CmoCh17G002340.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G002340.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	mavicyanin-like
Location	Cmo_Chr17: 1384546 .. 1386527 (+)
Sequence length	845
RNA-Seq Expression	CmoCh17G002340.1
Synteny	CmoCh17G002340.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTTAAATTCAAAAACCCATTTCAGCCAAGTGGAAGTTGAGAGGGTAACCGCCGGAAAATGGGTTTTGCGGCGGAGAGAGCGGTTGCGGTGACGGCGGCGGTGTTCGTGGTGGTCATGACCATGGTGCTAGAGCCGGCGGTGGCGGCGGTTTATAAGGTTGGAGACGCCGCCGGCTGGACCACCATCGGCGGCGTCGACTACAAGCAGTGGGCTGCTACCAAGACTTTCCAGCCCGGTGATGTCATCGGTAAGTTTCTTATGAACATTTGTCAATTTTTTTTTAAAATTCCTTTCTTAATTATTATTGTTATTTTGGAAATTGAATTTTTTGGATCATAAAATAAAAACCCATTTCGTGATTTTCTCGTTTCATGCCTTTTTGTTGCCAAAATTTTATTTTTAAAAAAATAAGGATTATTTTTTAAATTAAGAAAAAATGGGTTTAATTATAAAAATAATTCTTACTTTTTTTTTCTTTTAAAAATATTCTCGTTTTAAAATTTTGTAAAAGTGCAAGGATAATGTTGTAATTATGAAAAAATATTGATTTTTTTTTTAAATGGAATTATTTTTTTAGTAATTTGTATTATTATTATTATTATTATTTTTAAAGGTTTTTGTGATGAGAGACATTTCCGACAAGAATGGTCGTAGGCTTTGAGATTGGAAGTAGGGTATAAAAGAAACTTCCAAAAATAAACAAAAAATAATAAAAAAAGAAATTAGGTGGGCTGGAAGCATGTGATAGTGGGCCACACATTATGGGCCCTACAAGGCCCATTATGTACAAGCTTTTTCACCCACTCACTCACGCCATCATTATGATTTACACCACTTCACAAATTTAAAATAATATAATTCCCATAAACCCTTCTTAATTTCCTTTTTTTTTCTTTAATTCCTTTAAAATTCAAAATTAACTCAAAAATATATTTTGTTTTATTTTATTTTTGCCTATGACTTTGTTAAATTACTAATTTGGTGGCTTCTAAACTTCAAAGGTAAAAGAATATTATTTAAAAAATAATTAACGAATTATTAGACATAAAATTAATCTTTGTATATAATAAGATATTGAATTTTTAATTTTGTATAAAATAATGTCGAATTTTGATAGATCATTATCAAACAATTTTTAAAGTTTGAAATCGAGTAGAAAAATTTTAAGATTTAAAAGCTTATTTTACATGAATTTGAAAATTTTAAAGTAAATTTGATTTTTGAATTCGAGTTCATTATAACGGTCCGATTGAATAATTTACGGGGATGAGTTTGATTTTTCAGTATTTGAGTACAACGCCAAGTTCGGGTTCATTATAGCAGTCCGATCGAATAATTTACGGGTTTTTAAGAAATGATCGAAATGATGAGTTTGTTTTTTCAGTATTTGAGTACAACGCCAAGTTCCACAACGTAATGAGAGTGACGCATGGGATGTACAAATCATGCAATGTCTCAGACCCCATAGAGACACACTCTTCCGGCAACGACACCATCACCATTCAAACCAGAGGCCATCACTTTTTCCTCTGCGGCGTTCCCGGCCACTGCCAGGCCGGCCAGAAGGTCGACATTAACGTCCAACGCCTTGCTTCCACCACCGTCGCCCCAGAGCCCTCTGCCTTGGCCTCCCCTGCCGTCCCCCTCGCACATACACCCACCGCACAAGCACCAAAAGCCACTGCCCCGCGCCTCAGCACTGGCTTTTGGCTATTGCTTTCGGCCTTGTCCGTTCTAGCGTTCGCTTAAACGGGCACAAGCCAAGCCCTTCCCTTTCATTAAGTTGCAGTCTTTTTTGTACAACAAATTTCAGCCATTTTGTAGTGATAGTTCGTCATCGAGGTCTCTTTTTACGTCGTCTATACATACGTTTTCGTAAGTTTGAAGCTTTCATAAACAAAATAAACTAAGCCAACTCTTATCATTACAATATATGATATAATACAATGCTCTGTTCTGCTCTGTTCTTTAGATATCTAC

mRNA sequence

ATCTTAAATTCAAAAACCCATTTCAGCCAAGTGGAAGTTGAGAGGGTAACCGCCGGAAAATGGGTTTTGCGGCGGAGAGAGCGGTTGCGGTGACGGCGGCGGTGTTCGTGGTGGTCATGACCATGGTGCTAGAGCCGGCGGTGGCGGCGGTTTATAAGGTTGGAGACGCCGCCGGCTGGACCACCATCGGCGGCGTCGACTACAAGCAGTGGGCTGCTACCAAGACTTTCCAGCCCGGTGATGTCATCGTATTTGAGTACAACGCCAAGTTCCACAACGTAATGAGAGTGACGCATGGGATGTACAAATCATGCAATGTCTCAGACCCCATAGAGACACACTCTTCCGGCAACGACACCATCACCATTCAAACCAGAGGCCATCACTTTTTCCTCTGCGGCGTTCCCGGCCACTGCCAGGCCGGCCAGAAGGTCGACATTAACGTCCAACGCCTTGCTTCCACCACCGTCGCCCCAGAGCCCTCTGCCTTGGCCTCCCCTGCCGTCCCCCTCGCACATACACCCACCGCACAAGCACCAAAAGCCACTGCCCCGCGCCTCAGCACTGGCTTTTGGCTATTGCTTTCGGCCTTGTCCGTTCTAGCGTTCGCTTAAACGGGCACAAGCCAAGCCCTTCCCTTTCATTAAGTTGCAGTCTTTTTTGTACAACAAATTTCAGCCATTTTGTAGTGATAGTTCGTCATCGAGGTCTCTTTTTACGTCGTCTATACATACGTTTTCGTAAGTTTGAAGCTTTCATAAACAAAATAAACTAAGCCAACTCTTATCATTACAATATATGATATAATACAATGCTCTGTTCTGCTCTGTTCTTTAGATATCTAC

Coding sequence (CDS)

ATGGGTTTTGCGGCGGAGAGAGCGGTTGCGGTGACGGCGGCGGTGTTCGTGGTGGTCATGACCATGGTGCTAGAGCCGGCGGTGGCGGCGGTTTATAAGGTTGGAGACGCCGCCGGCTGGACCACCATCGGCGGCGTCGACTACAAGCAGTGGGCTGCTACCAAGACTTTCCAGCCCGGTGATGTCATCGTATTTGAGTACAACGCCAAGTTCCACAACGTAATGAGAGTGACGCATGGGATGTACAAATCATGCAATGTCTCAGACCCCATAGAGACACACTCTTCCGGCAACGACACCATCACCATTCAAACCAGAGGCCATCACTTTTTCCTCTGCGGCGTTCCCGGCCACTGCCAGGCCGGCCAGAAGGTCGACATTAACGTCCAACGCCTTGCTTCCACCACCGTCGCCCCAGAGCCCTCTGCCTTGGCCTCCCCTGCCGTCCCCCTCGCACATACACCCACCGCACAAGCACCAAAAGCCACTGCCCCGCGCCTCAGCACTGGCTTTTGGCTATTGCTTTCGGCCTTGTCCGTTCTAGCGTTCGCTTAA

Protein sequence

MGFAAERAVAVTAAVFVVVMTMVLEPAVAAVYKVGDAAGWTTIGGVDYKQWAATKTFQPGDVIVFEYNAKFHNVMRVTHGMYKSCNVSDPIETHSSGNDTITIQTRGHHFFLCGVPGHCQAGQKVDINVQRLASTTVAPEPSALASPAVPLAHTPTAQAPKATAPRLSTGFWLLLSALSVLAFA

Homology

[Close]

BLAST of CmoCh17G002340.1 vs. ExPASy Swiss-Prot
Match: P80728 (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.9e-27
Identity = 52/101 (51.49%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 29  AAVYKVGDAAGWTTIGGVDYKQWAATKTFQPGDVIVFEYNAKFHNVMRVTHGMYKSCNVS 88
           A V+KVGD+ GWTT+   DY +WA++  F  GD ++F YN KFHNV++V    +KSCN S
Sbjct: 1   ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 60

Query: 89  DPIETHSSGNDTITIQTRGHHFFLCGVPGHCQAGQKVDINV 130
            P  +++SG D+I ++  G  +FLCG+PGHCQ GQKV+I V
Sbjct: 61  SPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101

[Close]

BLAST of CmoCh17G002340.1 vs. ExPASy Swiss-Prot
Match: P00302 (Stellacyanin OS=Toxicodendron vernicifluum OX=4013 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.7e-25
Identity = 52/102 (50.98%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 31  VYKVGDAAGWTT--IGGVDYK-QWAATKTFQPGDVIVFEYNAKFHNVMRVTHGMYKSCNV 90
           VY VGD+AGW     G VDY  +WA+ KTF  GDV+VF+Y+ +FHNV +VT   Y+SCN 
Sbjct: 2   VYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCND 61

Query: 91  SDPIETHSSGNDTITIQTRGHHFFLCGVPGHCQAGQKVDINV 130
           + PI ++++G++ I ++T G  +++CGVP HC  GQKV INV
Sbjct: 62  TTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINV 103

[Close]

BLAST of CmoCh17G002340.1 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.1e-21
Identity = 66/176 (37.50%), Postives = 91/176 (51.70%), Query Frame = 0


Query: 10  AVTAAVFVVVMTMVLEPAVAAVYKVGDAAGWTTIGGVDYKQWAATKTFQPGDVIVFEYNA 69
           A+     + ++ M L P++A VY VGD +GW  IGG DY  WA+ KTF  GD +VF Y A
Sbjct: 6   ALVLCFLLAIINMAL-PSLATVYTVGDTSGW-VIGG-DYSTWASDKTFAVGDSLVFNYGA 65

Query: 70  KFHNVMRVTHGMYKSCNVSDPIETHSSGNDTITIQTRGHHFFLCGVPGHCQAGQKVDINV 129
             H V  V    YKSC   + I T S+G  TI ++  G H+F+CGVPGH   G K+ I V
Sbjct: 66  GAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKV 125

Query: 130 QRLASTTVAPE--PSALASPAVPLAHTPTAQAPKATAPRLSTGFWLLLSALSVLAF 184
           +  + ++ AP   PS+    +     TP A     T  + +      LS +  L F
Sbjct: 126 KASSGSSAAPSATPSSSGKGSPSSDDTPAATTTTTTPTKQNESSATSLSPIVALFF 178

[Close]

BLAST of CmoCh17G002340.1 vs. ExPASy Swiss-Prot
Match: O82081 (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.0e-20
Identity = 53/151 (35.10%), Postives = 83/151 (54.97%), Query Frame = 0


Query: 15  VFVVVMTMVLEPAVAAVYKVGDAAGWTTIGGVDYKQWAATKTFQPGDVIVFEYNAKFHNV 74
           +  V+ T ++   VA  + +G  +GWT   G   + WAA +TF  GD +VF Y A FH+V
Sbjct: 9   IISVLATTLIGLTVATDHTIGGPSGWTV--GASLRTWAAGQTFAVGDNLVFSYPAAFHDV 68

Query: 75  MRVTHGMYKSCNVSDPIETHSSGNDTITIQTRGHHFFLCGVPGHCQAGQKVDINVQRLAS 134
           + VT   + SC    P+ T ++GN  + + T G  +F+CG+PGHC  G K+++NV     
Sbjct: 69  VEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNV----- 128

Query: 135 TTVAPEPSALASPAVPLAHT-PTAQAPKATA 165
                 P+A  +P  PL +T P+  AP  ++
Sbjct: 129 -----VPTATVAPTAPLPNTVPSLNAPSPSS 147

[Close]

BLAST of CmoCh17G002340.1 vs. ExPASy Swiss-Prot
Match: P60496 (Chemocyanin OS=Lilium longiflorum OX=4690 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.8e-20
Identity = 55/124 (44.35%), Postives = 73/124 (58.87%), Query Frame = 0


Query: 4   AAERAVAVTAAVFVVVMTMVLEPAVAAVYKVGDAAGWTTIGGVDYKQWAATKTFQPGDVI 63
           +AERA+ +   V +V +    E A + VY VGD  GWT         W A KTF+ GDV+
Sbjct: 7   SAERALVL--GVVLVFLVFNCEVAESVVYTVGDGGGWT----FGTSGWPAGKTFRAGDVL 66

Query: 64  VFEYNAKFHNVMRVTHGMYKSCNVSDPIETHSSGNDTITIQTRGHHFFLCGVPGHCQAGQ 123
           VF+YN   HNV+ V  G YKSC  S       SG+D IT+ +RG ++F+C VPGHCQ G 
Sbjct: 67  VFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITL-SRGTNYFICSVPGHCQGGL 123

Query: 124 KVDI 128
           K+ +
Sbjct: 127 KIAV 123

[Close]

BLAST of CmoCh17G002340.1 vs. ExPASy TrEMBL
Match: A0A6J1H5E2 (mavicyanin-like OS=Cucurbita moschata OX=3662 GN=LOC111460211 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.3e-96
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MGFAAERAVAVTAAVFVVVMTMVLEPAVAAVYKVGDAAGWTTIGGVDYKQWAATKTFQPG 60
           MGFAAERAVAVTAAVFVVVMTMVLEPAVAAVYKVGDAAGWTTIGGVDYKQWAATKTFQPG
Sbjct: 1   MGFAAERAVAVTAAVFVVVMTMVLEPAVAAVYKVGDAAGWTTIGGVDYKQWAATKTFQPG 60

Query: 61  DVIVFEYNAKFHNVMRVTHGMYKSCNVSDPIETHSSGNDTITIQTRGHHFFLCGVPGHCQ 120
           DVIVFEYNAKFHNVMRVTHGMYKSCNVSDPIETHSSGNDTITIQTRGHHFFLCGVPGHCQ
Sbjct: 61  DVIVFEYNAKFHNVMRVTHGMYKSCNVSDPIETHSSGNDTITIQTRGHHFFLCGVPGHCQ 120

Query: 121 AGQKVDINVQRLASTTVAPEPSALASPAVPLAHTPTAQAPKATAPRLSTGFWLLLSALSV 180
           AGQKVDINVQRLASTTVAPEPSALASPAVPLAHTPTAQAPKATAPRLSTGFWLLLSALSV
Sbjct: 121 AGQKVDINVQRLASTTVAPEPSALASPAVPLAHTPTAQAPKATAPRLSTGFWLLLSALSV 180

Query: 181 LAFA 185
           LAFA
Sbjct: 181 LAFA 184

[Close]

BLAST of CmoCh17G002340.1 vs. ExPASy TrEMBL
Match: A0A6J1KZB5 (mavicyanin-like OS=Cucurbita maxima OX=3661 GN=LOC111498960 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.3e-91
Identity = 177/184 (96.20%), Postives = 178/184 (96.74%), Query Frame = 0


Query: 1   MGFAAERAVAVTAAVFVVVMTMVLEPAVAAVYKVGDAAGWTTIGGVDYKQWAATKTFQPG 60
           MGFAAER  AVTAAVFVVVM+MVLEPAVAAVYKVGDAAGWTTIGGVDYKQWAATKTFQPG
Sbjct: 1   MGFAAERTGAVTAAVFVVVMSMVLEPAVAAVYKVGDAAGWTTIGGVDYKQWAATKTFQPG 60

Query: 61  DVIVFEYNAKFHNVMRVTHGMYKSCNVSDPIETHSSGNDTITIQTRGHHFFLCGVPGHCQ 120
           DVIVFEYNAKFHNVMRVTHGMYKSCNVSDPIETHSSGNDTITIQTRGHHFFLCGVPGHCQ
Sbjct: 61  DVIVFEYNAKFHNVMRVTHGMYKSCNVSDPIETHSSGNDTITIQTRGHHFFLCGVPGHCQ 120

Query: 121 AGQKVDINVQRLASTTVAPEPSALASPAVPLAHTPTAQAPKATAPRLSTGFWLLLSALSV 180
           AGQKVDINVQRLASTTVAPEPSALASPAVPLAHTP AQAPKATA RL TGFWLLLSALSV
Sbjct: 121 AGQKVDINVQRLASTTVAPEPSALASPAVPLAHTPAAQAPKATALRLGTGFWLLLSALSV 180

Query: 181 LAFA 185
           LA A
Sbjct: 181 LAIA 184

[Close]

BLAST of CmoCh17G002340.1 vs. ExPASy TrEMBL
Match: A0A0A0KED4 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G425040 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.7e-71
Identity = 145/181 (80.11%), Postives = 155/181 (85.64%), Query Frame = 0


Query: 1   MGFAAERAVAVTAAVFVVVMTMVLEPAVAAVYKVGDAAGWTTIGGVDYKQWAATKTFQPG 60
           MGFAA   V  T  V V +MTM+ E A+ AVYKVGDAAGWT IGGVDYKQWAATKTFQ G
Sbjct: 1   MGFAA--TVTATVLVVVTMMTMMPEMALGAVYKVGDAAGWTIIGGVDYKQWAATKTFQLG 60

Query: 61  DVIVFEYNAKFHNVMRVTHGMYKSCNVSDPIETHSSGNDTITIQTRGHHFFLCGVPGHCQ 120
           DVIVFEYN+KFHNVMRV+H MYKSCNVS PIETH+SGND+ITIQTRGHHFFLCGVPGHCQ
Sbjct: 61  DVIVFEYNSKFHNVMRVSHEMYKSCNVSRPIETHTSGNDSITIQTRGHHFFLCGVPGHCQ 120

Query: 121 AGQKVDINVQRLASTTVAPEPSALASPAVPLAHTPTAQAPKATAPRLSTGFWLLLSALSV 180
           AGQKVDINVQRL ST  APEPSALASP+VP+AHTPTA APKA A R+S GF LL  ALSV
Sbjct: 121 AGQKVDINVQRLTSTAAAPEPSALASPSVPIAHTPTAPAPKAAASRVSAGFELLFLALSV 179

Query: 181 L 182
           L
Sbjct: 181 L 179

[Close]

BLAST of CmoCh17G002340.1 vs. ExPASy TrEMBL
Match: A0A5A7V0J7 (Mavicyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00760 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.2e-69
Identity = 145/183 (79.23%), Postives = 155/183 (84.70%), Query Frame = 0


Query: 1   MGFAAERAVAVTAAVFVVVMTMVLEPAVAAVYKVGDAAGWTTIGGVDYKQWAATKTFQPG 60
           MGFAA     VTAAV ++ MTM+ E AV AVYKVGDAAGWT IGGVDYKQWAATKTFQ G
Sbjct: 1   MGFAA----VVTAAV-LMTMTMMPEMAVGAVYKVGDAAGWTIIGGVDYKQWAATKTFQLG 60

Query: 61  DVIVFEYNAKFHNVMRVTHGMYKSCNVSDPIETHSSGNDTITIQTRGHHFFLCGVPGHCQ 120
           DVIVFEYN KFHNVMRV+H MYKSCNVS PIETH+SGND+ITIQTRGHHFFLCGVPGHCQ
Sbjct: 61  DVIVFEYNPKFHNVMRVSHEMYKSCNVSRPIETHTSGNDSITIQTRGHHFFLCGVPGHCQ 120

Query: 121 AGQKVDINVQRLASTTVAPEPSALASPAVPLAHTPTAQAPKATAPRLSTGF-WLLLSALS 180
           AGQKVDINVQRL ST  APEPSALASP+VP+AHTPTA APKA A R+  GF  LLL   S
Sbjct: 121 AGQKVDINVQRLTSTAAAPEPSALASPSVPIAHTPTAPAPKAAASRVGAGFALLLLLGFS 178

Query: 181 VLA 183
           V+A
Sbjct: 181 VIA 178

[Close]

BLAST of CmoCh17G002340.1 vs. ExPASy TrEMBL
Match: A0A1S3BN83 (mavicyanin OS=Cucumis melo OX=3656 GN=LOC103491407 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.1e-61
Identity = 128/162 (79.01%), Postives = 140/162 (86.42%), Query Frame = 0


Query: 1   MGFAAERAVAVTAAVFVVVMTMVLEPAVAAVYKVGDAAGWTTIGGVDYKQWAATKTFQPG 60
           MGFAA     VTAAV ++ MTM+ E AV AVYKVGDAAGWT IGGVDYKQWAATKTFQ G
Sbjct: 1   MGFAA----VVTAAV-LMTMTMMPEMAVGAVYKVGDAAGWTIIGGVDYKQWAATKTFQLG 60

Query: 61  DVIVFEYNAKFHNVMRVTHGMYKSCNVSDPIETHSSGNDTITIQTRGHHFFLCGVPGHCQ 120
           DVIVFEYN KFHNVMRV+H MYKSCNVS PIETH+SGND+ITIQTRGHHFFLCGVPGHCQ
Sbjct: 61  DVIVFEYNPKFHNVMRVSHEMYKSCNVSRPIETHTSGNDSITIQTRGHHFFLCGVPGHCQ 120

Query: 121 AGQKVDINVQRLASTTVAPEPSALASPAVPLAHTPTAQAPKA 163
           AGQKVDINVQRL ST  APEPSALASP+VP+A  P + +P++
Sbjct: 121 AGQKVDINVQRLTSTAAAPEPSALASPSVPIAPHPHSTSPES 157

[Close]

BLAST of CmoCh17G002340.1 vs. TAIR 10
Match: AT5G26330.1 (Cupredoxin superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 6.7e-43
Identity = 90/170 (52.94%), Postives = 115/170 (67.65%), Query Frame = 0


Query: 8   AVAVTAAVFVVVMTMVLEPAVAAVYKVGDAAGWTTIGGVDYKQWAATKTFQPGDVIVFEY 67
           A+ V A   +VVM  + E   AAVYKVGD+AGWTTI  VDYK WA+TKTF  GD ++FEY
Sbjct: 3   AIIVAALACIVVMLRLSE---AAVYKVGDSAGWTTIANVDYKLWASTKTFHIGDTVLFEY 62

Query: 68  NAKFHNVMRVTHGMYKSCNVSDPIETHSSGNDTITIQTRGHHFFLCGVPGHCQAGQKVDI 127
           N +FHNVMRVTH MY+SCN S PI T ++GND+IT+   GHHFF CGVPGHC AGQK+D+
Sbjct: 63  NPQFHNVMRVTHPMYRSCNTSKPISTFTTGNDSITLTNHGHHFFFCGVPGHCLAGQKLDL 122

Query: 128 NVQRLASTTVAPEPSALASPAVPLAHTPTAQAPKATAPRLSTGFWLLLSA 178
           +V   AS+T   +P   +S + P    P A  P   +P L+     +++A
Sbjct: 123 HVLLPASSTPLSDPPTSSSSSPPSTTIPAAGVP-GPSPSLAASLPSMVTA 168

[Close]

BLAST of CmoCh17G002340.1 vs. TAIR 10
Match: AT2G31050.1 (Cupredoxin superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 4.9e-25
Identity = 60/138 (43.48%), Postives = 83/138 (60.14%), Query Frame = 0


Query: 31  VYKVGDAAGWTTIGGVDYKQWAATKTFQPGDVIVFEYNAKFHNVMRVTHGMYKSCNVSDP 90
           V+KVGD+ GW TI  V+Y+ WA+T TFQ GD +VF+YN  FH+V  VTH  Y+ C  S P
Sbjct: 28  VHKVGDSDGW-TIMSVNYETWASTITFQVGDSLVFKYNKDFHDVTEVTHNDYEMCEPSKP 87

Query: 91  IETHSSGNDTITIQTRGHHFFLCGVPGHCQAGQKVDINVQRLASTTVAP-------EPSA 150
           +  + +G+D + +   G   F+CG PGHC  GQK+ I+V   +   VA         PS+
Sbjct: 88  LARYETGSDIVILTKPGLQHFICGFPGHCDMGQKLQIHVLPASLGPVAAPVPGPVRPPSS 147

Query: 151 LASPA-VPLAHTPTAQAP 161
            +SP+  PLA +P   AP
Sbjct: 148 FSSPSQSPLAESPVNHAP 164

[Close]

BLAST of CmoCh17G002340.1 vs. TAIR 10
Match: AT2G26720.1 (Cupredoxin superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 6.3e-25
Identity = 57/143 (39.86%), Postives = 84/143 (58.74%), Query Frame = 0


Query: 31  VYKVGDAAGWTTIGGVDYKQWAATKTFQPGDVIVFEYNAKFHNVMRVTHGMYKSCNVSDP 90
           V+KVG+  GWT IGG DY+ WA+++ FQ GD +VF YN  +H+V  VTH  ++ C  S P
Sbjct: 28  VHKVGNTKGWTMIGG-DYEAWASSRVFQVGDTLVFAYNKDYHDVTEVTHNDFEMCESSKP 87

Query: 91  IETHSSGNDTITIQTRGHHFFLCGVPGHCQAGQKVDINVQRLASTTVA---PEPSALASP 150
           +  + +G+D+I++   G   F+CGVPGHC+ GQK+ I+V   +   VA   P P    S 
Sbjct: 88  LRRYKTGSDSISLTKPGLQHFICGVPGHCKKGQKLQIHVLPASLGHVAVPVPGPVRSQSS 147

Query: 151 AVPLAHTPTAQAPKATAPRLSTG 171
           +   + +P    P   AP+   G
Sbjct: 148 SSSPSPSPLVDPPVNNAPQYQMG 169

[Close]

BLAST of CmoCh17G002340.1 vs. TAIR 10
Match: AT2G32300.1 (uclacyanin 1 )

HSP 1 Score: 99.0 bits (245), Expect = 4.3e-21
Identity = 53/151 (35.10%), Postives = 83/151 (54.97%), Query Frame = 0


Query: 15  VFVVVMTMVLEPAVAAVYKVGDAAGWTTIGGVDYKQWAATKTFQPGDVIVFEYNAKFHNV 74
           +  V+ T ++   VA  + +G  +GWT   G   + WAA +TF  GD +VF Y A FH+V
Sbjct: 9   IISVLATTLIGLTVATDHTIGGPSGWTV--GASLRTWAAGQTFAVGDNLVFSYPAAFHDV 68

Query: 75  MRVTHGMYKSCNVSDPIETHSSGNDTITIQTRGHHFFLCGVPGHCQAGQKVDINVQRLAS 134
           + VT   + SC    P+ T ++GN  + + T G  +F+CG+PGHC  G K+++NV     
Sbjct: 69  VEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNV----- 128

Query: 135 TTVAPEPSALASPAVPLAHT-PTAQAPKATA 165
                 P+A  +P  PL +T P+  AP  ++
Sbjct: 129 -----VPTATVAPTAPLPNTVPSLNAPSPSS 147

[Close]

BLAST of CmoCh17G002340.1 vs. TAIR 10
Match: AT3G60270.1 (Cupredoxin superfamily protein )

HSP 1 Score: 89.0 bits (219), Expect = 4.4e-18
Identity = 57/152 (37.50%), Postives = 81/152 (53.29%), Query Frame = 0


Query: 10  AVTAAVFVVVMTMVLEPAVAAV-YKVGDAAGWTTIGGVDYKQWAATKTFQPGDVIVFEYN 69
           +  A   ++++ +V  PAV AV ++VGD  GWT   GV+Y  W + KTF+ GD + F+Y 
Sbjct: 3   STAATALLLLLLLVAVPAVFAVTFQVGDNDGWTI--GVEYTSWVSEKTFRVGDTLEFKYG 62

Query: 70  AKFHNVMRVTHGMYKSCNVSDPIETHSSGNDTITIQTRGHHFFLCGVPGHCQAGQKVDIN 129
              H+V  V    Y  C  S P ++ S G+  I +   G   FLC  PGHC  G K  + 
Sbjct: 63  PS-HSVAVVNKADYDGCETSRPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMK--LA 122

Query: 130 VQRLASTTVAPEPSALASPAVPLAHTPTAQAP 161
           VQ LA+ ++ P PS  A    P A +P+  AP
Sbjct: 123 VQVLAAVSLEPPPSPSAPSPSPSAPSPSPSAP 149

The following BLAST results are available for this feature:

BLAST of CmoCh17G002340.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P80728	3.9e-27	51.49	Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1	[more]
P00302	4.7e-25	50.98	Stellacyanin OS=Toxicodendron vernicifluum OX=4013 PE=1 SV=1	[more]
Q41001	4.1e-21	37.50	Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
O82081	6.0e-20	35.10	Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1	[more]
P60496	7.8e-20	44.35	Chemocyanin OS=Lilium longiflorum OX=4690 PE=1 SV=1	[more]

BLAST of CmoCh17G002340.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H5E2	5.3e-96	100.00	mavicyanin-like OS=Cucurbita moschata OX=3662 GN=LOC111460211 PE=4 SV=1	[more]
A0A6J1KZB5	2.3e-91	96.20	mavicyanin-like OS=Cucurbita maxima OX=3661 GN=LOC111498960 PE=4 SV=1	[more]
A0A0A0KED4	2.7e-71	80.11	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G425040...	[more]
A0A5A7V0J7	7.2e-69	79.23	Mavicyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00760 PE=...	[more]
A0A1S3BN83	1.1e-61	79.01	mavicyanin OS=Cucumis melo OX=3656 GN=LOC103491407 PE=4 SV=1	[more]

BLAST of CmoCh17G002340.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26330.1	6.7e-43	52.94	Cupredoxin superfamily protein	[more]
AT2G31050.1	4.9e-25	43.48	Cupredoxin superfamily protein	[more]
AT2G26720.1	6.3e-25	39.86	Cupredoxin superfamily protein	[more]
AT2G32300.1	4.3e-21	35.10	uclacyanin 1	[more]
AT3G60270.1	4.4e-18	37.50	Cupredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 181..184
None	No IPR available	PANTHER	PTHR33021:SF339	BNAA09G04270D PROTEIN	coord: 9..143
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 40..123 e-value: 1.6E-28 score: 98.5
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 30..131 score: 38.181351
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 28..135 e-value: 1.0E-38 score: 133.8
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 29..130
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 9..143

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh17G002340	CmoCh17G002340	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh17G002340.1:exon:6235	CmoCh17G002340.1:exon:6235	exon
CmoCh17G002340.1:exon:6236	CmoCh17G002340.1:exon:6236	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh17G002340.1:five_prime_utr	CmoCh17G002340.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh17G002340.1:cds	CmoCh17G002340.1:cds	CDS
CmoCh17G002340.1:cds	CmoCh17G002340.1:cds_2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh17G002340.1:three_prime_utr	CmoCh17G002340.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh17G002340.1	CmoCh17G002340.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity