CmoCh19G002560.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh19G002560.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	AT-hook motif nuclear-localized protein
Location	Cmo_Chr19: 1864916 .. 1869691 (+)
Sequence length	1214
RNA-Seq Expression	CmoCh19G002560.1
Synteny	CmoCh19G002560.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCACGTGATACTCCACCTCCACCACTTTCTGCACCGTCCAACATGGCGATCGGAGGACCGTCGGCGTATTCAACCGCCATGACCAATGCCAACAACAATGCCTCTTCCAATATGGCTCTCTTTCCGCCTACCTCTCAGATGATGCCTCCTTCTGCGCGATTTCCGTTCAAGTCTGTGATCTCCCCTGCATCCCTGCATTTGGATTCTATGAACGCTTCTCCTTACGACGGAACGCATTCCGGAAATTTCAATGTCGATTCCGGAAAGAAAAGGAGGGGCCGGCCGAGGAAGTACGATCCTGATGGTAATATCATCGCCTTGGGTTTGGCACCTACCACTGTTGTTACCTCTTCTGTTGTGCACGGGGATTTGAGCGCTACTCCTGATTTGGAGCAGCCGGTCAGGAAACCGAGGGGAAGGCCGCGGGGCTCTGGAAAGAAACAGACGAATGCTCTTGGTATTGTCAATTGAATTACGGTTTCGTTGCATTTTTCTTTTGTTCATGTTTCGTTGATTGCATCAGGGCATTTTGTTGTGTAGGTTCAAGCGGCACTAGTTTTACTCCTTACGCCGTATTGGCGAAGCCTGGAGAGGTATGCATTTTATCTAATTCTTGGCTTGGTTTTTACACAACAAATGAAATTTGAATGATGGATCTTTCTAAACTGATCTTCAGTCTTGCTCGTTGAAGGTGAAGTGCATTTATTAGAATGATTGTTATGCACGCAAAAGAATGTGTTATAATTGGAAAAGTAAGGCAGCAATCACTTTTTTCTGTTTGTAGTTCTAGGAAAACTTCGGATATGGTGTAAAACTACATTCAAACTGTATGGTAAGTGGTTATATTGAATGGGATACTGGATTTCTGGGTGTCTCTTTAGATGATTCATTATAATTATACATCCAAATTAAATATGGCAAAATCTATGGAGAAAATGTGAATTCCTGAAATCTGATAGCTTGTTCGATATCTTCAACCAGAAATTATTTTGATTTGTAATTAGAAGTCTATTGTAATTGTTTTATCCTTGATGTTGACAAATGGTAGTCTGAACTGTTAGCTAAATTATGATGGCATTGTCATTAACTACATAAAATCTTGTAGTTCTGTAAACAGAGCAACTATCTTGTGAACATGCCATTTTATGAGGTAGAAGTTGCCACGAATGTGAATTGTGTGCGATGAATAAGCATGAAACTCGAAAAGAAAATTAAAAAAATTGTTTGTTGTTGATTTAGTTTTAGTTTTTTTTGGAGCTGTCAATGTCCTGTTGTAAGCATCTAAATGAACATTTTGTTACTTGCAACATGATTTTAAGATTTACATTGTTCCTCTGAGCTCTGCGTTAATTTACCTCACTCTCAGTAGTCCTTTTTTATCCTTCATGACAAATCTTTTATCACTGGCGTTGGGACTAATATTTATGAGATTATCCTTGTCATGGCCTTACTGTTTTCTTTTCATCAAAAGTTGAAGCAATGAGCCACTACAAACATCTACTTGCTGCATAGTTGATTTAGTTAAAATAAATATGTAACCCAGACATGGTGTTCCTTAGGATCATCTTTTACTCTCTTGTAACAGCCCAAGCTCACCGCTAGCATATATTGTCCTCTTTGGGCTTTCCCTTTTGGGCTTCCCCTCAAGGTTTTTAAAACGAGTGCCAGTGAGGAGAAGGGAACGAGTGCCAGCGAAGATGCTGGGCCCCATGGATTGTGAGATCTCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAAACGTGTTTTAAAAACTTTTAAAAGAAACCCGAAAGGAAAAGCCCAAAGAGGACAATATTTGCTAGCGGTGGGCTTGGCTTGGGCTGTTACATCTCTTCTCATTGATGCTGACATGACATCTTCCCAAGGTTAAAGCAAAGATTATCCTGCTGAATACAGTTAAGTGCATTTTAGTTGGGATCTGGCTGGAAGGATATGGGGGAAAGTTAGACTATTGAAAGGAATTCCTCCACTTCACGGGAGTAAATTGTTTTTGTTTGCCCTTCTTGGGTTTATTTGTATAACCCTGTCTGTAACTGTGATCTTTCCTTGGCTTGCACCAATTGGAGGAGTTTCTTATAACTCCTGATTCTTATGGGCTTGTTATTTTACGAATGAAATTGTTTCTAGTTGAAAGAAAGTATGCAAGTATAGCCATGACCTGTCTCTAATAGGTCATTAGTTTGTAATTGTATATATCACATCAGTATTTCGCCGCCAAGTTTGAAGGTTCCTTCTCCCTATTTTAGCTGAGAATTATTGATAAAATCACTTTTATAGTTGAGACTCATTGGTCGAAATATGGGTTCCTTGCGATATGGTTGCAGGATGTAGTAGCCAAAATTTTGTCATACTCACAGCAAGGAACACGAACTGCCTTTATTCTCTCTGCAAATGGTACCATCAGTAATGCTACCCTTAGACACTCGGCATCGTCTGGTGGTTCTGTGACATATAAGGTACTTCTATTTTTTGTTGTATTGCCTTACTGGTTGACTTTCTGCATGGATATGATTACAAATGTCTTTCTGTATTAAGCATTTGCCTTCTTGAATTAGTCATTAACTCATGTAAACTTGAAGCCTTCGATTGTACTCCAATATGATAGCGCTGTTTAAACAACTACATGAACCTTGGATAGTGGATAGGCAAATGGAAAAGAATTGTGCAATTTTTAGTGGTACTCAAGTTAGTATATAACATTTGTTTGCAATAGATTTTGTAGAGAATCAGTGACTCATAGGCAGTGTTTCTAAGGTCAGGAGCCACATGTGCCTACAAAGAGCATTTGCTTGGGCTATCATCTTAGTCACCTTTTCTATCACCATTGGCACTGTAGTGATGTAAAGGCCCAAATCTTTTTTCTATGTTTAATAAACTTCTTAAATGATCCTATTCTATTTCTATCTCTGAGATTCCACACCACATCGGTTGGGAGAGGAGAACGAAACACTCTTTATAAGGGTGTGAAACCTCTCCCTAACAGCGCGTTTTAAAATCCTTGAGGAGAAGCCCAAAAGGGAAATCACAAAGAGGACAATATCTACTAGCGGTGGGCTTGATGTTACTGAAAATAAAAGAATTATCAAAACTTAAAAAAAAAAAAAATGTATGTGTTAGGAGGCCAAATCATCTATCATTATGTTATCATGTATTCTAATCATTGCTGTAGAACTGATTTTTCTATTTAGAAAAATTCACTTTACTTGGCTCAAGTGCATTTACTCTTGTGCCTCCCCTGGGCTTAGCAATAAATTTGTCATGAATAAGTGACCTGAGCTTTCTGAACCCGACAATGAATATAAGGATCCTTACTGGATTCTTGCAGTGAATTGAGAACCTTTCTGATAATTTTCCAGATTTGAAGTAATTACTTTTCTTTGTTTATATGATTAAGAATTAAGCCAAGGTTGAAGGAAAGAAATACTCCCTATGGTAAATAAACTAAAAAGGAAAGAAAATAAAGGAGAGGATATTTACAAGATGGAGACATAAAAGAAAAAAGGGATTGGTCGATGTGAGGATCGGTCGAGTAGCCTATCTTGGAATTGCTTTCAACAGTCTTATGAAATGGCATGTCCTCGATATTAGTAATCACGTATCTCCACAATGGTATATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTCGGGCTTCCCCAAAAGACCTCGTACCAATGGAGATGTATTCTTTACTTATAAACTCATTATCATTTCCTAAATTAGCCAACGTAGGACAACAATCCTCAACACTCCGTCCACAAAGAAGAGCTAAGAAATGGAAGGAGTAAAAAGGGAACAACTAGTATAGGACTTGAACTCCTATACAATTAATCTTTCCACTGGAAATTAAATCACTGATAACCATAAAATTTGGAAGTATAGACTGTATGAAAATGTAAGACCATGATATTATGTATGGAGTTTAATACAAACAAATGCAAATGGAATAGGTTTTGCTCATTCGGGGACGTGGTTACGCAACCTTATACAGATGATTGAGTTTGTCTAATCTCTTGCAGGGCCAGTTTGAGATCATCTCTCTGTCAGGCCCCATTTTGCCCTTGGAGAACAATGAAACTGGAAGTAGAACAGGTGGTTTGAATGTGCTCCTGGCTGGGTCAGATGGACAGGTTCTTGGTGGTGGTGTTGCAGGAATGCTCATGGCAGGTTCTCAAGTACAGGTAACCCTTATCCCTCAGATCTTCCATCCGACGCCGTTTATAGGCATCGTGTACGTGTAGGATAAACAAAAACATACTTCACAAATCATTCTTTACAAATCTCTGATCGAATTCCATCCCCTCAGGTGATTGTGGGAAATTTTCTGGAGGATGATAAAAATTTCAACACCACAAGTATGCTGAATTCTGGATCGTCTTCTGCCCCATTACAAATGATGAACTTTGGTGGTGGTGGTGGTGGTGGTGATGCAGCATCGTCGTCATCAGCAGTAGCAGCAGCAGCAGCAGCCAGCCCTCGGTCGTTAGGGGCATCGAGCGGGGAGTCGTCTGCTGAAAATGGAGAGAGCCCTCTTAATAATAGGCATCCTGGAATGTTCAATAATAATAATAATAATACCAGCCAGCCGATGCACAATAATAATCAGATGTACCACCAATTATGGTCAGGCCAAACGCAGCAGTGAGGCTTTGTGTTTGCAACTAACAGTGAAGTGCTCATCGTTTTTGTGAATCTAACTTCCGCTCTTAA

mRNA sequence

ATGGATTCACGTGATACTCCACCTCCACCACTTTCTGCACCGTCCAACATGGCGATCGGAGGACCGTCGGCGTATTCAACCGCCATGACCAATGCCAACAACAATGCCTCTTCCAATATGGCTCTCTTTCCGCCTACCTCTCAGATGATGCCTCCTTCTGCGCGATTTCCGTTCAAGTCTGTGATCTCCCCTGCATCCCTGCATTTGGATTCTATGAACGCTTCTCCTTACGACGGAACGCATTCCGGAAATTTCAATGTCGATTCCGGAAAGAAAAGGAGGGGCCGGCCGAGGAAGTACGATCCTGATGGTAATATCATCGCCTTGGGTTTGGCACCTACCACTGTTGTTACCTCTTCTGTTGTGCACGGGGATTTGAGCGCTACTCCTGATTTGGAGCAGCCGGTCAGGAAACCGAGGGGAAGGCCGCGGGGCTCTGGAAAGAAACAGACGAATGCTCTTGGTTCAAGCGGCACTAGTTTTACTCCTTACGCCGTATTGGCGAAGCCTGGAGAGGATGTAGTAGCCAAAATTTTGTCATACTCACAGCAAGGAACACGAACTGCCTTTATTCTCTCTGCAAATGGTACCATCAGTAATGCTACCCTTAGACACTCGGCATCGTCTGGTGGTTCTGTGACATATAAGGGCCAGTTTGAGATCATCTCTCTGTCAGGCCCCATTTTGCCCTTGGAGAACAATGAAACTGGAAGTAGAACAGGTGGTTTGAATGTGCTCCTGGCTGGGTCAGATGGACAGGTTCTTGGTGGTGGTGTTGCAGGAATGCTCATGGCAGGTTCTCAAGTACAGGTGATTGTGGGAAATTTTCTGGAGGATGATAAAAATTTCAACACCACAAGTATGCTGAATTCTGGATCGTCTTCTGCCCCATTACAAATGATGAACTTTGGTGGTGGTGGTGGTGGTGGTGATGCAGCATCGTCGTCATCAGCAGTAGCAGCAGCAGCAGCAGCCAGCCCTCGGTCGTTAGGGGCATCGAGCGGGGAGTCGTCTGCTGAAAATGGAGAGAGCCCTCTTAATAATAGGCATCCTGGAATGTTCAATAATAATAATAATAATACCAGCCAGCCGATGCACAATAATAATCAGATGTACCACCAATTATGGTCAGGCCAAACGCAGCAGTGAGGCTTTGTGTTTGCAACTAACAGTGAAGTGCTCATCGTTTTTGTGAATCTAACTTCCGCTCTTAA

Coding sequence (CDS)

ATGGATTCACGTGATACTCCACCTCCACCACTTTCTGCACCGTCCAACATGGCGATCGGAGGACCGTCGGCGTATTCAACCGCCATGACCAATGCCAACAACAATGCCTCTTCCAATATGGCTCTCTTTCCGCCTACCTCTCAGATGATGCCTCCTTCTGCGCGATTTCCGTTCAAGTCTGTGATCTCCCCTGCATCCCTGCATTTGGATTCTATGAACGCTTCTCCTTACGACGGAACGCATTCCGGAAATTTCAATGTCGATTCCGGAAAGAAAAGGAGGGGCCGGCCGAGGAAGTACGATCCTGATGGTAATATCATCGCCTTGGGTTTGGCACCTACCACTGTTGTTACCTCTTCTGTTGTGCACGGGGATTTGAGCGCTACTCCTGATTTGGAGCAGCCGGTCAGGAAACCGAGGGGAAGGCCGCGGGGCTCTGGAAAGAAACAGACGAATGCTCTTGGTTCAAGCGGCACTAGTTTTACTCCTTACGCCGTATTGGCGAAGCCTGGAGAGGATGTAGTAGCCAAAATTTTGTCATACTCACAGCAAGGAACACGAACTGCCTTTATTCTCTCTGCAAATGGTACCATCAGTAATGCTACCCTTAGACACTCGGCATCGTCTGGTGGTTCTGTGACATATAAGGGCCAGTTTGAGATCATCTCTCTGTCAGGCCCCATTTTGCCCTTGGAGAACAATGAAACTGGAAGTAGAACAGGTGGTTTGAATGTGCTCCTGGCTGGGTCAGATGGACAGGTTCTTGGTGGTGGTGTTGCAGGAATGCTCATGGCAGGTTCTCAAGTACAGGTGATTGTGGGAAATTTTCTGGAGGATGATAAAAATTTCAACACCACAAGTATGCTGAATTCTGGATCGTCTTCTGCCCCATTACAAATGATGAACTTTGGTGGTGGTGGTGGTGGTGGTGATGCAGCATCGTCGTCATCAGCAGTAGCAGCAGCAGCAGCAGCCAGCCCTCGGTCGTTAGGGGCATCGAGCGGGGAGTCGTCTGCTGAAAATGGAGAGAGCCCTCTTAATAATAGGCATCCTGGAATGTTCAATAATAATAATAATAATACCAGCCAGCCGATGCACAATAATAATCAGATGTACCACCAATTATGGTCAGGCCAAACGCAGCAGTGA

Protein sequence

MDSRDTPPPPLSAPSNMAIGGPSAYSTAMTNANNNASSNMALFPPTSQMMPPSARFPFKSVISPASLHLDSMNASPYDGTHSGNFNVDSGKKRRGRPRKYDPDGNIIALGLAPTTVVTSSVVHGDLSATPDLEQPVRKPRGRPRGSGKKQTNALGSSGTSFTPYAVLAKPGEDVVAKILSYSQQGTRTAFILSANGTISNATLRHSASSGGSVTYKGQFEIISLSGPILPLENNETGSRTGGLNVLLAGSDGQVLGGGVAGMLMAGSQVQVIVGNFLEDDKNFNTTSMLNSGSSSAPLQMMNFGGGGGGGDAASSSSAVAAAAAASPRSLGASSGESSAENGESPLNNRHPGMFNNNNNNTSQPMHNNNQMYHQLWSGQTQQ

Homology

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BLAST of CmoCh19G002560.1 vs. ExPASy Swiss-Prot
Match: Q9FIR1 (AT-hook motif nuclear-localized protein 8 OS=Arabidopsis thaliana OX=3702 GN=AHL8 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.2e-44
Identity = 156/421 (37.05%), Postives = 219/421 (52.02%), Query Frame = 0


Query: 1   MDSRDTPPP--PLSAPSNMAIGGPSAYSTAMTNANNNASSNMALFPPTSQMMPPSARFPF 60
           MDSRD PP    L  P  M +   S Y       N NA+++  + P ++       R PF
Sbjct: 1   MDSRDIPPSHNQLQPPPGMLM---SHY------RNPNAAASPLMVPTSTSQPIQHPRLPF 60

Query: 61  KSVISPASLH-----------LDSMNASPYDGTHSG---NFNVDSG------KKRRGRPR 120
            +     + H           L+S+     DG+ S     F +D        KK+RGRPR
Sbjct: 61  GNQQQSQTFHQQQQQQMDQKTLESLGFG--DGSPSSQPMRFGIDDQNQQLQVKKKRGRPR 120

Query: 121 KYDPDGNIIALGLAPTTVVTSSVVH-------GDLSATPD-LEQPVRKPRGRPRGSGKKQ 180
           KY PDG+ IALGLAPT+ + S+  +       GD     + ++ PV++ RGRP GS KKQ
Sbjct: 121 KYTPDGS-IALGLAPTSPLLSAASNSYGEGGVGDSGGNGNSVDPPVKRNRGRPPGSSKKQ 180

Query: 181 TNAL-GSSGTSFTPYAVLAKPGEDVVAKILSYSQQGTRTAFILSANGTISNATLRHSASS 240
            +AL G+SG  FTP+ +    GED+ +K++++S QG+RT  ILSA+G +S   LR ++ S
Sbjct: 181 LDALGGTSGVGFTPHVIEVNTGEDIASKVMAFSDQGSRTICILSASGAVSRVMLRQASHS 240

Query: 241 GGSVTYKGQFEIISLSGPILPLENNETGSRTGGLNVLLAGSDGQVLGGGVAGMLMAGSQV 300
            G VTY+G+FEII+LSG +L  E N + +R+G L+V LAG DG ++GG V G L+A +QV
Sbjct: 241 SGIVTYEGRFEIITLSGSVLNYEVNGSTNRSGNLSVALAGPDGGIVGGSVVGNLVAATQV 300

Query: 301 QVIVGNFLEDDK-----NFNTTSMLNSGSSSAPLQMMNFGGGGGGGDAASSSSAVAAAAA 360
           QVIVG+F+ + K     + N     N   +SAP  M+NFG    G               
Sbjct: 301 QVIVGSFVAEAKKPKQSSVNIARGQNPEPASAPANMLNFGSVSQG--------------- 360

Query: 361 ASPRSLGASSGESSAEN-GESPLNNR--HPGMFNNNNNNTSQPMH-NNNQMYHQLWSGQT 382
                    S ESS EN   SP  +R  + G++        QP+H +  QMY  LWS   
Sbjct: 361 --------PSSESSEENESGSPAMHRDNNNGIYGAQQQQQQQPLHPHQMQMYQHLWSNHG 386

[Close]

BLAST of CmoCh19G002560.1 vs. ExPASy Swiss-Prot
Match: Q940I0 (AT-hook motif nuclear-localized protein 13 OS=Arabidopsis thaliana OX=3702 GN=AHL13 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.6e-43
Identity = 158/421 (37.53%), Postives = 220/421 (52.26%), Query Frame = 0


Query: 7   PPPPLSAPSNMAIGGPSAYSTAMTNANNNASSNMALFPPTSQMMPP--SARFPFKSVISP 66
           PP  L +  N     P+A +  +   N + S  M    P    M P    +  +      
Sbjct: 34  PPGMLMSHHNSYNRNPNAAAAVLMGHNTSTSQAMHQRLPFGGSMSPHQPQQHQYHHPQPQ 93

Query: 67  ASLHLDSMNASPYDGT---------HSGNFNVD--SGKKRRGRPRKYDPD-------GNI 126
             +   ++ +  +DG+         HS  F +D    KK+RGRPRKY  D       G+ 
Sbjct: 94  QQIDQKTLESLGFDGSPSSVAATQQHSMRFGIDHQQVKKKRGRPRKYAADGGGGGGGGSN 153

Query: 127 IALGLAPTTVVTSSVVH----------GDLSA--TPDLEQPVRKPRGRPRGSGKKQTNAL 186
           IALGLAPT+ + S+             GD +       + P ++ RGRP GSGKKQ +AL
Sbjct: 154 IALGLAPTSPLPSASNSYGGGNEGGGGGDSAGANANSSDPPAKRNRGRPPGSGKKQLDAL 213

Query: 187 -GSSGTSFTPYAVLAKPGEDVVAKILSYSQQGTRTAFILSANGTISNATLRHSASSG--G 246
            G+ G  FTP+ +  K GED+  KIL+++ QG R   ILSA G ++N  LR + +S   G
Sbjct: 214 GGTGGVGFTPHVIEVKTGEDIATKILAFTNQGPRAICILSATGAVTNVMLRQANNSNPTG 273

Query: 247 SVTYKGQFEIISLSGPILPLENNETGSRTGGLNVLLAGSDGQVLGGGVAGMLMAGSQVQV 306
           +V Y+G+FEIISLSG  L  E+N T ++TG L+V LAG +G+++GG V GML+AGSQVQV
Sbjct: 274 TVKYEGRFEIISLSGSFLNSESNGTVTKTGNLSVSLAGHEGRIVGGCVDGMLVAGSQVQV 333

Query: 307 IVGNFLEDDKNFNTTSMLNSGS---SSAPLQMMNFGGGGGGGDAASSSSAVAAAAAASPR 366
           IVG+F+ D +    ++     +   +SAP  M++FGG GG G               SPR
Sbjct: 334 IVGSFVPDGRKQKQSAGRAQNTPEPASAPANMLSFGGVGGPG---------------SPR 393

Query: 367 SLGAS-SGESSAEN-GESPLNNRHPGMFNNNN----NNTSQPMHN-NNQMYHQLWSGQTQ 383
           S G   S ESS EN   SPL+ R     +NN+    N+T QP+H    QMY  LW G + 
Sbjct: 394 SQGQQHSSESSEENESNSPLHRRSNNNNSNNHGIFGNSTPQPLHQIPMQMYQNLWPGNSP 439

[Close]

BLAST of CmoCh19G002560.1 vs. ExPASy Swiss-Prot
Match: O22812 (AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana OX=3702 GN=AHL10 PE=1 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 5.9e-38
Identity = 131/354 (37.01%), Postives = 179/354 (50.56%), Query Frame = 0


Query: 17  MAIGGPSAYSTAMTNANNN------ASSNMALFPPTSQMMPPSARFPFKSVISPASLHLD 76
           MA+     +S A    + N           AL+    + + P  ++   S    + L+++
Sbjct: 20  MALHQQQQHSQAQPQQSQNRPLSFGGDDGTALYKQPMRSVSPPQQYQPNSAGENSVLNMN 79

Query: 77  SMNASPYDGTHSGNFNVDSGKKRRGRPRKYDPDGNIIALGL---APTTVVTSSVVHGDLS 136
                    T +G+  V   KKRRGRPRKY PD   ++LGL   AP+  V+     GD  
Sbjct: 80  LPGGESGGMTGTGSEPV---KKRRGRPRKYGPDSGEMSLGLNPGAPSFTVSQPSSGGDGG 139

Query: 137 ATPDLEQPVRKPRGRPRGSGKK--QTNALGSSGTSFTPYAVLAKPGEDVVAKILSYSQQG 196
                     K RGRP GS  K  +  ALGS+G  FTP+ +    GEDV +KI++ +  G
Sbjct: 140 ---------EKKRGRPPGSSSKRLKLQALGSTGIGFTPHVLTVLAGEDVSSKIMALTHNG 199

Query: 197 TRTAFILSANGTISNATLRHSASSGGSVTYKGQFEIISLSGPILPLENNETGSRTGGLNV 256
            R   +LSANG ISN TLR SA+SGG+VTY+G+FEI+SLSG    LENN   SRTGGL+V
Sbjct: 200 PRAVCVLSANGAISNVTLRQSATSGGTVTYEGRFEILSLSGSFHLLENNGQRSRTGGLSV 259

Query: 257 LLAGSDGQVLGGGVAGMLMAGSQVQVIVGNFLEDDKNFNTTSMLNSGSSSAPLQMMNFGG 316
            L+  DG VLGG VAG+L+A S VQ++VG+FL D +      +   G SS  L  +    
Sbjct: 260 SLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLPDGEKEPKQHVGQMGLSSPVLPRV---- 319

Query: 317 GGGGGDAASSSSAVAAAAAASPRSLGASSGESSAENGESPLNNRHPGMFNNNNN 360
                     +        +SP+S G  S  S      SP++    G +NN  N
Sbjct: 320 ----------APTQVLMTPSSPQSRGTMSESSCGGGHGSPIHQSTGGPYNNTIN 347

[Close]

BLAST of CmoCh19G002560.1 vs. ExPASy Swiss-Prot
Match: Q8VYJ2 (AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL1 PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.7e-37
Identity = 112/297 (37.71%), Postives = 164/297 (55.22%), Query Frame = 0


Query: 22  PSAYSTAMTNANNNASSNMALFPPTSQMMPPSARFPFKSVISPASLHLDSMNASPYDGTH 81
           PS +  A  + ++N S       PTS   PP    P     +P  L + ++  +      
Sbjct: 30  PSDFHVAQRSESSNQS-------PTSVTPPPPQ--PSSHHTAPPPLQISTVTTTTTTAAM 89

Query: 82  SGNFNVDSG--KKRRGRPRKYDPDGNIIALGLAP-TTVVTSSVVHGDLSATPDLEQPVRK 141
            G   +  G  KK+RGRPRKY PDG ++AL   P ++    S +    S   D     ++
Sbjct: 90  EG---ISGGLMKKKRGRPRKYGPDGTVVALSPKPISSAPAPSHLPPPSSHVIDFSASEKR 149

Query: 142 PRGRPRGSGKK-----QTNALG-----SSGTSFTPYAVLAKPGEDVVAKILSYSQQGTRT 201
            + +P  S  +     Q   LG     S G +FTP+ +    GEDV  KI+S+SQQG R+
Sbjct: 150 SKVKPTNSFNRTKYHHQVENLGEWAPCSVGGNFTPHIITVNTGEDVTMKIISFSQQGPRS 209

Query: 202 AFILSANGTISNATLRHSASSGGSVTYKGQFEIISLSGPILPLENNETGSRTGGLNVLLA 261
             +LSANG IS+ TLR   SSGG++TY+G+FEI+SLSG  +P ++  T SRTGG++V LA
Sbjct: 210 ICVLSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDSGGTRSRTGGMSVSLA 269

Query: 262 GSDGQVLGGGVAGMLMAGSQVQVIVGNFL-------EDDKNFNTTSMLNSGSSSAPL 299
             DG+V+GGG+AG+L+A S VQV+VG+FL       +  K      ML+S +++ P+
Sbjct: 270 SPDGRVVGGGLAGLLVAASPVQVVVGSFLAGTDHQDQKPKKNKHDFMLSSPTAAIPI 314

[Close]

BLAST of CmoCh19G002560.1 vs. ExPASy Swiss-Prot
Match: Q9SB31 (AT-hook motif nuclear-localized protein 3 OS=Arabidopsis thaliana OX=3702 GN=AHL3 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.8e-35
Identity = 110/286 (38.46%), Postives = 152/286 (53.15%), Query Frame = 0


Query: 30  TNANNNASSNMALFPP---------TSQMMPPSARFPFKSVISPASL--------HLDSM 89
           TN NNN +S+  L             S   PP    P   ++ P ++         +   
Sbjct: 7   TNINNNITSSFGLKQQHEAAASDGGYSMDPPPRPENPNPFLVPPTTVPAAATVAAAVTEN 66

Query: 90  NASPYDGT-HSGNFNVDSGKKRRGRPRKYDPDGNIIALGLAPTTVVTSSVVHGDLSATPD 149
            A+P+  T  + N + +  KK+RGRPRKY+PDG         T VVT S +    S    
Sbjct: 67  AATPFSLTMPTENTSAEQLKKKRGRPRKYNPDG---------TLVVTLSPMPISSSVPLT 126

Query: 150 LEQPVRKPRGRPRGSGKK---------------QTNALGSS-----GTSFTPYAVLAKPG 209
            E P RK RGR RG   +                TN  G       G +FTP+ ++   G
Sbjct: 127 SEFPPRK-RGRGRGKSNRWLKKSQMFQFDRSPVDTNLAGVGTADFVGANFTPHVLIVNAG 186

Query: 210 EDVVAKILSYSQQGTRTAFILSANGTISNATLRHSASSGGSVTYKGQFEIISLSGPILPL 269
           EDV  KI+++SQQG+R   ILSANG ISN TLR S +SGG++TY+G+FEI+SL+G  +  
Sbjct: 187 EDVTMKIMTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYEGRFEILSLTGSFMQN 246

Query: 270 ENNETGSRTGGLNVLLAGSDGQVLGGGVAGMLMAGSQVQVIVGNFL 278
           ++  T SR GG++V LAG DG+V GGG+AG+ +A   VQV+VG F+
Sbjct: 247 DSGGTRSRAGGMSVCLAGPDGRVFGGGLAGLFLAAGPVQVMVGTFI 282

[Close]

BLAST of CmoCh19G002560.1 vs. ExPASy TrEMBL
Match: A0A6J1HG92 (AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC111463805 PE=4 SV=1)

HSP 1 Score: 716.5 bits (1848), Expect = 6.1e-203
Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 0


Query: 1   MDSRDTPPPPLSAPSNMAIGGPSAYSTAMTNANNNASSNMALFPPTSQMMPPSARFPFKS 60
           MDSRDTPPPPLSAPSNMAIGGPSAYSTAMTNANNNASSNMALFPPTSQMMPPSARFPFKS
Sbjct: 1   MDSRDTPPPPLSAPSNMAIGGPSAYSTAMTNANNNASSNMALFPPTSQMMPPSARFPFKS 60

Query: 61  VISPASLHLDSMNASPYDGTHSGNFNVDSGKKRRGRPRKYDPDGNIIALGLAPTTVVTSS 120
           VISPASLHLDSMNASPYDGTHSGNFNVDSGKKRRGRPRKYDPDGNIIALGLAPTTVVTSS
Sbjct: 61  VISPASLHLDSMNASPYDGTHSGNFNVDSGKKRRGRPRKYDPDGNIIALGLAPTTVVTSS 120

Query: 121 VVHGDLSATPDLEQPVRKPRGRPRGSGKKQTNALGSSGTSFTPYAVLAKPGEDVVAKILS 180
           VVHGDLSATPDLEQPVRKPRGRPRGSGKKQTNALGSSGTSFTPYAVLAKPGEDVVAKILS
Sbjct: 121 VVHGDLSATPDLEQPVRKPRGRPRGSGKKQTNALGSSGTSFTPYAVLAKPGEDVVAKILS 180

Query: 181 YSQQGTRTAFILSANGTISNATLRHSASSGGSVTYKGQFEIISLSGPILPLENNETGSRT 240
           YSQQGTRTAFILSANGTISNATLRHSASSGGSVTYKGQFEIISLSGPILPLENNETGSRT
Sbjct: 181 YSQQGTRTAFILSANGTISNATLRHSASSGGSVTYKGQFEIISLSGPILPLENNETGSRT 240

Query: 241 GGLNVLLAGSDGQVLGGGVAGMLMAGSQVQVIVGNFLEDDKNFNTTSMLNSGSSSAPLQM 300
           GGLNVLLAGSDGQVLGGGVAGMLMAGSQVQVIVGNFLEDDKNFNTTSMLNSGSSSAPLQM
Sbjct: 241 GGLNVLLAGSDGQVLGGGVAGMLMAGSQVQVIVGNFLEDDKNFNTTSMLNSGSSSAPLQM 300

Query: 301 MNFGGGGGGGDAASSSSAVAAAAAASPRSLGASSGESSAENGESPLNNRHPGMFNNNNNN 360
           MNFGGGGGGGDAASSSSAVAAAAAASPRSLGASSGESSAENGESPLNNRHPGMFNNNNNN
Sbjct: 301 MNFGGGGGGGDAASSSSAVAAAAAASPRSLGASSGESSAENGESPLNNRHPGMFNNNNNN 360

Query: 361 TSQPMHNNNQMYHQLWSGQTQQ 383
           TSQPMHNNNQMYHQLWSGQTQQ
Sbjct: 361 TSQPMHNNNQMYHQLWSGQTQQ 382

[Close]

BLAST of CmoCh19G002560.1 vs. ExPASy TrEMBL
Match: A0A6J1HUU4 (AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111467026 PE=4 SV=1)

HSP 1 Score: 677.9 bits (1748), Expect = 2.4e-191
Identity = 366/382 (95.81%), Postives = 368/382 (96.34%), Query Frame = 0


Query: 1   MDSRDTPPPPLSAPSNMAIGGPSAYSTAMTNANNNASSNMALFPPTSQMMPPSARFPFKS 60
           MDSRDTPPPPLSAPSNMAIGGPSAYSTAM NANNNASSNMALFPPTSQMMPPSARFPFKS
Sbjct: 1   MDSRDTPPPPLSAPSNMAIGGPSAYSTAMNNANNNASSNMALFPPTSQMMPPSARFPFKS 60

Query: 61  VISPASLHLDSMNASPYDGTHSGNFNVDSGKKRRGRPRKYDPDGNIIALGLAPTTVVTSS 120
           VISPASLHLDSMNASPYDGTHSGNFNVDSGKKRRGRPRKYDPDGNIIALGLAP TVVTSS
Sbjct: 61  VISPASLHLDSMNASPYDGTHSGNFNVDSGKKRRGRPRKYDPDGNIIALGLAPNTVVTSS 120

Query: 121 VVHGDLSATPDLEQPVRKPRGRPRGSGKKQTNALGSSGTSFTPYAVLAKPGEDVVAKILS 180
           VVHGDLS TPDLEQP RKPRGRPRGSGKKQTNALGSSGTSFTPYAVLAKPGEDVVAK+LS
Sbjct: 121 VVHGDLSVTPDLEQPARKPRGRPRGSGKKQTNALGSSGTSFTPYAVLAKPGEDVVAKLLS 180

Query: 181 YSQQGTRTAFILSANGTISNATLRHSASSGGSVTYKGQFEIISLSGPILPLENNETGSRT 240
           YSQ G RTAFILSANGTISNATLRHSA SGGSVTYKGQFEIISLSGPI PLENNETGSRT
Sbjct: 181 YSQPGPRTAFILSANGTISNATLRHSALSGGSVTYKGQFEIISLSGPIFPLENNETGSRT 240

Query: 241 GGLNVLLAGSDGQVLGGGVAGMLMAGSQVQVIVGNFLEDDKNFNTTSMLNSGSSSAPLQM 300
           GGLNVLLAGSDGQVLGGGVAGMLMAGSQVQVIVGNFLEDDKNFNTT MLNSGSSSAPLQM
Sbjct: 241 GGLNVLLAGSDGQVLGGGVAGMLMAGSQVQVIVGNFLEDDKNFNTTRMLNSGSSSAPLQM 300

Query: 301 MNFGGGGGGGDAASSSSAVAAAAAASPRSLGASSGESSAENGESPLNNRHPGMFNNNNNN 360
           MNF   GGGGDAASSSSAVAAAAAASP SLGASSG+SSAENGESPLNNRHPGMF NNNNN
Sbjct: 301 MNF---GGGGDAASSSSAVAAAAAASPGSLGASSGDSSAENGESPLNNRHPGMF-NNNNN 360

Query: 361 TSQPMHNNNQMYHQLWSGQTQQ 383
           TSQPMHNNNQMYHQLWSGQTQQ
Sbjct: 361 TSQPMHNNNQMYHQLWSGQTQQ 378

[Close]

BLAST of CmoCh19G002560.1 vs. ExPASy TrEMBL
Match: A0A6J1K244 (AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111491025 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 1.2e-137
Identity = 281/382 (73.56%), Postives = 315/382 (82.46%), Query Frame = 0


Query: 1   MDSRDTPPPPLSAPSNMAIGGPSAYSTAMTNANNNASSNMALFPPTSQMMPPSARFPFKS 60
           MDS DT PP LSAPSNM +G P+AYS  M+NANNNASS + L P T+QM+PPSARFPF S
Sbjct: 1   MDSLDT-PPSLSAPSNMTVGVPTAYSPGMSNANNNASSTLGLNPATAQMIPPSARFPFNS 60

Query: 61  VISPASLHLDSMNASPYDGTHSGNFNVDSGKKRRGRPRKYDPDGNIIALGLAPTTVVTSS 120
           VI+PAS+ LDSMN SPYDG+HSG+FN DSGKK+RGRPRKY PDGN IALGLAPTT + SS
Sbjct: 61  VIAPASVPLDSMNVSPYDGSHSGSFNADSGKKKRGRPRKYTPDGN-IALGLAPTT-MASS 120

Query: 121 VVHGDLSATPDLEQPVRKPRGRPRGSGKKQTNALGSSGTSFTPYAVLAKPGEDVVAKILS 180
           V HGDLS TPDLEQP +K RGRP GSGKKQ NA+GSSG  FTP+ V AKPGEDV AKIL+
Sbjct: 121 VGHGDLSGTPDLEQPAKKARGRPPGSGKKQMNAIGSSGVGFTPHVVWAKPGEDVAAKILA 180

Query: 181 YSQQGTRTAFILSANGTISNATLRHSASSGGSVTYKGQFEIISLSGPILPLENNETGSRT 240
           +SQQG RT FILSANG+ISNATLRHS +SGGSVTY+GQ+EIISLSG  +  ENN T SRT
Sbjct: 181 FSQQGPRTVFILSANGSISNATLRHSMTSGGSVTYEGQYEIISLSGSFMLSENNGTRSRT 240

Query: 241 GGLNVLLAGSDGQVLGGGVAGMLMAGSQVQVIVGNFLEDDKNFNTTSMLNSGSSSAPLQM 300
           GGL+VLLAGSDGQVLGGGVAGMLMA SQVQV+VG+FLE+DK  N T MLNSGSS++P QM
Sbjct: 241 GGLSVLLAGSDGQVLGGGVAGMLMASSQVQVVVGSFLENDKKSNNTGMLNSGSSASPSQM 300

Query: 301 MNFGGGGGGGDAASSSSAVAAAAAASPRSLGASSGESSAENGESPLNNRHPGMFNNNNNN 360
           +NFGG              AAAAAASP SLGASSGESSA+NG SPLNNRHPGMF    +N
Sbjct: 301 INFGG-------------AAAAAAASPPSLGASSGESSADNGGSPLNNRHPGMF----SN 360

Query: 361 TSQPMHNNNQMYHQLWSGQTQQ 383
           +SQP+H N QMYHQLW+GQTQQ
Sbjct: 361 SSQPIH-NMQMYHQLWAGQTQQ 361

[Close]

BLAST of CmoCh19G002560.1 vs. ExPASy TrEMBL
Match: A0A1S3CQG0 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103503537 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 1.2e-137
Identity = 287/383 (74.93%), Postives = 317/383 (82.77%), Query Frame = 0


Query: 1   MDSRDTPPPPLSAPSNMAIGGPSAYSTAMTNANNNASSNMALFPPTSQMMPPSARFPFK- 60
           MDS DTPPPPLSAPSNMAIGG +AYS     ANNNASS +AL  P++QM+PPS+RFPF  
Sbjct: 1   MDSLDTPPPPLSAPSNMAIGGQTAYSP----ANNNASSTIALNQPSAQMIPPSSRFPFNH 60

Query: 61  SVISPASLHLDSMNASPYDGTHSGNFNVDSGKKRRGRPRKYDPDGNIIALGLAPTTVVTS 120
            VI P+S+ LDS+N SPYDG+HS NFNVDSGKKRRGRPRKY PD N IALGLAPT  V S
Sbjct: 61  PVIPPSSVPLDSLNVSPYDGSHSANFNVDSGKKRRGRPRKYAPDANNIALGLAPTPTVGS 120

Query: 121 SVVHGDLSATPDLEQPVRKPRGRPRGSGKKQTNALGSSGTSFTPYAVLAKPGEDVVAKIL 180
           SV HGDLSATPD EQP RK RGRP GSGKKQ+N++GS GT FTP+ +LAKPGEDV AKIL
Sbjct: 121 SVPHGDLSATPDSEQPARKTRGRPPGSGKKQSNSIGSGGTGFTPHVLLAKPGEDVAAKIL 180

Query: 181 SYSQQGTRTAFILSANGTISNATLRHSASSGGSVTYKGQFEIISLSGPILPLENNETGSR 240
           S+SQQG RT FILSANGT+SNATLRHSASSGGSV+Y+G ++IISLSG  L  ENN T SR
Sbjct: 181 SFSQQGPRTVFILSANGTLSNATLRHSASSGGSVSYEGHYDIISLSGSFLLSENNGTRSR 240

Query: 241 TGGLNVLLAGSDGQVLGGGVAGMLMAGSQVQVIVGNFLEDDKNFNTTSMLNSGSSSAPLQ 300
           TGGL+VLLAGS+GQVLGGGVAGMLMA SQVQVIVG+FLEDDK  N TSMLNSG+SSAP Q
Sbjct: 241 TGGLSVLLAGSNGQVLGGGVAGMLMASSQVQVIVGSFLEDDKKSN-TSMLNSGTSSAPSQ 300

Query: 301 MMNFGGGGGGGDAASSSSAVAAAAAASPRSLGASSGESSAENGESPLNNRHPGMFNNNNN 360
           M+NFGGGGGGG          AAAAASP SLG SSGESS ENG+SPLNNRHPGMF    N
Sbjct: 301 MINFGGGGGGG---------LAAAAASPPSLGGSSGESSGENGDSPLNNRHPGMF----N 360

Query: 361 NTSQPMHNNNQMYHQLWSGQTQQ 383
           N+SQP+H N QMY QLW+GQTQQ
Sbjct: 361 NSSQPIH-NIQMY-QLWAGQTQQ 363

[Close]

BLAST of CmoCh19G002560.1 vs. ExPASy TrEMBL
Match: A0A0A0LED1 (AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902370 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 3.4e-137
Identity = 285/383 (74.41%), Postives = 316/383 (82.51%), Query Frame = 0


Query: 1   MDSRDTPPPPLSAPSNMAIGGPSAYSTAMTNANNNASSNMALFPPTSQMMPPSARFPFK- 60
           MDS DTPPPPLSAPSNMA+GG  AYS     ANNNASS +AL  P++QM+PPS+RFPF  
Sbjct: 1   MDSLDTPPPPLSAPSNMAVGGQPAYSP----ANNNASSTIALNQPSAQMIPPSSRFPFNH 60

Query: 61  SVISPASLHLDSMNASPYDGTHSGNFNVDSGKKRRGRPRKYDPDGNIIALGLAPTTVVTS 120
            VI P+S+ LDS+N SPYDG+HS NFNVDSGKKRRGRPRKY PD N IALGLAPT  V S
Sbjct: 61  PVIPPSSVPLDSLNVSPYDGSHSANFNVDSGKKRRGRPRKYAPDANNIALGLAPTPTVAS 120

Query: 121 SVVHGDLSATPDLEQPVRKPRGRPRGSGKKQTNALGSSGTSFTPYAVLAKPGEDVVAKIL 180
           S+ HGDL+ATPD EQP RK RGRP GSGKKQ+N++GS GT FTP+ +LAKPGEDV AKIL
Sbjct: 121 SLPHGDLTATPDSEQPARKTRGRPPGSGKKQSNSIGSGGTGFTPHVLLAKPGEDVAAKIL 180

Query: 181 SYSQQGTRTAFILSANGTISNATLRHSASSGGSVTYKGQFEIISLSGPILPLENNETGSR 240
           S+SQQG RT FILSANGT+SNATLRHSASSGGSV+Y+G ++IISLSG  L  ENN T SR
Sbjct: 181 SFSQQGPRTVFILSANGTLSNATLRHSASSGGSVSYEGHYDIISLSGSFLLSENNGTRSR 240

Query: 241 TGGLNVLLAGSDGQVLGGGVAGMLMAGSQVQVIVGNFLEDDKNFNTTSMLNSGSSSAPLQ 300
           TGGL+VLLAGS+GQVLGGGVAGMLMA SQVQVIVG+FLEDDK  N TSMLNSGSSSAP Q
Sbjct: 241 TGGLSVLLAGSNGQVLGGGVAGMLMASSQVQVIVGSFLEDDKKSN-TSMLNSGSSSAPSQ 300

Query: 301 MMNFGGGGGGGDAASSSSAVAAAAAASPRSLGASSGESSAENGESPLNNRHPGMFNNNNN 360
           M+NFGGGGGGG          AAAAASP SLG SSGESS ENG+SPLNNRHPGMF    N
Sbjct: 301 MINFGGGGGGG---------LAAAAASPPSLGGSSGESSGENGDSPLNNRHPGMF----N 360

Query: 361 NTSQPMHNNNQMYHQLWSGQTQQ 383
           N+SQP+H N QMY QLW+GQTQQ
Sbjct: 361 NSSQPIH-NLQMY-QLWAGQTQQ 363

[Close]

BLAST of CmoCh19G002560.1 vs. TAIR 10
Match: AT5G46640.1 (AT hook motif DNA-binding family protein )

HSP 1 Score: 179.5 bits (454), Expect = 5.1e-45
Identity = 156/421 (37.05%), Postives = 219/421 (52.02%), Query Frame = 0


Query: 1   MDSRDTPPP--PLSAPSNMAIGGPSAYSTAMTNANNNASSNMALFPPTSQMMPPSARFPF 60
           MDSRD PP    L  P  M +   S Y       N NA+++  + P ++       R PF
Sbjct: 1   MDSRDIPPSHNQLQPPPGMLM---SHY------RNPNAAASPLMVPTSTSQPIQHPRLPF 60

Query: 61  KSVISPASLH-----------LDSMNASPYDGTHSG---NFNVDSG------KKRRGRPR 120
            +     + H           L+S+     DG+ S     F +D        KK+RGRPR
Sbjct: 61  GNQQQSQTFHQQQQQQMDQKTLESLGFG--DGSPSSQPMRFGIDDQNQQLQVKKKRGRPR 120

Query: 121 KYDPDGNIIALGLAPTTVVTSSVVH-------GDLSATPD-LEQPVRKPRGRPRGSGKKQ 180
           KY PDG+ IALGLAPT+ + S+  +       GD     + ++ PV++ RGRP GS KKQ
Sbjct: 121 KYTPDGS-IALGLAPTSPLLSAASNSYGEGGVGDSGGNGNSVDPPVKRNRGRPPGSSKKQ 180

Query: 181 TNAL-GSSGTSFTPYAVLAKPGEDVVAKILSYSQQGTRTAFILSANGTISNATLRHSASS 240
            +AL G+SG  FTP+ +    GED+ +K++++S QG+RT  ILSA+G +S   LR ++ S
Sbjct: 181 LDALGGTSGVGFTPHVIEVNTGEDIASKVMAFSDQGSRTICILSASGAVSRVMLRQASHS 240

Query: 241 GGSVTYKGQFEIISLSGPILPLENNETGSRTGGLNVLLAGSDGQVLGGGVAGMLMAGSQV 300
            G VTY+G+FEII+LSG +L  E N + +R+G L+V LAG DG ++GG V G L+A +QV
Sbjct: 241 SGIVTYEGRFEIITLSGSVLNYEVNGSTNRSGNLSVALAGPDGGIVGGSVVGNLVAATQV 300

Query: 301 QVIVGNFLEDDK-----NFNTTSMLNSGSSSAPLQMMNFGGGGGGGDAASSSSAVAAAAA 360
           QVIVG+F+ + K     + N     N   +SAP  M+NFG    G               
Sbjct: 301 QVIVGSFVAEAKKPKQSSVNIARGQNPEPASAPANMLNFGSVSQG--------------- 360

Query: 361 ASPRSLGASSGESSAEN-GESPLNNR--HPGMFNNNNNNTSQPMH-NNNQMYHQLWSGQT 382
                    S ESS EN   SP  +R  + G++        QP+H +  QMY  LWS   
Sbjct: 361 --------PSSESSEENESGSPAMHRDNNNGIYGAQQQQQQQPLHPHQMQMYQHLWSNHG 386

[Close]

BLAST of CmoCh19G002560.1 vs. TAIR 10
Match: AT4G17950.1 (AT hook motif DNA-binding family protein )

HSP 1 Score: 177.2 bits (448), Expect = 2.6e-44
Identity = 158/421 (37.53%), Postives = 220/421 (52.26%), Query Frame = 0


Query: 7   PPPPLSAPSNMAIGGPSAYSTAMTNANNNASSNMALFPPTSQMMPP--SARFPFKSVISP 66
           PP  L +  N     P+A +  +   N + S  M    P    M P    +  +      
Sbjct: 34  PPGMLMSHHNSYNRNPNAAAAVLMGHNTSTSQAMHQRLPFGGSMSPHQPQQHQYHHPQPQ 93

Query: 67  ASLHLDSMNASPYDGT---------HSGNFNVD--SGKKRRGRPRKYDPD-------GNI 126
             +   ++ +  +DG+         HS  F +D    KK+RGRPRKY  D       G+ 
Sbjct: 94  QQIDQKTLESLGFDGSPSSVAATQQHSMRFGIDHQQVKKKRGRPRKYAADGGGGGGGGSN 153

Query: 127 IALGLAPTTVVTSSVVH----------GDLSA--TPDLEQPVRKPRGRPRGSGKKQTNAL 186
           IALGLAPT+ + S+             GD +       + P ++ RGRP GSGKKQ +AL
Sbjct: 154 IALGLAPTSPLPSASNSYGGGNEGGGGGDSAGANANSSDPPAKRNRGRPPGSGKKQLDAL 213

Query: 187 -GSSGTSFTPYAVLAKPGEDVVAKILSYSQQGTRTAFILSANGTISNATLRHSASSG--G 246
            G+ G  FTP+ +  K GED+  KIL+++ QG R   ILSA G ++N  LR + +S   G
Sbjct: 214 GGTGGVGFTPHVIEVKTGEDIATKILAFTNQGPRAICILSATGAVTNVMLRQANNSNPTG 273

Query: 247 SVTYKGQFEIISLSGPILPLENNETGSRTGGLNVLLAGSDGQVLGGGVAGMLMAGSQVQV 306
           +V Y+G+FEIISLSG  L  E+N T ++TG L+V LAG +G+++GG V GML+AGSQVQV
Sbjct: 274 TVKYEGRFEIISLSGSFLNSESNGTVTKTGNLSVSLAGHEGRIVGGCVDGMLVAGSQVQV 333

Query: 307 IVGNFLEDDKNFNTTSMLNSGS---SSAPLQMMNFGGGGGGGDAASSSSAVAAAAAASPR 366
           IVG+F+ D +    ++     +   +SAP  M++FGG GG G               SPR
Sbjct: 334 IVGSFVPDGRKQKQSAGRAQNTPEPASAPANMLSFGGVGGPG---------------SPR 393

Query: 367 SLGAS-SGESSAEN-GESPLNNRHPGMFNNNN----NNTSQPMHN-NNQMYHQLWSGQTQ 383
           S G   S ESS EN   SPL+ R     +NN+    N+T QP+H    QMY  LW G + 
Sbjct: 394 SQGQQHSSESSEENESNSPLHRRSNNNNSNNHGIFGNSTPQPLHQIPMQMYQNLWPGNSP 439

[Close]

BLAST of CmoCh19G002560.1 vs. TAIR 10
Match: AT2G33620.1 (AT hook motif DNA-binding family protein )

HSP 1 Score: 159.8 bits (403), Expect = 4.2e-39
Identity = 131/354 (37.01%), Postives = 179/354 (50.56%), Query Frame = 0


Query: 17  MAIGGPSAYSTAMTNANNN------ASSNMALFPPTSQMMPPSARFPFKSVISPASLHLD 76
           MA+     +S A    + N           AL+    + + P  ++   S    + L+++
Sbjct: 20  MALHQQQQHSQAQPQQSQNRPLSFGGDDGTALYKQPMRSVSPPQQYQPNSAGENSVLNMN 79

Query: 77  SMNASPYDGTHSGNFNVDSGKKRRGRPRKYDPDGNIIALGL---APTTVVTSSVVHGDLS 136
                    T +G+  V   KKRRGRPRKY PD   ++LGL   AP+  V+     GD  
Sbjct: 80  LPGGESGGMTGTGSEPV---KKRRGRPRKYGPDSGEMSLGLNPGAPSFTVSQPSSGGDGG 139

Query: 137 ATPDLEQPVRKPRGRPRGSGKK--QTNALGSSGTSFTPYAVLAKPGEDVVAKILSYSQQG 196
                     K RGRP GS  K  +  ALGS+G  FTP+ +    GEDV +KI++ +  G
Sbjct: 140 ---------EKKRGRPPGSSSKRLKLQALGSTGIGFTPHVLTVLAGEDVSSKIMALTHNG 199

Query: 197 TRTAFILSANGTISNATLRHSASSGGSVTYKGQFEIISLSGPILPLENNETGSRTGGLNV 256
            R   +LSANG ISN TLR SA+SGG+VTY+G+FEI+SLSG    LENN   SRTGGL+V
Sbjct: 200 PRAVCVLSANGAISNVTLRQSATSGGTVTYEGRFEILSLSGSFHLLENNGQRSRTGGLSV 259

Query: 257 LLAGSDGQVLGGGVAGMLMAGSQVQVIVGNFLEDDKNFNTTSMLNSGSSSAPLQMMNFGG 316
            L+  DG VLGG VAG+L+A S VQ++VG+FL D +      +   G SS  L  +    
Sbjct: 260 SLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLPDGEKEPKQHVGQMGLSSPVLPRV---- 319

Query: 317 GGGGGDAASSSSAVAAAAAASPRSLGASSGESSAENGESPLNNRHPGMFNNNNN 360
                     +        +SP+S G  S  S      SP++    G +NN  N
Sbjct: 320 ----------APTQVLMTPSSPQSRGTMSESSCGGGHGSPIHQSTGGPYNNTIN 347

[Close]

BLAST of CmoCh19G002560.1 vs. TAIR 10
Match: AT2G33620.2 (AT hook motif DNA-binding family protein )

HSP 1 Score: 159.8 bits (403), Expect = 4.2e-39
Identity = 131/354 (37.01%), Postives = 179/354 (50.56%), Query Frame = 0


Query: 17  MAIGGPSAYSTAMTNANNN------ASSNMALFPPTSQMMPPSARFPFKSVISPASLHLD 76
           MA+     +S A    + N           AL+    + + P  ++   S    + L+++
Sbjct: 20  MALHQQQQHSQAQPQQSQNRPLSFGGDDGTALYKQPMRSVSPPQQYQPNSAGENSVLNMN 79

Query: 77  SMNASPYDGTHSGNFNVDSGKKRRGRPRKYDPDGNIIALGL---APTTVVTSSVVHGDLS 136
                    T +G+  V   KKRRGRPRKY PD   ++LGL   AP+  V+     GD  
Sbjct: 80  LPGGESGGMTGTGSEPV---KKRRGRPRKYGPDSGEMSLGLNPGAPSFTVSQPSSGGDGG 139

Query: 137 ATPDLEQPVRKPRGRPRGSGKK--QTNALGSSGTSFTPYAVLAKPGEDVVAKILSYSQQG 196
                     K RGRP GS  K  +  ALGS+G  FTP+ +    GEDV +KI++ +  G
Sbjct: 140 ---------EKKRGRPPGSSSKRLKLQALGSTGIGFTPHVLTVLAGEDVSSKIMALTHNG 199

Query: 197 TRTAFILSANGTISNATLRHSASSGGSVTYKGQFEIISLSGPILPLENNETGSRTGGLNV 256
            R   +LSANG ISN TLR SA+SGG+VTY+G+FEI+SLSG    LENN   SRTGGL+V
Sbjct: 200 PRAVCVLSANGAISNVTLRQSATSGGTVTYEGRFEILSLSGSFHLLENNGQRSRTGGLSV 259

Query: 257 LLAGSDGQVLGGGVAGMLMAGSQVQVIVGNFLEDDKNFNTTSMLNSGSSSAPLQMMNFGG 316
            L+  DG VLGG VAG+L+A S VQ++VG+FL D +      +   G SS  L  +    
Sbjct: 260 SLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLPDGEKEPKQHVGQMGLSSPVLPRV---- 319

Query: 317 GGGGGDAASSSSAVAAAAAASPRSLGASSGESSAENGESPLNNRHPGMFNNNNN 360
                     +        +SP+S G  S  S      SP++    G +NN  N
Sbjct: 320 ----------APTQVLMTPSSPQSRGTMSESSCGGGHGSPIHQSTGGPYNNTIN 347

[Close]

BLAST of CmoCh19G002560.1 vs. TAIR 10
Match: AT2G33620.3 (AT hook motif DNA-binding family protein )

HSP 1 Score: 159.8 bits (403), Expect = 4.2e-39
Identity = 131/354 (37.01%), Postives = 179/354 (50.56%), Query Frame = 0


Query: 17  MAIGGPSAYSTAMTNANNN------ASSNMALFPPTSQMMPPSARFPFKSVISPASLHLD 76
           MA+     +S A    + N           AL+    + + P  ++   S    + L+++
Sbjct: 20  MALHQQQQHSQAQPQQSQNRPLSFGGDDGTALYKQPMRSVSPPQQYQPNSAGENSVLNMN 79

Query: 77  SMNASPYDGTHSGNFNVDSGKKRRGRPRKYDPDGNIIALGL---APTTVVTSSVVHGDLS 136
                    T +G+  V   KKRRGRPRKY PD   ++LGL   AP+  V+     GD  
Sbjct: 80  LPGGESGGMTGTGSEPV---KKRRGRPRKYGPDSGEMSLGLNPGAPSFTVSQPSSGGDGG 139

Query: 137 ATPDLEQPVRKPRGRPRGSGKK--QTNALGSSGTSFTPYAVLAKPGEDVVAKILSYSQQG 196
                     K RGRP GS  K  +  ALGS+G  FTP+ +    GEDV +KI++ +  G
Sbjct: 140 ---------EKKRGRPPGSSSKRLKLQALGSTGIGFTPHVLTVLAGEDVSSKIMALTHNG 199

Query: 197 TRTAFILSANGTISNATLRHSASSGGSVTYKGQFEIISLSGPILPLENNETGSRTGGLNV 256
            R   +LSANG ISN TLR SA+SGG+VTY+G+FEI+SLSG    LENN   SRTGGL+V
Sbjct: 200 PRAVCVLSANGAISNVTLRQSATSGGTVTYEGRFEILSLSGSFHLLENNGQRSRTGGLSV 259

Query: 257 LLAGSDGQVLGGGVAGMLMAGSQVQVIVGNFLEDDKNFNTTSMLNSGSSSAPLQMMNFGG 316
            L+  DG VLGG VAG+L+A S VQ++VG+FL D +      +   G SS  L  +    
Sbjct: 260 SLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLPDGEKEPKQHVGQMGLSSPVLPRV---- 319

Query: 317 GGGGGDAASSSSAVAAAAAASPRSLGASSGESSAENGESPLNNRHPGMFNNNNN 360
                     +        +SP+S G  S  S      SP++    G +NN  N
Sbjct: 320 ----------APTQVLMTPSSPQSRGTMSESSCGGGHGSPIHQSTGGPYNNTIN 347

The following BLAST results are available for this feature:

BLAST of CmoCh19G002560.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIR1	7.2e-44	37.05	AT-hook motif nuclear-localized protein 8 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
Q940I0	3.6e-43	37.53	AT-hook motif nuclear-localized protein 13 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O22812	5.9e-38	37.01	AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q8VYJ2	1.7e-37	37.71	AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
Q9SB31	2.8e-35	38.46	AT-hook motif nuclear-localized protein 3 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]

BLAST of CmoCh19G002560.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HG92	6.1e-203	100.00	AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1HUU4	2.4e-191	95.81	AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111467...	[more]
A0A6J1K244	1.2e-137	73.56	AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111491...	[more]
A0A1S3CQG0	1.2e-137	74.93	AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103503537 ...	[more]
A0A0A0LED1	3.4e-137	74.41	AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_3G9023...	[more]

BLAST of CmoCh19G002560.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46640.1	5.1e-45	37.05	AT hook motif DNA-binding family protein	[more]
AT4G17950.1	2.6e-44	37.53	AT hook motif DNA-binding family protein	[more]
AT2G33620.1	4.2e-39	37.01	AT hook motif DNA-binding family protein	[more]
AT2G33620.2	4.2e-39	37.01	AT hook motif DNA-binding family protein	[more]
AT2G33620.3	4.2e-39	37.01	AT hook motif DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 163..276 e-value: 6.3E-23 score: 81.3
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 158..299 score: 31.44561
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 162..276 e-value: 2.10788E-28 score: 105.36
None	No IPR available	GENE3D	3.30.1330.80		coord: 164..290 e-value: 3.5E-23 score: 84.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..101
None	No IPR available	PANTHER	PTHR31500:SF80	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8	coord: 46..344
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 159..278
IPR039605	AT-hook motif nuclear-localized protein	PANTHER	PTHR31500	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9	coord: 46..344

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh19G002560	CmoCh19G002560	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh19G002560.1:exon:7012	CmoCh19G002560.1:exon:7012	exon
CmoCh19G002560.1:exon:7013	CmoCh19G002560.1:exon:7013	exon
CmoCh19G002560.1:exon:7014	CmoCh19G002560.1:exon:7014	exon
CmoCh19G002560.1:exon:7015	CmoCh19G002560.1:exon:7015	exon
CmoCh19G002560.1:exon:7016	CmoCh19G002560.1:exon:7016	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh19G002560.1:cds	CmoCh19G002560.1:cds	CDS
CmoCh19G002560.1:cds	CmoCh19G002560.1:cds_2	CDS
CmoCh19G002560.1:cds	CmoCh19G002560.1:cds_3	CDS
CmoCh19G002560.1:cds	CmoCh19G002560.1:cds_4	CDS
CmoCh19G002560.1:cds	CmoCh19G002560.1:cds_5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh19G002560.1:three_prime_utr	CmoCh19G002560.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh19G002560.1	CmoCh19G002560.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding