CmoCh16G008680.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G008680.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	calcium-binding protein PBP1-like
Location	Cmo_Chr16: 4632439 .. 4632795 (-)
Sequence length	357
RNA-Seq Expression	CmoCh16G008680.1
Synteny	CmoCh16G008680.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTTGTCGCAGACCAATCCGGATTCGAGGACTGGCTACCGAAGATGGCGGAGAGGCTGGGCGGCGAGGGGCTGATCGGGGAGCTTTGCAATGGATTCAATCTTCTGAAGGACAGAGAGAAGGGGGTGATTGATTTCGAGAGTCTGAAGAGAAACGCGGCGGCGCTAGGGCTGGCGGATCTGAGCGATGAGGATCTGAGAGAAATGTTGAGGGAGGGGGATTTCGACGGTGATGGCGCTCTCAATCAGATGGAGTTTTGTGTTCTTATGTTCAGATTGAGCCCTGAATTGATGGACGAGTCCTGGTTCTTGCTCGAGGATGCTCTAAACCAAGAGTTTAAGGGCTTCTGTTGA

mRNA sequence

ATGGCGTTTGTCGCAGACCAATCCGGATTCGAGGACTGGCTACCGAAGATGGCGGAGAGGCTGGGCGGCGAGGGGCTGATCGGGGAGCTTTGCAATGGATTCAATCTTCTGAAGGACAGAGAGAAGGGGGTGATTGATTTCGAGAGTCTGAAGAGAAACGCGGCGGCGCTAGGGCTGGCGGATCTGAGCGATGAGGATCTGAGAGAAATGTTGAGGGAGGGGGATTTCGACGGTGATGGCGCTCTCAATCAGATGGAGTTTTGTGTTCTTATGTTCAGATTGAGCCCTGAATTGATGGACGAGTCCTGGTTCTTGCTCGAGGATGCTCTAAACCAAGAGTTTAAGGGCTTCTGTTGA

Coding sequence (CDS)

ATGGCGTTTGTCGCAGACCAATCCGGATTCGAGGACTGGCTACCGAAGATGGCGGAGAGGCTGGGCGGCGAGGGGCTGATCGGGGAGCTTTGCAATGGATTCAATCTTCTGAAGGACAGAGAGAAGGGGGTGATTGATTTCGAGAGTCTGAAGAGAAACGCGGCGGCGCTAGGGCTGGCGGATCTGAGCGATGAGGATCTGAGAGAAATGTTGAGGGAGGGGGATTTCGACGGTGATGGCGCTCTCAATCAGATGGAGTTTTGTGTTCTTATGTTCAGATTGAGCCCTGAATTGATGGACGAGTCCTGGTTCTTGCTCGAGGATGCTCTAAACCAAGAGTTTAAGGGCTTCTGTTGA

Protein sequence

MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGFC

Homology

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BLAST of CmoCh16G008680.1 vs. ExPASy Swiss-Prot
Match: O81831 (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-37
Identity = 78/109 (71.56%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 7   QSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAA-LGLADLSDE 66
           Q  F D+LP MA  LGGEGLIGELCNGF LL DREKGVI FESL+RNAAA LGL DL+DE
Sbjct: 16  QPNFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDE 75

Query: 67  DLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEF 115
           D+R M++EGDFD DGALNQMEFCVLMFRLSP+LM+ S  L+ + + +EF
Sbjct: 76  DVRCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

[Close]

BLAST of CmoCh16G008680.1 vs. ExPASy Swiss-Prot
Match: Q9LSQ6 (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.3e-33
Identity = 68/106 (64.15%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 10  FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAA-ALGLADLSDEDLR 69
           F+D+ P MA +LGGEGLI E+C GF LL D++KGVI FESL+RNA+  LGL DL+D+D+R
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 70  EMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEF 115
            M+ EGDFD DGALNQMEFCVLMFRLSPELM+ S  ++ + + +EF
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]

BLAST of CmoCh16G008680.1 vs. ExPASy Swiss-Prot
Match: Q9ZPX9 (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 4.2e-27
Identity = 59/107 (55.14%), Postives = 78/107 (72.90%), Query Frame = 0


Query: 7   QSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDED 66
           ++ +ED LP MAE++  E  + ELC GF+LL D E+ +I  ESL+RN+  LG+  +S ED
Sbjct: 19  ETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKED 78

Query: 67  LREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQE 114
            + M+REGD DGDGALNQ EFCVLM RLSPE+M+++   LE AL QE
Sbjct: 79  AQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125

[Close]

BLAST of CmoCh16G008680.1 vs. ExPASy Swiss-Prot
Match: Q2TBN3 (Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-10
Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 10  FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLRE 69
           F D+L  M +++  +    E+   F L  D E G I F++LKR A  LG  +LSDE+L+E
Sbjct: 86  FSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLSDEELQE 145

Query: 70  MLREGDFDGDGALNQMEFCVLMFRLS 96
           M+ E D DGDG +N+ EF  +M + S
Sbjct: 146 MIDEADRDGDGEVNEQEFLRIMKKTS 170

[Close]

BLAST of CmoCh16G008680.1 vs. ExPASy Swiss-Prot
Match: Q9R1K9 (Centrin-2 OS=Mus musculus OX=10090 GN=Cetn2 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.6e-10
Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 10  FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDEDLRE 69
           F D+L  M +++  +    E+   F L  D E G I F++LKR A  LG  +L+DE+L+E
Sbjct: 86  FSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQE 145

Query: 70  MLREGDFDGDGALNQMEFCVLMFRLS 96
           M+ E D DGDG +N+ EF  +M + S
Sbjct: 146 MIDEADRDGDGEVNEQEFLRIMKKTS 170

[Close]

BLAST of CmoCh16G008680.1 vs. ExPASy TrEMBL
Match: A0A6J1EN05 (calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111435976 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 9.4e-62
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLA 60
           MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLA
Sbjct: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLA 60

Query: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGFC 119
           DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGFC
Sbjct: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGFC 118

[Close]

BLAST of CmoCh16G008680.1 vs. ExPASy TrEMBL
Match: A0A6J1JAW3 (calcium-binding protein PBP1 OS=Cucurbita maxima OX=3661 GN=LOC111483314 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.0e-59
Identity = 115/117 (98.29%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLA 60
           MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDF SLKRNAAALGLA
Sbjct: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFSSLKRNAAALGLA 60

Query: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGF 118
           DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDAL+QEFKGF
Sbjct: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALSQEFKGF 117

[Close]

BLAST of CmoCh16G008680.1 vs. ExPASy TrEMBL
Match: A0A1S3BSY1 (calcium-binding protein PBP1 OS=Cucumis melo OX=3656 GN=LOC103493375 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.6e-56
Identity = 109/118 (92.37%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLA 60
           MAF A++SGFEDWLP MAERLGGEGLIGELCNGFNLL DREKGVIDFESLKRNAAALGLA
Sbjct: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60

Query: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGFC 119
           DLSDEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLE+AL+QEFK FC
Sbjct: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDFC 118

[Close]

BLAST of CmoCh16G008680.1 vs. ExPASy TrEMBL
Match: A0A0A0L347 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099590 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 8.5e-55
Identity = 106/118 (89.83%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLA 60
           MAF A++SGFEDWLP MAERLGGEGLIGELCNGFNLL +REKGVIDFESLKRNAAALGL 
Sbjct: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMNREKGVIDFESLKRNAAALGLG 60

Query: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGFC 119
           DLSDEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELM+ESWFLLE+AL+QEFK FC
Sbjct: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMEESWFLLEEALHQEFKDFC 118

[Close]

BLAST of CmoCh16G008680.1 vs. ExPASy TrEMBL
Match: A0A6J1CM41 (calcium-binding protein PBP1 OS=Momordica charantia OX=3673 GN=LOC111012869 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 6.5e-47
Identity = 94/112 (83.93%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 7   QSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDED 66
           +SGF DWLP MA RLGGEGLIGELC+GF+LL DREKGVIDFESLKRNAAALGL DL+DED
Sbjct: 11  ESGFHDWLPTMAARLGGEGLIGELCSGFSLLMDREKGVIDFESLKRNAAALGLGDLTDED 70

Query: 67  LREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGFC 119
           LR MLREGDFDGDGALNQMEFCVLMFRLSPELMDES F L+ AL  EF+ FC
Sbjct: 71  LRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDESLFCLDQALTHEFRDFC 122

[Close]

BLAST of CmoCh16G008680.1 vs. NCBI nr
Match: XP_022929391.1 (calcium-binding protein PBP1-like [Cucurbita moschata] >XP_023552392.1 calcium-binding protein PBP1 [Cucurbita pepo subsp. pepo] >KAG6577399.1 Calcium-binding protein KRP1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015477.1 Calcium-binding protein PBP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 245.7 bits (626), Expect = 1.9e-61
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLA 60
           MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLA
Sbjct: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLA 60

Query: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGFC 119
           DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGFC
Sbjct: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGFC 118

[Close]

BLAST of CmoCh16G008680.1 vs. NCBI nr
Match: XP_022985275.1 (calcium-binding protein PBP1 [Cucurbita maxima])

HSP 1 Score: 238.0 bits (606), Expect = 4.0e-59
Identity = 115/117 (98.29%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLA 60
           MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDF SLKRNAAALGLA
Sbjct: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFSSLKRNAAALGLA 60

Query: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGF 118
           DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDAL+QEFKGF
Sbjct: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALSQEFKGF 117

[Close]

BLAST of CmoCh16G008680.1 vs. NCBI nr
Match: XP_008452312.1 (PREDICTED: calcium-binding protein PBP1 [Cucumis melo])

HSP 1 Score: 227.6 bits (579), Expect = 5.5e-56
Identity = 109/118 (92.37%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLA 60
           MAF A++SGFEDWLP MAERLGGEGLIGELCNGFNLL DREKGVIDFESLKRNAAALGLA
Sbjct: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 60

Query: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGFC 119
           DLSDEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLE+AL+QEFK FC
Sbjct: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALHQEFKDFC 118

[Close]

BLAST of CmoCh16G008680.1 vs. NCBI nr
Match: XP_038903612.1 (calcium-binding protein KRP1-like [Benincasa hispida])

HSP 1 Score: 227.3 bits (578), Expect = 7.1e-56
Identity = 108/118 (91.53%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLA 60
           MAF A+QSGF+DWLP MA+RLGGEGLIGELCNGFNLL DREKGVIDFESLKRNAAALGLA
Sbjct: 29  MAFGAEQSGFQDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA 88

Query: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGFC 119
           DLSDEDLR MLREGDFDGDGALNQMEFCVLMFRLSP+LMDESWFLLE+ALNQEFK FC
Sbjct: 89  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESWFLLEEALNQEFKDFC 146

[Close]

BLAST of CmoCh16G008680.1 vs. NCBI nr
Match: XP_004149304.1 (calcium-binding protein KRP1 [Cucumis sativus] >KGN56198.1 hypothetical protein Csa_010363 [Cucumis sativus])

HSP 1 Score: 222.6 bits (566), Expect = 1.8e-54
Identity = 106/118 (89.83%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MAFVADQSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLA 60
           MAF A++SGFEDWLP MAERLGGEGLIGELCNGFNLL +REKGVIDFESLKRNAAALGL 
Sbjct: 1   MAFSAEKSGFEDWLPTMAERLGGEGLIGELCNGFNLLMNREKGVIDFESLKRNAAALGLG 60

Query: 61  DLSDEDLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEFKGFC 119
           DLSDEDLR MLREGDFDGDGALNQMEFCVLMFRLSPELM+ESWFLLE+AL+QEFK FC
Sbjct: 61  DLSDEDLRSMLREGDFDGDGALNQMEFCVLMFRLSPELMEESWFLLEEALHQEFKDFC 118

[Close]

BLAST of CmoCh16G008680.1 vs. TAIR 10
Match: AT4G27280.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.1e-38
Identity = 78/109 (71.56%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 7   QSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAA-LGLADLSDE 66
           Q  F D+LP MA  LGGEGLIGELCNGF LL DREKGVI FESL+RNAAA LGL DL+DE
Sbjct: 16  QPNFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDE 75

Query: 67  DLREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEF 115
           D+R M++EGDFD DGALNQMEFCVLMFRLSP+LM+ S  L+ + + +EF
Sbjct: 76  DVRCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

[Close]

BLAST of CmoCh16G008680.1 vs. TAIR 10
Match: AT5G54490.1 (pinoid-binding protein 1 )

HSP 1 Score: 142.9 bits (359), Expect = 1.6e-34
Identity = 68/106 (64.15%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 10  FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAA-ALGLADLSDEDLR 69
           F+D+ P MA +LGGEGLI E+C GF LL D++KGVI FESL+RNA+  LGL DL+D+D+R
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 70  EMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQEF 115
            M+ EGDFD DGALNQMEFCVLMFRLSPELM+ S  ++ + + +EF
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]

BLAST of CmoCh16G008680.1 vs. TAIR 10
Match: AT2G46600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 122.1 bits (305), Expect = 3.0e-28
Identity = 59/107 (55.14%), Postives = 78/107 (72.90%), Query Frame = 0


Query: 7   QSGFEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADLSDED 66
           ++ +ED LP MAE++  E  + ELC GF+LL D E+ +I  ESL+RN+  LG+  +S ED
Sbjct: 19  ETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKED 78

Query: 67  LREMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEDALNQE 114
            + M+REGD DGDGALNQ EFCVLM RLSPE+M+++   LE AL QE
Sbjct: 79  AQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125

[Close]

BLAST of CmoCh16G008680.1 vs. TAIR 10
Match: AT4G37010.1 (centrin 2 )

HSP 1 Score: 50.1 bits (118), Expect = 1.5e-06
Identity = 31/93 (33.33%), Postives = 46/93 (49.46%), Query Frame = 0


Query: 6   DQSG---FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADL 65
           +QSG   F++++  M  + G    I EL   F ++     G I    +K  A  LG  + 
Sbjct: 74  NQSGAIDFDEFVHMMTTKFGERDSIDELSKAFKIIDHDNNGKISPRDIKMIAKELG-ENF 133

Query: 66  SDEDLREMLREGDFDGDGALNQMEFCVLMFRLS 96
           +D D+ EM+ E D D DG +N  EF  +M R S
Sbjct: 134 TDNDIEEMIEEADRDKDGEVNLEEFMKMMKRTS 165

[Close]

BLAST of CmoCh16G008680.1 vs. TAIR 10
Match: AT4G37010.2 (centrin 2 )

HSP 1 Score: 50.1 bits (118), Expect = 1.5e-06
Identity = 31/93 (33.33%), Postives = 46/93 (49.46%), Query Frame = 0


Query: 6   DQSG---FEDWLPKMAERLGGEGLIGELCNGFNLLKDREKGVIDFESLKRNAAALGLADL 65
           +QSG   F++++  M  + G    I EL   F ++     G I    +K  A  LG  + 
Sbjct: 78  NQSGAIDFDEFVHMMTTKFGERDSIDELSKAFKIIDHDNNGKISPRDIKMIAKELG-ENF 137

Query: 66  SDEDLREMLREGDFDGDGALNQMEFCVLMFRLS 96
           +D D+ EM+ E D D DG +N  EF  +M R S
Sbjct: 138 TDNDIEEMIEEADRDKDGEVNLEEFMKMMKRTS 169

The following BLAST results are available for this feature:

BLAST of CmoCh16G008680.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81831	1.6e-37	71.56	Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1	[more]
Q9LSQ6	2.3e-33	64.15	Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1	[more]
Q9ZPX9	4.2e-27	55.14	Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2	[more]
Q2TBN3	1.6e-10	41.86	Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1	[more]
Q9R1K9	3.6e-10	40.70	Centrin-2 OS=Mus musculus OX=10090 GN=Cetn2 PE=1 SV=1	[more]

BLAST of CmoCh16G008680.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EN05	9.4e-62	100.00	calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111435976 ...	[more]
A0A6J1JAW3	2.0e-59	98.29	calcium-binding protein PBP1 OS=Cucurbita maxima OX=3661 GN=LOC111483314 PE=4 SV...	[more]
A0A1S3BSY1	2.6e-56	92.37	calcium-binding protein PBP1 OS=Cucumis melo OX=3656 GN=LOC103493375 PE=4 SV=1	[more]
A0A0A0L347	8.5e-55	89.83	EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099590 PE=...	[more]
A0A6J1CM41	6.5e-47	83.93	calcium-binding protein PBP1 OS=Momordica charantia OX=3673 GN=LOC111012869 PE=4...	[more]

BLAST of CmoCh16G008680.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929391.1	1.9e-61	100.00	calcium-binding protein PBP1-like [Cucurbita moschata] >XP_023552392.1 calcium-b...	[more]
XP_022985275.1	4.0e-59	98.29	calcium-binding protein PBP1 [Cucurbita maxima]	[more]
XP_008452312.1	5.5e-56	92.37	PREDICTED: calcium-binding protein PBP1 [Cucumis melo]	[more]
XP_038903612.1	7.1e-56	91.53	calcium-binding protein KRP1-like [Benincasa hispida]	[more]
XP_004149304.1	1.8e-54	89.83	calcium-binding protein KRP1 [Cucumis sativus] >KGN56198.1 hypothetical protein ...	[more]

BLAST of CmoCh16G008680.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27280.1	1.1e-38	71.56	Calcium-binding EF-hand family protein	[more]
AT5G54490.1	1.6e-34	64.15	pinoid-binding protein 1	[more]
AT2G46600.1	3.0e-28	55.14	Calcium-binding EF-hand family protein	[more]
AT4G37010.1	1.5e-06	33.33	centrin 2	[more]
AT4G37010.2	1.5e-06	33.33	centrin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 66..94 e-value: 0.0024 score: 27.1
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 41..93 e-value: 3.2E-20 score: 71.7
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 62..97 score: 11.361225
None	No IPR available	GENE3D	1.10.238.10		coord: 8..116 e-value: 8.9E-21 score: 75.9
None	No IPR available	PANTHER	PTHR47319:SF6	CALCIUM-BINDING PROTEIN KRP1	coord: 5..117
IPR044205	Calcium-binding protein KIC/PBP1/KRP1	PANTHER	PTHR47319	CALCIUM-BINDING PROTEIN KIC	coord: 5..117
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 75..87
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 26..101

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh16G008680	CmoCh16G008680	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh16G008680.1:exon:7342	CmoCh16G008680.1:exon:7342	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh16G008680.1:cds	CmoCh16G008680.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh16G008680.1	CmoCh16G008680.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding