CmoCh14G004790.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G004790.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	MYB transcription factor
Location	Cmo_Chr14: 2369223 .. 2370465 (+)
Sequence length	1079
RNA-Seq Expression	CmoCh14G004790.1
Synteny	CmoCh14G004790.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAAGAAAAAAAAAAAAAGAAGAAGAACTTGCAGCCATAGCCATATCGAATTCAAAGAAAAAAAAACAAAGGTAAAAGGGTTGAGAAAGGCATGGGAAGGGTTCCTTGCTGTGATAAAGTGGGCATAAAGAAGGGGCCATGGACGCCGGAAGAAGATATCATTCTGGTCTCCTACATCCAAGAACACGGCCCCGGCAATTGGCGCTCCGTTCCCACCAACACAGGTATATGAAAATCCCTTTTGTTTATAATCCCTTCCCATTTACTTGATCTTATTGTTCTTGAGATTTTTGTTGTTGTTCTTAGGATTGTTGCGATGCAGCAAAAGTTGCAGGCTCCGGTGGACCAATTATCTCCGGCCGGGAATAAACAGAGGAAATTTCACTCCCCATGAGGAAGGAATGATCATTCATCTTCAAGCTTTATTGGGTAACAAGTAATGATCTTCTTATTGTTCTTTCTTCTTTTGATTTGCAGTTTCAATCATTTAATTGAAATCTGGGCTTTGAAATTCTCAGATGGGCGGCCATAGCTTCGTATCTTCCTCAGAGGACGGATAACAATATAAAGAATTATTGGAATACCCATTTGAAAAAGAAGCTTAAAAGATTGCAGTCCGCCGCCGTTGATCCGCCGGAGCCATCCGAGTCCGCCGGCGGTCAGTTTCAATCCCAGTGCTTGTCGCCGCCGCTCGCTGAAAACAGAGCATCCACCTACGCCTCAAGCGCCGAGAACATTTCGCGGCTTCTTCAAGGTTGGATGAGATCTTCACCGGAGGAATCTCGTCGGAGAATCGGCGGGGAGAATTCTGGCACCGCCGCGCAGGAACAGCCGAAGGAGGAATTGAACGGCGGCGAGTTGGTTTCCGGTGAAGAATTTGATTCGATTTTGTCGTTTGAGAATTGGAAGAATGTGAGTTCTTGTGAGGATAAAGAGGAACATGTTGGAGAGAAGCAAAGATTTGAAAACGCCGGCGCTACGGCGGTAGCTGCGACGGCGCCGCCACTATCGTTTCTTGAAAAGTGGCTGTTTGAAGAAGGCGCCACCGGGCAAGTGGAGGAGATGATGGAGTTGCCGCCGGTGTTCTAACAAAAACAAAACAAAAAAAAAGCCAAAAAAATTGTAGTTTTTATTTTTGTTTGTTTTCAATTGTAATAATCCAAAGAACAAGAAATTAATTACCCTTTTATCTCTTTCTGTGTGACAATAAATTTCACAACTTTATTTTTAAT

mRNA sequence

AAAAAAAAAAAAAAAGAAAAAAAAAAAAAGAAGAAGAACTTGCAGCCATAGCCATATCGAATTCAAAGAAAAAAAAACAAAGGTAAAAGGGTTGAGAAAGGCATGGGAAGGGTTCCTTGCTGTGATAAAGTGGGCATAAAGAAGGGGCCATGGACGCCGGAAGAAGATATCATTCTGGTCTCCTACATCCAAGAACACGGCCCCGGCAATTGGCGCTCCGTTCCCACCAACACAGGATTGTTGCGATGCAGCAAAAGTTGCAGGCTCCGGTGGACCAATTATCTCCGGCCGGGAATAAACAGAGGAAATTTCACTCCCCATGAGGAAGGAATGATCATTCATCTTCAAGCTTTATTGGGTAACAAATGGGCGGCCATAGCTTCGTATCTTCCTCAGAGGACGGATAACAATATAAAGAATTATTGGAATACCCATTTGAAAAAGAAGCTTAAAAGATTGCAGTCCGCCGCCGTTGATCCGCCGGAGCCATCCGAGTCCGCCGGCGGTCAGTTTCAATCCCAGTGCTTGTCGCCGCCGCTCGCTGAAAACAGAGCATCCACCTACGCCTCAAGCGCCGAGAACATTTCGCGGCTTCTTCAAGGTTGGATGAGATCTTCACCGGAGGAATCTCGTCGGAGAATCGGCGGGGAGAATTCTGGCACCGCCGCGCAGGAACAGCCGAAGGAGGAATTGAACGGCGGCGAGTTGGTTTCCGGTGAAGAATTTGATTCGATTTTGTCGTTTGAGAATTGGAAGAATGTGAGTTCTTGTGAGGATAAAGAGGAACATGTTGGAGAGAAGCAAAGATTTGAAAACGCCGGCGCTACGGCGGTAGCTGCGACGGCGCCGCCACTATCGTTTCTTGAAAAGTGGCTGTTTGAAGAAGGCGCCACCGGGCAAGTGGAGGAGATGATGGAGTTGCCGCCGGTGTTCTAACAAAAACAAAACAAAAAAAAAGCCAAAAAAATTGTAGTTTTTATTTTTGTTTGTTTTCAATTGTAATAATCCAAAGAACAAGAAATTAATTACCCTTTTATCTCTTTCTGTGTGACAATAAATTTCACAACTTTATTTTTAAT

Coding sequence (CDS)

ATGGGAAGGGTTCCTTGCTGTGATAAAGTGGGCATAAAGAAGGGGCCATGGACGCCGGAAGAAGATATCATTCTGGTCTCCTACATCCAAGAACACGGCCCCGGCAATTGGCGCTCCGTTCCCACCAACACAGGATTGTTGCGATGCAGCAAAAGTTGCAGGCTCCGGTGGACCAATTATCTCCGGCCGGGAATAAACAGAGGAAATTTCACTCCCCATGAGGAAGGAATGATCATTCATCTTCAAGCTTTATTGGGTAACAAATGGGCGGCCATAGCTTCGTATCTTCCTCAGAGGACGGATAACAATATAAAGAATTATTGGAATACCCATTTGAAAAAGAAGCTTAAAAGATTGCAGTCCGCCGCCGTTGATCCGCCGGAGCCATCCGAGTCCGCCGGCGGTCAGTTTCAATCCCAGTGCTTGTCGCCGCCGCTCGCTGAAAACAGAGCATCCACCTACGCCTCAAGCGCCGAGAACATTTCGCGGCTTCTTCAAGGTTGGATGAGATCTTCACCGGAGGAATCTCGTCGGAGAATCGGCGGGGAGAATTCTGGCACCGCCGCGCAGGAACAGCCGAAGGAGGAATTGAACGGCGGCGAGTTGGTTTCCGGTGAAGAATTTGATTCGATTTTGTCGTTTGAGAATTGGAAGAATGTGAGTTCTTGTGAGGATAAAGAGGAACATGTTGGAGAGAAGCAAAGATTTGAAAACGCCGGCGCTACGGCGGTAGCTGCGACGGCGCCGCCACTATCGTTTCTTGAAAAGTGGCTGTTTGAAGAAGGCGCCACCGGGCAAGTGGAGGAGATGATGGAGTTGCCGCCGGTGTTCTAA

Protein sequence

MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQSAAVDPPEPSESAGGQFQSQCLSPPLAENRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNGGELVSGEEFDSILSFENWKNVSSCEDKEEHVGEKQRFENAGATAVAATAPPLSFLEKWLFEEGATGQVEEMMELPPVF

Homology

[Close]

BLAST of CmoCh14G004790.1 vs. ExPASy Swiss-Prot
Match: B3VTV7 (Transcription factor MYB60 OS=Vitis vinifera OX=29760 GN=MYB60 PE=2 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.8e-87
Identity = 180/327 (55.05%), Postives = 208/327 (63.61%), Query Frame = 0


Query: 1   MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60
           MGR PCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY
Sbjct: 1   MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60

Query: 61  LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ 120
           LRPGI RGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDN+IKNYWNTHLKKK+K+ Q
Sbjct: 61  LRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKIKKFQ 120

Query: 121 SAAVDPPEPSESA----------------------GGQFQ---SQCLSPPLAENRASTYA 180
           S A+ P   S+S                       G  F+       + P   +  STYA
Sbjct: 121 S-ALSPHMASDSTTSTCTNHQFVPRSYAGDDHHRRGSSFEVINGHSSAHPSLNSPISTYA 180

Query: 181 SSAENISRLLQGWMRSSPEESRRRI-------------GGENSGTAAQE-----QPKEEL 240
           SS ENISRLL+GWMRSSP+ ++ ++              G +   AA       +PK E 
Sbjct: 181 SSTENISRLLEGWMRSSPKATKEKLHQNSSLEEGSIDMTGNSMAVAAVTSVQCYRPKLEQ 240

Query: 241 NGGELVSGEEFDSILSFENWK-------NVSSCEDKEEHVGEKQRFENAGATAVAATAPP 278
            GGELV+ +EF+SIL +EN         + +   D  +H  E +   +          PP
Sbjct: 241 GGGELVANDEFESILEYENLNDDHHQTTDATIPSDDHDHDHEMKMDHDQ-----KKHNPP 300

[Close]

BLAST of CmoCh14G004790.1 vs. ExPASy Swiss-Prot
Match: Q8GYP5 (Transcription factor MYB60 OS=Arabidopsis thaliana OX=3702 GN=MYB60 PE=1 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 8.3e-82
Identity = 167/290 (57.59%), Postives = 197/290 (67.93%), Query Frame = 0


Query: 1   MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60
           MGR PCCDK+GIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY
Sbjct: 1   MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60

Query: 61  LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ 120
           LRPGI RGNFTPHEEGMIIHLQALLGNKWA+IASYLPQRTDN+IKNYWNTHLKKKL +  
Sbjct: 61  LRPGIKRGNFTPHEEGMIIHLQALLGNKWASIASYLPQRTDNDIKNYWNTHLKKKLNK-- 120

Query: 121 SAAVDPPEPSESAGGQFQSQCLSPPLAENRASTYASSAENISRLLQGWMRSSPEESRRRI 180
               D  E S S     Q+      +  N  STYASS ENISRLL+GWMR+SP+ S    
Sbjct: 121 ---SDSDERSRSENIALQTSSTRNTI--NHRSTYASSTENISRLLEGWMRASPKSSTSTT 180

Query: 181 GGENS---------GTAAQEQPKEELNG------GELVSGEEFDSILSFENWKNVSSCED 240
             E+             + + P E+L G       + ++G++   I + EN    ++ +D
Sbjct: 181 FLEHKMQNRTNNFIDHHSDQFPYEQLQGSWEEGHSKGINGDDDQGIKNSEN----NNGDD 240

Query: 241 KEEHVGEKQRFENAGATAVAATAPPLSFLEKWLFEEGAT--GQVEEMMEL 274
                G+ +  ++  AT      PPL+F+EKWL EE +T  GQ+EEM  L
Sbjct: 241 VHHEDGDHEDDDDHNAT------PPLTFIEKWLLEETSTTGGQMEEMSHL 273

[Close]

BLAST of CmoCh14G004790.1 vs. ExPASy Swiss-Prot
Match: P81392 (Myb-related protein 306 OS=Antirrhinum majus OX=4151 GN=MYB306 PE=2 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 2.1e-69
Identity = 153/311 (49.20%), Postives = 184/311 (59.16%), Query Frame = 0


Query: 1   MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60
           MGR PCCDK+G+KKGPWTPEEDIILVSYIQEHGPGNWR++P+NTGLLRCSKSCRLRWTNY
Sbjct: 1   MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAIPSNTGLLRCSKSCRLRWTNY 60

Query: 61  LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ 120
           LRPGI RG+FT HEE MIIHLQALLGN+WAAIASYLP RTDN+IKNYWNTHLKKKL++LQ
Sbjct: 61  LRPGIKRGDFTEHEEKMIIHLQALLGNRWAAIASYLPHRTDNDIKNYWNTHLKKKLEKLQ 120

Query: 121 SAAVDPPEPSES--------AGGQFQ----------SQCLSPPLAENR------------ 180
           S      +   S        + GQ++           Q L   L+ ++            
Sbjct: 121 SPENGKCQDGNSSVDSDKSVSKGQWERRLQTDIHMAKQALCDALSLDKTSSSTDDPKLST 180

Query: 181 ----------ASTYASSAENISRLLQGWMRSSP--EESRRRIGGENSGTAAQEQPKEELN 240
                     ASTY SSAENI+RLL+ W + SP    S  + G   S T +   P   L+
Sbjct: 181 VQTTQPRPFQASTY-SSAENIARLLENWKKKSPVNASSTSQAGSSESTTTSFNYPSVCLS 240

Query: 241 GGELVSGEEFDSILSFENWKNVSSCEDKEEHVGEKQRFENAGATAVAATAP------PLS 264
                 G    + +SF    N S+ +  E+H   K      G      + P      PLS
Sbjct: 241 TSSPSEGAISTNFISF----NSSNSDILEDHDQAKFEAATNGVNFQDESKPILDNQMPLS 300

[Close]

BLAST of CmoCh14G004790.1 vs. ExPASy Swiss-Prot
Match: Q9SCU7 (Transcription factor MYB30 OS=Arabidopsis thaliana OX=3702 GN=MYB30 PE=1 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.9e-66
Identity = 148/329 (44.98%), Postives = 187/329 (56.84%), Query Frame = 0


Query: 1   MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60
           M R PCCDK G+KKGPWTPEEDIILV+YIQEHGPGNWR+VPTNTGLLRCSKSCRLRWTNY
Sbjct: 1   MVRPPCCDKGGVKKGPWTPEEDIILVTYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 60

Query: 61  LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKR-- 120
           LRPGI RGNFT HEE MI+HLQALLGN+WAAIASYLPQRTDN+IKNYWNTHLKKKL +  
Sbjct: 61  LRPGIKRGNFTEHEEKMIVHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLNKVN 120

Query: 121 ------LQSAAVDPPEPSESAG-------GQFQ--------------SQCLSPPLA---- 180
                 L  +++     S SA        GQ++              S+ LSP +A    
Sbjct: 121 QDSHQELDRSSLSSSPSSSSANSNSNISRGQWERRLQTDIHLAKKALSEALSPAVAPIIT 180

Query: 181 -------------------------ENRASTYASSAENISRLLQGWMRSSPEESRRRIGG 240
                                    +  ++TYASS ENI++LL+GW+++SP+   +    
Sbjct: 181 STVTTTSSSAESRRSTSSASGFLRTQETSTTYASSTENIAKLLKGWVKNSPK--TQNSAD 240

Query: 241 ENSGTAAQEQPKEELNGGELVSGEEFDSILSFENWKNVSSCEDKEEHVGEKQRFENAGAT 272
           + + T  +E  K + +G E      F S   F++    +      E             T
Sbjct: 241 QIASTEVKEVIKSD-DGKECAGA--FQSFSEFDHSYQQAGVSPDHE--------TKPDIT 300

[Close]

BLAST of CmoCh14G004790.1 vs. ExPASy Swiss-Prot
Match: Q9SN78 (Transcription factor MYB94 OS=Arabidopsis thaliana OX=3702 GN=MYB94 PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.6e-64
Identity = 149/341 (43.70%), Postives = 183/341 (53.67%), Query Frame = 0


Query: 1   MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60
           MGR PCCDK+G+KKGPWTPEEDIILVSYIQEHGPGNWRSVPT+TGL RCSKSCRLRWTNY
Sbjct: 1   MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRSVPTHTGLRRCSKSCRLRWTNY 60

Query: 61  LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ 120
           LRPGI RGNFT HEE MI+HLQALLGN+WAAIASYLP+RTDN+IKNYWNTHLKKKLK++ 
Sbjct: 61  LRPGIKRGNFTEHEEKMILHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKKKLKKMN 120

Query: 121 SAA-------------------VDPPEPSESAGGQFQ----------SQCLSPPLAENR- 180
            +                        + S S+ GQ++           Q L   L+ ++ 
Sbjct: 121 DSCDSTINNGLDNKDFSISNKNTTSHQSSNSSKGQWERRLQTDINMAKQALCDALSIDKP 180

Query: 181 ------------------------------------ASTYASSAENISRLLQGWMRSSPE 240
                                               +  YASSAENI+RLLQ +M+ +P+
Sbjct: 181 QNPTNFSIPDLGYGPSSSSSSTTTTTTTTRNTNPYPSGVYASSAENIARLLQNFMKDTPK 240

Query: 241 ES--RRRIGGENSGTAAQEQPKEELNGGELVSGEEFDSILSFENWKNVSSCEDKEEHVGE 274
            S        E + T A   P      GE +      S+ SF    ++   E+K + +  
Sbjct: 241 TSVPLPVAATEMAITTAASSPSTTEGDGEGID----HSLFSF---NSIDEAEEKPKLIDH 300

[Close]

BLAST of CmoCh14G004790.1 vs. ExPASy TrEMBL
Match: A0A6J1F299 (myb-related protein 306-like OS=Cucurbita moschata OX=3662 GN=LOC111441492 PE=4 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 4.6e-160
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60
           MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY
Sbjct: 1   MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60

Query: 61  LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ 120
           LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ
Sbjct: 61  LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ 120

Query: 121 SAAVDPPEPSESAGGQFQSQCLSPPLAENRASTYASSAENISRLLQGWMRSSPEESRRRI 180
           SAAVDPPEPSESAGGQFQSQCLSPPLAENRASTYASSAENISRLLQGWMRSSPEESRRRI
Sbjct: 121 SAAVDPPEPSESAGGQFQSQCLSPPLAENRASTYASSAENISRLLQGWMRSSPEESRRRI 180

Query: 181 GGENSGTAAQEQPKEELNGGELVSGEEFDSILSFENWKNVSSCEDKEEHVGEKQRFENAG 240
           GGENSGTAAQEQPKEELNGGELVSGEEFDSILSFENWKNVSSCEDKEEHVGEKQRFENAG
Sbjct: 181 GGENSGTAAQEQPKEELNGGELVSGEEFDSILSFENWKNVSSCEDKEEHVGEKQRFENAG 240

Query: 241 ATAVAATAPPLSFLEKWLFEEGATGQVEEMMELPPVF 278
           ATAVAATAPPLSFLEKWLFEEGATGQVEEMMELPPVF
Sbjct: 241 ATAVAATAPPLSFLEKWLFEEGATGQVEEMMELPPVF 277

[Close]

BLAST of CmoCh14G004790.1 vs. ExPASy TrEMBL
Match: A0A6J1J977 (myb-related protein 306-like OS=Cucurbita maxima OX=3661 GN=LOC111482431 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 9.0e-148
Identity = 258/277 (93.14%), Postives = 263/277 (94.95%), Query Frame = 0


Query: 1   MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60
           MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY
Sbjct: 1   MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60

Query: 61  LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ 120
           LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ
Sbjct: 61  LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ 120

Query: 121 SAAVDPPEPSESAGGQFQSQCLSPPLAENRASTYASSAENISRLLQGWMRSSPEESRRRI 180
           SAAVD PEPSESA   F SQCL   LA NRA+TYASSA+NISRLLQGWMRSSPEESR+ I
Sbjct: 121 SAAVDSPEPSESAASHFHSQCLPSQLAGNRATTYASSAQNISRLLQGWMRSSPEESRQGI 180

Query: 181 GGENSGTAAQEQPKEELNGGELVSGEEFDSILSFENWKNVSSCEDKEEHVGEKQRFENAG 240
           GGENSGTA Q+Q KEELNGGELVSGEEFDSILSFENWK VSSCEDKEEHVGE+QRFEN G
Sbjct: 181 GGENSGTAVQQQLKEELNGGELVSGEEFDSILSFENWKKVSSCEDKEEHVGEEQRFENVG 240

Query: 241 ATAVAATAPPLSFLEKWLFEEGATGQVEEMMELPPVF 278
           ATAVAATAPPLSFLEKWLFEEGATGQVEEMMELPPVF
Sbjct: 241 ATAVAATAPPLSFLEKWLFEEGATGQVEEMMELPPVF 277

[Close]

BLAST of CmoCh14G004790.1 vs. ExPASy TrEMBL
Match: A0A6J1FN82 (myb-related protein 306-like OS=Cucurbita moschata OX=3662 GN=LOC111445454 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 6.7e-127
Identity = 234/286 (81.82%), Postives = 251/286 (87.76%), Query Frame = 0


Query: 1   MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60
           MGR PCC+KVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY
Sbjct: 1   MGRPPCCEKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60

Query: 61  LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ 120
           LRPGI RGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDN+IKNYWNTHLKKKLK+LQ
Sbjct: 61  LRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQ 120

Query: 121 SAAVDPPEPSESAGGQFQSQCLSPPLAE-NRASTYASSAENISRLLQGWMRSSPEESRRR 180
           SAAVD PEPSES   QFQ++  +  LA  N+ASTYASSAENISRLLQGWMRSSPEESRR+
Sbjct: 121 SAAVDLPEPSESGSCQFQTKSFNDKLAAGNKASTYASSAENISRLLQGWMRSSPEESRRK 180

Query: 181 IGGENSGTAAQEQPKEELNGGELVSGEEFDSILSFENWKNV-------SSCEDKEEHVGE 240
           IGGENS   A++Q K E +GGELVSGEEFDS+LSFEN KNV       +SC+D+EE+VGE
Sbjct: 181 IGGENSTATARQQLKFEADGGELVSGEEFDSMLSFENLKNVNSWGKSTTSCKDEEENVGE 240

Query: 241 KQRFENAGATAVAAT-APPLSFLEKWLFEEGATGQVEEMMELPPVF 278
           K R E A +TAVAA   PPLSFLEKWLFEEGA GQVEEMMEL PVF
Sbjct: 241 KLRSETAASTAVAAAPPPPLSFLEKWLFEEGAAGQVEEMMELSPVF 286

[Close]

BLAST of CmoCh14G004790.1 vs. ExPASy TrEMBL
Match: A0A6J1I7Y7 (myb-related protein 306-like OS=Cucurbita maxima OX=3661 GN=LOC111470014 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.3e-126
Identity = 233/286 (81.47%), Postives = 250/286 (87.41%), Query Frame = 0


Query: 1   MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60
           MGR PCC+KVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY
Sbjct: 1   MGRPPCCEKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60

Query: 61  LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ 120
           LRPGI RGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDN+IKNYWNTHLKKKLK+LQ
Sbjct: 61  LRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQ 120

Query: 121 SAAVDPPEPSESAGGQFQSQCLSPPLAE-NRASTYASSAENISRLLQGWMRSSPEESRRR 180
           SAAVD PEPSES   QFQ++  +  LA  N+ASTYASSAENISRLLQGWMRSSPEESR +
Sbjct: 121 SAAVDLPEPSESGSCQFQTKSFNDKLAAGNKASTYASSAENISRLLQGWMRSSPEESRPK 180

Query: 181 IGGENSGTAAQEQPKEELNGGELVSGEEFDSILSFENWKNV-------SSCEDKEEHVGE 240
           IGGENS   A++Q K E +GGELVSGEEFDS+LSFEN KNV       +SC+D+EE+VGE
Sbjct: 181 IGGENSTATARQQLKVEADGGELVSGEEFDSMLSFENLKNVNSWGKSTTSCKDEEENVGE 240

Query: 241 KQRFENAGATAVAAT-APPLSFLEKWLFEEGATGQVEEMMELPPVF 278
           K R E A +TAVAA   PPLSFLEKWLFEEGA GQVEEMMEL PVF
Sbjct: 241 KLRSETAASTAVAAAPPPPLSFLEKWLFEEGAAGQVEEMMELSPVF 286

[Close]

BLAST of CmoCh14G004790.1 vs. ExPASy TrEMBL
Match: A0A6J1DEU8 (myb-related protein 306-like OS=Momordica charantia OX=3673 GN=LOC111019849 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.9e-122
Identity = 231/298 (77.52%), Postives = 245/298 (82.21%), Query Frame = 0


Query: 1   MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60
           MGR PCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY
Sbjct: 1   MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60

Query: 61  LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ 120
           LRPGI RGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDN+IKNYWNTHLKKKLK+LQ
Sbjct: 61  LRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQ 120

Query: 121 SAAVDPPEPSESAGG--QFQSQCLS----------------PPLAENRASTYASSAENIS 180
           SAAVDPPEPSES GG    +++C                  P LA NR +TYASSAENIS
Sbjct: 121 SAAVDPPEPSESGGGSCHLETKCFDDKRGAAAVAVGGSPEPPSLAGNRGATYASSAENIS 180

Query: 181 RLLQGWMRSSPEESRRRI--GGENSGT-AAQEQPKEELNGGELVSGEEFDSILSFENWKN 240
           RLLQGWMR+S  ESRR+I  GGENS   AA +QPK E +GGEL+SGEEFDSILSFEN KN
Sbjct: 181 RLLQGWMRTSAVESRRKIGPGGENSAAGAATQQPKTEPDGGELISGEEFDSILSFENLKN 240

Query: 241 VSSCEDKEEHVGEKQRFENAGATAVAATAPPLSFLEKWLFEEGATGQVEEMMELPPVF 278
           V+S     E+VGEKQR E+  A A  A APPLSFLEKWLFEEGA GQVEEMMEL PVF
Sbjct: 241 VNSWGKSPENVGEKQRSES--AAAATAVAPPLSFLEKWLFEEGAAGQVEEMMELSPVF 296

[Close]

BLAST of CmoCh14G004790.1 vs. TAIR 10
Match: AT1G08810.1 (myb domain protein 60 )

HSP 1 Score: 305.1 bits (780), Expect = 5.9e-83
Identity = 167/290 (57.59%), Postives = 197/290 (67.93%), Query Frame = 0


Query: 1   MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60
           MGR PCCDK+GIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY
Sbjct: 1   MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60

Query: 61  LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ 120
           LRPGI RGNFTPHEEGMIIHLQALLGNKWA+IASYLPQRTDN+IKNYWNTHLKKKL +  
Sbjct: 61  LRPGIKRGNFTPHEEGMIIHLQALLGNKWASIASYLPQRTDNDIKNYWNTHLKKKLNK-- 120

Query: 121 SAAVDPPEPSESAGGQFQSQCLSPPLAENRASTYASSAENISRLLQGWMRSSPEESRRRI 180
               D  E S S     Q+      +  N  STYASS ENISRLL+GWMR+SP+ S    
Sbjct: 121 ---SDSDERSRSENIALQTSSTRNTI--NHRSTYASSTENISRLLEGWMRASPKSSTSTT 180

Query: 181 GGENS---------GTAAQEQPKEELNG------GELVSGEEFDSILSFENWKNVSSCED 240
             E+             + + P E+L G       + ++G++   I + EN    ++ +D
Sbjct: 181 FLEHKMQNRTNNFIDHHSDQFPYEQLQGSWEEGHSKGINGDDDQGIKNSEN----NNGDD 240

Query: 241 KEEHVGEKQRFENAGATAVAATAPPLSFLEKWLFEEGAT--GQVEEMMEL 274
                G+ +  ++  AT      PPL+F+EKWL EE +T  GQ+EEM  L
Sbjct: 241 VHHEDGDHEDDDDHNAT------PPLTFIEKWLLEETSTTGGQMEEMSHL 273

[Close]

BLAST of CmoCh14G004790.1 vs. TAIR 10
Match: AT3G28910.1 (myb domain protein 30 )

HSP 1 Score: 252.7 bits (644), Expect = 3.5e-67
Identity = 148/329 (44.98%), Postives = 187/329 (56.84%), Query Frame = 0


Query: 1   MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60
           M R PCCDK G+KKGPWTPEEDIILV+YIQEHGPGNWR+VPTNTGLLRCSKSCRLRWTNY
Sbjct: 1   MVRPPCCDKGGVKKGPWTPEEDIILVTYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 60

Query: 61  LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKR-- 120
           LRPGI RGNFT HEE MI+HLQALLGN+WAAIASYLPQRTDN+IKNYWNTHLKKKL +  
Sbjct: 61  LRPGIKRGNFTEHEEKMIVHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLNKVN 120

Query: 121 ------LQSAAVDPPEPSESAG-------GQFQ--------------SQCLSPPLA---- 180
                 L  +++     S SA        GQ++              S+ LSP +A    
Sbjct: 121 QDSHQELDRSSLSSSPSSSSANSNSNISRGQWERRLQTDIHLAKKALSEALSPAVAPIIT 180

Query: 181 -------------------------ENRASTYASSAENISRLLQGWMRSSPEESRRRIGG 240
                                    +  ++TYASS ENI++LL+GW+++SP+   +    
Sbjct: 181 STVTTTSSSAESRRSTSSASGFLRTQETSTTYASSTENIAKLLKGWVKNSPK--TQNSAD 240

Query: 241 ENSGTAAQEQPKEELNGGELVSGEEFDSILSFENWKNVSSCEDKEEHVGEKQRFENAGAT 272
           + + T  +E  K + +G E      F S   F++    +      E             T
Sbjct: 241 QIASTEVKEVIKSD-DGKECAGA--FQSFSEFDHSYQQAGVSPDHE--------TKPDIT 300

[Close]

BLAST of CmoCh14G004790.1 vs. TAIR 10
Match: AT3G47600.1 (myb domain protein 94 )

HSP 1 Score: 247.7 bits (631), Expect = 1.1e-65
Identity = 149/341 (43.70%), Postives = 183/341 (53.67%), Query Frame = 0


Query: 1   MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60
           MGR PCCDK+G+KKGPWTPEEDIILVSYIQEHGPGNWRSVPT+TGL RCSKSCRLRWTNY
Sbjct: 1   MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRSVPTHTGLRRCSKSCRLRWTNY 60

Query: 61  LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ 120
           LRPGI RGNFT HEE MI+HLQALLGN+WAAIASYLP+RTDN+IKNYWNTHLKKKLK++ 
Sbjct: 61  LRPGIKRGNFTEHEEKMILHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKKKLKKMN 120

Query: 121 SAA-------------------VDPPEPSESAGGQFQ----------SQCLSPPLAENR- 180
            +                        + S S+ GQ++           Q L   L+ ++ 
Sbjct: 121 DSCDSTINNGLDNKDFSISNKNTTSHQSSNSSKGQWERRLQTDINMAKQALCDALSIDKP 180

Query: 181 ------------------------------------ASTYASSAENISRLLQGWMRSSPE 240
                                               +  YASSAENI+RLLQ +M+ +P+
Sbjct: 181 QNPTNFSIPDLGYGPSSSSSSTTTTTTTTRNTNPYPSGVYASSAENIARLLQNFMKDTPK 240

Query: 241 ES--RRRIGGENSGTAAQEQPKEELNGGELVSGEEFDSILSFENWKNVSSCEDKEEHVGE 274
            S        E + T A   P      GE +      S+ SF    ++   E+K + +  
Sbjct: 241 TSVPLPVAATEMAITTAASSPSTTEGDGEGID----HSLFSF---NSIDEAEEKPKLIDH 300

[Close]

BLAST of CmoCh14G004790.1 vs. TAIR 10
Match: AT1G74650.1 (myb domain protein 31 )

HSP 1 Score: 246.9 bits (629), Expect = 1.9e-65
Identity = 146/332 (43.98%), Postives = 176/332 (53.01%), Query Frame = 0


Query: 1   MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60
           MGR PCC+K+ +KKGPWTPEEDIILVSYIQ+HGPGNWRSVP NTGLLRCSKSCRLRWTNY
Sbjct: 1   MGRPPCCEKIEVKKGPWTPEEDIILVSYIQQHGPGNWRSVPANTGLLRCSKSCRLRWTNY 60

Query: 61  LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRLQ 120
           LRPGI RGNFT  EE MIIHLQALLGN+WAAIASYLPQRTDN+IKNYWNTHLKKKL  ++
Sbjct: 61  LRPGIKRGNFTQPEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLVMMK 120

Query: 121 -----------SAAVDPPEPSESAGG---------------------------QFQSQCL 180
                      + A D    + +  G                            FQ+  L
Sbjct: 121 FQNGIINENKTNLATDISSCNNNNNGCNHNKRTTNKGQWEKKLQTDINMAKQALFQALSL 180

Query: 181 ------------SPPLAENRASTYASSAENISRLLQGWMRSSPEESRRRIGGENSGTAAQ 240
                       SP    +  +TYASS +NIS+LLQ W  SS  +        N  ++  
Sbjct: 181 DQPSSLIPPDPDSPKPHHHSTTTYASSTDNISKLLQNWTSSSSSKPNTSSVSNNRSSSPG 240

Query: 241 EQPKEELNGGELVSGEEFDSILSFENWKNVSSCEDKEEHVGEKQRFENAGATAVAATAPP 273
           E             G  FD    F +     S ++K   + E   F+      +   A P
Sbjct: 241 E-------------GGLFDHHSLFSSNSESGSVDEKLNLMSETSMFKGESKPDIDMEATP 300

[Close]

BLAST of CmoCh14G004790.1 vs. TAIR 10
Match: AT5G62470.2 (myb domain protein 96 )

HSP 1 Score: 236.9 bits (603), Expect = 2.0e-62
Identity = 143/339 (42.18%), Postives = 179/339 (52.80%), Query Frame = 0


Query: 1   MGRVPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60
           MGR PCC+K+G+KKGPWTPEEDIILVSYIQEHGPGNWRSVPT+TGL RCSKSCRLRWTNY
Sbjct: 1   MGRPPCCEKIGVKKGPWTPEEDIILVSYIQEHGPGNWRSVPTHTGLRRCSKSCRLRWTNY 60

Query: 61  LRPGINRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNNIKNYWNTHLKKKLKRL- 120
           LRPGI RGNFT HEE  I+HLQALLGN+WAAIASYLP+RTDN+IKNYWNTHLKKKLK++ 
Sbjct: 61  LRPGIKRGNFTEHEEKTIVHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKKKLKKIN 120

Query: 121 ---------------------------------------------QSAAVDPPEPSESAG 180
                                                        ++ ++D P  + S+ 
Sbjct: 121 ESGEEDNDGVSSSNTSSQKNHQSTNKGQWERRLQTDINMAKQALCEALSLDKPSSTLSSS 180

Query: 181 GQFQS-----------------QCLSPPLAENRAST--------------YASSAENISR 240
               +                 +C  P  + +  +T              YASSAENI+R
Sbjct: 181 SSLPTPVITQQNIRNFSSALLDRCYDPSSSSSSTTTTTTSNTTNPYPSGVYASSAENIAR 240

Query: 241 LLQGWMRSSPEESRRRIGGENSGTAAQEQPKEELNG-GELVSGEEFDSILSFENWKNVSS 262
           LLQ +M+ +P+          S T        E  G G   S   F+S+   +N    +S
Sbjct: 241 LLQDFMKDTPKALTLSSSSPVSETGPLTAAVSEEGGEGFEQSFFSFNSMDETQNLTQETS 300

The following BLAST results are available for this feature:

BLAST of CmoCh14G004790.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3VTV7	3.8e-87	55.05	Transcription factor MYB60 OS=Vitis vinifera OX=29760 GN=MYB60 PE=2 SV=1	[more]
Q8GYP5	8.3e-82	57.59	Transcription factor MYB60 OS=Arabidopsis thaliana OX=3702 GN=MYB60 PE=1 SV=1	[more]
P81392	2.1e-69	49.20	Myb-related protein 306 OS=Antirrhinum majus OX=4151 GN=MYB306 PE=2 SV=1	[more]
Q9SCU7	4.9e-66	44.98	Transcription factor MYB30 OS=Arabidopsis thaliana OX=3702 GN=MYB30 PE=1 SV=1	[more]
Q9SN78	1.6e-64	43.70	Transcription factor MYB94 OS=Arabidopsis thaliana OX=3702 GN=MYB94 PE=1 SV=1	[more]

BLAST of CmoCh14G004790.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F299	4.6e-160	100.00	myb-related protein 306-like OS=Cucurbita moschata OX=3662 GN=LOC111441492 PE=4 ...	[more]
A0A6J1J977	9.0e-148	93.14	myb-related protein 306-like OS=Cucurbita maxima OX=3661 GN=LOC111482431 PE=4 SV...	[more]
A0A6J1FN82	6.7e-127	81.82	myb-related protein 306-like OS=Cucurbita moschata OX=3662 GN=LOC111445454 PE=4 ...	[more]
A0A6J1I7Y7	3.3e-126	81.47	myb-related protein 306-like OS=Cucurbita maxima OX=3661 GN=LOC111470014 PE=4 SV...	[more]
A0A6J1DEU8	2.9e-122	77.52	myb-related protein 306-like OS=Momordica charantia OX=3673 GN=LOC111019849 PE=4...	[more]

BLAST of CmoCh14G004790.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08810.1	5.9e-83	57.59	myb domain protein 60	[more]
AT3G28910.1	3.5e-67	44.98	myb domain protein 30	[more]
AT3G47600.1	1.1e-65	43.70	myb domain protein 94	[more]
AT1G74650.1	1.9e-65	43.98	myb domain protein 31	[more]
AT5G62470.2	2.0e-62	42.18	myb domain protein 96	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 66..114 e-value: 5.5E-12 score: 55.8 coord: 13..63 e-value: 2.4E-14 score: 63.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 62..112 score: 9.465514
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..61 score: 11.323498
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..61 e-value: 3.87783E-11 score: 54.889
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 69..112 e-value: 2.92635E-8 score: 47.185
None	No IPR available	GENE3D	1.10.10.60		coord: 13..66 e-value: 8.8E-19 score: 69.2
None	No IPR available	GENE3D	1.10.10.60		coord: 68..133 e-value: 2.7E-20 score: 74.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..142
None	No IPR available	PANTHER	PTHR10641	MYB FAMILY TRANSCRIPTION FACTOR	coord: 1..266
None	No IPR available	PANTHER	PTHR10641:SF1152	TRANSCRIPTION FACTOR MYB60	coord: 1..266
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 67..112 e-value: 5.9E-12 score: 45.6 coord: 14..61 e-value: 9.2E-15 score: 54.6
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..65 score: 25.0748
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 66..116 score: 19.815649
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..108

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh14G004790	CmoCh14G004790	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh14G004790.1:exon:3645	CmoCh14G004790.1:exon:3645	exon
CmoCh14G004790.1:exon:3646	CmoCh14G004790.1:exon:3646	exon
CmoCh14G004790.1:exon:3647	CmoCh14G004790.1:exon:3647	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh14G004790.1:five_prime_utr	CmoCh14G004790.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh14G004790.1:cds	CmoCh14G004790.1:cds	CDS
CmoCh14G004790.1:cds	CmoCh14G004790.1:cds_2	CDS
CmoCh14G004790.1:cds	CmoCh14G004790.1:cds_3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh14G004790.1:three_prime_utr	CmoCh14G004790.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh14G004790.1	CmoCh14G004790.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin