CmoCh14G006490.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G006490.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr14: 3271849 .. 3272838 (+)
Sequence length	990
RNA-Seq Expression	CmoCh14G006490.1
Synteny	CmoCh14G006490.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAACCACCAAATTCTGGCGAAATCCAAACTGGGCTTCTCTGCTTCATTCAGAGAAGCCTTCAAAATCCTCTTTAATCATCCAAAGTTCATCTCCCTCGTCCTCATCTCCTCCTTCCCCCTCTTCGCCTCCCTCCTCGCCCACCACATTCTCCTTCACCCAACCTTCATTCAACTCCTCAAACTTCTCTCAGAAGAAAATCCATTTGATCCATCTCCAAGGTACATCATCAGGTGTCGATTAGATGGCAGCACAGCCTGCATCTCGCAGCGCTCCTCTGATGACAACAACTTCAAAGCAACTCTCTCCCACAAGTTTCTGATATCAACTCTCATCTCTTCAGCACTCATCTTCTTCCTAGACCTTCTCTCCACAATCTCAACAGTATCTATATCAGCAGCAATATATGGAGGAAACTCCCCAATGGGTTTCAAACAGATGCTAGTTGAAGTCAGAAAGCTAGTGGCTCTAAGACTGAGAGGCTCATTGGCAACATCTCTGTATGCTCTTTTATTTGCTTCACTAACTCTATTGGGTTTAATCGCTTTGTCAACAAACATGTTTTTGATGCCAAAAAGCTCATTTATCTTTGGGACAATCTTTGTGTTTCTGTTGACAAAATTCATAGAGTGGAGTGCTATTTGGAACATGGGAATTGTTATCTCAATCTTGGATAAGAACCATGGCTACATAGCAATTGGAGTGGCTGCATATCTAAGCAGAGGCAGCAGGAAGTTAGGGCTAAGTTTGATGCTGGCTTTCTTTGCTTTGAAGGTGGCTCTTGGGCTGCCATGTCTCTATGCTTTGTGGAATCAGGGGAGTTGTGGGGCATTGGGGAATGTGGTGTCTGTGAGTTTCAAGTGTGTGGGGGATATTCTAATGTGGATTGTTCTTATGGTTTATTTCTATGACTGTAAGAGGCAGTTTCTGGAGAAGAAGATCGATTTGGAGAATAATGGTAAAGCCATTGAAGCTACTCAACAATAA

mRNA sequence

ATGGAAAACCACCAAATTCTGGCGAAATCCAAACTGGGCTTCTCTGCTTCATTCAGAGAAGCCTTCAAAATCCTCTTTAATCATCCAAAGTTCATCTCCCTCGTCCTCATCTCCTCCTTCCCCCTCTTCGCCTCCCTCCTCGCCCACCACATTCTCCTTCACCCAACCTTCATTCAACTCCTCAAACTTCTCTCAGAAGAAAATCCATTTGATCCATCTCCAAGGTACATCATCAGGTGTCGATTAGATGGCAGCACAGCCTGCATCTCGCAGCGCTCCTCTGATGACAACAACTTCAAAGCAACTCTCTCCCACAAGTTTCTGATATCAACTCTCATCTCTTCAGCACTCATCTTCTTCCTAGACCTTCTCTCCACAATCTCAACAGTATCTATATCAGCAGCAATATATGGAGGAAACTCCCCAATGGGTTTCAAACAGATGCTAGTTGAAGTCAGAAAGCTAGTGGCTCTAAGACTGAGAGGCTCATTGGCAACATCTCTGTATGCTCTTTTATTTGCTTCACTAACTCTATTGGGTTTAATCGCTTTGTCAACAAACATGTTTTTGATGCCAAAAAGCTCATTTATCTTTGGGACAATCTTTGTGTTTCTGTTGACAAAATTCATAGAGTGGAGTGCTATTTGGAACATGGGAATTGTTATCTCAATCTTGGATAAGAACCATGGCTACATAGCAATTGGAGTGGCTGCATATCTAAGCAGAGGCAGCAGGAAGTTAGGGCTAAGTTTGATGCTGGCTTTCTTTGCTTTGAAGGTGGCTCTTGGGCTGCCATGTCTCTATGCTTTGTGGAATCAGGGGAGTTGTGGGGCATTGGGGAATGTGGTGTCTGTGAGTTTCAAGTGTGTGGGGGATATTCTAATGTGGATTGTTCTTATGGTTTATTTCTATGACTGTAAGAGGCAGTTTCTGGAGAAGAAGATCGATTTGGAGAATAATGGTAAAGCCATTGAAGCTACTCAACAATAA

Coding sequence (CDS)

ATGGAAAACCACCAAATTCTGGCGAAATCCAAACTGGGCTTCTCTGCTTCATTCAGAGAAGCCTTCAAAATCCTCTTTAATCATCCAAAGTTCATCTCCCTCGTCCTCATCTCCTCCTTCCCCCTCTTCGCCTCCCTCCTCGCCCACCACATTCTCCTTCACCCAACCTTCATTCAACTCCTCAAACTTCTCTCAGAAGAAAATCCATTTGATCCATCTCCAAGGTACATCATCAGGTGTCGATTAGATGGCAGCACAGCCTGCATCTCGCAGCGCTCCTCTGATGACAACAACTTCAAAGCAACTCTCTCCCACAAGTTTCTGATATCAACTCTCATCTCTTCAGCACTCATCTTCTTCCTAGACCTTCTCTCCACAATCTCAACAGTATCTATATCAGCAGCAATATATGGAGGAAACTCCCCAATGGGTTTCAAACAGATGCTAGTTGAAGTCAGAAAGCTAGTGGCTCTAAGACTGAGAGGCTCATTGGCAACATCTCTGTATGCTCTTTTATTTGCTTCACTAACTCTATTGGGTTTAATCGCTTTGTCAACAAACATGTTTTTGATGCCAAAAAGCTCATTTATCTTTGGGACAATCTTTGTGTTTCTGTTGACAAAATTCATAGAGTGGAGTGCTATTTGGAACATGGGAATTGTTATCTCAATCTTGGATAAGAACCATGGCTACATAGCAATTGGAGTGGCTGCATATCTAAGCAGAGGCAGCAGGAAGTTAGGGCTAAGTTTGATGCTGGCTTTCTTTGCTTTGAAGGTGGCTCTTGGGCTGCCATGTCTCTATGCTTTGTGGAATCAGGGGAGTTGTGGGGCATTGGGGAATGTGGTGTCTGTGAGTTTCAAGTGTGTGGGGGATATTCTAATGTGGATTGTTCTTATGGTTTATTTCTATGACTGTAAGAGGCAGTTTCTGGAGAAGAAGATCGATTTGGAGAATAATGGTAAAGCCATTGAAGCTACTCAACAATAA

Protein sequence

MENHQILAKSKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQLLKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFFLDLLSTISTVSISAAIYGGNSPMGFKQMLVEVRKLVALRLRGSLATSLYALLFASLTLLGLIALSTNMFLMPKSSFIFGTIFVFLLTKFIEWSAIWNMGIVISILDKNHGYIAIGVAAYLSRGSRKLGLSLMLAFFALKVALGLPCLYALWNQGSCGALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKAIEATQQ

Homology

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BLAST of CmoCh14G006490.1 vs. ExPASy TrEMBL
Match: A0A6J1F4Z1 (uncharacterized protein LOC111442387 OS=Cucurbita moschata OX=3662 GN=LOC111442387 PE=4 SV=1)

HSP 1 Score: 620.5 bits (1599), Expect = 3.9e-174
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0


Query: 1   MENHQILAKSKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60
           MENHQILAKSKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL
Sbjct: 1   MENHQILAKSKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60

Query: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120
           LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF
Sbjct: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120

Query: 121 LDLLSTISTVSISAAIYGGNSPMGFKQMLVEVRKLVALRLRGSLATSLYALLFASLTLLG 180
           LDLLSTISTVSISAAIYGGNSPMGFKQMLVEVRKLVALRLRGSLATSLYALLFASLTLLG
Sbjct: 121 LDLLSTISTVSISAAIYGGNSPMGFKQMLVEVRKLVALRLRGSLATSLYALLFASLTLLG 180

Query: 181 LIALSTNMFLMPKSSFIFGTIFVFLLTKFIEWSAIWNMGIVISILDKNHGYIAIGVAAYL 240
           LIALSTNMFLMPKSSFIFGTIFVFLLTKFIEWSAIWNMGIVISILDKNHGYIAIGVAAYL
Sbjct: 181 LIALSTNMFLMPKSSFIFGTIFVFLLTKFIEWSAIWNMGIVISILDKNHGYIAIGVAAYL 240

Query: 241 SRGSRKLGLSLMLAFFALKVALGLPCLYALWNQGSCGALGNVVSVSFKCVGDILMWIVLM 300
           SRGSRKLGLSLMLAFFALKVALGLPCLYALWNQGSCGALGNVVSVSFKCVGDILMWIVLM
Sbjct: 241 SRGSRKLGLSLMLAFFALKVALGLPCLYALWNQGSCGALGNVVSVSFKCVGDILMWIVLM 300

Query: 301 VYFYDCKRQFLEKKIDLENNGKAIEATQQ 330
           VYFYDCKRQFLEKKIDLENNGKAIEATQQ
Sbjct: 301 VYFYDCKRQFLEKKIDLENNGKAIEATQQ 329

[Close]

BLAST of CmoCh14G006490.1 vs. ExPASy TrEMBL
Match: A0A6J1J1I2 (uncharacterized protein LOC111481872 OS=Cucurbita maxima OX=3661 GN=LOC111481872 PE=4 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 5.7e-165
Identity = 314/329 (95.44%), Postives = 317/329 (96.35%), Query Frame = 0


Query: 1   MENHQILAKSKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60
           MENHQILAK KLGFSASFREAFKILFNHP FISLVLI SFPLFASLLAHHILLHPTFIQL
Sbjct: 1   MENHQILAKPKLGFSASFREAFKILFNHPNFISLVLIFSFPLFASLLAHHILLHPTFIQL 60

Query: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120
           LKLLSEENP DPSPRYIIRC+L GSTACISQRS DD+NFK TLSHKFLISTLISSALIFF
Sbjct: 61  LKLLSEENPVDPSPRYIIRCQLGGSTACISQRSPDDDNFKPTLSHKFLISTLISSALIFF 120

Query: 121 LDLLSTISTVSISAAIYGGNSPMGFKQMLVEVRKLVALRLRGSLATSLYALLFASLTLLG 180
           LDLLSTISTVSISAAIYGGNS MGFKQMLVEVRKLVALR RG+LATSLYALL ASLTLLG
Sbjct: 121 LDLLSTISTVSISAAIYGGNSQMGFKQMLVEVRKLVALRTRGALATSLYALLLASLTLLG 180

Query: 181 LIALSTNMFLMPKSSFIFGTIFVFLLTKFIEWSAIWNMGIVISILDKNHGYIAIGVAAYL 240
           LIALSTNMFLMPKSSFIFGTIF FLLTKFIEWSAIWNMGIVISILDKNHGYIAIGVAAYL
Sbjct: 181 LIALSTNMFLMPKSSFIFGTIFAFLLTKFIEWSAIWNMGIVISILDKNHGYIAIGVAAYL 240

Query: 241 SRGSRKLGLSLMLAFFALKVALGLPCLYALWNQGSCGALGNVVSVSFKCVGDILMWIVLM 300
           SRGSRKLGLSLML FFALKVALGLPCLYALWNQGSCGALGNVVSVSFKCVGDILMWIVLM
Sbjct: 241 SRGSRKLGLSLMLVFFALKVALGLPCLYALWNQGSCGALGNVVSVSFKCVGDILMWIVLM 300

Query: 301 VYFYDCKRQFLEKKIDLENNGKAIEATQQ 330
           VYFYDCKRQFLEKKIDLENNGKAIEATQQ
Sbjct: 301 VYFYDCKRQFLEKKIDLENNGKAIEATQQ 329

[Close]

BLAST of CmoCh14G006490.1 vs. ExPASy TrEMBL
Match: A0A0A0LG51 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G835840 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.4e-147
Identity = 276/329 (83.89%), Postives = 301/329 (91.49%), Query Frame = 0


Query: 1   MENHQILAKSKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60
           M++HQILAK KLGFSAS REAFKI F+ P FISLV++ SFP FASLLAHHILLHPTF+QL
Sbjct: 1   MDSHQILAKQKLGFSASLREAFKIFFHCPNFISLVIVFSFPFFASLLAHHILLHPTFVQL 60

Query: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120
           LKLLS+ENPFDPS RYIIRC+L  +  C+SQRSSD+ N K TLSH+FLISTL+SS LIFF
Sbjct: 61  LKLLSQENPFDPSQRYIIRCQLGDTRHCLSQRSSDNYNLKETLSHRFLISTLLSSVLIFF 120

Query: 121 LDLLSTISTVSISAAIYGGNSPMGFKQMLVEVRKLVALRLRGSLATSLYALLFASLTLLG 180
           LDLLSTISTVSISA+IY GNS MGFK+MLVEVRKL+A RLRG++ATSLY LL ASLTLLG
Sbjct: 121 LDLLSTISTVSISASIYAGNSQMGFKEMLVEVRKLLAARLRGTMATSLYVLLIASLTLLG 180

Query: 181 LIALSTNMFLMPKSSFIFGTIFVFLLTKFIEWSAIWNMGIVISILDKNHGYIAIGVAAYL 240
           L+ALSTNMFLMPKSSFIFGTIFV LL K+IEWSAIWNMGIVISILDKNHGYIAIGVAAYL
Sbjct: 181 LVALSTNMFLMPKSSFIFGTIFVILLAKYIEWSAIWNMGIVISILDKNHGYIAIGVAAYL 240

Query: 241 SRGSRKLGLSLMLAFFALKVALGLPCLYALWNQGSCGALGNVVSVSFKCVGDILMWIVLM 300
           SRGSRKLG SLML FFALKVA  LPCLYALWN+GSCGALGNVVSVSFKCVGDI+MW+VLM
Sbjct: 241 SRGSRKLGFSLMLVFFALKVAFALPCLYALWNEGSCGALGNVVSVSFKCVGDIVMWVVLM 300

Query: 301 VYFYDCKRQFLEKKIDLENNGKAIEATQQ 330
           VYFYDCKR+FLEKKIDLENNGKAI+A QQ
Sbjct: 301 VYFYDCKREFLEKKIDLENNGKAIKANQQ 329

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BLAST of CmoCh14G006490.1 vs. ExPASy TrEMBL
Match: A0A5D3CUB1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1119G00110 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 1.1e-144
Identity = 274/329 (83.28%), Postives = 299/329 (90.88%), Query Frame = 0


Query: 1   MENHQILAKSKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60
           M++HQILAK KLGFSA+ REAFKI F+ P FISLV+I S PLFASLLA+HILLHPTF+QL
Sbjct: 1   MDSHQILAKQKLGFSAALREAFKIFFHCPNFISLVIIFSLPLFASLLAYHILLHPTFVQL 60

Query: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120
           LKLLS+ENPFDPS  YIIRC+L  +T C SQRSSD+ NFK TLSH+FLISTL+SS LIFF
Sbjct: 61  LKLLSQENPFDPSQGYIIRCQLGDTTDCFSQRSSDNYNFKETLSHRFLISTLLSSVLIFF 120

Query: 121 LDLLSTISTVSISAAIYGGNSPMGFKQMLVEVRKLVALRLRGSLATSLYALLFASLTLLG 180
           LDLLSTISTV ISAA+YGGNS M FK+MLVEVRKL+A RL G++ATSLY LL ASLTLLG
Sbjct: 121 LDLLSTISTVFISAAMYGGNSQMDFKEMLVEVRKLLAARLSGTMATSLYVLLIASLTLLG 180

Query: 181 LIALSTNMFLMPKSSFIFGTIFVFLLTKFIEWSAIWNMGIVISILDKNHGYIAIGVAAYL 240
           L+ALSTNMFLMPKSSFIFG IFV LL K+IEWSAIWNMGIVISILDKNHGYIAIGVAAYL
Sbjct: 181 LVALSTNMFLMPKSSFIFGPIFVILLAKYIEWSAIWNMGIVISILDKNHGYIAIGVAAYL 240

Query: 241 SRGSRKLGLSLMLAFFALKVALGLPCLYALWNQGSCGALGNVVSVSFKCVGDILMWIVLM 300
           SR SRKLG SLML FFALKVA GLPCLYALW++GSCGALGNVVSVSFKCVGDI+MW+VLM
Sbjct: 241 SRDSRKLGFSLMLVFFALKVAFGLPCLYALWHEGSCGALGNVVSVSFKCVGDIVMWVVLM 300

Query: 301 VYFYDCKRQFLEKKIDLENNGKAIEATQQ 330
           VYFYDCKR+FLEKKIDLENNGKAIEATQQ
Sbjct: 301 VYFYDCKREFLEKKIDLENNGKAIEATQQ 329

[Close]

BLAST of CmoCh14G006490.1 vs. ExPASy TrEMBL
Match: A0A1S4DUQ5 (uncharacterized protein LOC103487071 OS=Cucumis melo OX=3656 GN=LOC103487071 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 1.1e-144
Identity = 274/329 (83.28%), Postives = 299/329 (90.88%), Query Frame = 0


Query: 1   MENHQILAKSKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQL 60
           M++HQILAK KLGFSA+ REAFKI F+ P FISLV+I S PLFASLLA+HILLHPTF+QL
Sbjct: 22  MDSHQILAKQKLGFSAALREAFKIFFHCPNFISLVIIFSLPLFASLLAYHILLHPTFVQL 81

Query: 61  LKLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF 120
           LKLLS+ENPFDPS  YIIRC+L  +T C SQRSSD+ NFK TLSH+FLISTL+SS LIFF
Sbjct: 82  LKLLSQENPFDPSQGYIIRCQLGDTTDCFSQRSSDNYNFKETLSHRFLISTLLSSVLIFF 141

Query: 121 LDLLSTISTVSISAAIYGGNSPMGFKQMLVEVRKLVALRLRGSLATSLYALLFASLTLLG 180
           LDLLSTISTV ISAA+YGGNS M FK+MLVEVRKL+A RL G++ATSLY LL ASLTLLG
Sbjct: 142 LDLLSTISTVFISAAMYGGNSQMDFKEMLVEVRKLLAARLSGTMATSLYVLLIASLTLLG 201

Query: 181 LIALSTNMFLMPKSSFIFGTIFVFLLTKFIEWSAIWNMGIVISILDKNHGYIAIGVAAYL 240
           L+ALSTNMFLMPKSSFIFG IFV LL K+IEWSAIWNMGIVISILDKNHGYIAIGVAAYL
Sbjct: 202 LVALSTNMFLMPKSSFIFGPIFVILLAKYIEWSAIWNMGIVISILDKNHGYIAIGVAAYL 261

Query: 241 SRGSRKLGLSLMLAFFALKVALGLPCLYALWNQGSCGALGNVVSVSFKCVGDILMWIVLM 300
           SR SRKLG SLML FFALKVA GLPCLYALW++GSCGALGNVVSVSFKCVGDI+MW+VLM
Sbjct: 262 SRDSRKLGFSLMLVFFALKVAFGLPCLYALWHEGSCGALGNVVSVSFKCVGDIVMWVVLM 321

Query: 301 VYFYDCKRQFLEKKIDLENNGKAIEATQQ 330
           VYFYDCKR+FLEKKIDLENNGKAIEATQQ
Sbjct: 322 VYFYDCKREFLEKKIDLENNGKAIEATQQ 350

[Close]

BLAST of CmoCh14G006490.1 vs. TAIR 10
Match: AT1G23830.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23840.1); Has 57 Blast hits to 52 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.5 bits (249), Expect = 2.6e-21
Identity = 95/359 (26.46%), Postives = 162/359 (45.13%), Query Frame = 0


Query: 8   AKSKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPT------FIQLL 67
           ++ KL      + A K+LF +   +  + + S PLF  L+   + L  T      F+  L
Sbjct: 5   SEEKLSVIELLKRALKLLFGNINLLLFLCLCSLPLFFFLIFFELSLQTTVYLTSQFLWKL 64

Query: 68  KLLSEENPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF- 127
            +L E+ P             +     IS++ +D            LIS LI + L++F 
Sbjct: 65  LILGEDLP-------------ENDLILISEKKND------------LISWLIQTFLLYFF 124

Query: 128 ----LDLLSTISTVSISAAIY-GGNSPMGFKQMLVEVRKLVALRLRGSLATSLYALLFAS 187
               LDLL+T + V+ S+ +Y     P+G   ++    K+   R+ G L TSLY LL+++
Sbjct: 125 PYTILDLLTTTTIVAASSIVYTSKEEPLGLLYLVERSIKICQNRVGGCLITSLYVLLWST 184

Query: 188 LTLL----------------------------GLIALSTNMF--LMPKSSFIFGTIFVFL 247
              L                            G     T +F  ++P +  +  T+F+ L
Sbjct: 185 SVFLFFFLFFFLQFLSGSTNYVSIPYLSREYKGFHYQPTGLFNVVVPLTLLMQCTLFIVL 244

Query: 248 LTKFIEWSAIWNMGIVISILDKN------HGYIAIGVAAYLSRGSRKLGLSLMLAFFALK 307
             K+ +WS+ WNMG+V+S+L+++      +G  A+ ++ +  +G  K  L LML F    
Sbjct: 245 TAKYSKWSSGWNMGLVVSVLEEDEDGQGIYGGDALSLSGWYRKGHEKRDLWLMLMFLVFG 304

Query: 308 VALGLPCLYALWNQGSCGALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLE 319
           +A  +PCLY+  +    G +     V   CVG++L W+  +  ++DCK   L KK D+E
Sbjct: 305 LATRMPCLYSKCSASGNGVMYTGFYVGLICVGNLLKWVTCLACYHDCKTMVLRKKRDVE 338

[Close]

BLAST of CmoCh14G006490.1 vs. TAIR 10
Match: AT1G23840.1 (unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23850.1); Has 53 Blast hits to 48 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 95.5 bits (236), Expect = 8.4e-20
Identity = 96/360 (26.67%), Postives = 155/360 (43.06%), Query Frame = 0


Query: 8   AKSKLGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQLLKLLSEE 67
           ++ KL      + A K+LF +      + + S PLF  L+   + L  T           
Sbjct: 5   SEEKLSVIELLKRALKLLFGNINLALFLFLCSLPLFCFLIFFELSLQTT----------- 64

Query: 68  NPFDPSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFF-----LD 127
                              +  S   S   N +  LS   L+  LI + L++F     LD
Sbjct: 65  ------------------VSLASTYISKLVNSEEDLSENDLLPWLIQTTLLYFFPYTILD 124

Query: 128 LLSTISTVSISAAIY-GGNSPMGFKQMLVEVRKLVALRLRGSLATSLYALLFASLTLLGL 187
           LL+T + V+ S+  Y     P+G   ++    KL   ++ G L TSLY LL ++   LGL
Sbjct: 125 LLTTTTIVAASSIAYTSEEEPLGLLYLVGRSFKLCQNKVGGCLITSLYVLLLSTSVFLGL 184

Query: 188 IALST----------------NMFLMPKSSF--------------IFGTIFVFLLTKFIE 247
            + ST                N  ++    F              I GT+F+ L  KF +
Sbjct: 185 FSGSTIYLYFASLTLEQQIFFNQAVVQDQRFLEQAVVLLDVVVVLIHGTVFIVLAAKFSK 244

Query: 248 WSAIWNMGIVISILDKN------HGYIAIGVAAYLSRGSRKLGLSLMLAFFALKVALGLP 307
           WSA WN+ +V+S+L++       +G  A+ ++A+  RG  K    +ML F    +   +P
Sbjct: 245 WSAGWNISMVVSVLEEEEDSKGIYGSSALSLSAWYLRGQEKRDFWMMLVFLVGALVTRMP 304

Query: 308 CLYALWNQ--GSCGALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGKA 324
           CLY   ++     G L   + VS  CVG+++ W+  +V+++DC  + L KK D+E   KA
Sbjct: 305 CLYYKCSESLSGNGVLYTGLYVSLICVGNVVKWVSCVVWYHDCNTRVLRKKGDVEIGSKA 335

[Close]

BLAST of CmoCh14G006490.1 vs. TAIR 10
Match: AT1G23850.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23840.1); Has 47 Blast hits to 40 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 93.6 bits (231), Expect = 3.2e-19
Identity = 96/359 (26.74%), Postives = 158/359 (44.01%), Query Frame = 0


Query: 12  LGFSASFREAFKILFNHPKFISLVLISSFPLFASLLAHHILLHPTFIQLLKLLSEENPFD 71
           LGF    + A K+L  +   +  + + S PLF  L+   + L  T    + L S+     
Sbjct: 7   LGFINILKRATKLLCGNINLVLFLFLCSLPLFCFLIFFELSLQTT----VSLASQ----- 66

Query: 72  PSPRYIIRCRLDGSTACISQRSSDDNNFKATLSHKFLISTLISSALIFFLDLLSTISTVS 131
               Y++R   +     + Q +S   N    L   FL+  L    LI   DL +T + VS
Sbjct: 67  ----YLVRQLTNWDYYYVPQDASVLENLIPLLIQTFLL-YLFPYGLI---DLFTTTTIVS 126

Query: 132 ISAAIY-GGNSPMGFKQMLVEVRKLVALRLRGSLATSLYALLFASLTLLGLIALSTNMFL 191
            S  ++     P+ F Q++    ++   RL G L TSLY LL ++    G + ++TN F 
Sbjct: 127 ASWTVHTSEEEPLRFGQLVRRTVEICQNRLEGCLITSLYVLLLSTPVFFGFLFVATNYFH 186

Query: 192 M------PKSSFIF---------------------------------GTIFVFLLTKFIE 251
           +       ++S+ +                                 G IF+ LL  F +
Sbjct: 187 IISLTGSGENSYYYSINIEEDAEGYYRSSSVNSPVKMLFDAVLAMFHGAIFLGLLAMFSK 246

Query: 252 WSAIWNMGIVISILDKN------HGYIAIGVAAYLSRGSRKLGLSLMLAFFALKVALGLP 311
           WSA WNMG+V+S+L++       +G  A+ +++   +G  K GL +ML F    +A+ +P
Sbjct: 247 WSAGWNMGLVVSVLEEEENGQSIYGTDALTLSSNYGKGHEKRGLQVMLVFLVFAIAMRMP 306

Query: 312 CLYALWNQGSCG--ALGNVVSVSFKCVGDILMWIVLMVYFYDCKRQFLEKKIDLENNGK 323
           C      + S G   L     V   CVG+++ W+  +V++ DC+   LEKK D+E   K
Sbjct: 307 CFCFKCTESSNGNRVLYTSFYVGLICVGNMIKWVACVVFYEDCRTSVLEKKGDVEIGSK 348

The following BLAST results are available for this feature:

BLAST of CmoCh14G006490.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh14G006490.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4Z1	3.9e-174	100.00	uncharacterized protein LOC111442387 OS=Cucurbita moschata OX=3662 GN=LOC1114423...	[more]
A0A6J1J1I2	5.7e-165	95.44	uncharacterized protein LOC111481872 OS=Cucurbita maxima OX=3661 GN=LOC111481872...	[more]
A0A0A0LG51	2.4e-147	83.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G835840 PE=4 SV=1	[more]
A0A5D3CUB1	1.1e-144	83.28	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4DUQ5	1.1e-144	83.28	uncharacterized protein LOC103487071 OS=Cucumis melo OX=3656 GN=LOC103487071 PE=...	[more]

BLAST of CmoCh14G006490.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23830.1	2.6e-21	26.46	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G23840.1	8.4e-20	26.67	unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structu...	[more]
AT1G23850.1	3.2e-19	26.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36714	T23E23.1	coord: 1..328
None	No IPR available	PANTHER	PTHR36714:SF1	T23E23.1	coord: 1..328

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh14G006490	CmoCh14G006490	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh14G006490.1:exon:3216	CmoCh14G006490.1:exon:3216	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh14G006490.1:cds	CmoCh14G006490.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh14G006490.1	CmoCh14G006490.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane