CmoCh16G003420.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G003420.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor bHLH84-like
Location	Cmo_Chr16: 1580268 .. 1581725 (-)
Sequence length	897
RNA-Seq Expression	CmoCh16G003420.1
Synteny	CmoCh16G003420.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCTATAGGACCCATTTCAGAAAGGGAATGGATATCTCTCAGTGGAGCTTACACAGCTGAGGAGTCTGATTTCATGGCTAATTTGCTCAACAACTATTGTCTTCCAAACGAGCTCAATCCCGGTTCGAGCTCGGCCGTCCCGTCTGCTTCTTTGGCCATGGCACCCATGGATGAACCTTCTTACTATAGTAATCATTATTACACCTTGAATGAGAATGATTCTCACCCTCCTTGGTTGCCTAATAATGGTGCCTCTTTGTCCTTGGATTTCTCGATGGAGGATGTTCGGAATGGCGATCGATTGGACGATAGCGGTTCGAGTCGAAAAACAAGGCAATGCAGGCTGCAACAATTCCCTGCTGGAAGCTCACAGCCGGAAAAGAGAGCTGAGATCACGGTGGAAGAAGCTACGAAGGACGATAAAGTTGCATCGACACCAGTTGACACCAACTCGAGGAAGCGGTCCCCGAGTTCGTATAATGTAAGATTGATAATTCGAACTCATTTGTTTCTGTGATTCTTATGGTTAGGAATCACGAGTCTCTACAATAGTATGATATTGTGCACTTTGAGCATAAGCTCTCGTAGATTTGCTTTGAGCTTTCTCAAAAGGCCTCGTACCAATCAAGATGTATTCCTAAAATTAGTCAATGTGGGATTCCCTCGCAACGATCCTCAACACTAATGGCAATGCGCTTTGTGATTTGGTAATGAAGGTCGAAAAGACGAAGACGAGTACGAGGAACACGAGGGCACGGAAGAGCTCGAAGATTGCTTCGGGTAGCTGCAATGAAGAGGAGGATCACATTGTTAGTCCAAATGGGCTGTGCACAAGCAGCTTCAGCTCAGAAGATGACTGTAATGGTGGGATCACTTCCAGCTCAACCCTGAGCTCAAGTGGAAAGCCAAGAGCCAGTAGAGGCTCAGCCACAGACCCTCAAAGCCTCTATGCAAGGGTAACCCTCTAAACCACTCCGATCGCTATTGTTAAACTCCCGAACTCCCGTTGCCATACTTGAACTCTCGAACTCTGATCTAACATGCAACTCCTTTAAATTTTCCTTCAGAAAAGGAGAGAAAGAATCAATGAAAGGTTGAGAATGTTACAAAGCCTCGTCCCGAACGGCACGAAGGTAGGCCAATCTCACACGAACATATACGATCTCGGTGTTTATCACACGATCAACAATATCTTGGTTTGTGCAGGTTGATATCAGTACAATGCTTGAAGAAGCAGTTGAGTATGTGAAGTTCTTGCAGCTTCAAATCAAGGTAATTTTTGAATGAACAAACCATTTAATTCCATAATTTTCAAGGCTTGATTTTGTGTTGAATCCAATGTTTGCAGCTGTTGAGCTCTGATGATCTATGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAACTTGAAGCTCATGAAACAAGACAATGCATCACAATAG

mRNA sequence

ATGGAACCTATAGGACCCATTTCAGAAAGGGAATGGATATCTCTCAGTGGAGCTTACACAGCTGAGGAGTCTGATTTCATGGCTAATTTGCTCAACAACTATTGTCTTCCAAACGAGCTCAATCCCGGTTCGAGCTCGGCCGTCCCGTCTGCTTCTTTGGCCATGGCACCCATGGATGAACCTTCTTACTATAGTAATCATTATTACACCTTGAATGAGAATGATTCTCACCCTCCTTGGTTGCCTAATAATGGTGCCTCTTTGTCCTTGGATTTCTCGATGGAGGATGTTCGGAATGGCGATCGATTGGACGATAGCGGTTCGAGTCGAAAAACAAGGCAATGCAGGCTGCAACAATTCCCTGCTGGAAGCTCACAGCCGGAAAAGAGAGCTGAGATCACGGTGGAAGAAGCTACGAAGGACGATAAAGTTGCATCGACACCAGTTGACACCAACTCGAGGAAGCGGTCCCCGAGTTCGTATAATGTCGAAAAGACGAAGACGAGTACGAGGAACACGAGGGCACGGAAGAGCTCGAAGATTGCTTCGGGTAGCTGCAATGAAGAGGAGGATCACATTGTTAGTCCAAATGGGCTGTGCACAAGCAGCTTCAGCTCAGAAGATGACTGTAATGGTGGGATCACTTCCAGCTCAACCCTGAGCTCAAGTGGAAAGCCAAGAGCCAGTAGAGGCTCAGCCACAGACCCTCAAAGCCTCTATGCAAGGGTTGATATCAGTACAATGCTTGAAGAAGCAGTTGAGTATGTGAAGTTCTTGCAGCTTCAAATCAAGCTGTTGAGCTCTGATGATCTATGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAACTTGAAGCTCATGAAACAAGACAATGCATCACAATAG

Coding sequence (CDS)

ATGGAACCTATAGGACCCATTTCAGAAAGGGAATGGATATCTCTCAGTGGAGCTTACACAGCTGAGGAGTCTGATTTCATGGCTAATTTGCTCAACAACTATTGTCTTCCAAACGAGCTCAATCCCGGTTCGAGCTCGGCCGTCCCGTCTGCTTCTTTGGCCATGGCACCCATGGATGAACCTTCTTACTATAGTAATCATTATTACACCTTGAATGAGAATGATTCTCACCCTCCTTGGTTGCCTAATAATGGTGCCTCTTTGTCCTTGGATTTCTCGATGGAGGATGTTCGGAATGGCGATCGATTGGACGATAGCGGTTCGAGTCGAAAAACAAGGCAATGCAGGCTGCAACAATTCCCTGCTGGAAGCTCACAGCCGGAAAAGAGAGCTGAGATCACGGTGGAAGAAGCTACGAAGGACGATAAAGTTGCATCGACACCAGTTGACACCAACTCGAGGAAGCGGTCCCCGAGTTCGTATAATGTCGAAAAGACGAAGACGAGTACGAGGAACACGAGGGCACGGAAGAGCTCGAAGATTGCTTCGGGTAGCTGCAATGAAGAGGAGGATCACATTGTTAGTCCAAATGGGCTGTGCACAAGCAGCTTCAGCTCAGAAGATGACTGTAATGGTGGGATCACTTCCAGCTCAACCCTGAGCTCAAGTGGAAAGCCAAGAGCCAGTAGAGGCTCAGCCACAGACCCTCAAAGCCTCTATGCAAGGGTTGATATCAGTACAATGCTTGAAGAAGCAGTTGAGTATGTGAAGTTCTTGCAGCTTCAAATCAAGCTGTTGAGCTCTGATGATCTATGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAACTTGAAGCTCATGAAACAAGACAATGCATCACAATAG

Protein sequence

MEPIGPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDEPSYYSNHYYTLNENDSHPPWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQFPAGSSQPEKRAEITVEEATKDDKVASTPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLYARVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ

Homology

[Close]

BLAST of CmoCh16G003420.1 vs. ExPASy Swiss-Prot
Match: Q7XHI9 (Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-25
Identity = 119/327 (36.39%), Postives = 157/327 (48.01%), Query Frame = 0


Query: 11  EWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDEPSYYSNHYYT 70
           EW +  G    EE+DFM  LL +Y    E   G SS+  +A+L  A   + S ++  +  
Sbjct: 6   EWSTGLGGIYTEEADFMNQLLASY----EQPCGGSSSETTATLT-AYHHQGSQWNGGFCF 65

Query: 71  LNENDSHPPWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQFPAGSSQP-EK 130
             E+ S+  +          +  MED      L   G   +T +C   ++   S  P E 
Sbjct: 66  SQESSSYSGYCAAMPRQEEDNNGMEDATINTNLYLVG--EETSECDATEYSGKSLLPLET 125

Query: 131 RAEITVEEATKDDKVASTPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSKIASGSCNE- 190
            AE       + +   +T  D     +  SS    +  T+ +N RA K+ +  S  C E 
Sbjct: 126 VAENHDHSMLQPENSLTTTTDEKMFNQCESSKKRTRATTTDKNKRANKARR--SQKCVEM 185

Query: 191 --------EEDHIVSPNGLCTS-------SFSSEDDCNGGIT--------SSSTLSSSGK 250
                   EE++     G   +       +  S+D+ NGG T         S  L+ +GK
Sbjct: 186 SGENENSGEEEYTEKAAGKRKTKPLKPQKTCCSDDESNGGDTFLSKEDGEDSKALNLNGK 245

Query: 251 PRASRGSATDPQSLYAR----------------------VDISTMLEEAVEYVKFLQLQI 291
            RASRG+ATDPQSLYAR                      VDISTMLEEAV+YVKFLQLQI
Sbjct: 246 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQI 305

[Close]

BLAST of CmoCh16G003420.1 vs. ExPASy Swiss-Prot
Match: Q84WK0 (Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.4e-25
Identity = 123/359 (34.26%), Postives = 165/359 (45.96%), Query Frame = 0


Query: 11  EWI-SLSGAYT--AEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDEPSYYSNH 70
           EW  +L G YT   EE+DFM  LL +Y  P     GSSS   ++            + NH
Sbjct: 6   EWSNNLGGMYTYATEEADFMNQLLASYDHP---GTGSSSGAAASGDHQGLYWNLGSHHNH 65

Query: 71  YYTLNENDSH--------------------PPWLPNNGASLSLDFSMEDVRNGDRLDDSG 130
              ++E  S                     PP +  N  + ++DF MEDV         G
Sbjct: 66  LSLVSEAGSFCFSQESSSYSAGNSGYYTVVPPTVEEN-QNETMDFGMEDVTINTNSYLVG 125

Query: 131 SSRKTRQCRLQQFPAGSSQPEKRAEITVEEATKDD-------KVASTPVDTNSRKRSPSS 190
              +T +C ++++ +G +      E  VE    ++        V +T   T S+KRS ++
Sbjct: 126 --EETSECDVEKYSSGKTL--MPLETVVENHDDEESLLQSEISVTTTKSLTGSKKRSRAT 185

Query: 191 YNVEKTKTSTRNTRARKSSKIASGS------------------------------CNEEE 250
            + +K K +  N RA+K+ +++  +                              C EEE
Sbjct: 186 -STDKNKRARVNKRAQKNVEMSGDNNEGEEEEGETKLKKRKNGAMMSRQNSSTTFCTEEE 245

Query: 251 DHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLYAR-------- 288
            +    +G    S S EDD       S  L+ +GK RASRG+ATDPQSLYAR        
Sbjct: 246 SNCADQDGGGEDSSSKEDD------PSKALNLNGKTRASRGAATDPQSLYARKRRERINE 305

[Close]

BLAST of CmoCh16G003420.1 vs. ExPASy Swiss-Prot
Match: Q3E7L7 (Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.7e-19
Identity = 65/143 (45.45%), Postives = 88/143 (61.54%), Query Frame = 0


Query: 174 RARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDDCNG-GITSSSTLSSSGKPRASRGS 233
           + RK  K++S S    E      +G   SS++S DD    G+ S+++ S   K +A+RG 
Sbjct: 79  KPRKKQKLSSESNLVTEPKTAWRDGQSLSSYNSSDDEKALGLVSNTSKSLKRKAKANRGI 138

Query: 234 ATDPQSLYAR----------------------VDISTMLEEAVEYVKFLQLQIKLLSSDD 293
           A+DPQSLYAR                      VDISTMLE+AV YVKFLQLQIKLLSS+D
Sbjct: 139 ASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSED 198

[Close]

BLAST of CmoCh16G003420.1 vs. ExPASy Swiss-Prot
Match: Q8LEG1 (Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.2e-19
Identity = 75/172 (43.60%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 150 DTNSRKRSPSSY-NVEKTKTSTRNTR-----ARKSSKIASGSCNEEEDHIVSPNGLCTSS 209
           +T+S KR      N+ KT ++   TR     ++K  +++S S   +E +    +G   S+
Sbjct: 92  ETSSLKRKLLDVENLCKTNSNCDVTRQELAKSKKKQRVSSESNTVDESNTNWVDGQSLSN 151

Query: 210 FSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLYAR--------------------- 269
            SS+D+       +S  S  GK RA++G+ATDPQSLYAR                     
Sbjct: 152 -SSDDE------KASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGT 211

Query: 270 -VDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQ 294
            VDISTMLEEAV YVKFLQLQIKLLSSDDLWMYAP+AYNG+D+G +  L+ +
Sbjct: 212 KVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPLAYNGLDMGFHHNLLSR 256

[Close]

BLAST of CmoCh16G003420.1 vs. ExPASy Swiss-Prot
Match: Q2QQ32 (Transcription factor BHLH133 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH133 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-10
Identity = 30/39 (76.92%), Postives = 38/39 (97.44%), Query Frame = 0


Query: 242 RVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYN 281
           +VDISTMLEEA++YVKFL LQIKLLSSD++WMYAP+A++
Sbjct: 146 KVDISTMLEEAIQYVKFLHLQIKLLSSDEMWMYAPLAFD 184

[Close]

BLAST of CmoCh16G003420.1 vs. ExPASy TrEMBL
Match: A0A6J1E5L2 (transcription factor bHLH84-like OS=Cucurbita moschata OX=3662 GN=LOC111430802 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.5e-156
Identity = 298/320 (93.12%), Postives = 298/320 (93.12%), Query Frame = 0


Query: 1   MEPIGPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDE 60
           MEPIGPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDE
Sbjct: 1   MEPIGPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDE 60

Query: 61  PSYYSNHYYTLNENDSHPPWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQF 120
           PSYYSNHYYTLNENDSHPPWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQF
Sbjct: 61  PSYYSNHYYTLNENDSHPPWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQF 120

Query: 121 PAGSSQPEKRAEITVEEATKDDKVASTPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSK 180
           PAGSSQPEKRAEITVEEATKDDKVASTPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSK
Sbjct: 121 PAGSSQPEKRAEITVEEATKDDKVASTPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSK 180

Query: 181 IASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLY 240
           IASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLY
Sbjct: 181 IASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLY 240

Query: 241 AR----------------------VDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA 299
           AR                      VDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA
Sbjct: 241 ARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA 300

[Close]

BLAST of CmoCh16G003420.1 vs. ExPASy TrEMBL
Match: A0A6J1JBN3 (transcription factor bHLH85-like OS=Cucurbita maxima OX=3661 GN=LOC111482989 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 7.4e-148
Identity = 286/320 (89.38%), Postives = 287/320 (89.69%), Query Frame = 0


Query: 1   MEPIGPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDE 60
           MEPIGPISEREWISLSGAYTAEESDFMAN LNNYCLPNELNP SSSAVPSA LAMAPMDE
Sbjct: 1   MEPIGPISEREWISLSGAYTAEESDFMANFLNNYCLPNELNPSSSSAVPSACLAMAPMDE 60

Query: 61  PSYYSNHYYTLNENDSHPPWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQF 120
           PSYY+N YYTLNENDSHP WLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQF
Sbjct: 61  PSYYNNPYYTLNENDSHPLWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQF 120

Query: 121 PAGSSQPEKRAEITVEEATKDDKVASTPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSK 180
           PAGSSQPEKRAEI VEEATKDDKVA TPVDTNSRKRS SSYNVEKTKTSTRNTRARKSSK
Sbjct: 121 PAGSSQPEKRAEIMVEEATKDDKVAPTPVDTNSRKRSLSSYNVEKTKTSTRNTRARKSSK 180

Query: 181 IASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLY 240
           IAS SCNEEEDHIVSPNGLCTSSFSSEDDCNGGIT SSTLSSSGKPRASRGSATDPQSLY
Sbjct: 181 IASASCNEEEDHIVSPNGLCTSSFSSEDDCNGGITPSSTLSSSGKPRASRGSATDPQSLY 240

Query: 241 AR----------------------VDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA 299
           AR                      VDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA
Sbjct: 241 ARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA 300

[Close]

BLAST of CmoCh16G003420.1 vs. ExPASy TrEMBL
Match: A0A6J1D5B1 (transcription factor bHLH84-like OS=Momordica charantia OX=3673 GN=LOC111017743 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 6.6e-96
Identity = 231/371 (62.26%), Postives = 256/371 (69.00%), Query Frame = 0


Query: 1   MEPIGPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAV---------PSA 60
           ME IG ISEREWISLSG YTAEESDFM NLL+NYCLPNELN G S  +         PS 
Sbjct: 1   MESIGAISEREWISLSGTYTAEESDFMVNLLSNYCLPNELNSGLSLEIPPSYWAANEPSP 60

Query: 61  SLAMAPMDEPSYYS----------------NHYYTLNENDSHPPWLPNNGASLSLDFSME 120
           +LAMA M+EPSYYS                N+ Y+L  NDSHP W P NGASLSLDFSME
Sbjct: 61  ALAMAAMEEPSYYSSDASDSSNIYGLPQGNNNPYSL--NDSHPLWFP-NGASLSLDFSME 120

Query: 121 DVRNGD--RL-DDSGSSRKTRQCRLQQFPAG----------SSQPEKRAEITVEEATKDD 180
           DV N D  RL DD+GSS+KTRQCRLQQ P            SSQP++R E+T EEA +DD
Sbjct: 121 DVGNDDSARLDDDNGSSQKTRQCRLQQSPTNSAVAAAINGKSSQPKRRTEVTAEEAMRDD 180

Query: 181 KVAST-PVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSKIASGSCNEEEDHIVSPNGLCT 240
           +VA T  +D N +KRSPS  +VEKTK   R+ R+RKS K+ASGS   EEDHIVSPNG  T
Sbjct: 181 EVAPTISIDDNPKKRSPSLPDVEKTK---RSVRSRKSPKLASGSSCNEEDHIVSPNGQST 240

Query: 241 SSFSSEDDCNG------GITS------SSTLSSSGKPRASRGSATDPQSLYAR------- 299
           SSFSSEDDCN       G+TS      S++L+S+GKPRASRGSATDPQSLYAR       
Sbjct: 241 SSFSSEDDCNEPQEINCGVTSSTNSKGSASLTSNGKPRASRGSATDPQSLYARKRRERIN 300

[Close]

BLAST of CmoCh16G003420.1 vs. ExPASy TrEMBL
Match: A0A0A0KT10 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000890 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 1.1e-95
Identity = 230/347 (66.28%), Postives = 255/347 (73.49%), Query Frame = 0


Query: 5   GPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDEPSYY 64
           G ISEREWISLSGAYTAEESDFMANLL+NYC+PNELN   S  +PS+  A +  +EPSYY
Sbjct: 3   GAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWASS--NEPSYY 62

Query: 65  ------SNHYYTLNE---------NDSHPP-WLPNNGASLSLDFSMEDVRNGDRLDDSGS 124
                 S++ Y L++         NDS+P  WLPNNGASLSLDFS+EDVRN D LDD+GS
Sbjct: 63  SSDASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIEDVRNADCLDDNGS 122

Query: 125 S-RKTRQC-RLQQFPAG------SSQPEKRA-EITVEEATKDDKVASTPVDTNSRKRSPS 184
           + RKTRQC RLQQ PA       SSQP++RA ++ VEEA +DDKV    V+  SRKR  S
Sbjct: 123 NIRKTRQCSRLQQSPADSVVNGKSSQPKRRANDVMVEEAMRDDKVGPVSVENFSRKRPQS 182

Query: 185 SYNVEKTKTSTRNTRARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDDC------NGG 244
             +VEKTK   R+ RARK+SKIASGSCN EED IVSPNG CTSSFSSEDDC      NGG
Sbjct: 183 LLDVEKTK---RSGRARKTSKIASGSCN-EEDQIVSPNGQCTSSFSSEDDCNEAQENNGG 242

Query: 245 ITSSSTLSSSGKPRASRGSATDPQSLYAR----------------------VDISTMLEE 299
           ITSSST  S+GKPRASRGSATDPQSLYAR                      VDISTMLEE
Sbjct: 243 ITSSST--SNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEE 302

[Close]

BLAST of CmoCh16G003420.1 vs. ExPASy TrEMBL
Match: A0A5D3E098 (Transcription factor bHLH84-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00700 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.8e-94
Identity = 227/347 (65.42%), Postives = 254/347 (73.20%), Query Frame = 0


Query: 5   GPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDEPSYY 64
           G ISEREWISLSGAYTAEESDFMANLLNNYC+PNELN   +  +PS+  A +  +EPSYY
Sbjct: 4   GAISEREWISLSGAYTAEESDFMANLLNNYCIPNELNSDLTLEIPSSYWASS--NEPSYY 63

Query: 65  ------SNHYYTLNE---------NDSHPPWLPNNGA-SLSLDFSMEDVRNGDRLDDSGS 124
                 S++ Y L++         N+S+P W+PNNGA SLSLDFS+EDV N D LDD+GS
Sbjct: 64  SSDASDSSNIYALSQPNNNLPYTFNESNPLWMPNNGASSLSLDFSVEDVGNADCLDDNGS 123

Query: 125 S-RKTRQC-RLQQFPAG------SSQPEKRAE-ITVEEATKDDKVASTPVDTNSRKRSPS 184
           + RKTRQC RLQQ PA       SSQP++RA+ + VEEA +DDKV    V+  SRKR  S
Sbjct: 124 NIRKTRQCSRLQQSPADSVVNGKSSQPKRRADGVMVEEAMRDDKVGPVSVENASRKRPQS 183

Query: 185 SYNVEKTKTSTRNTRARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDDC------NGG 244
             +VEKTK   R+ RARK+SKIASGSCN EED IVSPNG CTSSFSSEDDC      NGG
Sbjct: 184 LLDVEKTK---RSGRARKTSKIASGSCN-EEDQIVSPNGQCTSSFSSEDDCNEAQEINGG 243

Query: 245 ITSSSTLSSSGKPRASRGSATDPQSLYAR----------------------VDISTMLEE 299
           ITSSST  S+GKPRASRGSATDPQSLYAR                      VDISTMLEE
Sbjct: 244 ITSSST--SNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEE 303

[Close]

BLAST of CmoCh16G003420.1 vs. NCBI nr
Match: XP_022922981.1 (transcription factor bHLH84-like [Cucurbita moschata])

HSP 1 Score: 562.0 bits (1447), Expect = 3.1e-156
Identity = 298/320 (93.12%), Postives = 298/320 (93.12%), Query Frame = 0


Query: 1   MEPIGPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDE 60
           MEPIGPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDE
Sbjct: 1   MEPIGPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDE 60

Query: 61  PSYYSNHYYTLNENDSHPPWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQF 120
           PSYYSNHYYTLNENDSHPPWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQF
Sbjct: 61  PSYYSNHYYTLNENDSHPPWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQF 120

Query: 121 PAGSSQPEKRAEITVEEATKDDKVASTPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSK 180
           PAGSSQPEKRAEITVEEATKDDKVASTPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSK
Sbjct: 121 PAGSSQPEKRAEITVEEATKDDKVASTPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSK 180

Query: 181 IASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLY 240
           IASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLY
Sbjct: 181 IASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLY 240

Query: 241 AR----------------------VDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA 299
           AR                      VDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA
Sbjct: 241 ARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA 300

[Close]

BLAST of CmoCh16G003420.1 vs. NCBI nr
Match: KAG6576921.1 (Transcription factor basic helix-loop-helix 84, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 558.1 bits (1437), Expect = 4.5e-155
Identity = 297/320 (92.81%), Postives = 297/320 (92.81%), Query Frame = 0


Query: 1   MEPIGPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDE 60
           MEPIGPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDE
Sbjct: 1   MEPIGPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDE 60

Query: 61  PSYYSNHYYTLNENDSHPPWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQF 120
           PSYYSNHYYTLNENDSHP WLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQF
Sbjct: 61  PSYYSNHYYTLNENDSHPLWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQF 120

Query: 121 PAGSSQPEKRAEITVEEATKDDKVASTPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSK 180
           PAGSSQPEKRAEITVEEATKDDKVASTPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSK
Sbjct: 121 PAGSSQPEKRAEITVEEATKDDKVASTPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSK 180

Query: 181 IASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLY 240
           IASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLY
Sbjct: 181 IASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLY 240

Query: 241 AR----------------------VDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA 299
           AR                      VDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA
Sbjct: 241 ARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA 300

[Close]

BLAST of CmoCh16G003420.1 vs. NCBI nr
Match: XP_023553185.1 (transcription factor bHLH84-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 536.2 bits (1380), Expect = 1.8e-148
Identity = 289/321 (90.03%), Postives = 290/321 (90.34%), Query Frame = 0


Query: 1   MEPIGPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDE 60
           MEPIGPISEREWISL+GAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSA LAMAPMDE
Sbjct: 1   MEPIGPISEREWISLTGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSACLAMAPMDE 60

Query: 61  PSYYSNHYYTLNENDSHPPWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQF 120
           PSYYSN YYTLNENDSHP WLPNNGASLSLDFSMEDVRNGDRLDD GSSRKTRQCRLQQF
Sbjct: 61  PSYYSNPYYTLNENDSHPLWLPNNGASLSLDFSMEDVRNGDRLDDCGSSRKTRQCRLQQF 120

Query: 121 PAGSSQPEKRAEITVEEATKDDKVASTPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSK 180
           PAGSSQPEKRAEITVE ATKDDKVA TPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSK
Sbjct: 121 PAGSSQPEKRAEITVEVATKDDKVAPTPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSK 180

Query: 181 IASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLY 240
           I S SCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLY
Sbjct: 181 IGSASCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLY 240

Query: 241 AR----------------------VDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA 299
           AR                      VDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA
Sbjct: 241 ARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA 300

[Close]

BLAST of CmoCh16G003420.1 vs. NCBI nr
Match: XP_022984818.1 (transcription factor bHLH85-like [Cucurbita maxima])

HSP 1 Score: 533.1 bits (1372), Expect = 1.5e-147
Identity = 286/320 (89.38%), Postives = 287/320 (89.69%), Query Frame = 0


Query: 1   MEPIGPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDE 60
           MEPIGPISEREWISLSGAYTAEESDFMAN LNNYCLPNELNP SSSAVPSA LAMAPMDE
Sbjct: 1   MEPIGPISEREWISLSGAYTAEESDFMANFLNNYCLPNELNPSSSSAVPSACLAMAPMDE 60

Query: 61  PSYYSNHYYTLNENDSHPPWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQF 120
           PSYY+N YYTLNENDSHP WLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQF
Sbjct: 61  PSYYNNPYYTLNENDSHPLWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQF 120

Query: 121 PAGSSQPEKRAEITVEEATKDDKVASTPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSK 180
           PAGSSQPEKRAEI VEEATKDDKVA TPVDTNSRKRS SSYNVEKTKTSTRNTRARKSSK
Sbjct: 121 PAGSSQPEKRAEIMVEEATKDDKVAPTPVDTNSRKRSLSSYNVEKTKTSTRNTRARKSSK 180

Query: 181 IASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLY 240
           IAS SCNEEEDHIVSPNGLCTSSFSSEDDCNGGIT SSTLSSSGKPRASRGSATDPQSLY
Sbjct: 181 IASASCNEEEDHIVSPNGLCTSSFSSEDDCNGGITPSSTLSSSGKPRASRGSATDPQSLY 240

Query: 241 AR----------------------VDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA 299
           AR                      VDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA
Sbjct: 241 ARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIA 300

[Close]

BLAST of CmoCh16G003420.1 vs. NCBI nr
Match: KAG7014946.1 (Transcription factor bHLH85, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 523.5 bits (1347), Expect = 1.2e-144
Identity = 290/344 (84.30%), Postives = 291/344 (84.59%), Query Frame = 0


Query: 1   MEPIGPISEREWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSA-SLAMAPMD 60
           MEPIGPISEREWISL+GAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSA SLAMAPMD
Sbjct: 1   MEPIGPISEREWISLTGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASSLAMAPMD 60

Query: 61  EPSYYSNHYYTLNENDSHPPWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQ 120
           EPSYYSNHYYTLNENDSHP WLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQ
Sbjct: 61  EPSYYSNHYYTLNENDSHPLWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQ 120

Query: 121 FPAGSSQPEKRAEITVEEATKDDKVASTPVDTNSRKRSPSSYN----------------- 180
           FPAGSSQPEKRAEITVEEATKDDKVA TPVDTNSRKRSPSSYN                 
Sbjct: 121 FPAGSSQPEKRAEITVEEATKDDKVAPTPVDTNSRKRSPSSYNSMWDSLSTILNTNDIAL 180

Query: 181 ------VEKTKTSTRNTRARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITS 240
                 VEKTK STRNTRARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITS
Sbjct: 181 CDLIMKVEKTKMSTRNTRARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDDCNGGITS 240

Query: 241 SSTLSSSGKPRASRGSATDPQSLYAR----------------------VDISTMLEEAVE 299
               SSSGKPRASRGSATDPQSLYAR                      VDISTMLEEAVE
Sbjct: 241 ----SSSGKPRASRGSATDPQSLYARKRRERINERLRMLQSLVPNGTKVDISTMLEEAVE 300

[Close]

BLAST of CmoCh16G003420.1 vs. TAIR 10
Match: AT2G14760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-26
Identity = 119/327 (36.39%), Postives = 157/327 (48.01%), Query Frame = 0


Query: 11  EWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDEPSYYSNHYYT 70
           EW +  G    EE+DFM  LL +Y    E   G SS+  +A+L  A   + S ++  +  
Sbjct: 6   EWSTGLGGIYTEEADFMNQLLASY----EQPCGGSSSETTATLT-AYHHQGSQWNGGFCF 65

Query: 71  LNENDSHPPWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQFPAGSSQP-EK 130
             E+ S+  +          +  MED      L   G   +T +C   ++   S  P E 
Sbjct: 66  SQESSSYSGYCAAMPRQEEDNNGMEDATINTNLYLVG--EETSECDATEYSGKSLLPLET 125

Query: 131 RAEITVEEATKDDKVASTPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSKIASGSCNE- 190
            AE       + +   +T  D     +  SS    +  T+ +N RA K+ +  S  C E 
Sbjct: 126 VAENHDHSMLQPENSLTTTTDEKMFNQCESSKKRTRATTTDKNKRANKARR--SQKCVEM 185

Query: 191 --------EEDHIVSPNGLCTS-------SFSSEDDCNGGIT--------SSSTLSSSGK 250
                   EE++     G   +       +  S+D+ NGG T         S  L+ +GK
Sbjct: 186 SGENENSGEEEYTEKAAGKRKTKPLKPQKTCCSDDESNGGDTFLSKEDGEDSKALNLNGK 245

Query: 251 PRASRGSATDPQSLYAR----------------------VDISTMLEEAVEYVKFLQLQI 291
            RASRG+ATDPQSLYAR                      VDISTMLEEAV+YVKFLQLQI
Sbjct: 246 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQI 305

[Close]

BLAST of CmoCh16G003420.1 vs. TAIR 10
Match: AT4G33880.1 (ROOT HAIR DEFECTIVE 6-LIKE 2 )

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-26
Identity = 123/359 (34.26%), Postives = 165/359 (45.96%), Query Frame = 0


Query: 11  EWI-SLSGAYT--AEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDEPSYYSNH 70
           EW  +L G YT   EE+DFM  LL +Y  P     GSSS   ++            + NH
Sbjct: 6   EWSNNLGGMYTYATEEADFMNQLLASYDHP---GTGSSSGAAASGDHQGLYWNLGSHHNH 65

Query: 71  YYTLNENDSH--------------------PPWLPNNGASLSLDFSMEDVRNGDRLDDSG 130
              ++E  S                     PP +  N  + ++DF MEDV         G
Sbjct: 66  LSLVSEAGSFCFSQESSSYSAGNSGYYTVVPPTVEEN-QNETMDFGMEDVTINTNSYLVG 125

Query: 131 SSRKTRQCRLQQFPAGSSQPEKRAEITVEEATKDD-------KVASTPVDTNSRKRSPSS 190
              +T +C ++++ +G +      E  VE    ++        V +T   T S+KRS ++
Sbjct: 126 --EETSECDVEKYSSGKTL--MPLETVVENHDDEESLLQSEISVTTTKSLTGSKKRSRAT 185

Query: 191 YNVEKTKTSTRNTRARKSSKIASGS------------------------------CNEEE 250
            + +K K +  N RA+K+ +++  +                              C EEE
Sbjct: 186 -STDKNKRARVNKRAQKNVEMSGDNNEGEEEEGETKLKKRKNGAMMSRQNSSTTFCTEEE 245

Query: 251 DHIVSPNGLCTSSFSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLYAR-------- 288
            +    +G    S S EDD       S  L+ +GK RASRG+ATDPQSLYAR        
Sbjct: 246 SNCADQDGGGEDSSSKEDD------PSKALNLNGKTRASRGAATDPQSLYARKRRERINE 305

[Close]

BLAST of CmoCh16G003420.1 vs. TAIR 10
Match: AT2G14760.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 3.5e-25
Identity = 119/340 (35.00%), Postives = 157/340 (46.18%), Query Frame = 0


Query: 11  EWISLSGAYTAEESDFMANLLNNYCLPNELNPGSSSAVPSASLAMAPMDEPSYYSNHYYT 70
           EW +  G    EE+DFM  LL +Y    E   G SS+  +A+L  A   + S ++  +  
Sbjct: 6   EWSTGLGGIYTEEADFMNQLLASY----EQPCGGSSSETTATLT-AYHHQGSQWNGGFCF 65

Query: 71  LNENDSHPPWLPNNGASLSLDFSMEDVRNGDRLDDSGSSRKTRQCRLQQFPAGSSQP-EK 130
             E+ S+  +          +  MED      L   G   +T +C   ++   S  P E 
Sbjct: 66  SQESSSYSGYCAAMPRQEEDNNGMEDATINTNLYLVG--EETSECDATEYSGKSLLPLET 125

Query: 131 RAEITVEEATKDDKVASTPVDTNSRKRSPSSYNVEKTKTSTRNTRARKSSKIASGSCNE- 190
            AE       + +   +T  D     +  SS    +  T+ +N RA K+ +  S  C E 
Sbjct: 126 VAENHDHSMLQPENSLTTTTDEKMFNQCESSKKRTRATTTDKNKRANKARR--SQKCVEM 185

Query: 191 --------EEDHIVSPNGLCTS-------SFSSEDDCNGGIT--------SSSTLSSSGK 250
                   EE++     G   +       +  S+D+ NGG T         S  L+ +GK
Sbjct: 186 SGENENSGEEEYTEKAAGKRKTKPLKPQKTCCSDDESNGGDTFLSKEDGEDSKALNLNGK 245

Query: 251 PRASRGSATDPQSLYAR-----------------------------------VDISTMLE 291
            RASRG+ATDPQSLYAR                                   VDISTMLE
Sbjct: 246 TRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTKVDISTMLE 305

[Close]

BLAST of CmoCh16G003420.1 vs. TAIR 10
Match: AT5G43175.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-20
Identity = 65/143 (45.45%), Postives = 88/143 (61.54%), Query Frame = 0


Query: 174 RARKSSKIASGSCNEEEDHIVSPNGLCTSSFSSEDDCNG-GITSSSTLSSSGKPRASRGS 233
           + RK  K++S S    E      +G   SS++S DD    G+ S+++ S   K +A+RG 
Sbjct: 79  KPRKKQKLSSESNLVTEPKTAWRDGQSLSSYNSSDDEKALGLVSNTSKSLKRKAKANRGI 138

Query: 234 ATDPQSLYAR----------------------VDISTMLEEAVEYVKFLQLQIKLLSSDD 293
           A+DPQSLYAR                      VDISTMLE+AV YVKFLQLQIKLLSS+D
Sbjct: 139 ASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSED 198

[Close]

BLAST of CmoCh16G003420.1 vs. TAIR 10
Match: AT1G27740.1 (root hair defective 6-like 4 )

HSP 1 Score: 95.9 bits (237), Expect = 5.8e-20
Identity = 75/172 (43.60%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 150 DTNSRKRSPSSY-NVEKTKTSTRNTR-----ARKSSKIASGSCNEEEDHIVSPNGLCTSS 209
           +T+S KR      N+ KT ++   TR     ++K  +++S S   +E +    +G   S+
Sbjct: 92  ETSSLKRKLLDVENLCKTNSNCDVTRQELAKSKKKQRVSSESNTVDESNTNWVDGQSLSN 151

Query: 210 FSSEDDCNGGITSSSTLSSSGKPRASRGSATDPQSLYAR--------------------- 269
            SS+D+       +S  S  GK RA++G+ATDPQSLYAR                     
Sbjct: 152 -SSDDE------KASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGT 211

Query: 270 -VDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQ 294
            VDISTMLEEAV YVKFLQLQIKLLSSDDLWMYAP+AYNG+D+G +  L+ +
Sbjct: 212 KVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPLAYNGLDMGFHHNLLSR 256

The following BLAST results are available for this feature:

BLAST of CmoCh16G003420.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XHI9	1.5e-25	36.39	Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1	[more]
Q84WK0	3.4e-25	34.26	Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1	[more]
Q3E7L7	1.7e-19	45.45	Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=...	[more]
Q8LEG1	8.2e-19	43.60	Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1	[more]
Q2QQ32	1.4e-10	76.92	Transcription factor BHLH133 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH133...	[more]

BLAST of CmoCh16G003420.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5L2	1.5e-156	93.13	transcription factor bHLH84-like OS=Cucurbita moschata OX=3662 GN=LOC111430802 P...	[more]
A0A6J1JBN3	7.4e-148	89.38	transcription factor bHLH85-like OS=Cucurbita maxima OX=3661 GN=LOC111482989 PE=...	[more]
A0A6J1D5B1	6.6e-96	62.26	transcription factor bHLH84-like OS=Momordica charantia OX=3673 GN=LOC111017743 ...	[more]
A0A0A0KT10	1.1e-95	66.28	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G000890 PE=4 S...	[more]
A0A5D3E098	2.8e-94	65.42	Transcription factor bHLH84-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of CmoCh16G003420.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922981.1	3.1e-156	93.13	transcription factor bHLH84-like [Cucurbita moschata]	[more]
KAG6576921.1	4.5e-155	92.81	Transcription factor basic helix-loop-helix 84, partial [Cucurbita argyrosperma ...	[more]
XP_023553185.1	1.8e-148	90.03	transcription factor bHLH84-like [Cucurbita pepo subsp. pepo]	[more]
XP_022984818.1	1.5e-147	89.38	transcription factor bHLH85-like [Cucurbita maxima]	[more]
KAG7014946.1	1.2e-144	84.30	Transcription factor bHLH85, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]

BLAST of CmoCh16G003420.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14760.1	1.1e-26	36.39	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G33880.1	2.4e-26	34.26	ROOT HAIR DEFECTIVE 6-LIKE 2	[more]
AT2G14760.3	3.5e-25	35.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G43175.1	1.2e-20	45.45	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G27740.1	5.8e-20	43.60	root hair defective 6-like 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..149
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 242..295
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 5..242
None	No IPR available	PANTHER	PTHR16223:SF232	TRANSCRIPTION FACTOR BHLH84-LIKE	coord: 242..295
None	No IPR available	PANTHER	PTHR16223:SF232	TRANSCRIPTION FACTOR BHLH84-LIKE	coord: 5..242

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh16G003420	CmoCh16G003420	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh16G003420.1:exon:8625	CmoCh16G003420.1:exon:8625	exon
CmoCh16G003420.1:exon:8626	CmoCh16G003420.1:exon:8626	exon
CmoCh16G003420.1:exon:8627	CmoCh16G003420.1:exon:8627	exon
CmoCh16G003420.1:exon:8628	CmoCh16G003420.1:exon:8628	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh16G003420.1:cds	CmoCh16G003420.1:cds_4	CDS
CmoCh16G003420.1:cds	CmoCh16G003420.1:cds_3	CDS
CmoCh16G003420.1:cds	CmoCh16G003420.1:cds_2	CDS
CmoCh16G003420.1:cds	CmoCh16G003420.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh16G003420.1	CmoCh16G003420.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding