/137 (83.21%), Postives = 122/137 (89.05%), Query Frame = 0


Query: 1   MISATVAIMARPSSMLLLA-AQRGHRILTPAASFSSSSSSSVSSRKLILYSKPGCCLCDG 60
           MISAT   +ARP+S +LL  AQR  RIL P+ASFSSSS++   SRKLILYSKPGCCLCDG
Sbjct: 1   MISATATAIARPASRVLLTTAQRTRRILIPSASFSSSSAAP--SRKLILYSKPGCCLCDG 60

Query: 61  LKEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRLS 120
           LKEKLQAAFLLAGPDSLHDVDL VRDIT+NPEWERAYQYEIPVLAKVL+DGSEE LPRLS
Sbjct: 61  LKEKLQAAFLLAGPDSLHDVDLQVRDITSNPEWERAYQYEIPVLAKVLADGSEEALPRLS 120

Query: 121 PRLGVELIQKKLAAALQ 136
           PRLGVELIQKKLAA LQ
Sbjct: 121 PRLGVELIQKKLAAVLQ 135

[Close]

BLAST of Cp4.1LG02g03190.1 vs. ExPASy TrEMBL
Match: A0A6J1CJH2 (Glutaredoxin-like protein OS=Momordica charantia OX=3673 GN=LOC111011727 PE=3 SV=1)

HSP 1 Score: 204 bits (519), Expect = 8.25e-65
Identity = 113/136 (83.09%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 1   MISATVAIMARPSSMLLLA-AQRGHRILTPAASFSSSSSSSVSSRKLILYSKPGCCLCDG 60
           MISAT   +ARP+S +LL  AQR  RIL P+ASFSSSS++   SRKLILYSKPGCCLCDG
Sbjct: 1   MISATATAIARPASRVLLTTAQRTRRILIPSASFSSSSAAP--SRKLILYSKPGCCLCDG 60

Query: 61  LKEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRLS 120
           LKEKLQAAFLLAGPDSLHDVDL VRDIT+NPEWERAYQYEIPVLAKVL+DGSEE LPRLS
Sbjct: 61  LKEKLQAAFLLAGPDSLHDVDLQVRDITSNPEWERAYQYEIPVLAKVLADGSEEALPRLS 120

Query: 121 PRLGVELIQKKLAAAL 135
           PRLGVELIQKKLAA L
Sbjct: 121 PRLGVELIQKKLAAVL 134

[Close]

BLAST of Cp4.1LG02g03190.1 vs. ExPASy TrEMBL
Match: A0A0A0L383 (Glutaredoxin-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G365550 PE=3 SV=1)

HSP 1 Score: 197 bits (500), Expect = 1.54e-62
Identity = 110/139 (79.14%), Postives = 116/139 (83.45%), Query Frame = 0


Query: 1   MISATVAIMARPSSM---LLLAAQRGHRILTPAASFSSSSSSSVSSRKLILYSKPGCCLC 60
           MIS+T A + RPSS    LLL  Q   RILTP+ASFSSS    + SRKLILYSKPGCCLC
Sbjct: 1   MISSTAAKIGRPSSSPLSLLLKPQTSRRILTPSASFSSS----LPSRKLILYSKPGCCLC 60

Query: 61  DGLKEKLQAAFLLAGPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPR 120
           DGLKEKL AAFLL+GPDSLHDV L VRDITTNPEWERAYQYEIPVLAKV SDGSEE LPR
Sbjct: 61  DGLKEKLHAAFLLSGPDSLHDVHLQVRDITTNPEWERAYQYEIPVLAKVRSDGSEEVLPR 120

Query: 121 LSPRLGVELIQKKLAAALQ 136
           LSPRLGVE +QKKLAAALQ
Sbjct: 121 LSPRLGVEFVQKKLAAALQ 135

[Close]

BLAST of Cp4.1LG02g03190.1 vs. TAIR 10
Match: AT4G08280.1 (Thioredoxin superfamily protein )

HSP 1 Score: 161.4 bits (407), Expect = 5.2e-40
Identity = 90/127 (70.87%), Postives = 97/127 (76.38%), Query Frame = 0


Query: 9   MARPSSMLLLAAQRGHRILTPAASFSSSSSSSVSSRKLILYSKPGCCLCDGLKEKLQAAF 68
           MA   S  L+ A R   +     S SSSSSS  ++RKL+LYSKPGCCLCDGLKEKL AAF
Sbjct: 1   MAAAISATLVFAARRRPLF---CSLSSSSSSKPNTRKLVLYSKPGCCLCDGLKEKLHAAF 60

Query: 69  LLA-GPDSLHDVDLLVRDITTNPEWERAYQYEIPVLAKVLSDGSEETLPRLSPRLGVELI 128
            L+ GPDSL+DV L VRDITTNPEWERAYQYEIPVLAK  SDG EE LPRLSPRL  ELI
Sbjct: 61  TLSTGPDSLNDVTLQVRDITTNPEWERAYQYEIPVLAKENSDGKEEVLPRLSPRLSAELI 120

Query: 129 QKKLAAA 135
           QKKL AA
Sbjct: 121 QKKLLAA 124

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g03190.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG02g03190.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023522644.1	1.29e-84	100.00	uncharacterized protein LOC111786639 [Cucurbita pepo subsp. pepo] >XP_023522650....	[more]
XP_022939983.1	2.99e-79	95.65	uncharacterized protein LOC111445753 [Cucurbita moschata] >XP_022939984.1 unchar...	[more]
KAG6608053.1	1.22e-78	94.93	hypothetical protein SDJN03_01395, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022981072.1	1.71e-77	94.12	uncharacterized protein LOC111480330 [Cucurbita maxima] >XP_022981073.1 uncharac...	[more]
XP_022141305.1	7.02e-66	83.21	uncharacterized protein LOC111011727 isoform X2 [Momordica charantia]	[more]

BLAST of Cp4.1LG02g03190.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FN20	1.45e-79	95.65	Glutaredoxin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445753 PE=3 SV=...	[more]
A0A6J1ISY9	8.28e-78	94.12	Glutaredoxin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111480330 PE=3 SV=1	[more]
A0A6J1CHP7	3.40e-66	83.21	Glutaredoxin-like protein OS=Momordica charantia OX=3673 GN=LOC111011727 PE=3 SV...	[more]
A0A6J1CJH2	8.25e-65	83.09	Glutaredoxin-like protein OS=Momordica charantia OX=3673 GN=LOC111011727 PE=3 SV...	[more]
A0A0A0L383	1.54e-62	79.14	Glutaredoxin-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G365550 PE=3 SV=1	[more]

BLAST of Cp4.1LG02g03190.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G08280.1	5.2e-40	70.87	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008554	Glutaredoxin-like	PFAM	PF05768	DUF836	coord: 45..131 e-value: 1.4E-20 score: 73.4
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 38..129 e-value: 1.6E-16 score: 62.0
None	No IPR available	PANTHER	PTHR33558	GLUTAREDOXIN-LIKE PROTEIN C5ORF63 HOMOLOG	coord: 10..135
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 38..118

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG02g03190	Cp4.1LG02g03190	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g03190.1:exon:004	Cp4.1LG02g03190.1:exon:004	exon
Cp4.1LG02g03190.1:exon:003	Cp4.1LG02g03190.1:exon:003	exon
Cp4.1LG02g03190.1:exon:002	Cp4.1LG02g03190.1:exon:002	exon
Cp4.1LG02g03190.1:exon:001	Cp4.1LG02g03190.1:exon:001	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g03190.1:three_prime_utr:002	Cp4.1LG02g03190.1:three_prime_utr:002	three_prime_UTR
Cp4.1LG02g03190.1:three_prime_utr:001	Cp4.1LG02g03190.1:three_prime_utr:001	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g03190.1:cds:003	Cp4.1LG02g03190.1:cds:003	CDS
Cp4.1LG02g03190.1:cds:002	Cp4.1LG02g03190.1:cds:002	CDS
Cp4.1LG02g03190.1:cds:001	Cp4.1LG02g03190.1:cds:001	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g03190.1:five_prime_utr:001	Cp4.1LG02g03190.1:five_prime_utr:001	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g03190.1	Cp4.1LG02g03190.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane